Homology
BLAST of Cp4.1LG14g07500 vs. ExPASy Swiss-Prot
Match:
Q9FJ79 (DNA topoisomerase 1 beta OS=Arabidopsis thaliana OX=3702 GN=TOP1B PE=1 SV=1)
HSP 1 Score: 1026.9 bits (2654), Expect = 1.3e-298
Identity = 569/944 (60.28%), Postives = 689/944 (72.99%), Query Frame = 0
Query: 1 MAVETFGKAPM------FDDDDEDNMPIVFKRSS-----ASRQNQLNSEVKHSQSQRLNQ 60
MA E F K + ++D+DED++P+VFKR+S +R + +N+ +++S
Sbjct: 1 MATEAFVKPVVPNGHDGYEDEDEDDIPLVFKRNSNTAATTNRPSPINNAMRNSAI----- 60
Query: 61 LSGRPGSDACSANGQS--SNAQKRMTSLPKTSPMRPEI-GSQKASKSSIQEPLVKSLGTT 120
GS S +S ++ + +S ++S M+P + S +S+++ PL
Sbjct: 61 -----GSTKSSPPMRSPLTSPNRSASSSTRSSMMKPALPSSSSVQRSTLKSPLRDDRSVV 120
Query: 121 LKVSDSMDSRPKQLANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPT- 180
K + P D+ DSEDDKPLS RLK +S +K P +
Sbjct: 121 AKERNGFGKAPSV--------------SKSDDEDSEDDKPLSARLKLDSKEVTKQPSSSG 180
Query: 181 -------VQKNKIKKSSEDS-------DDEVPLSSKFQMKSASGVLGGRQHGFDEKKPLD 240
VQK+ ++ D+ P+SS Q K++ G + ++K+PL
Sbjct: 181 RGSTQQAVQKSNMRPQGLSDYTKKKVLDERAPMSSTVQTKTSVGTSSSKPVHIEQKRPLV 240
Query: 241 SKVHQNG---STSRDKLQKPAVVSSKRPLPNADSHSSSQISSKKPKLS------------ 300
+ + +NG T Q PA KRPL SS+Q S K+PKLS
Sbjct: 241 NNIDRNGLKPKTEGHSSQAPA----KRPLEKGS--SSNQSSVKRPKLSEPARPVKVEQGS 300
Query: 301 -------------DSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAAVNKSSGSKKT 360
D+S PL N ++ K++ +D DDH+PI+ RMK ++ NKSS +K +
Sbjct: 301 HISATQDAKGKNLDASKPLRANQATV--KEDNSDGDDHVPIASRMKSDSSNNKSSSAKPS 360
Query: 361 VSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQTHG 420
SK+ +SS + +K K VK SKY KS+K LP SGDGQKKW TL HNGVIFPPPY+ HG
Sbjct: 361 SSKMIASSSRTIAQKPNKWVKDSKYSKSSKSLP-SGDGQKKWKTLQHNGVIFPPPYKRHG 420
Query: 421 VKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQNLDD 480
VKIL +GKPVDLTPEQEEVATMFAVM++T+Y +KPKF+ENFWNDWRKLLGKNH+I++LDD
Sbjct: 421 VKILFQGKPVDLTPEQEEVATMFAVMRETEYYKKPKFRENFWNDWRKLLGKNHMIKSLDD 480
Query: 481 CDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPG 540
CDFTPIY+WY EKE KKQMT EEK+ +KEEKLKQEEKYMWA+LDGV+E++GNFRVEPPG
Sbjct: 481 CDFTPIYEWYMQEKETKKQMTAEEKRIVKEEKLKQEEKYMWAVLDGVRERIGNFRVEPPG 540
Query: 541 LFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAFWND 600
LFRGRGEHPKMGKLKKRIRP DITINIGK+APIPECPIPG+RWKEV+HDNTVTWLAFW+D
Sbjct: 541 LFRGRGEHPKMGKLKKRIRPCDITINIGKEAPIPECPIPGERWKEVKHDNTVTWLAFWSD 600
Query: 601 PINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQIAV 660
PINPKEFKYVFLAASSSLKGQSDKEKYEKAR L ++I +IR +YTKDF +KD T+RQIAV
Sbjct: 601 PINPKEFKYVFLAASSSLKGQSDKEKYEKARKLHNHIGSIRAAYTKDFNNKDVTKRQIAV 660
Query: 661 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEV 720
ATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN L+F+FLGKDSI+Y NTVEV
Sbjct: 661 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEV 720
Query: 721 ELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLN 780
E V+KAI QFQ+GKS +DDLFD+LDTSKLN HLK+LM GLTAKVFRTYNASITLD ML+
Sbjct: 721 EPLVYKAIGQFQAGKSKTDDLFDELDTSKLNTHLKELMAGLTAKVFRTYNASITLDLMLS 780
Query: 781 RGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKELKID 840
+ T+DG+V EK+V YQ ANKEVAIICNHQRTVSKSHGAQ+ +L KI ELR+ +KEL ID
Sbjct: 781 KETRDGDVPEKVVVYQQANKEVAIICNHQRTVSKSHGAQVEKLAVKIEELREQIKELNID 840
Query: 841 LDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSK 888
LDRAKKG+ PL GSDGK+KRNLTPEALEKKI QT KIEK+ERDM+TKED+KTVALGTSK
Sbjct: 841 LDRAKKGRTPLMGSDGKRKRNLTPEALEKKIMQTQGKIEKMERDMQTKEDMKTVALGTSK 900
BLAST of Cp4.1LG14g07500 vs. ExPASy Swiss-Prot
Match:
P30181 (DNA topoisomerase 1 alpha OS=Arabidopsis thaliana OX=3702 GN=TOP1A PE=1 SV=1)
HSP 1 Score: 1010.4 bits (2611), Expect = 1.3e-293
Identity = 559/938 (59.59%), Postives = 674/938 (71.86%), Query Frame = 0
Query: 1 MAVETFGKAPMFDD---DDEDNMPIVFKRSS--ASRQNQLNSEVKHSQSQRLNQLSGRPG 60
M ET K P+ D+ D +D+ P+ FKR++ AS NQ S + S++ ++S
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPM-R 60
Query: 61 SDACSANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDS 120
S S NG T KTS ++ + S + S + PL + +T+K +
Sbjct: 61 SPVTSPNG--------TTPSNKTSIVKSSMPSSSSKASPAKSPLRNDMPSTVKDRSQL-- 120
Query: 121 RPKQLANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKS- 180
+ D ++ DSEDD+PLS L GN S + + Q K
Sbjct: 121 ------------QKDQSECKIEHEDSEDDRPLSSILSGNKGPTSSRQVSSPQPEKKNNGD 180
Query: 181 ----------SEDSDDEVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDK 240
++SDDE P+SS F+ K SG+ GG Q DEKKPL K+HQNGST +++
Sbjct: 181 RPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKNE 240
Query: 241 LQKPAVVSSKRPLPNADSHSSSQISSKKPKLSDSSTPLSTNTV--------------SLK 300
+ V+ KRPL S S + K S +S + ++V +K
Sbjct: 241 VPNGKVL-GKRPLEKNSSADQSSLKKAKISASPTSVKMKQDSVKKEIDDKGRVLVSPKMK 300
Query: 301 AKQEVA-------DDDDHIPISQRMKMSAAVNKSSGSKKTVSKVASSS------------ 360
AKQ DDDD +PIS+R K ++ + +S +K K+ S+S
Sbjct: 301 AKQLSTREDGTDDDDDDDVPISKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKARNVVS 360
Query: 361 --IKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQTHGVKILHK 420
+ K +KK K SKY S+K PSSGDGQKKWTTLVHNGVIFPPPY+ HG+KIL+K
Sbjct: 361 PRSRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGVIFPPPYKPHGIKILYK 420
Query: 421 GKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQNLDDCDFTPI 480
GKPVDLT EQEEVATMFAVM++TDY KP+F+ENFWNDWR+LLGK HVIQ LDDCDFTPI
Sbjct: 421 GKPVDLTIEQEEVATMFAVMRETDYYTKPQFRENFWNDWRRLLGKKHVIQKLDDCDFTPI 480
Query: 481 YDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGLFRGRG 540
Y+W+ EKEKKKQM+TEEKKALKEEK+KQEEKYMWA++DGVKEK+GNFRVEPPGLFRGRG
Sbjct: 481 YEWHLEEKEKKKQMSTEEKKALKEEKMKQEEKYMWAVVDGVKEKIGNFRVEPPGLFRGRG 540
Query: 541 EHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAFWNDPINPKE 600
EHPKMGKLKKRI P +IT+NIGK APIPECPI G+RWKEV+HDNTVTWLAFW DPINPKE
Sbjct: 541 EHPKMGKLKKRIHPCEITLNIGKGAPIPECPIAGERWKEVKHDNTVTWLAFWADPINPKE 600
Query: 601 FKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQIAVATYLID 660
FKYVFL A SSLKG SDKEKYEKAR L D+I NIR +YTK+FT+KD RQIAVATYLID
Sbjct: 601 FKYVFLGAGSSLKGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVATYLID 660
Query: 661 KLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVELPVFK 720
KLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE V+K
Sbjct: 661 KLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVEPLVYK 720
Query: 721 AITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKDG 780
AI QFQ+GKS +DDLFD+LDTSKLNAHLK+L+PGLTAKVFRTYNASITLD+ML++ TKDG
Sbjct: 721 AIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQETKDG 780
Query: 781 EVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKELKIDLDRAKK 840
+V++KIV YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL++++KELK +LDRAKK
Sbjct: 781 DVTQKIVVYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNLDRAKK 840
Query: 841 GKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDP 888
GKPPL+GSDGK+ R+L P A EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKINYLDP
Sbjct: 841 GKPPLEGSDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDP 900
BLAST of Cp4.1LG14g07500 vs. ExPASy Swiss-Prot
Match:
P93119 (DNA topoisomerase 1 OS=Daucus carota OX=4039 GN=TOP1 PE=2 SV=1)
HSP 1 Score: 832.4 bits (2149), Expect = 4.8e-240
Identity = 487/805 (60.50%), Postives = 573/805 (71.18%), Query Frame = 0
Query: 125 VKEENDSIHPTQDNSDSEDDKPLSIR-----LKGNSNHPSKG-----PIP-TVQKNKIKK 184
+KEE S ++ DS+DDKPLS + L GNS+H G P P T K +I K
Sbjct: 22 LKEEGQS---RSNSEDSDDDKPLSHKLSSGALNGNSHHIRMGSNLSCPSPYTSPKPRIIK 81
Query: 185 SSEDSDDEVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSS 244
E DE+ LSS+ Q+ +G DE KPL S +L+ P+ +
Sbjct: 82 GPE---DEMLLSSELQLN--AGASNAESSDSDESKPLAS-----------ELEDPSSSLN 141
Query: 245 KRPLPNADSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAA 304
KRPL +S SKK KLS+ S P TN A+QE A DD IS R K S
Sbjct: 142 KRPL--IQPKNSDPSPSKKAKLSEPSAP--TNRKLKTAEQEEAAADDDPSISNRNKKSTT 201
Query: 305 VNKSSGSKKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGV 364
SKV+ + + S V SK +K +L +GQ LVHNGV
Sbjct: 202 ---------PASKVSDKKKRPDVSASVNKVDFSKSLKVPLVLVKGRNGQ----PLVHNGV 261
Query: 365 IFPPPYQTHGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLG 424
IFPP Y+ HGVK+L++ PVDLTPEQEEVATMFAVM +T+YM KPKF+ENF +DWRK+LG
Sbjct: 262 IFPPLYKPHGVKMLYRENPVDLTPEQEEVATMFAVMLETEYMTKPKFRENFMSDWRKILG 321
Query: 425 KNHVIQNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLK-QEEKYMWAILDGV-K 484
+ H+IQNL+DCDFTPIY+W+Q EKEKKKQM+T+EKKA+KE K + ++EKYMWA++DG+ +
Sbjct: 322 EKHIIQNLEDCDFTPIYEWHQREKEKKKQMSTDEKKAIKEGKDETRKEKYMWAVVDGMSR 381
Query: 485 EKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPS-DITINIGKDAPIPECPIPGQRWKEVR 544
EKVGNFRV + + K ++KK + DITINIGKDAPIPE PIPG+RWKE+R
Sbjct: 382 EKVGNFRVGTTRVVQRSWRASKDPQVKKNVYSQIDITINIGKDAPIPEPPIPGERWKEIR 441
Query: 545 HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIR-NSYTK 604
HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKG+ +EKYEK+R LKDYI+ IR +YTK
Sbjct: 442 HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGKVTREKYEKSRKLKDYIEGIRAAAYTK 501
Query: 605 DFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNF 664
DF SKD +RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV+ PN+L+F+F
Sbjct: 502 DFASKDSKKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVETKRPNILKFDF 561
Query: 665 LGKDSIKYENTVEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVF 724
LGKDSI+Y+N VEVE VF AI QF+SGK G DDLFD+LDTSKLNAHLK+LMPGLTAKVF
Sbjct: 562 LGKDSIRYQNEVEVEPRVFSAIEQFRSGKEGGDDLFDQLDTSKLNAHLKELMPGLTAKVF 621
Query: 725 RTYNASITLDDM-----LNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMT 784
RTYNASITLD+M L+R TK G+V+EK+V YQHANKEVAIICNHQRTVSKSH AQM
Sbjct: 622 RTYNASITLDEMVRCKLLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMV 681
Query: 785 RLNEKISELRDIVKELKIDLDRAKKGKPPLKGSDGKQKRNLTPE---------------- 844
RLNEKI EL+ ++KEL+ DL R KGKPPLK SDGK KRNL +
Sbjct: 682 RLNEKIEELKGLLKELQEDLTRVNKGKPPLKNSDGKPKRNLNLKRYKGKLLKLIQKLRKW 741
Query: 845 ------ALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVP 888
++ KKI+QTN KIEK+ERD +TKEDLKTVALGTSKINYLDPRITVAWCKRH+VP
Sbjct: 742 SETRRLSVTKKIAQTNTKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHDVP 790
BLAST of Cp4.1LG14g07500 vs. ExPASy Swiss-Prot
Match:
Q54RC3 (DNA topoisomerase 1 OS=Dictyostelium discoideum OX=44689 GN=top1 PE=3 SV=1)
HSP 1 Score: 526.2 bits (1354), Expect = 7.3e-148
Identity = 343/870 (39.43%), Postives = 495/870 (56.90%), Query Frame = 0
Query: 70 KRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQLANAAVKEEN 129
K++T PK +P+ P+ + K I P K + ++ SDS DS ++++ ++
Sbjct: 59 KKLTPTPKPAPVTPKPTAAVNGKKPI--PKKKPVDSS-SDSDSSDSSSDSDSDSS---DS 118
Query: 130 DSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDDEVPLSSKFQ 189
DS + D+S S+ D P + N PS G + KN K ++ + + SK
Sbjct: 119 DSDSSSSDSSSSDSDVPKKKPISKIPNKPS-GTVSKTSKNSPKTTTTTTTTTTTVKSKPA 178
Query: 190 MKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNAD----SHSS 249
K D D + S S + +KP SK+P +
Sbjct: 179 PKVKPEQSSSDDSSSDSS---DDSSDDSSSDSSSEEEKPKKKPSKKPAAVKKEITVKKET 238
Query: 250 SQISSKKPKLSDSSTPLSTNTVSL-KAKQEVADDDDHIPISQRMKMSAAVNKSSGSKKTV 309
+ + K P + T T + K K+E +DDD +KT
Sbjct: 239 TTTTKKTPVKKEVEVKKETKTTTTKKVKKEESDDDGE------------------DEKTT 298
Query: 310 SKVASSSIKKTLKKSKK-PVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQTHG 369
+K +++ K+ LK+ ++ ++ + V D KWTTL+HNG +FPP Y HG
Sbjct: 299 TKKKTTTRKRKLKEEEEGEEEEEEGVNKWWDKEDDEDDGTKWTTLIHNGPVFPPAYVPHG 358
Query: 370 VKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLL--GKNHVIQNL 429
+K ++ GK V LTP+QEEVAT +A +TD+++K FK+NF+ +++ LL + +++ +
Sbjct: 359 IKFMYDGKVVKLTPKQEEVATFYANYLETDHVKKQAFKDNFFKEFKGLLTSEQKEIVKKM 418
Query: 430 DDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVEP 489
D CDF+ I+ +T+KE++K + EEK A EK K +EK+ +A +DG KEKVGN+ +EP
Sbjct: 419 DKCDFSHIHTHLKTKKEQRKARSKEEKDAETAEKKKIQEKHGFATIDGFKEKVGNYMIEP 478
Query: 490 PGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAFW 549
PGLF GRG+HPK G LK+RI PSD+T+NIG+ IP PIPG++WKE+ H+NTVTWLAFW
Sbjct: 479 PGLFLGRGQHPKTGMLKQRIMPSDVTLNIGEGEVIPPSPIPGEKWKEIVHNNTVTWLAFW 538
Query: 550 NDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQI 609
+ +N FKYV+LA SS +KGQ+D++K+E AR LK+ I +IR Y K F + +RQ+
Sbjct: 539 RESVN-GGFKYVWLAPSSKIKGQADRKKFEVARGLKNCIGDIRKGYQKSFNDESTEKRQL 598
Query: 610 AVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTV 669
AVA YLID LALR GNEK +D+ADTVGCC+L+VE++K N + +FLGKDS++Y NTV
Sbjct: 599 AVALYLIDFLALRVGNEKGEDQADTVGCCSLRVEHIKLESNNTITLDFLGKDSMRYLNTV 658
Query: 670 EVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDM 729
++ +K + F GK +D LFD L ++LN HLK M GL+AKVFRTYNASITL
Sbjct: 659 QIREDAYKVLKTFVKGKKPTDLLFDSLTVTQLNNHLKKQMTGLSAKVFRTYNASITLQKE 718
Query: 730 LNR-GTKDGE-VSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKE 789
L++ TK+ + + EKI+ Y N+EVAI+CNHQ+ K+ M++++EKI ELRD+
Sbjct: 719 LDKMDTKEFQSIDEKILFYNRCNREVAILCNHQKAPPKNLAETMSKIDEKIQELRDLQ-- 778
Query: 790 LKIDLDRAKKGKPPLKGSDG-----------------KQKRNLTPEALEKKIS------- 849
DL R K GK P + K++ E +K+IS
Sbjct: 779 ---DLCRIKIGKTPKSQQEDIESREAERLPKLIQLAITNKKDKDKEKTDKEISFDVKAAF 838
Query: 850 -----------QTNAKIEKIERDMKT-------KEDLKTVALGTSKINYLDPRITVAWCK 888
+ KI K E +K K++LKTVALGTSKINYLDPRITVAWCK
Sbjct: 839 EKSRTLPDAKGKIKEKIAKYEEQIKKQEILKTGKDELKTVALGTSKINYLDPRITVAWCK 893
BLAST of Cp4.1LG14g07500 vs. ExPASy Swiss-Prot
Match:
P07799 (DNA topoisomerase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=top1 PE=1 SV=2)
HSP 1 Score: 516.5 bits (1329), Expect = 5.8e-145
Identity = 344/860 (40.00%), Postives = 483/860 (56.16%), Query Frame = 0
Query: 112 SMDSRPKQLANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKI 171
S DS L+ + S + SD E D + NHP + NK
Sbjct: 3 SSDSDSVSLSIRRRQRRGSSKRISMKESDEESD--------SSENHPLSESL-----NK- 62
Query: 172 KKSSEDSDDEVPL-----SSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQ 231
K SE +D++P+ SSK M ++S KK +KV NG K
Sbjct: 63 KSKSESDEDDIPIRKRRASSKKNMSNSS-----------SKK--RAKVMGNGGLKNGK-- 122
Query: 232 KPAVVSSKRPLPNADSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQ 291
K AVV + D + ++ S K ++S ++ S N K+E +D DD +P+
Sbjct: 123 KTAVVKEEE-----DFNEIAKPSPKHKRVSKANG--SKNGAKSAVKKEESDTDDSVPLRA 182
Query: 292 RMKMSAAVNKSSGSKKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWT 351
+S KS + AS++ ++ + + K+ S + D +KWT
Sbjct: 183 VSTVSLTPYKSE-----LPSGASTTQNRSPNDEEDEDEDYKWWTSENI-----DDTQKWT 242
Query: 352 TLVHNGVIFPPPYQ--THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENF 411
TL HNGVIF PPY+ VK+++ G PV+L PE EEVA +A M +TD+ + P F++NF
Sbjct: 243 TLEHNGVIFAPPYEPLPKNVKLIYDGNPVNLPPEAEEVAGFYAAMLETDHAKNPVFQDNF 302
Query: 412 WNDWRKLLGK---NHVIQNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEK 471
+ D+ K+ + NH I+ CDFT ++ ++ ++E+KK M E+KKA+K++K ++EEK
Sbjct: 303 FRDFLKVCDECNFNHNIKEFSKCDFTQMFHHFEQKREEKKSMPKEQKKAIKQKKDEEEEK 362
Query: 472 YMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPI 531
Y W ILDG KEKVGNFR+EPPGLFRGRG HPK G LK+R+ P ITINIG+ P+PE P+
Sbjct: 363 YKWCILDGRKEKVGNFRIEPPGLFRGRGSHPKTGSLKRRVYPEQITINIGEGVPVPE-PL 422
Query: 532 PGQRWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIK 591
PG +W EV+HDNTVTWLA W++ IN KYVFLAA SSLKGQSD +KYEK+R LKDYI
Sbjct: 423 PGHQWAEVKHDNTVTWLATWHENIN-NNVKYVFLAAGSSLKGQSDLKKYEKSRKLKDYID 482
Query: 592 NIRNSYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVP 651
+IR Y KD S+ RQ A YLID ALRAGNEK +DEADTVGCC+L+ E+V P
Sbjct: 483 DIRKGYRKDLKSELTVERQRGTAMYLIDVFALRAGNEKGEDEADTVGCCSLRYEHVTLKP 542
Query: 652 PNLLEFNFLGKDSIKYENTVEVELPVFKAITQF-QSGKSGSDDLFDKLDTSKLNAHLKDL 711
P + F+FLGKDSI+Y N VEV+ VFK + F + K D +FD+L T+ LN +L L
Sbjct: 543 PRTVVFDFLGKDSIRYYNEVEVDPQVFKNLKIFKRPPKKEGDLIFDRLSTNSLNKYLTSL 602
Query: 712 MPGLTAKVFRTYNASITLDDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHG 771
M GL+AKVFRTYNAS T+ + L + K+ +++KI+ Y AN+ VAI+CNHQR+V+K+H
Sbjct: 603 MDGLSAKVFRTYNASYTMAEELKKMPKNLTLADKILFYNRANRTVAILCNHQRSVTKNHD 662
Query: 772 AQMTRLNEKISEL---RDIVKELKIDLD-RAKKGKPP----------------------- 831
QM R E+I L R ++++ ++L+ + K KP
Sbjct: 663 VQMERFAERIKALQYQRMRLRKMMLNLEPKLAKSKPELLAKEEGITDSWIVKHHETLYEL 722
Query: 832 ---------------------------------LKGSDGKQK--------RNLTP----- 888
LK +D +K + + P
Sbjct: 723 EKEKIKKKFDRENEKLAAEDPKSVLPESELEVRLKAADELKKALDAELKSKKVDPGRSSM 782
BLAST of Cp4.1LG14g07500 vs. NCBI nr
Match:
XP_023553297.1 (DNA topoisomerase 1 beta-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1722 bits (4460), Expect = 0.0
Identity = 887/887 (100.00%), Postives = 887/887 (100.00%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL
Sbjct: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
Query: 121 ANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
ANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD
Sbjct: 121 ANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
Query: 181 EVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
EVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA
Sbjct: 181 EVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
Query: 241 DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAAVNKSSGS 300
DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAAVNKSSGS
Sbjct: 241 DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAAVNKSSGS 300
Query: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ
Sbjct: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
Query: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN
Sbjct: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
Query: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE
Sbjct: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
Query: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF
Sbjct: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
Query: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ
Sbjct: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
Query: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT
Sbjct: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
Query: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD
Sbjct: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
Query: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKEL 780
MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKEL
Sbjct: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKEL 780
Query: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG
Sbjct: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
Query: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
BLAST of Cp4.1LG14g07500 vs. NCBI nr
Match:
KAG7015549.1 (DNA topoisomerase 1 beta [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1711 bits (4430), Expect = 0.0
Identity = 879/887 (99.10%), Postives = 885/887 (99.77%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
ANGQSSNAQKRMTSLPKTSPMRPEIGSQKA+KSSIQEPLVKSLGTTLKVSDSMDSRPKQL
Sbjct: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKAAKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
Query: 121 ANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
ANAA+KEENDSIHPTQ+NSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD
Sbjct: 121 ANAALKEENDSIHPTQENSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
Query: 181 EVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
EVPLSSKFQMKSASGVLGG+QHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA
Sbjct: 181 EVPLSSKFQMKSASGVLGGKQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
Query: 241 DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAAVNKSSGS 300
DSHSSSQIS KKPKLSDSSTPLSTNTVSLKAKQEV DDDDHIPISQRMKMSAAVNKSSGS
Sbjct: 241 DSHSSSQISLKKPKLSDSSTPLSTNTVSLKAKQEVVDDDDHIPISQRMKMSAAVNKSSGS 300
Query: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ
Sbjct: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
Query: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN
Sbjct: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
Query: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE
Sbjct: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
Query: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF
Sbjct: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
Query: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ
Sbjct: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
Query: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT
Sbjct: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
Query: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD
Sbjct: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
Query: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKEL 780
MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDI+KEL
Sbjct: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKEL 780
Query: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG
Sbjct: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
Query: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP+FRF
Sbjct: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPEFRF 887
BLAST of Cp4.1LG14g07500 vs. NCBI nr
Match:
XP_022932254.1 (DNA topoisomerase 1 beta-like [Cucurbita moschata] >XP_022932255.1 DNA topoisomerase 1 beta-like [Cucurbita moschata] >XP_022932256.1 DNA topoisomerase 1 beta-like [Cucurbita moschata] >XP_022932257.1 DNA topoisomerase 1 beta-like [Cucurbita moschata])
HSP 1 Score: 1710 bits (4428), Expect = 0.0
Identity = 880/887 (99.21%), Postives = 884/887 (99.66%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
ANGQSSNAQKRMTSLPKTSPMRPEIGSQKA+KSSIQEPLVKSLGTTLKVSDSMDSRPKQL
Sbjct: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKAAKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
Query: 121 ANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
ANAAVKEENDSIHPTQ+NSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD
Sbjct: 121 ANAAVKEENDSIHPTQENSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
Query: 181 EVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
EVPLSSKFQMKSASGVLGG+QHGF EKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA
Sbjct: 181 EVPLSSKFQMKSASGVLGGKQHGFHEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
Query: 241 DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAAVNKSSGS 300
DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEV DDDDHIPISQRMKMSAAVNKSSGS
Sbjct: 241 DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVVDDDDHIPISQRMKMSAAVNKSSGS 300
Query: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ
Sbjct: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
Query: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
THGVKILHKGKPVDLT EQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN
Sbjct: 361 THGVKILHKGKPVDLTTEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
Query: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE
Sbjct: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
Query: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF
Sbjct: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
Query: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ
Sbjct: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
Query: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT
Sbjct: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
Query: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD
Sbjct: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
Query: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKEL 780
MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDI+KEL
Sbjct: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKEL 780
Query: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG
Sbjct: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
Query: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
BLAST of Cp4.1LG14g07500 vs. NCBI nr
Match:
XP_023007686.1 (DNA topoisomerase 1 beta-like [Cucurbita maxima] >XP_023007687.1 DNA topoisomerase 1 beta-like [Cucurbita maxima] >XP_023007688.1 DNA topoisomerase 1 beta-like [Cucurbita maxima] >XP_023007689.1 DNA topoisomerase 1 beta-like [Cucurbita maxima])
HSP 1 Score: 1703 bits (4410), Expect = 0.0
Identity = 876/887 (98.76%), Postives = 881/887 (99.32%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
MAVETFGKA MFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS
Sbjct: 1 MAVETFGKATMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
NGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL
Sbjct: 61 TNGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
Query: 121 ANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
NAAVKEENDSIHP Q+NSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD
Sbjct: 121 VNAAVKEENDSIHPAQENSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
Query: 181 EVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
EVPLSSKF+MKSASGVLGG+QHGFDEKKPLDSKVHQNGSTS DKLQKPAVVSSKRPLPNA
Sbjct: 181 EVPLSSKFRMKSASGVLGGKQHGFDEKKPLDSKVHQNGSTSSDKLQKPAVVSSKRPLPNA 240
Query: 241 DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAAVNKSSGS 300
DSHSSSQISSKKPKLSDSSTPLST+TVSLKAKQEV DDDDHIPISQRMKMSAAVNKSSGS
Sbjct: 241 DSHSSSQISSKKPKLSDSSTPLSTHTVSLKAKQEVVDDDDHIPISQRMKMSAAVNKSSGS 300
Query: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ
Sbjct: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
Query: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN
Sbjct: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
Query: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE
Sbjct: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
Query: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF
Sbjct: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
Query: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ
Sbjct: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
Query: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT
Sbjct: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
Query: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD
Sbjct: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
Query: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKEL 780
MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDI+KEL
Sbjct: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKEL 780
Query: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG
Sbjct: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
Query: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
BLAST of Cp4.1LG14g07500 vs. NCBI nr
Match:
KAG6577484.1 (DNA topoisomerase 1 alpha, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1682 bits (4355), Expect = 0.0
Identity = 867/874 (99.20%), Postives = 871/874 (99.66%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
ANGQSSNAQKRMTSLPKTSPMRPEIGSQKA+KSSIQEPLVKSLGTTLKVSDSMDSRPKQL
Sbjct: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKAAKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
Query: 121 ANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
ANAAVKEENDSIHPTQ+NSDSEDDKPLSIRLKGNSNHP KGPIPTVQKNKIKKSSEDSDD
Sbjct: 121 ANAAVKEENDSIHPTQENSDSEDDKPLSIRLKGNSNHPIKGPIPTVQKNKIKKSSEDSDD 180
Query: 181 EVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
EVPLSSKFQMKSASGVLGG+QHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA
Sbjct: 181 EVPLSSKFQMKSASGVLGGKQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
Query: 241 DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAAVNKSSGS 300
DSHSSSQIS KKPKLSDSSTPLSTNTVSLKAKQEV DDDDHIPISQRMKMSAAVNKSSGS
Sbjct: 241 DSHSSSQISLKKPKLSDSSTPLSTNTVSLKAKQEVVDDDDHIPISQRMKMSAAVNKSSGS 300
Query: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ
Sbjct: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
Query: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN
Sbjct: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
Query: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE
Sbjct: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
Query: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF
Sbjct: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
Query: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ
Sbjct: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
Query: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT
Sbjct: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
Query: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD
Sbjct: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
Query: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKEL 780
MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDI+KEL
Sbjct: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKEL 780
Query: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG
Sbjct: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
Query: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAK 874
TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAK
Sbjct: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAK 874
BLAST of Cp4.1LG14g07500 vs. ExPASy TrEMBL
Match:
A0A6J1EWI0 (DNA topoisomerase I OS=Cucurbita moschata OX=3662 GN=LOC111438616 PE=3 SV=1)
HSP 1 Score: 1710 bits (4428), Expect = 0.0
Identity = 880/887 (99.21%), Postives = 884/887 (99.66%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
ANGQSSNAQKRMTSLPKTSPMRPEIGSQKA+KSSIQEPLVKSLGTTLKVSDSMDSRPKQL
Sbjct: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKAAKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
Query: 121 ANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
ANAAVKEENDSIHPTQ+NSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD
Sbjct: 121 ANAAVKEENDSIHPTQENSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
Query: 181 EVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
EVPLSSKFQMKSASGVLGG+QHGF EKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA
Sbjct: 181 EVPLSSKFQMKSASGVLGGKQHGFHEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
Query: 241 DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAAVNKSSGS 300
DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEV DDDDHIPISQRMKMSAAVNKSSGS
Sbjct: 241 DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVVDDDDHIPISQRMKMSAAVNKSSGS 300
Query: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ
Sbjct: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
Query: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
THGVKILHKGKPVDLT EQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN
Sbjct: 361 THGVKILHKGKPVDLTTEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
Query: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE
Sbjct: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
Query: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF
Sbjct: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
Query: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ
Sbjct: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
Query: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT
Sbjct: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
Query: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD
Sbjct: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
Query: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKEL 780
MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDI+KEL
Sbjct: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKEL 780
Query: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG
Sbjct: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
Query: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
BLAST of Cp4.1LG14g07500 vs. ExPASy TrEMBL
Match:
A0A6J1KZE0 (DNA topoisomerase I OS=Cucurbita maxima OX=3661 GN=LOC111500229 PE=3 SV=1)
HSP 1 Score: 1703 bits (4410), Expect = 0.0
Identity = 876/887 (98.76%), Postives = 881/887 (99.32%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
MAVETFGKA MFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS
Sbjct: 1 MAVETFGKATMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
NGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL
Sbjct: 61 TNGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQL 120
Query: 121 ANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
NAAVKEENDSIHP Q+NSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD
Sbjct: 121 VNAAVKEENDSIHPAQENSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSDD 180
Query: 181 EVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPNA 240
EVPLSSKF+MKSASGVLGG+QHGFDEKKPLDSKVHQNGSTS DKLQKPAVVSSKRPLPNA
Sbjct: 181 EVPLSSKFRMKSASGVLGGKQHGFDEKKPLDSKVHQNGSTSSDKLQKPAVVSSKRPLPNA 240
Query: 241 DSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAAVNKSSGS 300
DSHSSSQISSKKPKLSDSSTPLST+TVSLKAKQEV DDDDHIPISQRMKMSAAVNKSSGS
Sbjct: 241 DSHSSSQISSKKPKLSDSSTPLSTHTVSLKAKQEVVDDDDHIPISQRMKMSAAVNKSSGS 300
Query: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ
Sbjct: 301 KKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQ 360
Query: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN
Sbjct: 361 THGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQN 420
Query: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE
Sbjct: 421 LDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVE 480
Query: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF
Sbjct: 481 PPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAF 540
Query: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ
Sbjct: 541 WNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQ 600
Query: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT
Sbjct: 601 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENT 660
Query: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD
Sbjct: 661 VEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDD 720
Query: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKEL 780
MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDI+KEL
Sbjct: 721 MLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKEL 780
Query: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG
Sbjct: 781 KIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALG 840
Query: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 TSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
BLAST of Cp4.1LG14g07500 vs. ExPASy TrEMBL
Match:
A0A1S3BM72 (DNA topoisomerase I OS=Cucumis melo OX=3656 GN=LOC103491068 PE=3 SV=1)
HSP 1 Score: 1576 bits (4080), Expect = 0.0
Identity = 814/889 (91.56%), Postives = 846/889 (95.16%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQL+SE+KHSQ+QRLN+L GR GSD CS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
Query: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSS-IQEPLVKSLGTTLKVSDSMDSRPKQ 120
NGQSSN QKRMTSLPKTSPMR EIGSQKA KSS IQEPL KSLG +LK SDSMDSRPK
Sbjct: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKAPKSSPIQEPLTKSLGISLKASDSMDSRPKN 120
Query: 121 LANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSD 180
L NAAVKEEN SI+P+Q+NSDSEDDKPLSIRLKGNSN P+KG + T+ KNK+KKSS DSD
Sbjct: 121 LVNAAVKEENVSINPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTIPKNKVKKSSGDSD 180
Query: 181 DEVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPN 240
DEVPLSSKFQMK ASG +G +Q GFDEKKPL KVHQNGSTSRDKLQKPAV+SSKRPLPN
Sbjct: 181 DEVPLSSKFQMKHASGPMGSKQLGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
Query: 241 ADSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMS-AAVNKSS 300
DSHS SQ S+KKPKLSDSS+PLS+ VSLKAKQEV DDDD IPISQR+K + A VNKSS
Sbjct: 241 EDSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDDIPISQRLKKTPATVNKSS 300
Query: 301 GSKKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPP 360
SK TVSKV SSSIKKT KKSKKPVKKSKYVKSTKLLPS+GDGQKKWTTLVHNGVIFPPP
Sbjct: 301 SSKPTVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVK+L+KGKPVDLTP+QEEVATMFAVMKDTDYM KPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQ EKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLK+RIRPSDITINIGK APIPECPIPG+RWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
Query: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTR 600
AFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEKAR+LKDYIKNIRN+YTKDFTSKDPTR
Sbjct: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIKNIRNAYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSI+YE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSG+DDLFDKLDT+KLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVK 780
DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDI+K
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889
BLAST of Cp4.1LG14g07500 vs. ExPASy TrEMBL
Match:
A0A0A0L2W2 (DNA topoisomerase I OS=Cucumis sativus OX=3659 GN=Csa_3G063680 PE=3 SV=1)
HSP 1 Score: 1567 bits (4057), Expect = 0.0
Identity = 809/889 (91.00%), Postives = 843/889 (94.83%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
MAVETFGKAPMFDDDDEDNMPIVFKR+SASRQNQL+SE+KHSQ+QRL++L GR GSD CS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRTSASRQNQLDSEIKHSQAQRLSKLPGRQGSDLCS 60
Query: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSS-IQEPLVKSLGTTLKVSDSMDSRPKQ 120
NGQSSN QKRMTSLPKTSPMR EIGSQKAS+SS I EPL KSLGT+LK S SMDSRPK
Sbjct: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASRSSPIPEPLTKSLGTSLKASHSMDSRPKS 120
Query: 121 LANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSD 180
L NA VKEEN SI+P+Q+NSDSEDDKPLSIRLKGN N P+KG + TV KNK+KKS DSD
Sbjct: 121 LVNAVVKEENVSINPSQENSDSEDDKPLSIRLKGNPNQPNKGLVSTVPKNKVKKSLADSD 180
Query: 181 DEVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPN 240
DEVPLSSKFQMK ASGVLG +QHGFDEKKPL KVHQNGSTSRDKLQKPAV+SSKRPLPN
Sbjct: 181 DEVPLSSKFQMKHASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
Query: 241 ADSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMK-MSAAVNKSS 300
DSHS SQ +KKPKL+DSS+PL++ VSLKAKQEV DDDD IPISQRMK +SA VNKSS
Sbjct: 241 EDSHSPSQFPTKKPKLTDSSSPLNSKLVSLKAKQEVDDDDDDIPISQRMKKVSATVNKSS 300
Query: 301 GSKKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPP 360
SK T+SKV SSSIKKT KKSKKPVKKSKYVKSTKLLPS+GDGQKKWTTLVHNGVIFPPP
Sbjct: 301 SSKPTISKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVK+L+KGKPVDLTP QEEVATMFAVMKDTDYM KPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQ EKEKKKQMTTEEKKA+KEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKAVKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLK+RI PSDITINIGK APIPECPIPG+RWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
Query: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTR 600
AFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRN+YTKDFTSKDPTR
Sbjct: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNAYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSI+YE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSG+DDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVK 780
DDMLNRGTK+GEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDI+K
Sbjct: 721 DDMLNRGTKNGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889
BLAST of Cp4.1LG14g07500 vs. ExPASy TrEMBL
Match:
A0A5A7VHI9 (DNA topoisomerase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002170 PE=3 SV=1)
HSP 1 Score: 1565 bits (4051), Expect = 0.0
Identity = 814/907 (89.75%), Postives = 846/907 (93.27%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQL+SE+KHSQ+QRLN+L GR GSD CS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
Query: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSS-IQEPLVKSLGTTLKVSDSMDSRPKQ 120
NGQSSN QKRMTSLPKTSPMR EIGSQKA KSS IQEPL KSLG +LK SDSMDSRPK
Sbjct: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKAPKSSPIQEPLTKSLGISLKASDSMDSRPKN 120
Query: 121 LANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSD 180
L NAAVKEEN SI+P+Q+NSDSEDDKPLSIRLKGNSN P+KG + T+ KNK+KKSS DSD
Sbjct: 121 LVNAAVKEENVSINPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTIPKNKVKKSSGDSD 180
Query: 181 DEVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPN 240
DEVPLSSKFQMK ASG +G +Q GFDEKKPL KVHQNGSTSRDKLQKPAV+SSKRPLPN
Sbjct: 181 DEVPLSSKFQMKHASGPMGSKQLGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
Query: 241 ADSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMS-AAVNKSS 300
DSHS SQ S+KKPKLSDSS+PLS+ VSLKAKQEV DDDD IPISQR+K + A VNKSS
Sbjct: 241 EDSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDDIPISQRLKKTPATVNKSS 300
Query: 301 GSKKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPP 360
SK TVSKV SSSIKKT KKSKKPVKKSKYVKSTKLLPS+GDGQKKWTTLVHNGVIFPPP
Sbjct: 301 SSKPTVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVK+L+KGKPVDLTP+QEEVATMFAVMKDTDYM KPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQ EKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLK+RIRPSDITINIGK APIPECPIPG+RWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
Query: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTR 600
AFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEKAR+LKDYIKNIRN+YTKDFTSKDPTR
Sbjct: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIKNIRNAYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSI+YE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSG+DDLFDKLDT+KLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVK 780
DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDI+K
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEK------------------IFNKSLLAKFAWAMD 887
LGTSKINYLDPRITVAWCKRHEVPIEK IFNKSLLAKFAWAMD
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKFKNFLLIFVIHNHNLLPQIFNKSLLAKFAWAMD 900
BLAST of Cp4.1LG14g07500 vs. TAIR 10
Match:
AT5G55310.1 (DNA topoisomerase 1 beta )
HSP 1 Score: 1026.9 bits (2654), Expect = 9.4e-300
Identity = 569/944 (60.28%), Postives = 689/944 (72.99%), Query Frame = 0
Query: 1 MAVETFGKAPM------FDDDDEDNMPIVFKRSS-----ASRQNQLNSEVKHSQSQRLNQ 60
MA E F K + ++D+DED++P+VFKR+S +R + +N+ +++S
Sbjct: 1 MATEAFVKPVVPNGHDGYEDEDEDDIPLVFKRNSNTAATTNRPSPINNAMRNSAI----- 60
Query: 61 LSGRPGSDACSANGQS--SNAQKRMTSLPKTSPMRPEI-GSQKASKSSIQEPLVKSLGTT 120
GS S +S ++ + +S ++S M+P + S +S+++ PL
Sbjct: 61 -----GSTKSSPPMRSPLTSPNRSASSSTRSSMMKPALPSSSSVQRSTLKSPLRDDRSVV 120
Query: 121 LKVSDSMDSRPKQLANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPT- 180
K + P D+ DSEDDKPLS RLK +S +K P +
Sbjct: 121 AKERNGFGKAPSV--------------SKSDDEDSEDDKPLSARLKLDSKEVTKQPSSSG 180
Query: 181 -------VQKNKIKKSSEDS-------DDEVPLSSKFQMKSASGVLGGRQHGFDEKKPLD 240
VQK+ ++ D+ P+SS Q K++ G + ++K+PL
Sbjct: 181 RGSTQQAVQKSNMRPQGLSDYTKKKVLDERAPMSSTVQTKTSVGTSSSKPVHIEQKRPLV 240
Query: 241 SKVHQNG---STSRDKLQKPAVVSSKRPLPNADSHSSSQISSKKPKLS------------ 300
+ + +NG T Q PA KRPL SS+Q S K+PKLS
Sbjct: 241 NNIDRNGLKPKTEGHSSQAPA----KRPLEKGS--SSNQSSVKRPKLSEPARPVKVEQGS 300
Query: 301 -------------DSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKMSAAVNKSSGSKKT 360
D+S PL N ++ K++ +D DDH+PI+ RMK ++ NKSS +K +
Sbjct: 301 HISATQDAKGKNLDASKPLRANQATV--KEDNSDGDDHVPIASRMKSDSSNNKSSSAKPS 360
Query: 361 VSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQTHG 420
SK+ +SS + +K K VK SKY KS+K LP SGDGQKKW TL HNGVIFPPPY+ HG
Sbjct: 361 SSKMIASSSRTIAQKPNKWVKDSKYSKSSKSLP-SGDGQKKWKTLQHNGVIFPPPYKRHG 420
Query: 421 VKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQNLDD 480
VKIL +GKPVDLTPEQEEVATMFAVM++T+Y +KPKF+ENFWNDWRKLLGKNH+I++LDD
Sbjct: 421 VKILFQGKPVDLTPEQEEVATMFAVMRETEYYKKPKFRENFWNDWRKLLGKNHMIKSLDD 480
Query: 481 CDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPG 540
CDFTPIY+WY EKE KKQMT EEK+ +KEEKLKQEEKYMWA+LDGV+E++GNFRVEPPG
Sbjct: 481 CDFTPIYEWYMQEKETKKQMTAEEKRIVKEEKLKQEEKYMWAVLDGVRERIGNFRVEPPG 540
Query: 541 LFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAFWND 600
LFRGRGEHPKMGKLKKRIRP DITINIGK+APIPECPIPG+RWKEV+HDNTVTWLAFW+D
Sbjct: 541 LFRGRGEHPKMGKLKKRIRPCDITINIGKEAPIPECPIPGERWKEVKHDNTVTWLAFWSD 600
Query: 601 PINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQIAV 660
PINPKEFKYVFLAASSSLKGQSDKEKYEKAR L ++I +IR +YTKDF +KD T+RQIAV
Sbjct: 601 PINPKEFKYVFLAASSSLKGQSDKEKYEKARKLHNHIGSIRAAYTKDFNNKDVTKRQIAV 660
Query: 661 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEV 720
ATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN L+F+FLGKDSI+Y NTVEV
Sbjct: 661 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEV 720
Query: 721 ELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLN 780
E V+KAI QFQ+GKS +DDLFD+LDTSKLN HLK+LM GLTAKVFRTYNASITLD ML+
Sbjct: 721 EPLVYKAIGQFQAGKSKTDDLFDELDTSKLNTHLKELMAGLTAKVFRTYNASITLDLMLS 780
Query: 781 RGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKELKID 840
+ T+DG+V EK+V YQ ANKEVAIICNHQRTVSKSHGAQ+ +L KI ELR+ +KEL ID
Sbjct: 781 KETRDGDVPEKVVVYQQANKEVAIICNHQRTVSKSHGAQVEKLAVKIEELREQIKELNID 840
Query: 841 LDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSK 888
LDRAKKG+ PL GSDGK+KRNLTPEALEKKI QT KIEK+ERDM+TKED+KTVALGTSK
Sbjct: 841 LDRAKKGRTPLMGSDGKRKRNLTPEALEKKIMQTQGKIEKMERDMQTKEDMKTVALGTSK 900
BLAST of Cp4.1LG14g07500 vs. TAIR 10
Match:
AT5G55300.1 (DNA topoisomerase I alpha )
HSP 1 Score: 1010.4 bits (2611), Expect = 9.1e-295
Identity = 559/938 (59.59%), Postives = 674/938 (71.86%), Query Frame = 0
Query: 1 MAVETFGKAPMFDD---DDEDNMPIVFKRSS--ASRQNQLNSEVKHSQSQRLNQLSGRPG 60
M ET K P+ D+ D +D+ P+ FKR++ AS NQ S + S++ ++S
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPM-R 60
Query: 61 SDACSANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDS 120
S S NG T KTS ++ + S + S + PL + +T+K +
Sbjct: 61 SPVTSPNG--------TTPSNKTSIVKSSMPSSSSKASPAKSPLRNDMPSTVKDRSQL-- 120
Query: 121 RPKQLANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKS- 180
+ D ++ DSEDD+PLS L GN S + + Q K
Sbjct: 121 ------------QKDQSECKIEHEDSEDDRPLSSILSGNKGPTSSRQVSSPQPEKKNNGD 180
Query: 181 ----------SEDSDDEVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDK 240
++SDDE P+SS F+ K SG+ GG Q DEKKPL K+HQNGST +++
Sbjct: 181 RPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKNE 240
Query: 241 LQKPAVVSSKRPLPNADSHSSSQISSKKPKLSDSSTPLSTNTV--------------SLK 300
+ V+ KRPL S S + K S +S + ++V +K
Sbjct: 241 VPNGKVL-GKRPLEKNSSADQSSLKKAKISASPTSVKMKQDSVKKEIDDKGRVLVSPKMK 300
Query: 301 AKQEVA-------DDDDHIPISQRMKMSAAVNKSSGSKKTVSKVASSS------------ 360
AKQ DDDD +PIS+R K ++ + +S +K K+ S+S
Sbjct: 301 AKQLSTREDGTDDDDDDDVPISKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKARNVVS 360
Query: 361 --IKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQTHGVKILHK 420
+ K +KK K SKY S+K PSSGDGQKKWTTLVHNGVIFPPPY+ HG+KIL+K
Sbjct: 361 PRSRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGVIFPPPYKPHGIKILYK 420
Query: 421 GKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQNLDDCDFTPI 480
GKPVDLT EQEEVATMFAVM++TDY KP+F+ENFWNDWR+LLGK HVIQ LDDCDFTPI
Sbjct: 421 GKPVDLTIEQEEVATMFAVMRETDYYTKPQFRENFWNDWRRLLGKKHVIQKLDDCDFTPI 480
Query: 481 YDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGLFRGRG 540
Y+W+ EKEKKKQM+TEEKKALKEEK+KQEEKYMWA++DGVKEK+GNFRVEPPGLFRGRG
Sbjct: 481 YEWHLEEKEKKKQMSTEEKKALKEEKMKQEEKYMWAVVDGVKEKIGNFRVEPPGLFRGRG 540
Query: 541 EHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAFWNDPINPKE 600
EHPKMGKLKKRI P +IT+NIGK APIPECPI G+RWKEV+HDNTVTWLAFW DPINPKE
Sbjct: 541 EHPKMGKLKKRIHPCEITLNIGKGAPIPECPIAGERWKEVKHDNTVTWLAFWADPINPKE 600
Query: 601 FKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQIAVATYLID 660
FKYVFL A SSLKG SDKEKYEKAR L D+I NIR +YTK+FT+KD RQIAVATYLID
Sbjct: 601 FKYVFLGAGSSLKGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVATYLID 660
Query: 661 KLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVELPVFK 720
KLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE V+K
Sbjct: 661 KLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVEPLVYK 720
Query: 721 AITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKDG 780
AI QFQ+GKS +DDLFD+LDTSKLNAHLK+L+PGLTAKVFRTYNASITLD+ML++ TKDG
Sbjct: 721 AIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQETKDG 780
Query: 781 EVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKELKIDLDRAKK 840
+V++KIV YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL++++KELK +LDRAKK
Sbjct: 781 DVTQKIVVYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNLDRAKK 840
Query: 841 GKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDP 888
GKPPL+GSDGK+ R+L P A EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKINYLDP
Sbjct: 841 GKPPLEGSDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDP 900
BLAST of Cp4.1LG14g07500 vs. TAIR 10
Match:
AT5G55300.2 (DNA topoisomerase I alpha )
HSP 1 Score: 1005.4 bits (2598), Expect = 2.9e-293
Identity = 557/935 (59.57%), Postives = 671/935 (71.76%), Query Frame = 0
Query: 1 MAVETFGKAPMFDD---DDEDNMPIVFKRSS--ASRQNQLNSEVKHSQSQRLNQLSGRPG 60
M ET K P+ D+ D +D+ P+ FKR++ AS NQ S + S++ ++S
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPM-R 60
Query: 61 SDACSANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDS 120
S S NG T KTS ++ + S + S + PL + +T+K +
Sbjct: 61 SPVTSPNG--------TTPSNKTSIVKSSMPSSSSKASPAKSPLRNDMPSTVKDRSQL-- 120
Query: 121 RPKQLANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKS- 180
+ D ++ DSEDD+PLS L GN S + + Q K
Sbjct: 121 ------------QKDQSECKIEHEDSEDDRPLSSILSGNKGPTSSRQVSSPQPEKKNNGD 180
Query: 181 ----------SEDSDDEVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDK 240
++SDDE P+SS F+ K SG+ GG Q DEKKPL K+HQNGST +++
Sbjct: 181 RPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKNE 240
Query: 241 LQKPAVVSSKRPLPNADSHSSSQISSKKPKLSDSSTPLSTNTV--------------SLK 300
+ V+ KRPL S S + K S +S + ++V +K
Sbjct: 241 VPNGKVL-GKRPLEKNSSADQSSLKKAKISASPTSVKMKQDSVKKEIDDKGRVLVSPKMK 300
Query: 301 AKQEVA-------DDDDHIPISQRMKMSAAVNKSSGSKKTVSKVASSS------------ 360
AKQ DDDD +PIS+R K ++ + +S +K K+ S+S
Sbjct: 301 AKQLSTREDGTDDDDDDDVPISKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKARNVVS 360
Query: 361 --IKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPPYQTHGVKILHK 420
+ K +KK K SKY S+K PSSGDGQKKWTTLVHNGVIFPPPY+ HG+KIL+K
Sbjct: 361 PRSRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGVIFPPPYKPHGIKILYK 420
Query: 421 GKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQNLDDCDFTPI 480
GKPVDLT EQEEVATMFAVM++TDY KP+F+ENFWNDWR+LLGK HVIQ LDDCDFTPI
Sbjct: 421 GKPVDLTIEQEEVATMFAVMRETDYYTKPQFRENFWNDWRRLLGKKHVIQKLDDCDFTPI 480
Query: 481 YDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGLFRGRG 540
Y+W+ EKEKKKQM+TEEKKALKEEK+KQEEKYMWA++DGVKEK+GNFRVEPPGLFRGRG
Sbjct: 481 YEWHLEEKEKKKQMSTEEKKALKEEKMKQEEKYMWAVVDGVKEKIGNFRVEPPGLFRGRG 540
Query: 541 EHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWLAFWNDPINPKE 600
EHPKMGKLKKRI P +IT+NIGK APIPECPI G+RWKEV+HDNTVTWLAFW DPINPKE
Sbjct: 541 EHPKMGKLKKRIHPCEITLNIGKGAPIPECPIAGERWKEVKHDNTVTWLAFWADPINPKE 600
Query: 601 FKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQIAVATYLID 660
FKYVFL A SSLKG SDKEKYEKAR L D+I NIR +YTK+FT+KD RQIAVATYLID
Sbjct: 601 FKYVFLGAGSSLKGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVATYLID 660
Query: 661 KLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVELPVFK 720
KLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE V+K
Sbjct: 661 KLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVEPLVYK 720
Query: 721 AITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKDG 780
AI QFQ+GKS +DDLFD+LDTSKLNAHLK+L+PGLTAKVFRTYNASITLD+ML++ TKDG
Sbjct: 721 AIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQETKDG 780
Query: 781 EVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKELKIDLDRAKK 840
+V++KIV YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL++++KELK +LDRAKK
Sbjct: 781 DVTQKIVVYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNLDRAKK 840
Query: 841 GKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDP 885
GKPPL+GSDGK+ R+L P A EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKINYLDP
Sbjct: 841 GKPPLEGSDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDP 900
BLAST of Cp4.1LG14g07500 vs. TAIR 10
Match:
AT5G55300.3 (DNA topoisomerase I alpha )
HSP 1 Score: 425.2 bits (1092), Expect = 1.3e-118
Identity = 219/332 (65.96%), Postives = 265/332 (79.82%), Query Frame = 0
Query: 556 AASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTRRQIAVATYLIDKLALRA 615
A SSLK +M +D +K + + S +Q++ D
Sbjct: 234 ADQSSLKKAKISASPTSVKMKQDSVKKEIDDKGRVLVSPKMKAKQLSTREDGTDD----D 293
Query: 616 GNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVELPVFKAITQFQ 675
++ DDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE V+KAI QFQ
Sbjct: 294 DDDDDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVEPLVYKAIGQFQ 353
Query: 676 SGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKDGEVSEKI 735
+GKS +DDLFD+LDTSKLNAHLK+L+PGLTAKVFRTYNASITLD+ML++ TKDG+V++KI
Sbjct: 354 AGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQETKDGDVTQKI 413
Query: 736 VTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVKELKIDLDRAKKGKPPLK 795
V YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL++++KELK +LDRAKKGKPPL+
Sbjct: 414 VVYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNLDRAKKGKPPLE 473
Query: 796 GSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAW 855
GSDGK+ R+L P A EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKINYLDPRITVAW
Sbjct: 474 GSDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAW 533
Query: 856 CKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 888
CKRHEVPIEKIF KSLL KFAWAMDV+P++RF
Sbjct: 534 CKRHEVPIEKIFTKSLLEKFAWAMDVEPEYRF 561
HSP 2 Score: 86.3 bits (212), Expect = 1.4e-16
Identity = 97/316 (30.70%), Postives = 146/316 (46.20%), Query Frame = 0
Query: 1 MAVETFGKAPMFDD---DDEDNMPIVFKRSS--ASRQNQLNSEVKHSQSQRLNQLSGRPG 60
M ET K P+ D+ D +D+ P+ FKR++ AS NQ S + S++ ++S
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPM-R 60
Query: 61 SDACSANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDS 120
S S NG T KTS ++ + S + S + PL + +T+K +
Sbjct: 61 SPVTSPNG--------TTPSNKTSIVKSSMPSSSSKASPAKSPLRNDMPSTVKDRSQL-- 120
Query: 121 RPKQLANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKS- 180
+ D ++ DSEDD+PLS L GN S + + Q K
Sbjct: 121 ------------QKDQSECKIEHEDSEDDRPLSSILSGNKGPTSSRQVSSPQPEKKNNGD 180
Query: 181 ----------SEDSDDEVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDK 240
++SDDE P+SS F+ K SG+ GG Q DEKKPL K+HQNGST +++
Sbjct: 181 RPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKNE 240
Query: 241 LQKPAVVSSKRPLPNADSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPI 300
+ V+ KRPL + S+ Q S KK K+S S T + S+K + DD + +
Sbjct: 241 VPNGKVL-GKRPLEK--NSSADQSSLKKAKISASPTSVKMKQDSVKKE---IDDKGRVLV 286
BLAST of Cp4.1LG14g07500 vs. TAIR 10
Match:
AT4G26701.1 (DNA binding;DNA topoisomerase type Is )
HSP 1 Score: 129.0 bits (323), Expect = 1.9e-29
Identity = 60/68 (88.24%), Postives = 64/68 (94.12%), Query Frame = 0
Query: 820 KIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAM 879
KIEK+ERDM+TKEDLKTVALGTSKINY+DPRITVAWCKRHE PIEKIFNKSLL KFAWAM
Sbjct: 2 KIEKMERDMQTKEDLKTVALGTSKINYMDPRITVAWCKRHEAPIEKIFNKSLLEKFAWAM 61
Query: 880 DVDPDFRF 888
DV+P F F
Sbjct: 62 DVEPHFTF 69
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FJ79 | 1.3e-298 | 60.28 | DNA topoisomerase 1 beta OS=Arabidopsis thaliana OX=3702 GN=TOP1B PE=1 SV=1 | [more] |
P30181 | 1.3e-293 | 59.59 | DNA topoisomerase 1 alpha OS=Arabidopsis thaliana OX=3702 GN=TOP1A PE=1 SV=1 | [more] |
P93119 | 4.8e-240 | 60.50 | DNA topoisomerase 1 OS=Daucus carota OX=4039 GN=TOP1 PE=2 SV=1 | [more] |
Q54RC3 | 7.3e-148 | 39.43 | DNA topoisomerase 1 OS=Dictyostelium discoideum OX=44689 GN=top1 PE=3 SV=1 | [more] |
P07799 | 5.8e-145 | 40.00 | DNA topoisomerase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=28... | [more] |
Match Name | E-value | Identity | Description | |
XP_023553297.1 | 0.0 | 100.00 | DNA topoisomerase 1 beta-like [Cucurbita pepo subsp. pepo] | [more] |
KAG7015549.1 | 0.0 | 99.10 | DNA topoisomerase 1 beta [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022932254.1 | 0.0 | 99.21 | DNA topoisomerase 1 beta-like [Cucurbita moschata] >XP_022932255.1 DNA topoisome... | [more] |
XP_023007686.1 | 0.0 | 98.76 | DNA topoisomerase 1 beta-like [Cucurbita maxima] >XP_023007687.1 DNA topoisomera... | [more] |
KAG6577484.1 | 0.0 | 99.20 | DNA topoisomerase 1 alpha, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EWI0 | 0.0 | 99.21 | DNA topoisomerase I OS=Cucurbita moschata OX=3662 GN=LOC111438616 PE=3 SV=1 | [more] |
A0A6J1KZE0 | 0.0 | 98.76 | DNA topoisomerase I OS=Cucurbita maxima OX=3661 GN=LOC111500229 PE=3 SV=1 | [more] |
A0A1S3BM72 | 0.0 | 91.56 | DNA topoisomerase I OS=Cucumis melo OX=3656 GN=LOC103491068 PE=3 SV=1 | [more] |
A0A0A0L2W2 | 0.0 | 91.00 | DNA topoisomerase I OS=Cucumis sativus OX=3659 GN=Csa_3G063680 PE=3 SV=1 | [more] |
A0A5A7VHI9 | 0.0 | 89.75 | DNA topoisomerase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G... | [more] |