Cp4.1LG14g06900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g06900
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	dof zinc finger protein DOF5.7-like
Location	Cp4.1LG14: 155290 .. 156071 (-)
RNA-Seq Expression	Cp4.1LG14g06900
Synteny	Cp4.1LG14g06900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTGCTCGATGGCCACAGGTATGGCTGATTGATTGACCCTTCTCTTTTCTAATGGAAATCTGTGTGTGTGTTGAGATGAATATTGGGGCATGCAGGTTGAGGTTAAAAGCATGGAATTAGAGGAAGAGGGTAGAAAGGCAGGTTTGGAGAGAAAAGCAAAGCCTGGGAAAGATCAAATACTGAACTGCCCAAGATGCAATTCCAACAACACAAAGTTCTGTTACTACAACAATTACAGCCTCTCCCAGCCAAGATACTTCTGCAAGTCTTGTAGAAGATATTGGACAGCAGGTGGGTCCTTGAGGAACATTCCAGTGGGTGGCGCCTCCAGGAAGAACAAGAGACCTCCTTCACCCAATTTTCCATCACCTCCAAAGAACAACAATAAGGATTACATGAGTAATGGTGATGATGATGATCAGGGCAACTCCCAATCATCCAATATCAATACTCCTTGCCCTTCTGCTACTAATATTGCTACTTGTTGGCTGTCGTCTGATGATATGAATGATCAAATAATGGTGAGAAGCAGTGGAATAATGTCCCCAAGGGAGCTGATTCCTTTTATACCCATGCCTGCACCAGCTCCTCCCCAGCCCACTACTAGTACTAGTACTGCACCCGATGCTTGTAACCCTTCAACGACATTATTCTCCACTACTGTGGAGGATTTCAAGCAACTTCCACCCATCATTTCTACTGATCATCAAAATGGAGCCAAATTGGGAGAGGTTCCTGCTTTTTGGAATGGGATTTACGGAGGAGGTTCATGGTGA

mRNA sequence

ATGGATTCTGCTCGATGGCCACAGGTTGAGGTTAAAAGCATGGAATTAGAGGAAGAGGGTAGAAAGGCAGGTTTGGAGAGAAAAGCAAAGCCTGGGAAAGATCAAATACTGAACTGCCCAAGATGCAATTCCAACAACACAAAGTTCTGTTACTACAACAATTACAGCCTCTCCCAGCCAAGATACTTCTGCAAGTCTTGTAGAAGATATTGGACAGCAGGTGGGTCCTTGAGGAACATTCCAGTGGGTGGCGCCTCCAGGAAGAACAAGAGACCTCCTTCACCCAATTTTCCATCACCTCCAAAGAACAACAATAAGGATTACATGAGTAATGGTGATGATGATGATCAGGGCAACTCCCAATCATCCAATATCAATACTCCTTGCCCTTCTGCTACTAATATTGCTACTTGTTGGCTGTCGTCTGATGATATGAATGATCAAATAATGGTGAGAAGCAGTGGAATAATGTCCCCAAGGGAGCTGATTCCTTTTATACCCATGCCTGCACCAGCTCCTCCCCAGCCCACTACTAGTACTAGTACTGCACCCGATGCTTGTAACCCTTCAACGACATTATTCTCCACTACTGTGGAGGATTTCAAGCAACTTCCACCCATCATTTCTACTGATCATCAAAATGGAGCCAAATTGGGAGAGGTTCCTGCTTTTTGGAATGGGATTTACGGAGGAGGTTCATGGTGA

Coding sequence (CDS)

ATGGATTCTGCTCGATGGCCACAGGTTGAGGTTAAAAGCATGGAATTAGAGGAAGAGGGTAGAAAGGCAGGTTTGGAGAGAAAAGCAAAGCCTGGGAAAGATCAAATACTGAACTGCCCAAGATGCAATTCCAACAACACAAAGTTCTGTTACTACAACAATTACAGCCTCTCCCAGCCAAGATACTTCTGCAAGTCTTGTAGAAGATATTGGACAGCAGGTGGGTCCTTGAGGAACATTCCAGTGGGTGGCGCCTCCAGGAAGAACAAGAGACCTCCTTCACCCAATTTTCCATCACCTCCAAAGAACAACAATAAGGATTACATGAGTAATGGTGATGATGATGATCAGGGCAACTCCCAATCATCCAATATCAATACTCCTTGCCCTTCTGCTACTAATATTGCTACTTGTTGGCTGTCGTCTGATGATATGAATGATCAAATAATGGTGAGAAGCAGTGGAATAATGTCCCCAAGGGAGCTGATTCCTTTTATACCCATGCCTGCACCAGCTCCTCCCCAGCCCACTACTAGTACTAGTACTGCACCCGATGCTTGTAACCCTTCAACGACATTATTCTCCACTACTGTGGAGGATTTCAAGCAACTTCCACCCATCATTTCTACTGATCATCAAAATGGAGCCAAATTGGGAGAGGTTCCTGCTTTTTGGAATGGGATTTACGGAGGAGGTTCATGGTGA

Protein sequence

MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNSQSSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTSTSTAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGGGSW

Homology

[Close]

BLAST of Cp4.1LG14g06900 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.6e-30
Identity = 71/117 (60.68%), Postives = 83/117 (70.94%), Query Frame = 0


Query: 1   MDSARWPQ-VEVKSME-------LEEEGRKAG----LERKAKPGKDQILNCPRCNSNNTK 60
           MD+A+WPQ   VK M        L+++         +ERKA+P KDQ LNCPRCNS NTK
Sbjct: 1   MDTAKWPQEFVVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTK 60

Query: 61  FCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNN 106
           FCYYNNYSL+QPRYFCK CRRYWTAGGSLRNIPVGG  RKNKR  S +  S P +++
Sbjct: 61  FCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSS 117

[Close]

BLAST of Cp4.1LG14g06900 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 6.2e-30
Identity = 72/123 (58.54%), Postives = 83/123 (67.48%), Query Frame = 0


Query: 1   MDSARWPQ-VEVKSME---------------LEEEGRKAGLERKAKPGKDQILNCPRCNS 60
           MD+A+WPQ + VK +E                 ++    G ERKA+P KDQ +NCPRCNS
Sbjct: 1   MDTAQWPQEIVVKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNS 60

Query: 61  NNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNN 108
            NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRNIPVGG SRKNKR  S +  S   NN
Sbjct: 61  TNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSS--SDISNN 120

[Close]

BLAST of Cp4.1LG14g06900 vs. ExPASy Swiss-Prot
Match: B9F1L8 (Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.1e-30
Identity = 60/80 (75.00%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 20  GRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRN 79
           G  AG ER+A+P K++ LNCPRCNS NTKFCYYNNYSL QPRYFCK+CRRYWT GGSLRN
Sbjct: 63  GAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRN 122

Query: 80  IPVGGASRKNKRPPSPNFPS 100
           +PVGG SRKNKR  S   PS
Sbjct: 123 VPVGGGSRKNKRSSSSVVPS 142

[Close]

BLAST of Cp4.1LG14g06900 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 56/76 (73.68%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 26  ERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGA 85
           ER+A+P K++ LNCPRCNS NTKFCYYNNYSL QPRYFCK+CRRYWT GGSLRN+PVGG 
Sbjct: 67  ERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGG 126

Query: 86  SRKNKRPPSPNFPSPP 102
           SRKNKR  S    + P
Sbjct: 127 SRKNKRSSSSAASASP 142

[Close]

BLAST of Cp4.1LG14g06900 vs. ExPASy Swiss-Prot
Match: Q43385 (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 5.4e-26
Identity = 57/77 (74.03%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 27  RKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGAS 86
           RKA+P   + +NCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+S
Sbjct: 66  RKARP--QEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 125

Query: 87  RKNKRPPSP-NFPSPPK 103
           RKNKR  +P   PS PK
Sbjct: 126 RKNKRSSTPLASPSNPK 140

[Close]

BLAST of Cp4.1LG14g06900 vs. NCBI nr
Match: XP_023553431.1 (dof zinc finger protein DOF5.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 477 bits (1227), Expect = 7.99e-170
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120

Query: 121 QSSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST 180
           QSSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST
Sbjct: 121 QSSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST 180

Query: 181 STAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGGGSW 234
           STAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGGGSW
Sbjct: 181 STAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGGGSW 234

[Close]

BLAST of Cp4.1LG14g06900 vs. NCBI nr
Match: XP_022923076.1 (dof zinc finger protein DOF5.7-like [Cucurbita moschata])

HSP 1 Score: 464 bits (1194), Expect = 8.60e-165
Identity = 227/234 (97.01%), Postives = 230/234 (98.29%), Query Frame = 0


Query: 1   MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVEVKSMELEEEGRKAGLERKAKPGKDQIL+CPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAGWPQVEVKSMELEEEGRKAGLERKAKPGKDQILSCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120

Query: 121 QSSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST 180
           Q+SNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST
Sbjct: 121 QTSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST 180

Query: 181 STAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGGGSW 234
            TAPDACNPSTTLF+ TVEDFKQLPPIISTDHQNG KLGEVPAFWNGIYGGGSW
Sbjct: 181 ITAPDACNPSTTLFTATVEDFKQLPPIISTDHQNGGKLGEVPAFWNGIYGGGSW 234

[Close]

BLAST of Cp4.1LG14g06900 vs. NCBI nr
Match: KAG6576640.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014692.1 Dof zinc finger protein DOF4.6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 463 bits (1191), Expect = 2.47e-164
Identity = 227/234 (97.01%), Postives = 228/234 (97.44%), Query Frame = 0


Query: 1   MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVE KSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAGWPQVEAKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120

Query: 121 QSSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST 180
           QSSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST
Sbjct: 121 QSSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST 180

Query: 181 STAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGGGSW 234
            TAPDACNPSTTLF+ TV DFKQLPPIISTDHQNG KLGEVPAFWNGIYGGGSW
Sbjct: 181 ITAPDACNPSTTLFTATVGDFKQLPPIISTDHQNGGKLGEVPAFWNGIYGGGSW 234

[Close]

BLAST of Cp4.1LG14g06900 vs. NCBI nr
Match: XP_022984510.1 (dof zinc finger protein DOF5.7-like [Cucurbita maxima])

HSP 1 Score: 463 bits (1191), Expect = 2.47e-164
Identity = 227/234 (97.01%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 1   MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSARWPQVEVKSMELEEEGR+AGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSARWPQVEVKSMELEEEGRRAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120

Query: 121 QSSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST 180
           QSSNINTPCPSATNIATCWLS D MNDQIMVRSSGIMSPRELIPFIPMP PAPPQPTTST
Sbjct: 121 QSSNINTPCPSATNIATCWLSCDGMNDQIMVRSSGIMSPRELIPFIPMPVPAPPQPTTST 180

Query: 181 STAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGGGSW 234
            TAPDACNPSTTLF+TTVEDFKQLP IISTDHQNGAKLGEVPAFWNGIYGGGSW
Sbjct: 181 ITAPDACNPSTTLFTTTVEDFKQLPTIISTDHQNGAKLGEVPAFWNGIYGGGSW 234

[Close]

BLAST of Cp4.1LG14g06900 vs. NCBI nr
Match: XP_038895823.1 (dof zinc finger protein DOF4.6-like [Benincasa hispida])

HSP 1 Score: 307 bits (787), Expect = 6.04e-103
Identity = 168/240 (70.00%), Postives = 184/240 (76.67%), Query Frame = 0


Query: 1   MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDS+ WPQVEVK+MELEEEG KA +ERK K  KDQILNCPRCNSNNTKFCYYNNYSL+QP
Sbjct: 1   MDSSHWPQVEVKNMELEEEGIKAVVERKEKARKDQILNCPRCNSNNTKFCYYNNYSLAQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP S NF SPP  NN+   +NGDDDD  + 
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP-SANFSSPPSKNNQKNYNNGDDDDHQDI 120

Query: 121 QSSNINTPCPSAT--NIAT--CWLSSDD--MNDQIMVRSSGIMSPRELIPFIPMPAPAPP 180
              NINT   S+T  N AT  CWLSSDD  +N+QIM+RSSGIMS RELIPFIPMP PAP 
Sbjct: 121 SQLNINTTSCSSTAANTATSCCWLSSDDTHVNNQIMLRSSGIMSQRELIPFIPMPTPAPQ 180

Query: 181 QPTTSTSTAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGGGSW 234
           QPT +               +T +EDFKQL  IISTD   G KLG+VPAFWNGI+GGGSW
Sbjct: 181 QPTAA---------------ATALEDFKQLSTIISTDQNGGTKLGDVPAFWNGIFGGGSW 224

[Close]

BLAST of Cp4.1LG14g06900 vs. ExPASy TrEMBL
Match: A0A6J1E5U7 (dof zinc finger protein DOF5.7-like OS=Cucurbita moschata OX=3662 GN=LOC111430855 PE=4 SV=1)

HSP 1 Score: 464 bits (1194), Expect = 4.16e-165
Identity = 227/234 (97.01%), Postives = 230/234 (98.29%), Query Frame = 0


Query: 1   MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVEVKSMELEEEGRKAGLERKAKPGKDQIL+CPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAGWPQVEVKSMELEEEGRKAGLERKAKPGKDQILSCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120

Query: 121 QSSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST 180
           Q+SNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST
Sbjct: 121 QTSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST 180

Query: 181 STAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGGGSW 234
            TAPDACNPSTTLF+ TVEDFKQLPPIISTDHQNG KLGEVPAFWNGIYGGGSW
Sbjct: 181 ITAPDACNPSTTLFTATVEDFKQLPPIISTDHQNGGKLGEVPAFWNGIYGGGSW 234

[Close]

BLAST of Cp4.1LG14g06900 vs. ExPASy TrEMBL
Match: A0A6J1J8T6 (dof zinc finger protein DOF5.7-like OS=Cucurbita maxima OX=3661 GN=LOC111482784 PE=4 SV=1)

HSP 1 Score: 463 bits (1191), Expect = 1.19e-164
Identity = 227/234 (97.01%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 1   MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSARWPQVEVKSMELEEEGR+AGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSARWPQVEVKSMELEEEGRRAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNNKDYMSNGDDDDQGNS 120

Query: 121 QSSNINTPCPSATNIATCWLSSDDMNDQIMVRSSGIMSPRELIPFIPMPAPAPPQPTTST 180
           QSSNINTPCPSATNIATCWLS D MNDQIMVRSSGIMSPRELIPFIPMP PAPPQPTTST
Sbjct: 121 QSSNINTPCPSATNIATCWLSCDGMNDQIMVRSSGIMSPRELIPFIPMPVPAPPQPTTST 180

Query: 181 STAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGGGSW 234
            TAPDACNPSTTLF+TTVEDFKQLP IISTDHQNGAKLGEVPAFWNGIYGGGSW
Sbjct: 181 ITAPDACNPSTTLFTTTVEDFKQLPTIISTDHQNGAKLGEVPAFWNGIYGGGSW 234

[Close]

BLAST of Cp4.1LG14g06900 vs. ExPASy TrEMBL
Match: A0A0A0L9J3 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238150 PE=4 SV=1)

HSP 1 Score: 306 bits (784), Expect = 8.66e-103
Identity = 178/244 (72.95%), Postives = 192/244 (78.69%), Query Frame = 0


Query: 1   MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVEVK+MELEEEG KA +ERKAK  KDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPP-KNNNKDYMSNG-DDDDQG 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP S NF  PP KNN K+Y ++G DDDDQG
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP-SANFSLPPSKNNQKNYNNDGGDDDDQG 120

Query: 121 NSQSSNIN-TPCPSA---TNIAT--CWLSSDD--MNDQIMVRSSGIMSPRELIPFIPMPA 180
            SQ  NIN T C S    TN AT  CWLSSD+  MN+QIM+RS+GIMS RELIPFIPMPA
Sbjct: 121 ISQL-NINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPA 180

Query: 181 PAPPQPTTSTSTAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYG 234
           PAPPQPT   +                +EDFKQL  IISTD QNGAKLG+ PAFW+GI+G
Sbjct: 181 PAPPQPTAVAA----------------LEDFKQLSTIISTD-QNGAKLGDAPAFWSGIFG 225

[Close]

BLAST of Cp4.1LG14g06900 vs. ExPASy TrEMBL
Match: A0A5D3CLI1 (Dof zinc finger protein DOF1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001330 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 1.50e-99
Identity = 177/245 (72.24%), Postives = 190/245 (77.55%), Query Frame = 0


Query: 1   MDSARWPQVEVKSMELEEE-GRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQ 60
           MDSA WPQVEVK+M+LEEE G KA +ERKAK  KDQILNCPRCNSNNTKFCYYNNYSLSQ
Sbjct: 1   MDSAHWPQVEVKNMDLEEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60

Query: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPP-KNNNKDYMSNGD-DDDQ 120
           PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP S NF  PP KNN K+Y + G  DDDQ
Sbjct: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP-SANFSLPPSKNNQKNYNNGGGGDDDQ 120

Query: 121 GNSQSSNIN-TPCPSA---TNIAT--CWLSSDD--MNDQIMVRSSGIMSPRELIPFIPMP 180
           G SQ  NIN T C S    TN A   CWLSSD+  MN+QIM+RS+GIMS RELIPFIPMP
Sbjct: 121 GISQL-NINITSCSSTATTTNTAATCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMP 180

Query: 181 APAPPQPTTSTSTAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIY 234
           APAPPQPT  +  A              +EDFKQL  IISTD QNGAKLG+ PAFWNGI+
Sbjct: 181 APAPPQPTAVSVAA--------------LEDFKQLSTIISTD-QNGAKLGDAPAFWNGIF 228

[Close]

BLAST of Cp4.1LG14g06900 vs. ExPASy TrEMBL
Match: A0A1S3C3F2 (dof zinc finger protein DOF1.8-like OS=Cucumis melo OX=3656 GN=LOC103496053 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 1.50e-99
Identity = 177/245 (72.24%), Postives = 190/245 (77.55%), Query Frame = 0


Query: 1   MDSARWPQVEVKSMELEEE-GRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQ 60
           MDSA WPQVEVK+M+LEEE G KA +ERKAK  KDQILNCPRCNSNNTKFCYYNNYSLSQ
Sbjct: 1   MDSAHWPQVEVKNMDLEEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60

Query: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPP-KNNNKDYMSNGD-DDDQ 120
           PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP S NF  PP KNN K+Y + G  DDDQ
Sbjct: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP-SANFSLPPSKNNQKNYNNGGGGDDDQ 120

Query: 121 GNSQSSNIN-TPCPSA---TNIAT--CWLSSDD--MNDQIMVRSSGIMSPRELIPFIPMP 180
           G SQ  NIN T C S    TN A   CWLSSD+  MN+QIM+RS+GIMS RELIPFIPMP
Sbjct: 121 GISQL-NINITSCSSTATTTNTAATCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMP 180

Query: 181 APAPPQPTTSTSTAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIY 234
           APAPPQPT  +  A              +EDFKQL  IISTD QNGAKLG+ PAFWNGI+
Sbjct: 181 APAPPQPTAVSVAA--------------LEDFKQLSTIISTD-QNGAKLGDAPAFWNGIF 228

[Close]

BLAST of Cp4.1LG14g06900 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.6e-31
Identity = 71/117 (60.68%), Postives = 83/117 (70.94%), Query Frame = 0


Query: 1   MDSARWPQ-VEVKSME-------LEEEGRKAG----LERKAKPGKDQILNCPRCNSNNTK 60
           MD+A+WPQ   VK M        L+++         +ERKA+P KDQ LNCPRCNS NTK
Sbjct: 1   MDTAKWPQEFVVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTK 60

Query: 61  FCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNNN 106
           FCYYNNYSL+QPRYFCK CRRYWTAGGSLRNIPVGG  RKNKR  S +  S P +++
Sbjct: 61  FCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSS 117

[Close]

BLAST of Cp4.1LG14g06900 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 132.5 bits (332), Expect = 4.4e-31
Identity = 72/123 (58.54%), Postives = 83/123 (67.48%), Query Frame = 0


Query: 1   MDSARWPQ-VEVKSME---------------LEEEGRKAGLERKAKPGKDQILNCPRCNS 60
           MD+A+WPQ + VK +E                 ++    G ERKA+P KDQ +NCPRCNS
Sbjct: 1   MDTAQWPQEIVVKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNS 60

Query: 61  NNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPPKNN 108
            NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRNIPVGG SRKNKR  S +  S   NN
Sbjct: 61  TNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSS--SDISNN 120

[Close]

BLAST of Cp4.1LG14g06900 vs. TAIR 10
Match: AT3G61850.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 119.4 bits (298), Expect = 3.9e-27
Identity = 57/77 (74.03%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 27  RKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGAS 86
           RKA+P   + +NCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+S
Sbjct: 66  RKARP--QEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 125

Query: 87  RKNKRPPSP-NFPSPPK 103
           RKNKR  +P   PS PK
Sbjct: 126 RKNKRSSTPLASPSNPK 140

[Close]

BLAST of Cp4.1LG14g06900 vs. TAIR 10
Match: AT3G61850.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 119.4 bits (298), Expect = 3.9e-27
Identity = 57/77 (74.03%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 27  RKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGAS 86
           RKA+P   + +NCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+S
Sbjct: 54  RKARP--QEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 113

Query: 87  RKNKRPPSP-NFPSPPK 103
           RKNKR  +P   PS PK
Sbjct: 114 RKNKRSSTPLASPSNPK 128

[Close]

BLAST of Cp4.1LG14g06900 vs. TAIR 10
Match: AT3G61850.3 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 119.4 bits (298), Expect = 3.9e-27
Identity = 57/77 (74.03%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 27  RKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGAS 86
           RKA+P   + +NCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+S
Sbjct: 54  RKARP--QEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 113

Query: 87  RKNKRPPSP-NFPSPPK 103
           RKNKR  +P   PS PK
Sbjct: 114 RKNKRSSTPLASPSNPK 128

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g06900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JQ8	3.6e-30	60.68	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
Q8LAP8	6.2e-30	58.54	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
B9F1L8	8.1e-30	75.00	Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 ...	[more]
Q9SXG8	1.3e-27	73.68	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
Q43385	5.4e-26	74.03	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV...	[more]

BLAST of Cp4.1LG14g06900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553431.1	7.99e-170	100.00	dof zinc finger protein DOF5.7-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923076.1	8.60e-165	97.01	dof zinc finger protein DOF5.7-like [Cucurbita moschata]	[more]
KAG6576640.1	2.47e-164	97.01	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG701...	[more]
XP_022984510.1	2.47e-164	97.01	dof zinc finger protein DOF5.7-like [Cucurbita maxima]	[more]
XP_038895823.1	6.04e-103	70.00	dof zinc finger protein DOF4.6-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG14g06900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5U7	4.16e-165	97.01	dof zinc finger protein DOF5.7-like OS=Cucurbita moschata OX=3662 GN=LOC11143085...	[more]
A0A6J1J8T6	1.19e-164	97.01	dof zinc finger protein DOF5.7-like OS=Cucurbita maxima OX=3661 GN=LOC111482784 ...	[more]
A0A0A0L9J3	8.66e-103	72.95	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238150 PE...	[more]
A0A5D3CLI1	1.50e-99	72.24	Dof zinc finger protein DOF1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C3F2	1.50e-99	72.24	dof zinc finger protein DOF1.8-like OS=Cucumis melo OX=3656 GN=LOC103496053 PE=4...	[more]

BLAST of Cp4.1LG14g06900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64620.1	2.6e-31	60.68	Dof-type zinc finger DNA-binding family protein	[more]
AT4G24060.1	4.4e-31	58.54	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.1	3.9e-27	74.03	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.2	3.9e-27	74.03	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.3	3.9e-27	74.03	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 34..91 e-value: 2.2E-33 score: 114.2
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 39..75
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 37..91 score: 29.012367
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..129
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 22..163
None	No IPR available	PANTHER	PTHR31992:SF124	DOF ZINC FINGER PROTEIN DOF1.8	coord: 22..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g06900.1	Cp4.1LG14g06900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding