Cp4.1LG14g06610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g06610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	plastid division protein PDV1
Location	Cp4.1LG14: 342149 .. 343554 (+)
RNA-Seq Expression	Cp4.1LG14g06610
Synteny	Cp4.1LG14g06610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGGGACATGGAGATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAGGCAATTCACTCAATTTCCCGACATCACTTCCTCACCTCCACCAAAAATCTCAGGAAATCGGACAACAAGGATTCCAAGACCCCCAATGGCGTACCCGACACTGCCGCCTTCCCTTTCATCAACGAATTTCGTAATCACCTTGATGATTCTGCCACTCAGGAGGCTAGAAGCCTAAATGCCATTCTAACTGCGCTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCTATTTCGCGCGCCTTCTTTCTTTCACCTAATTTTATCACTCTCACTGAGTAATTTGAAGGAAGCCACAACAGGAAAACATTGATTCGATCTTATTGTGGGGATTCCCTACCTCTTTAGCTATGTTTAGGATTCAATAATGCTTTCCAATTGGAATTAAATCGCTAATTTACGATTTTCTGTGTTTTCTGCTGTCTGGAAGACTGAAAGGACGACTATTAGGTTCTCTATTCCTTGGCTTCCTTGATTTTTGTTATACGTCATTATCCAATTAGCCAAAATATGGGATGGAGTATGAATTTCTTGTAGCGTCTGCTTCGTTTAATCTCTGGTTATTGGAAGCTCGTGTAAATTATGATTTCGGGAGTCTTGCAGGATTTTCCTTTTCATTTTTATGTTAAAATTTTACGCTCAGTACAATTAGGTCTAGCAATTAGCCATACAACTTTCCATTTTGATGTTTGAATAATGAAAAGATGTAATCACACAAAACGGCTCTGTAAATCTATTCGAAATGATGAACAGATTCATATCAAATTTTGACAACTGACTCAGCGAATTCTTTCATTATGTTTGTAGACCGTGCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGGTGATCATCATGGCAAGAACTATAAAGTCATCAATGAAGCTTTAGCGTTTGTTGGAGATGTGCGTTATGCAGCTAACTATAATTCACATGAAAATCAATATGGTCAGAAGCCTGTGCCAAACAGATCAAAGAGGTCTAATACTCTGATCAAAATGCTACTCTCATCTCTCAATTTTGCAAGGACATCCCTCAAAATGGATCATGTGGGCGGGGCACTTGGCAATGCTGCCATGGTTGCGATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTGGTAGCATACAAGAAGCCAGAGCTTGAGAGACATGATATTCCCTTCAACAGAAACCTTCCAAGAACTTCACGGCTCCAGGAGTCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAG

mRNA sequence

ATGAAATGGGACATGGAGATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAGGCAATTCACTCAATTTCCCGACATCACTTCCTCACCTCCACCAAAAATCTCAGGAAATCGGACAACAAGGATTCCAAGACCCCCAATGGCACCGTGCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGGTGATCATCATGGCAAGAACTATAAAGTCATCAATGAAGCTTTAGCGTTTGTTGGAGATGTGCGTTATGCAGCTAACTATAATTCACATGAAAATCAATATGGTCAGAAGCCTGTGCCAAACAGATCAAAGAGGTCTAATACTCTGATCAAAATGCTACTCTCATCTCTCAATTTTGCAAGGACATCCCTCAAAATGGATCATGTGGGCGGGGCACTTGGCAATGCTGCCATGGTTGCGATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTGGTAGCATACAAGAAGCCAGAGCTTGAGAGACATGATATTCCCTTCAACAGAAACCTTCCAAGAACTTCACGGCTCCAGGAGTCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAG

Coding sequence (CDS)

ATGAAATGGGACATGGAGATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAGGCAATTCACTCAATTTCCCGACATCACTTCCTCACCTCCACCAAAAATCTCAGGAAATCGGACAACAAGGATTCCAAGACCCCCAATGGCACCGTGCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGGTGATCATCATGGCAAGAACTATAAAGTCATCAATGAAGCTTTAGCGTTTGTTGGAGATGTGCGTTATGCAGCTAACTATAATTCACATGAAAATCAATATGGTCAGAAGCCTGTGCCAAACAGATCAAAGAGGTCTAATACTCTGATCAAAATGCTACTCTCATCTCTCAATTTTGCAAGGACATCCCTCAAAATGGATCATGTGGGCGGGGCACTTGGCAATGCTGCCATGGTTGCGATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTGGTAGCATACAAGAAGCCAGAGCTTGAGAGACATGATATTCCCTTCAACAGAAACCTTCCAAGAACTTCACGGCTCCAGGAGTCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAG

Protein sequence

MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNGTVQVQQQVERDAAIARLEQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNRSKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPELERHDIPFNRNLPRTSRLQESSPNEDFSNFDVLSARG

Homology

[Close]

BLAST of Cp4.1LG14g06610 vs. ExPASy Swiss-Prot
Match: Q9FK13 (Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38
Identity = 104/272 (38.24%), Postives = 143/272 (52.57%), Query Frame = 0


Query: 4   DMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG------- 63
           +MEIEEIE +LEKIWDLHDKLS+ IH IS+ HFL S K   +S+ +  K P+G       
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKR--KNPHGNSGEDKR 62

Query: 64  ------------------------------------------TVQVQQQVERDAAIARLE 123
                                                     T+  QQ+ E+D AIARLE
Sbjct: 63  PGYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLE 122

Query: 124 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNRSK------ 183
           QSRI+LAMRL +HHGKNY V+ EALAFVG ++  ++Y S ++ Y     P+ +       
Sbjct: 123 QSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPDGI 182

Query: 184 RSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPELERHD 221
            SN +I    S+  FA+ +L  +HV G LGNAA+ AIS++A LHLHQV   +    ++ D
Sbjct: 183 ESNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKED 242

[Close]

BLAST of Cp4.1LG14g06610 vs. NCBI nr
Match: XP_022922902.1 (plastid division protein PDV1 [Cucurbita moschata])

HSP 1 Score: 404 bits (1038), Expect = 9.23e-141
Identity = 217/266 (81.58%), Postives = 218/266 (81.95%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG---- 60
           MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG    
Sbjct: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNGVPDT 60

Query: 61  ------------------------------------------TVQVQQQVERDAAIARLE 120
                                                     TVQVQQQVERDAAIARLE
Sbjct: 61  AAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 120

Query: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNRSKRSNTLI 180
           QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPN SKRSNTLI
Sbjct: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNSSKRSNTLI 180

Query: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPELERHDIPFNRN 220
           KMLLSSLNFARTSLKMDHV GALGNAAMVAISMLAFLHLHQVVAYKKP+LERHDIPFNRN
Sbjct: 181 KMLLSSLNFARTSLKMDHVSGALGNAAMVAISMLAFLHLHQVVAYKKPQLERHDIPFNRN 240

[Close]

BLAST of Cp4.1LG14g06610 vs. NCBI nr
Match: KAG7014727.1 (Plastid division protein PDV1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 400 bits (1027), Expect = 4.22e-139
Identity = 217/266 (81.58%), Postives = 218/266 (81.95%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG---- 60
           MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSD KDSKTPNG    
Sbjct: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSD-KDSKTPNGVPDT 60

Query: 61  ------------------------------------------TVQVQQQVERDAAIARLE 120
                                                     TVQVQQQVERDAAIARLE
Sbjct: 61  AAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 120

Query: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNRSKRSNTLI 180
           QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPN SKRSNTLI
Sbjct: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNSSKRSNTLI 180

Query: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPELERHDIPFNRN 220
           KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKP+LERHDIPFNRN
Sbjct: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPQLERHDIPFNRN 240

[Close]

BLAST of Cp4.1LG14g06610 vs. NCBI nr
Match: KAG6576678.1 (Plastid division protein PDV1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 400 bits (1027), Expect = 4.16e-138
Identity = 217/266 (81.58%), Postives = 218/266 (81.95%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG---- 60
           MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSD KDSKTPNG    
Sbjct: 66  MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSD-KDSKTPNGVPDT 125

Query: 61  ------------------------------------------TVQVQQQVERDAAIARLE 120
                                                     TVQVQQQVERDAAIARLE
Sbjct: 126 AAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 185

Query: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNRSKRSNTLI 180
           QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPN SKRSNTLI
Sbjct: 186 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNSSKRSNTLI 245

Query: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPELERHDIPFNRN 220
           KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKP+LERHDIPFNRN
Sbjct: 246 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPQLERHDIPFNRN 305

[Close]

BLAST of Cp4.1LG14g06610 vs. NCBI nr
Match: XP_022985171.1 (plastid division protein PDV1-like [Cucurbita maxima])

HSP 1 Score: 394 bits (1011), Expect = 1.20e-136
Identity = 211/266 (79.32%), Postives = 216/266 (81.20%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG---- 60
           MKWDMEIEEIEVIL KIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKD KTPNG    
Sbjct: 1   MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPNGVPDT 60

Query: 61  ------------------------------------------TVQVQQQVERDAAIARLE 120
                                                     TVQVQQQVERDAAIARLE
Sbjct: 61  AAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 120

Query: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNRSKRSNTLI 180
           QSRIVLA+RLGDHHGKNYKVINEALAFVGDVRY ANYNSHENQYGQKPVPN SKRS+TLI
Sbjct: 121 QSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQYGQKPVPNSSKRSSTLI 180

Query: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPELERHDIPFNRN 220
           KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAY+KP+LERHDIPF+RN
Sbjct: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRKPQLERHDIPFDRN 240

[Close]

BLAST of Cp4.1LG14g06610 vs. NCBI nr
Match: XP_038878155.1 (plastid division protein PDV1 [Benincasa hispida])

HSP 1 Score: 338 bits (866), Expect = 1.81e-114
Identity = 193/274 (70.44%), Postives = 204/274 (74.45%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDS-KTPNG--- 60
           MKWDMEIEEIE +LEKIWDLHDKLSEAIHSISR HFLTSTK+LRKSDNKDS  TP+    
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNKDSINTPDALPN 60

Query: 61  -------------------------------------------TVQVQQQVERDAAIARL 120
                                                      TV+VQQQVERDAAIARL
Sbjct: 61  TAVFPFINEFRIDLDDSAIQEARSLNSIRTALENLEDQFEFFHTVKVQQQVERDAAIARL 120

Query: 121 EQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYG-------QKPVPNR 180
           EQSRIVLAMRL +HHGKNYKVI+EALAFVGDVRYAANY SHENQYG       QKPV N 
Sbjct: 121 EQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENQYGPEFSTSSQKPVSNS 180

Query: 181 SKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPELER 220
           SKRSNT I+ML S+LNFAR SLKMDHVGG LGNAAMVAISMLAFLHLHQV AYK+P LER
Sbjct: 181 SKRSNTRIQMLFSTLNFARKSLKMDHVGGILGNAAMVAISMLAFLHLHQV-AYKEPPLER 240

[Close]

BLAST of Cp4.1LG14g06610 vs. ExPASy TrEMBL
Match: A0A6J1E4M7 (plastid division protein PDV1 OS=Cucurbita moschata OX=3662 GN=LOC111430740 PE=4 SV=1)

HSP 1 Score: 404 bits (1038), Expect = 4.47e-141
Identity = 217/266 (81.58%), Postives = 218/266 (81.95%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG---- 60
           MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG    
Sbjct: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNGVPDT 60

Query: 61  ------------------------------------------TVQVQQQVERDAAIARLE 120
                                                     TVQVQQQVERDAAIARLE
Sbjct: 61  AAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 120

Query: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNRSKRSNTLI 180
           QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPN SKRSNTLI
Sbjct: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNSSKRSNTLI 180

Query: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPELERHDIPFNRN 220
           KMLLSSLNFARTSLKMDHV GALGNAAMVAISMLAFLHLHQVVAYKKP+LERHDIPFNRN
Sbjct: 181 KMLLSSLNFARTSLKMDHVSGALGNAAMVAISMLAFLHLHQVVAYKKPQLERHDIPFNRN 240

[Close]

BLAST of Cp4.1LG14g06610 vs. ExPASy TrEMBL
Match: A0A6J1J7D9 (plastid division protein PDV1-like OS=Cucurbita maxima OX=3661 GN=LOC111483255 PE=4 SV=1)

HSP 1 Score: 394 bits (1011), Expect = 5.80e-137
Identity = 211/266 (79.32%), Postives = 216/266 (81.20%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG---- 60
           MKWDMEIEEIEVIL KIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKD KTPNG    
Sbjct: 1   MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPNGVPDT 60

Query: 61  ------------------------------------------TVQVQQQVERDAAIARLE 120
                                                     TVQVQQQVERDAAIARLE
Sbjct: 61  AAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 120

Query: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNRSKRSNTLI 180
           QSRIVLA+RLGDHHGKNYKVINEALAFVGDVRY ANYNSHENQYGQKPVPN SKRS+TLI
Sbjct: 121 QSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQYGQKPVPNSSKRSSTLI 180

Query: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPELERHDIPFNRN 220
           KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAY+KP+LERHDIPF+RN
Sbjct: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRKPQLERHDIPFDRN 240

[Close]

BLAST of Cp4.1LG14g06610 vs. ExPASy TrEMBL
Match: A0A6J1CG84 (plastid division protein PDV1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011397 PE=4 SV=1)

HSP 1 Score: 325 bits (833), Expect = 9.83e-110
Identity = 185/276 (67.03%), Postives = 197/276 (71.38%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG---- 60
           MKWDMEIEEIE +LEKIWD+HDKLSEAIHSISR HFLTSTKNLRKS NKDSKTPNG    
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  ---------------------------------------------TVQVQQQVERDAAIA 120
                                                        TVQVQQQVERDAAIA
Sbjct: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIA 120

Query: 121 RLEQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYG-------QKPVP 180
           RLEQSRIVLAMRL +HHGKNYKVINEALAFVGDVRY AN+ SHENQYG       QK +P
Sbjct: 121 RLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMP 180

Query: 181 NRSKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPEL 220
           N SKRSNTLIKML S+ NFA+ SLKMD+VGG L NAAMVAISMLAFLHLHQV A+K+   
Sbjct: 181 NSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQV-AFKQSSQ 240

[Close]

BLAST of Cp4.1LG14g06610 vs. ExPASy TrEMBL
Match: A0A6J1CGU5 (plastid division protein PDV1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011397 PE=4 SV=1)

HSP 1 Score: 325 bits (832), Expect = 1.44e-109
Identity = 185/277 (66.79%), Postives = 197/277 (71.12%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG---- 60
           MKWDMEIEEIE +LEKIWD+HDKLSEAIHSISR HFLTSTKNLRKS NKDSKTPNG    
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  ----------------------------------------------TVQVQQQVERDAAI 120
                                                         TVQVQQQVERDAAI
Sbjct: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHQTVQVQQQVERDAAI 120

Query: 121 ARLEQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYG-------QKPV 180
           ARLEQSRIVLAMRL +HHGKNYKVINEALAFVGDVRY AN+ SHENQYG       QK +
Sbjct: 121 ARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLM 180

Query: 181 PNRSKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPE 220
           PN SKRSNTLIKML S+ NFA+ SLKMD+VGG L NAAMVAISMLAFLHLHQV A+K+  
Sbjct: 181 PNSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQV-AFKQSS 240

[Close]

BLAST of Cp4.1LG14g06610 vs. ExPASy TrEMBL
Match: A0A5D3E713 (Plastid division protein PDV1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold788G00010 PE=4 SV=1)

HSP 1 Score: 320 bits (819), Expect = 1.52e-107
Identity = 186/280 (66.43%), Postives = 200/280 (71.43%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDS---KTPNG- 60
           MKWDMEIEEIE +LEKIWDLHDKLSEAIHSISR HFLTSTK+LRKSDN ++   K  N  
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNNNNNKDSNNA 60

Query: 61  -------------------------------------------------TVQVQQQVERD 120
                                                            TVQVQQQVERD
Sbjct: 61  PIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120

Query: 121 AAIARLEQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQ-------YGQ 180
           AAIARLEQSRIVLAMRL +HHGKNYKVI+EALAFVGDVRYAANY SHEN+        GQ
Sbjct: 121 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 180

Query: 181 KPVPNRSKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYK 220
           KP+PN SKRSNTLIKML S+++FAR SLKMDHVGG LGNAAMVAISM+AFLHLHQV AYK
Sbjct: 181 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQV-AYK 240

[Close]

BLAST of Cp4.1LG14g06610 vs. TAIR 10
Match: AT5G53280.1 (plastid division1 )

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 104/272 (38.24%), Postives = 143/272 (52.57%), Query Frame = 0


Query: 4   DMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNG------- 63
           +MEIEEIE +LEKIWDLHDKLS+ IH IS+ HFL S K   +S+ +  K P+G       
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKR--KNPHGNSGEDKR 62

Query: 64  ------------------------------------------TVQVQQQVERDAAIARLE 123
                                                     T+  QQ+ E+D AIARLE
Sbjct: 63  PGYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLE 122

Query: 124 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNRSK------ 183
           QSRI+LAMRL +HHGKNY V+ EALAFVG ++  ++Y S ++ Y     P+ +       
Sbjct: 123 QSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPDGI 182

Query: 184 RSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPELERHD 221
            SN +I    S+  FA+ +L  +HV G LGNAA+ AIS++A LHLHQV   +    ++ D
Sbjct: 183 ESNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKED 242

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g06610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK13	1.5e-38	38.24	Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1	[more]

BLAST of Cp4.1LG14g06610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922902.1	9.23e-141	81.58	plastid division protein PDV1 [Cucurbita moschata]	[more]
KAG7014727.1	4.22e-139	81.58	Plastid division protein PDV1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6576678.1	4.16e-138	81.58	Plastid division protein PDV1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022985171.1	1.20e-136	79.32	plastid division protein PDV1-like [Cucurbita maxima]	[more]
XP_038878155.1	1.81e-114	70.44	plastid division protein PDV1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG14g06610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4M7	4.47e-141	81.58	plastid division protein PDV1 OS=Cucurbita moschata OX=3662 GN=LOC111430740 PE=4...	[more]
A0A6J1J7D9	5.80e-137	79.32	plastid division protein PDV1-like OS=Cucurbita maxima OX=3661 GN=LOC111483255 P...	[more]
A0A6J1CG84	9.83e-110	67.03	plastid division protein PDV1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1CGU5	1.44e-109	66.79	plastid division protein PDV1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5D3E713	1.52e-107	66.43	Plastid division protein PDV1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Cp4.1LG14g06610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53280.1	1.1e-39	38.24	plastid division1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..212
None	No IPR available	PANTHER	PTHR33600:SF4	PLASTID DIVISION PROTEIN PDV1	coord: 1..50
None	No IPR available	PANTHER	PTHR33600:SF4	PLASTID DIVISION PROTEIN PDV1	coord: 57..220
IPR038939	Plastid division protein PDV1/PDV2	PANTHER	PTHR33600	PLASTID DIVISION PROTEIN PDV2	coord: 57..220 coord: 1..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g06610.1	Cp4.1LG14g06610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission