Cp4.1LG14g08610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g08610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Calcium-binding EF-hand family protein
Location	Cp4.1LG14: 7143419 .. 7143862 (-)
RNA-Seq Expression	Cp4.1LG14g08610
Synteny	Cp4.1LG14g08610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAAGATCTGAGCGATGAACAGAAATCCTCCATGAAAGAGGCCTTTACCCTCTTCGATTCCGACGGCGATGGACGGATCGCCCCATCGGAGCTCGGGATTCTAATGCGTTCCCTCGGCGGAAACCCCACTCAAGCCCAACTCAAAGCCATTATCGCTGAGGAGAATCTCACTGCTCCTTTTGATTTCAATCGATTTCTTGAGATCATGTCCAAGCACATGAAGCATGAGCCCTTCGATCGCCAGCTTCGAGACGCCTTTAAGGTTCTCGATAAAGAGAACACCGGTTACGTCCTGGTCTCGGAGCTCCGACACATTTTGACGAGTATTGGTGAGAAGCTTGAGCCGTCGGAGTTTGATGAGTGGATTCGAGAAGTTGAGGTCGGACCGGATGGTAAAATTCGGTATGAGGATTTCATTGCTCGAATGGTGGCCAAATGA

mRNA sequence

ATGGGCAAAGATCTGAGCGATGAACAGAAATCCTCCATGAAAGAGGCCTTTACCCTCTTCGATTCCGACGGCGATGGACGGATCGCCCCATCGGAGCTCGGGATTCTAATGCGTTCCCTCGGCGGAAACCCCACTCAAGCCCAACTCAAAGCCATTATCGCTGAGGAGAATCTCACTGCTCCTTTTGATTTCAATCGATTTCTTGAGATCATGTCCAAGCACATGAAGCATGAGCCCTTCGATCGCCAGCTTCGAGACGCCTTTAAGGTTCTCGATAAAGAGAACACCGGTTACGTCCTGGTCTCGGAGCTCCGACACATTTTGACGAGTATTGGTGAGAAGCTTGAGCCGTCGGAGTTTGATGAGTGGATTCGAGAAGTTGAGGTCGGACCGGATGGTAAAATTCGGTATGAGGATTTCATTGCTCGAATGGTGGCCAAATGA

Coding sequence (CDS)

ATGGGCAAAGATCTGAGCGATGAACAGAAATCCTCCATGAAAGAGGCCTTTACCCTCTTCGATTCCGACGGCGATGGACGGATCGCCCCATCGGAGCTCGGGATTCTAATGCGTTCCCTCGGCGGAAACCCCACTCAAGCCCAACTCAAAGCCATTATCGCTGAGGAGAATCTCACTGCTCCTTTTGATTTCAATCGATTTCTTGAGATCATGTCCAAGCACATGAAGCATGAGCCCTTCGATCGCCAGCTTCGAGACGCCTTTAAGGTTCTCGATAAAGAGAACACCGGTTACGTCCTGGTCTCGGAGCTCCGACACATTTTGACGAGTATTGGTGAGAAGCTTGAGCCGTCGGAGTTTGATGAGTGGATTCGAGAAGTTGAGGTCGGACCGGATGGTAAAATTCGGTATGAGGATTTCATTGCTCGAATGGTGGCCAAATGA

Protein sequence

MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEFDEWIREVEVGPDGKIRYEDFIARMVAK

Homology

[Close]

BLAST of Cp4.1LG14g08610 vs. ExPASy Swiss-Prot
Match: Q94AZ4 (Probable calcium-binding protein CML13 OS=Arabidopsis thaliana OX=3702 GN=CML13 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.6e-66
Identity = 124/148 (83.78%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MGKD-LSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           MGKD LSD+Q SSMKEAF LFD+DGDG+IAPSELGILMRSLGGNPTQAQLK+IIA ENL+
Sbjct: 1   MGKDGLSDDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIASENLS 60

Query: 61  APFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSE 120
           +PFDFNRFL++M+KH+K EPFDRQLRDAFKVLDKE TG+V V++LRHILTSIGEKLEP+E
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNE 120

Query: 121 FDEWIREVEVGPDGKIRYEDFIARMVAK 148
           FDEWI+EV+VG DGKIRYEDFIARMVAK
Sbjct: 121 FDEWIKEVDVGSDGKIRYEDFIARMVAK 148

[Close]

BLAST of Cp4.1LG14g08610 vs. ExPASy Swiss-Prot
Match: Q8VZ50 (Probable calcium-binding protein CML14 OS=Arabidopsis thaliana OX=3702 GN=CML14 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.2e-64
Identity = 119/148 (80.41%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 1   MGKD-LSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           M KD LS++Q SSMKEAF LFD+DGDG+IAPSELGILMRSLGGNPT++QLK+II  ENL+
Sbjct: 1   MSKDGLSNDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTESQLKSIITTENLS 60

Query: 61  APFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSE 120
           +PFDFNRFL++M+KH+K EPFDRQLRDAFKVLDKE TG+V V++LRHILTSIGEKL+PSE
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLQPSE 120

Query: 121 FDEWIREVEVGPDGKIRYEDFIARMVAK 148
           FDEWI+EV+VG DGKIRYEDFIARMVAK
Sbjct: 121 FDEWIKEVDVGSDGKIRYEDFIARMVAK 148

[Close]

BLAST of Cp4.1LG14g08610 vs. ExPASy Swiss-Prot
Match: Q84VG0 (Probable calcium-binding protein CML7 OS=Oryza sativa subsp. japonica OX=39947 GN=CML7 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.5e-58
Identity = 108/146 (73.97%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 2   GKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTAP 61
           GK+LS+EQ +SM+EAF+LFD+DGDGRIAPSELG+LMRSLGGNPTQAQL+ I A+E LTAP
Sbjct: 3   GKELSEEQVASMREAFSLFDTDGDGRIAPSELGVLMRSLGGNPTQAQLRDIAAQEKLTAP 62

Query: 62  FDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEFD 121
           FDF RFL++M  H++ EPFDR LRDAF+VLDK+ +G V V++LRH+LTSIGEKLEP EFD
Sbjct: 63  FDFPRFLDLMRAHLRPEPFDRPLRDAFRVLDKDASGTVSVADLRHVLTSIGEKLEPHEFD 122

Query: 122 EWIREVEVGPDGKIRYEDFIARMVAK 148
           EWIREV+V PDG IRY+DFI R+VAK
Sbjct: 123 EWIREVDVAPDGTIRYDDFIRRIVAK 148

[Close]

BLAST of Cp4.1LG14g08610 vs. ExPASy Swiss-Prot
Match: P84339 (Calmodulin OS=Agaricus bisporus OX=5341 PE=1 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-34
Identity = 72/149 (48.32%), Postives = 102/149 (68.46%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   LS+EQ S  KEAF+LFD DGDG I   ELG +MRSLG NP+QA+L+ +I E +   
Sbjct: 1   MADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADG 60

Query: 61  TAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ M+    + ++++AFKV DK+  GY+  +ELRH++T++GEKL  S
Sbjct: 61  NGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDS 120

Query: 121 EFDEWIREVEVGPDGKIRYEDFIARMVAK 148
           E DE IRE +V  DG+I YE+F+  M++K
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKMMLSK 149

[Close]

BLAST of Cp4.1LG14g08610 vs. ExPASy Swiss-Prot
Match: P13868 (Calmodulin-1 OS=Solanum tuberosum OX=4113 GN=PCM1 PE=1 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-34
Identity = 69/149 (46.31%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M + L++EQ +  KEAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I+E +   
Sbjct: 1   MAEQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEADADQ 60

Query: 61  TAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ MK    + +L++AFKV DK+  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EFDEWIREVEVGPDGKIRYEDFIARMVAK 148
           E DE IRE ++  DG++ YE+F+  M+AK
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVRMMLAK 149

[Close]

BLAST of Cp4.1LG14g08610 vs. NCBI nr
Match: XP_022923443.1 (probable calcium-binding protein CML13 [Cucurbita moschata] >XP_022923444.1 probable calcium-binding protein CML13 [Cucurbita moschata] >XP_023553502.1 probable calcium-binding protein CML13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293 bits (751), Expect = 4.03e-100
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA
Sbjct: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147
           DEWIREVEVGPDGKIRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147

[Close]

BLAST of Cp4.1LG14g08610 vs. NCBI nr
Match: KAG6577598.1 (putative calcium-binding protein CML13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015647.1 putative calcium-binding protein CML13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291 bits (746), Expect = 2.33e-99
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEE+LTA
Sbjct: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEESLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147
           DEWIREVEVGPDGKIRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147

[Close]

BLAST of Cp4.1LG14g08610 vs. NCBI nr
Match: XP_022965210.1 (probable calcium-binding protein CML13 [Cucurbita maxima])

HSP 1 Score: 290 bits (743), Expect = 6.69e-99
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA
Sbjct: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
            FDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF
Sbjct: 61  SFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147
           DEWIREVEVGPDGKIRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147

[Close]

BLAST of Cp4.1LG14g08610 vs. NCBI nr
Match: XP_038876882.1 (probable calcium-binding protein CML13 [Benincasa hispida])

HSP 1 Score: 281 bits (718), Expect = 4.35e-95
Identity = 140/147 (95.24%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSD+QKSSM+EAFTLFD+DGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFLEIMSKHMK EPFDRQLRDAFKVLDK+NTGYVLVSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLEIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147
           DEWIREVEVG DG+IRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGSDGRIRYEDFIARMVAK 147

[Close]

BLAST of Cp4.1LG14g08610 vs. NCBI nr
Match: XP_023540891.1 (probable calcium-binding protein CML13 [Cucurbita pepo subsp. pepo] >KAG6596839.1 putative calcium-binding protein CML13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028366.1 putative calcium-binding protein CML13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280 bits (716), Expect = 8.78e-95
Identity = 140/147 (95.24%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLS++QKSSM+EAFTLFD+DGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA
Sbjct: 1   MGKDLSNDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFLEIMSKHMK E FDRQLRDAFKVLDK+NTGYVLVSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLEIMSKHMKPESFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147
           DEWIREVEVGPDGKIRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147

[Close]

BLAST of Cp4.1LG14g08610 vs. ExPASy TrEMBL
Match: A0A6J1E9N4 (probable calcium-binding protein CML13 OS=Cucurbita moschata OX=3662 GN=LOC111431138 PE=4 SV=1)

HSP 1 Score: 293 bits (751), Expect = 1.95e-100
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA
Sbjct: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147
           DEWIREVEVGPDGKIRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147

[Close]

BLAST of Cp4.1LG14g08610 vs. ExPASy TrEMBL
Match: A0A6J1HN38 (probable calcium-binding protein CML13 OS=Cucurbita maxima OX=3661 GN=LOC111465135 PE=4 SV=1)

HSP 1 Score: 290 bits (743), Expect = 3.24e-99
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA
Sbjct: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
            FDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF
Sbjct: 61  SFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147
           DEWIREVEVGPDGKIRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147

[Close]

BLAST of Cp4.1LG14g08610 vs. ExPASy TrEMBL
Match: A0A6J1L2L8 (probable calcium-binding protein CML13 OS=Cucurbita maxima OX=3661 GN=LOC111498532 PE=4 SV=1)

HSP 1 Score: 279 bits (713), Expect = 1.22e-94
Identity = 139/147 (94.56%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLS++QKSSM+EAFTLFD+DGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT+
Sbjct: 1   MGKDLSNDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFLEIMSKHMK E FDRQLRDAFKVLDK+NTGYVLVSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLEIMSKHMKPESFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147
           DEWIREVEVGPDGKIRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147

[Close]

BLAST of Cp4.1LG14g08610 vs. ExPASy TrEMBL
Match: A0A6J1FT67 (probable calcium-binding protein CML13 OS=Cucurbita moschata OX=3662 GN=LOC111448243 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 3.50e-94
Identity = 139/147 (94.56%), Postives = 144/147 (97.96%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLS++QKSSM+EAFTLFD+DGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA
Sbjct: 1   MGKDLSNDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDF RFLEIMSKHMK E FDRQLRDAFKVLDK+NTGYVLVSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFTRFLEIMSKHMKPESFDRQLRDAFKVLDKDNTGYVLVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147
           DEWIREVEVGPDGKIRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147

[Close]

BLAST of Cp4.1LG14g08610 vs. ExPASy TrEMBL
Match: A0A0A0L2F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036390 PE=4 SV=1)

HSP 1 Score: 275 bits (704), Expect = 2.88e-93
Identity = 137/147 (93.20%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTA 60
           MGKDLSD+QKSSM+EAFTLFD+DGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT+
Sbjct: 1   MGKDLSDDQKSSMREAFTLFDTDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLTS 60

Query: 61  PFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSEF 120
           PFDFNRFL+IMSKHMK EPFDRQLRDAFKVLDK+NTGYV VSELRHILTSIGEKLEPSEF
Sbjct: 61  PFDFNRFLDIMSKHMKPEPFDRQLRDAFKVLDKDNTGYVRVSELRHILTSIGEKLEPSEF 120

Query: 121 DEWIREVEVGPDGKIRYEDFIARMVAK 147
           DEWIREVEVG DG IRYEDFIARMVAK
Sbjct: 121 DEWIREVEVGSDGSIRYEDFIARMVAK 147

[Close]

BLAST of Cp4.1LG14g08610 vs. TAIR 10
Match: AT1G12310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 252.7 bits (644), Expect = 1.8e-67
Identity = 124/148 (83.78%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MGKD-LSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           MGKD LSD+Q SSMKEAF LFD+DGDG+IAPSELGILMRSLGGNPTQAQLK+IIA ENL+
Sbjct: 1   MGKDGLSDDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSIIASENLS 60

Query: 61  APFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSE 120
           +PFDFNRFL++M+KH+K EPFDRQLRDAFKVLDKE TG+V V++LRHILTSIGEKLEP+E
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNE 120

Query: 121 FDEWIREVEVGPDGKIRYEDFIARMVAK 148
           FDEWI+EV+VG DGKIRYEDFIARMVAK
Sbjct: 121 FDEWIKEVDVGSDGKIRYEDFIARMVAK 148

[Close]

BLAST of Cp4.1LG14g08610 vs. TAIR 10
Match: AT1G62820.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 244.2 bits (622), Expect = 6.5e-65
Identity = 119/148 (80.41%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 1   MGKD-LSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENLT 60
           M KD LS++Q SSMKEAF LFD+DGDG+IAPSELGILMRSLGGNPT++QLK+II  ENL+
Sbjct: 1   MSKDGLSNDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTESQLKSIITTENLS 60

Query: 61  APFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPSE 120
           +PFDFNRFL++M+KH+K EPFDRQLRDAFKVLDKE TG+V V++LRHILTSIGEKL+PSE
Sbjct: 61  SPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLQPSE 120

Query: 121 FDEWIREVEVGPDGKIRYEDFIARMVAK 148
           FDEWI+EV+VG DGKIRYEDFIARMVAK
Sbjct: 121 FDEWIKEVDVGSDGKIRYEDFIARMVAK 148

[Close]

BLAST of Cp4.1LG14g08610 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 145.2 bits (365), Expect = 4.1e-35
Identity = 72/149 (48.32%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L+DEQ S  KEAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E +   
Sbjct: 1   MADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  TAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M+K MK    + +L++AF+V DK+  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EFDEWIREVEVGPDGKIRYEDFIARMVAK 148
           E +E IRE +V  DG+I YE+F+  M+AK
Sbjct: 121 EVEEMIREADVDGDGQINYEEFVKIMMAK 149

[Close]

BLAST of Cp4.1LG14g08610 vs. TAIR 10
Match: AT5G37780.1 (calmodulin 1 )

HSP 1 Score: 145.2 bits (365), Expect = 4.1e-35
Identity = 72/149 (48.32%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L+DEQ S  KEAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E +   
Sbjct: 1   MADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  TAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M+K MK    + +L++AF+V DK+  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EFDEWIREVEVGPDGKIRYEDFIARMVAK 148
           E +E IRE +V  DG+I YE+F+  M+AK
Sbjct: 121 EVEEMIREADVDGDGQINYEEFVKIMMAK 149

[Close]

BLAST of Cp4.1LG14g08610 vs. TAIR 10
Match: AT5G21274.1 (calmodulin 6 )

HSP 1 Score: 144.8 bits (364), Expect = 5.4e-35
Identity = 71/149 (47.65%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 1   MGKDLSDEQKSSMKEAFTLFDSDGDGRIAPSELGILMRSLGGNPTQAQLKAIIAEENL-- 60
           M   L+D+Q S  KEAF+LFD DGDG I   ELG +MRSLG NPT+A+L+ +I E +   
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  TAPFDFNRFLEIMSKHMKHEPFDRQLRDAFKVLDKENTGYVLVSELRHILTSIGEKLEPS 120
               DF  FL +M++ MK    + +L++AF+V DK+  G++  +ELRH++T++GEKL   
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDE 120

Query: 121 EFDEWIREVEVGPDGKIRYEDFIARMVAK 148
           E DE IRE +V  DG+I YE+F+  M+AK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g08610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AZ4	2.6e-66	83.78	Probable calcium-binding protein CML13 OS=Arabidopsis thaliana OX=3702 GN=CML13 ...	[more]
Q8VZ50	9.2e-64	80.41	Probable calcium-binding protein CML14 OS=Arabidopsis thaliana OX=3702 GN=CML14 ...	[more]
Q84VG0	1.5e-58	73.97	Probable calcium-binding protein CML7 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
P84339	2.0e-34	48.32	Calmodulin OS=Agaricus bisporus OX=5341 PE=1 SV=2	[more]
P13868	2.6e-34	46.31	Calmodulin-1 OS=Solanum tuberosum OX=4113 GN=PCM1 PE=1 SV=2	[more]

BLAST of Cp4.1LG14g08610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923443.1	4.03e-100	100.00	probable calcium-binding protein CML13 [Cucurbita moschata] >XP_022923444.1 prob...	[more]
KAG6577598.1	2.33e-99	99.32	putative calcium-binding protein CML13, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022965210.1	6.69e-99	99.32	probable calcium-binding protein CML13 [Cucurbita maxima]	[more]
XP_038876882.1	4.35e-95	95.24	probable calcium-binding protein CML13 [Benincasa hispida]	[more]
XP_023540891.1	8.78e-95	95.24	probable calcium-binding protein CML13 [Cucurbita pepo subsp. pepo] >KAG6596839....	[more]

BLAST of Cp4.1LG14g08610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E9N4	1.95e-100	100.00	probable calcium-binding protein CML13 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1HN38	3.24e-99	99.32	probable calcium-binding protein CML13 OS=Cucurbita maxima OX=3661 GN=LOC1114651...	[more]
A0A6J1L2L8	1.22e-94	94.56	probable calcium-binding protein CML13 OS=Cucurbita maxima OX=3661 GN=LOC1114985...	[more]
A0A6J1FT67	3.50e-94	94.56	probable calcium-binding protein CML13 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A0A0L2F2	2.88e-93	93.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036390 PE=4 SV=1	[more]

BLAST of Cp4.1LG14g08610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12310.1	1.8e-67	83.78	Calcium-binding EF-hand family protein	[more]
AT1G62820.1	6.5e-65	80.41	Calcium-binding EF-hand family protein	[more]
AT1G66410.1	4.1e-35	48.32	calmodulin 4	[more]
AT5G37780.1	4.1e-35	48.32	calmodulin 1	[more]
AT5G21274.1	5.4e-35	47.65	calmodulin 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 119..147 e-value: 6.9 score: 11.0 coord: 12..40 e-value: 3.0E-4 score: 30.1 coord: 83..111 e-value: 0.013 score: 24.7
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 13..41 e-value: 9.3E-6 score: 25.1
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 82..144 e-value: 3.7E-12 score: 46.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 79..114 score: 11.082272
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 8..43 score: 12.811786
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 14..72 e-value: 1.55185E-8 score: 46.3869
None	No IPR available	GENE3D	1.10.238.10		coord: 81..145 e-value: 5.4E-18 score: 66.9
None	No IPR available	GENE3D	1.10.238.10		coord: 3..80 e-value: 8.5E-21 score: 75.9
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 1..147
None	No IPR available	PANTHER	PTHR23050:SF412	SUBFAMILY NOT NAMED	coord: 1..147
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 21..33
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 5..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g08610.1	Cp4.1LG14g08610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding