Cp4.1LG14g08850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCATGAATTCTTCCTCTCACTCACAAACCAAAGAAGTTCTCCAAGATGCGTGGGACTACAAAGGCCGCCCGGCCGAGCGCTCGAAGACCGGCCGCTGGACCGCAGCTGCCATGATTCTCGGTCTCTCTCAAACACTTCTATGTTCCCGTTATTTTTGAATCGTAATAACCGTTGGATGTAGCCGAAGACGAGTCGAAAAAGTAAAGTTTTGTTCTTATTGGTTTGATTTTTCAGGAGGTGAGGCTGTAGAGAGGCTAACAACACTAGGAATTGCAGTGAATTTGGTGACATATTTGACTGGAACCATGCATTTGGGGAATGCCACTTCTGCTAATACTGTCACCAATTTCCTTGGCACTTCCTTCATGCTTTGTCTTCTTGGTGGTTTCATTGCTGATACCTTTCTTGGCAGGTTC CCATGAATTCTTCCTCTCACTCACAAACCAAAGAAGTTCTCCAAGATGCGTGGGACTACAAAGGCCGCCCGGCCGAGCGCTCGAAGACCGGCCGCTGGACCGCAGCTGCCATGATTCTCGGTCTCTCTCAAACACTTCTATGTTCCCGAGGTGAGGCTGTAGAGAGGCTAACAACACTAGGAATTGCAGTGAATTTGGTGACATATTTGACTGGAACCATGCATTTGGGGAATGCCACTTCTGCTAATACTGTCACCAATTTCCTTGGCACTTCCTTCATGCTTTGTCTTCTTGGTGGTTTCATTGCTGATACCTTTCTTGGCAGGTTC ATGAATTCTTCCTCTCACTCACAAACCAAAGAAGTTCTCCAAGATGCGTGGGACTACAAAGGCCGCCCGGCCGAGCGCTCGAAGACCGGCCGCTGGACCGCAGCTGCCATGATTCTCGGTCTCTCTCAAACACTTCTATGTTCCCGAGGTGAGGCTGTAGAGAGGCTAACAACACTAGGAATTGCAGTGAATTTGGTGACATATTTGACTGGAACCATGCATTTGGGGAATGCCACTTCTGCTAATACTGTCACCAATTTCCTTGGCACTTCCTTCATGCTTTGTCTTCTTGGTGGTTTCATTGCTGATACCTTTCTTGGCAGGTTC MNSSSHSQTKEVLQDAWDYKGRPAERSKTGRWTAAAMILGLSQTLLCSRGEAVERLTTLGIAVNLVTYLTGTMHLGNATSANTVTNFLGTSFMLCLLGGFIADTFLGRF Homology
BLAST of Cp4.1LG14g08850 vs. ExPASy Swiss-Prot
Match: Q05085 (Protein NRT1/ PTR FAMILY 6.3 OS=Arabidopsis thaliana OX=3702 GN=NPF6.3 PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 6.7e-35 Identity = 77/107 (71.96%), Postives = 89/107 (83.18%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. ExPASy Swiss-Prot
Match: Q9SZY4 (Protein NRT1/ PTR FAMILY 6.2 OS=Arabidopsis thaliana OX=3702 GN=NPF6.2 PE=1 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.8e-27 Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. ExPASy Swiss-Prot
Match: Q9LVE0 (Protein NRT1/ PTR FAMILY 6.4 OS=Arabidopsis thaliana OX=3702 GN=NPF6.4 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 6.7e-19 Identity = 52/107 (48.60%), Postives = 71/107 (66.36%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. ExPASy Swiss-Prot
Match: Q9M390 (Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana OX=3702 GN=NPF8.1 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-12 Identity = 41/92 (44.57%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. ExPASy Swiss-Prot
Match: Q0WSZ6 (Protein NRT1/ PTR FAMILY 5.13 OS=Arabidopsis thaliana OX=3702 GN=NPF5.13 PE=2 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 7.9e-12 Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. NCBI nr
Match: KAG6577622.1 (Protein NRT1/ PTR FAMILY 6.3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189 bits (480), Expect = 4.29e-55 Identity = 99/109 (90.83%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. NCBI nr
Match: XP_023007754.1 (protein NRT1/ PTR FAMILY 6.3-like [Cucurbita maxima]) HSP 1 Score: 189 bits (480), Expect = 1.22e-54 Identity = 99/109 (90.83%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. NCBI nr
Match: XP_023551869.1 (protein NRT1/ PTR FAMILY 6.3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551870.1 protein NRT1/ PTR FAMILY 6.3-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 189 bits (480), Expect = 1.24e-54 Identity = 99/109 (90.83%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. NCBI nr
Match: XP_022923275.1 (protein NRT1/ PTR FAMILY 6.3-like [Cucurbita moschata]) HSP 1 Score: 189 bits (480), Expect = 1.24e-54 Identity = 99/109 (90.83%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. NCBI nr
Match: KAG7015664.1 (Protein NRT1/ PTR FAMILY 6.3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 189 bits (480), Expect = 1.24e-54 Identity = 99/109 (90.83%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. ExPASy TrEMBL
Match: A0A6J1L5V7 (protein NRT1/ PTR FAMILY 6.3-like OS=Cucurbita maxima OX=3661 GN=LOC111500272 PE=3 SV=1) HSP 1 Score: 189 bits (480), Expect = 5.90e-55 Identity = 99/109 (90.83%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. ExPASy TrEMBL
Match: A0A6J1EBB7 (protein NRT1/ PTR FAMILY 6.3-like OS=Cucurbita moschata OX=3662 GN=LOC111431018 PE=3 SV=1) HSP 1 Score: 189 bits (480), Expect = 5.99e-55 Identity = 99/109 (90.83%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. ExPASy TrEMBL
Match: A0A1S3BKQ3 (protein NRT1/ PTR FAMILY 6.3-like OS=Cucumis melo OX=3656 GN=LOC103490905 PE=3 SV=1) HSP 1 Score: 179 bits (454), Expect = 3.77e-51 Identity = 92/109 (84.40%), Postives = 97/109 (88.99%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. ExPASy TrEMBL
Match: E5G6Y6 (Nitrate transporter 1.1 OS=Cucumis sativus OX=3659 GN=Csa_3G027720 PE=2 SV=1) HSP 1 Score: 177 bits (448), Expect = 2.80e-50 Identity = 91/109 (83.49%), Postives = 96/109 (88.07%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. ExPASy TrEMBL
Match: A0A6J1KSV3 (protein NRT1/ PTR FAMILY 6.3-like OS=Cucurbita maxima OX=3661 GN=LOC111498366 PE=3 SV=1) HSP 1 Score: 168 bits (426), Expect = 4.30e-47 Identity = 88/108 (81.48%), Postives = 93/108 (86.11%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. TAIR 10
Match: AT1G12110.1 (nitrate transporter 1.1 ) HSP 1 Score: 147.9 bits (372), Expect = 4.7e-36 Identity = 77/107 (71.96%), Postives = 89/107 (83.18%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. TAIR 10
Match: AT2G26690.1 (Major facilitator superfamily protein ) HSP 1 Score: 123.2 bits (308), Expect = 1.2e-28 Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. TAIR 10
Match: AT3G21670.1 (Major facilitator superfamily protein ) HSP 1 Score: 94.7 bits (234), Expect = 4.8e-20 Identity = 52/107 (48.60%), Postives = 71/107 (66.36%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. TAIR 10
Match: AT3G54140.1 (peptide transporter 1 ) HSP 1 Score: 73.9 bits (180), Expect = 8.7e-14 Identity = 41/92 (44.57%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of Cp4.1LG14g08850 vs. TAIR 10
Match: AT1G72125.1 (Major facilitator superfamily protein ) HSP 1 Score: 71.2 bits (173), Expect = 5.6e-13 Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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