Cp4.1LG14g06550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g06550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor SPEECHLESS-like
Location	Cp4.1LG14: 313862 .. 316005 (-)
RNA-Seq Expression	Cp4.1LG14g06550
Synteny	Cp4.1LG14g06550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGCTACCCTCTCTTGATCTTGACAATATATTTTTTCCTCCATTTTGCTCTATCTATCTGGGTCCTTTTCTTTCCCTTTTTCAACACAAAAGCTCCAAACTTTGTGCTTCTTTAGCCCAACAGAACAAAAGGGTACAAACATGGTTGATAATTTAGCTGACTTTTTCCAACAAAATGAAGAATTTGTCGACCATACCACAAACCCCCAGTTGGAAGGATATGACCTCTTCAGCATCTTTGATAGTTTGGAGAATGTTGCAGAATTCAGTATGATCGAGGACGACACCGAGCTTGAGACTTCCCCTAAAACCAAGCGCTTGAAACTGAACGGTTCCGCTATGGCTGGTGTCTCTTCCTCAGAGGATGCAAACCCTGATGGAGCACAAAGAATGTCTCACATCACGGTAGAGCGCAACCGTAGGAAGCAAATGAACGAGCACTTGTCGGTGTTGAGATCGCTCATGCCTTGTTTCTATGTCAAGAAAGTATGTTGAAAATTTTTGAGAATATGATTTCATTTCAGGGCTTTGTGTTGAATGATATTATATTGTTGTTGAATGTGGTTTTAGGGAGATCAAGCTTCAATAATTGGAGGGGTGGTGGAATACATCAAAGAGTTGCAACAAGTTCTTCAATCACTAGAGGCCAAAAAGCAAAGGAAAGTGTATAGTGAAGTGTTGAGCCCTAGGGTTGTTTCAAGTCCAAGGCCTTTGCCAATGAGTCCAAGAAAGCCACCACCACTAAGTCCTCGCCTTAACTTGCCAATTAGTCCAAGAACCCCACAACCCACTAGCCCTTACAGCAAGCCTCCAAGGTTGCAACAGCCTCCCACCACCGATATGGCTAATAACAACATCAGCACAGTAGAGCCATCGCCCTGTAATTCATCTTCCACCACAAATTCCTCCATTGACAATGGTAACAATGGTAACAACGGTAACAATGATCTTGTGGCGAATTCAAAATCCGGCATAGCTGAAGTTGAGGTGAAGTTTACAGGTCCAAATGTGGTTTTGAAGACAGTTTCTGCTCCAATCCCTGGACAAGCTGTTAAGATCATTGCTGCCCTTGAACAACTCTCCCTAGAAATTCTCCATGTCAAGATCACCACCGTTGATGATACCATGTTTAACTCTTTTACAATTAAGGTATGCATAATCTTTGTTTTTATTTTTTCAAAACTAAGTTTATAAACACAATTTCAAAACCAAACAAAAGATGTTTTAATTATCAAAGGAGAGTCAAGTTACTAGCTTTCACTACTCTTTTGCCTCGTTTTCCGTGCAGCTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTGTTTTATGAGAATCATTTCATAACTCATTAAGGGTTTTGGGTTTTAGAGAATTGAAGTCATCAATTTGAGAAAGATTTCATCTGGGGTTTTCTTTTCTTAAAAAAAAAAAGAAAATTTTCATTGAAATGATATATGGGTTGTGTTTCGTTTTGTGTAATTTGAGCACAAGCACCAAAGCACTCCATTGTTTGCCATGTTGAAGGTTCGTTTAAGCTCACAGATGGCTTCCATGCACGAACTAAAATGGCTCGAATTTCCGAGCTGAAATGATACCCATTTTTGCATGTTCAGAGGAGAAAAATCCCAGCTTTATACACAAATTTGCATCTTTTATCGTTTTATCTTCATTTTTCAGTGAATTAATCAGTGGATCAATCATATTGATTGTTTATTTTCCTTTTATAGATCGGAATTGAATGCCAACTTAGTGCAGAGGAACTGGCTCACCAAATTCAGCAAACATTCTGCTAATTGAAGTCCAGAATTGAAGGAGGAGGAGTTTTGGTTACTTAATTGTGTCTGCACAAAGAGAATCCTCTTTACAAATTAATGTAACTCTCTTTCTTCAATTCTTTTTTCAACTAAAATTCCTCTTTTCATTTATGTAATAGATAGAT

mRNA sequence

TAGGCTACCCTCTCTTGATCTTGACAATATATTTTTTCCTCCATTTTGCTCTATCTATCTGGGTCCTTTTCTTTCCCTTTTTCAACACAAAAGCTCCAAACTTTGTGCTTCTTTAGCCCAACAGAACAAAAGGGTACAAACATGGTTGATAATTTAGCTGACTTTTTCCAACAAAATGAAGAATTTGTCGACCATACCACAAACCCCCAGTTGGAAGGATATGACCTCTTCAGCATCTTTGATAGTTTGGAGAATGTTGCAGAATTCAGTATGATCGAGGACGACACCGAGCTTGAGACTTCCCCTAAAACCAAGCGCTTGAAACTGAACGGTTCCGCTATGGCTGGTGTCTCTTCCTCAGAGGATGCAAACCCTGATGGAGCACAAAGAATGTCTCACATCACGGTAGAGCGCAACCGTAGGAAGCAAATGAACGAGCACTTGTCGGTGTTGAGATCGCTCATGCCTTGTTTCTATGTCAAGAAAGGAGATCAAGCTTCAATAATTGGAGGGGTGGTGGAATACATCAAAGAGTTGCAACAAGTTCTTCAATCACTAGAGGCCAAAAAGCAAAGGAAAGTGTATAGTGAAGTGTTGAGCCCTAGGGTTGTTTCAAGTCCAAGGCCTTTGCCAATGAGTCCAAGAAAGCCACCACCACTAAGTCCAAATGTGGTTTTGAAGACAGTTTCTGCTCCAATCCCTGGACAAGCTGTTAAGATCATTGCTGCCCTTGAACAACTCTCCCTAGAAATTCTCCATGTCAAGATCACCACCGTTGATGATACCATGTTTAACTCTTTTACAATTAAGATCGGAATTGAATGCCAACTTAGTGCAGAGGAACTGGCTCACCAAATTCAGCAAACATTCTGCTAATTGAAGTCCAGAATTGAAGGAGGAGGAGTTTTGGTTACTTAATTGTGTCTGCACAAAGAGAATCCTCTTTACAAATTAATGTAACTCTCTTTCTTCAATTCTTTTTTCAACTAAAATTCCTCTTTTCATTTATGTAATAGATAGAT

Coding sequence (CDS)

ATGGTTGATAATTTAGCTGACTTTTTCCAACAAAATGAAGAATTTGTCGACCATACCACAAACCCCCAGTTGGAAGGATATGACCTCTTCAGCATCTTTGATAGTTTGGAGAATGTTGCAGAATTCAGTATGATCGAGGACGACACCGAGCTTGAGACTTCCCCTAAAACCAAGCGCTTGAAACTGAACGGTTCCGCTATGGCTGGTGTCTCTTCCTCAGAGGATGCAAACCCTGATGGAGCACAAAGAATGTCTCACATCACGGTAGAGCGCAACCGTAGGAAGCAAATGAACGAGCACTTGTCGGTGTTGAGATCGCTCATGCCTTGTTTCTATGTCAAGAAAGGAGATCAAGCTTCAATAATTGGAGGGGTGGTGGAATACATCAAAGAGTTGCAACAAGTTCTTCAATCACTAGAGGCCAAAAAGCAAAGGAAAGTGTATAGTGAAGTGTTGAGCCCTAGGGTTGTTTCAAGTCCAAGGCCTTTGCCAATGAGTCCAAGAAAGCCACCACCACTAAGTCCAAATGTGGTTTTGAAGACAGTTTCTGCTCCAATCCCTGGACAAGCTGTTAAGATCATTGCTGCCCTTGAACAACTCTCCCTAGAAATTCTCCATGTCAAGATCACCACCGTTGATGATACCATGTTTAACTCTTTTACAATTAAGATCGGAATTGAATGCCAACTTAGTGCAGAGGAACTGGCTCACCAAATTCAGCAAACATTCTGCTAA

Protein sequence

MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRLKLNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSAEELAHQIQQTFC

Homology

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BLAST of Cp4.1LG14g06550 vs. ExPASy Swiss-Prot
Match: Q700C7 (Transcription factor SPEECHLESS OS=Arabidopsis thaliana OX=3702 GN=SPCH PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.2e-61
Identity = 167/369 (45.26%), Postives = 191/369 (51.76%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFS----------------M 60
           M + + DF ++  EFVD      L G DLF+I +SLE   E S                +
Sbjct: 1   MQEIIPDFLEEC-EFVD----TSLAGDDLFAILESLEGAGEISPTAASTPKDGTTSSKEL 60

Query: 61  IEDDTELETSPKTKRLKL-------NGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQM 120
           ++D     +SPK K+ +L                + ED   DG Q+MSH+TVERNRRKQM
Sbjct: 61  VKDQDYENSSPKRKKQRLETRKEEDEEEEDGDGEAEEDNKQDGQQKMSHVTVERNRRKQM 120

Query: 121 NEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVV 180
           NEHL+VLRSLMPCFYVK+GDQASIIGGVVEYI ELQQVLQSLEAKKQRK Y+EVLSPRVV
Sbjct: 121 NEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVV 180

Query: 181 SSPRPLP--MSPRKP-----------------PPLSP----------------------- 240
            SPRP P  +SPRKP                 PP+SP                       
Sbjct: 181 PSPRPSPPVLSPRKPPLSPRINHHQIHHHLLLPPISPRTPQPTSPYRAIPPQLPLIPQPP 240

Query: 241 ------------------------------------------------------------ 245
                                                                       
Sbjct: 241 LRSYSSLASCSSLGDPPPYSPASSSSSPSVSSNHESSVINELVANSKSALADVEVKFSGA 300

[Close]

BLAST of Cp4.1LG14g06550 vs. ExPASy Swiss-Prot
Match: Q9M8K6 (Transcription factor MUTE OS=Arabidopsis thaliana OX=3702 GN=MUTE PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-34
Identity = 87/192 (45.31%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 84  MSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKK 143
           MSHI VERNRR+QMNEHL  LRSL PCFY+K+GDQASIIGGV+E+IKELQQ++Q LE+KK
Sbjct: 1   MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60

Query: 144 QRKVYSEVLSP--RVVSSPRPLPMSPRKPP------------------------------ 203
           +RK  +    P       P  L  +  + P                              
Sbjct: 61  RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120

Query: 204 PLSPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLS 244
               NVVL+ VS  I GQ VKII+ LE+LS ++LH+ I+++++T+   F +KIG+EC LS
Sbjct: 121 ISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHLS 180

[Close]

BLAST of Cp4.1LG14g06550 vs. ExPASy Swiss-Prot
Match: Q56YJ8 (Transcription factor FAMA OS=Arabidopsis thaliana OX=3702 GN=FAMA PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.9e-31
Identity = 94/235 (40.00%), Postives = 131/235 (55.74%), Query Frame = 0


Query: 46  EDDTELETSPKTKRLKLNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLR 105
           E+D E +   K K +K          +SE+     +QRM+HI VERNRRKQMNEHL VLR
Sbjct: 163 EEDRENKNVTK-KEVKSKRKRARTSKTSEEVE---SQRMTHIAVERNRRKQMNEHLRVLR 222

Query: 106 SLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEV---LSPRVVSSPRP 165
           SLMP  YV++GDQASIIGG +E+++EL+Q+LQ LE++K+R++  E    ++    SS  P
Sbjct: 223 SLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSP 282

Query: 166 LPMSPRKPPPL--SPNV--------------------------------VLKTVSAPIPG 225
           +     +  PL  + NV                                ++K +S   PG
Sbjct: 283 ITTVANQAQPLIITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPG 342

Query: 226 QAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSAEELAHQIQQTF 244
           Q +K IAALE L L ILH  ITT++ T+  SF +KI  E + +AE++A  IQQ F
Sbjct: 343 QLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVKITSETRFTAEDIASSIQQIF 393

[Close]

BLAST of Cp4.1LG14g06550 vs. ExPASy Swiss-Prot
Match: Q9SK91 (Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 2.2e-22
Identity = 68/184 (36.96%), Postives = 107/184 (58.15%), Query Frame = 0


Query: 82  QRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEA 141
           QRM+HI VERNRRKQMNE+L+VLRSLMP  Y ++GDQASI+GG + Y+KEL+ +LQS+E 
Sbjct: 113 QRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEP 172

Query: 142 KKQR--------KVYSEVLSPRV---------VSSPRPLPMSPRKPPPLSPNVV-----L 201
           K+ R           S ++ P             S   +P S   P  +   V      +
Sbjct: 173 KRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSPAEIEVTVAESHANI 232

Query: 202 KTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQL-SAEELAHQ 243
           K ++   P Q +K+I +L+ L L +LH+ +TT+ +++  S ++++    QL + +++A  
Sbjct: 233 KIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDIATA 292

[Close]

BLAST of Cp4.1LG14g06550 vs. ExPASy Swiss-Prot
Match: Q9M128 (Transcription factor bHLH57 OS=Arabidopsis thaliana OX=3702 GN=BHLH57 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.5e-22
Identity = 73/188 (38.83%), Postives = 106/188 (56.38%), Query Frame = 0


Query: 82  QRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEA 141
           QRM+HI VERNRR+QMNEHL+ LRSLMP  ++++GDQASI+GG +++IKEL+Q+LQSLEA
Sbjct: 113 QRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEA 172

Query: 142 KKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP-------------------------N 201
           +K++    E       SS   L  +      +S                          +
Sbjct: 173 EKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEVEATVIQNH 232

Query: 202 VVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQL-SAEEL 244
           V LK        Q +K I ++E+L L ILH+ I++  D +  SF +K+   C+L SA+E+
Sbjct: 233 VSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMEDGCKLGSADEI 292

[Close]

BLAST of Cp4.1LG14g06550 vs. NCBI nr
Match: XP_023553170.1 (transcription factor SPEECHLESS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430 bits (1105), Expect = 1.42e-149
Identity = 244/329 (74.16%), Postives = 244/329 (74.16%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL 60
           MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL
Sbjct: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL 60

Query: 61  KLNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS 120
           KLNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS
Sbjct: 61  KLNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS 120

Query: 121 IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP----- 180
           IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP     
Sbjct: 121 IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSPRLNLP 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ISPRTPQPTSPYSKPPRLQQPPTTDMANNNISTVEPSPCNSSSTTNSSIDNGNNGNNGNN 240

Query: 241 --------------------NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDT 244
                               NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDT
Sbjct: 241 DLVANSKSGIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDT 300

[Close]

BLAST of Cp4.1LG14g06550 vs. NCBI nr
Match: KAG6576672.1 (Transcription factor SPEECHLESS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 428 bits (1100), Expect = 9.12e-149
Identity = 243/332 (73.19%), Postives = 244/332 (73.49%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL 60
           MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL
Sbjct: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL 60

Query: 61  KLNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS 120
           K+NGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS
Sbjct: 61  KMNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS 120

Query: 121 IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP----- 180
           IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP     
Sbjct: 121 IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSPRLNLP 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ISPRTPQPTSPYSKPPRLQQPPTTDMANNNISTVEPSPCNSSSTTNSSIDNGNNGNNGNN 240

Query: 241 -----------------------NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTV 244
                                  NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTV
Sbjct: 241 GNNDLVANSKSGIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTV 300

[Close]

BLAST of Cp4.1LG14g06550 vs. NCBI nr
Match: KAG7014722.1 (Transcription factor SPEECHLESS, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 428 bits (1100), Expect = 3.33e-148
Identity = 243/332 (73.19%), Postives = 244/332 (73.49%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL 60
           MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL
Sbjct: 38  MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL 97

Query: 61  KLNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS 120
           K+NGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS
Sbjct: 98  KMNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS 157

Query: 121 IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP----- 180
           IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP     
Sbjct: 158 IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSPRLNLP 217

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 218 ISPRTPQPTSPYSKPPRLQQPPTTDMANNNISTVEPSPCNSSSTTNSSIDNGNNGNNGNN 277

Query: 241 -----------------------NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTV 244
                                  NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTV
Sbjct: 278 GNNDLVANSKSGIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTV 337

[Close]

BLAST of Cp4.1LG14g06550 vs. NCBI nr
Match: XP_022922947.1 (transcription factor SPEECHLESS-like [Cucurbita moschata])

HSP 1 Score: 426 bits (1094), Expect = 6.72e-148
Identity = 242/329 (73.56%), Postives = 243/329 (73.86%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL 60
           MVDNLADFFQQNEEFVDHTT PQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL
Sbjct: 1   MVDNLADFFQQNEEFVDHTTIPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL 60

Query: 61  KLNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS 120
           K+NGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS
Sbjct: 61  KMNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS 120

Query: 121 IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP----- 180
           IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP     
Sbjct: 121 IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSPRLNLP 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ISPRTPQPTSPYSKPPRLQQPPTTDMANNNISTVEPSPCNSSSTTNSSIDNGNNGNNGNN 240

Query: 241 --------------------NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDT 244
                               NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDT
Sbjct: 241 DLVANSKSGIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDT 300

[Close]

BLAST of Cp4.1LG14g06550 vs. NCBI nr
Match: XP_022984807.1 (transcription factor SPEECHLESS-like [Cucurbita maxima])

HSP 1 Score: 406 bits (1043), Expect = 4.45e-140
Identity = 238/333 (71.47%), Postives = 241/333 (72.37%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEG-YDLFSIFDSLENVAEFSMIEDDTELETSPKTKR 60
           MVDNLADFFQQNEEFVDHTTNPQLEG YDLFSIFD+LENVAEFSMIEDDTELETSPKTKR
Sbjct: 1   MVDNLADFFQQNEEFVDHTTNPQLEGGYDLFSIFDTLENVAEFSMIEDDTELETSPKTKR 60

Query: 61  LKLNGS-----AMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVK 120
           LK+  +     AMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVK
Sbjct: 61  LKVTAATSPTTAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVK 120

Query: 121 KGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVV-SSPRPLPMSPRKPPPL 180
           KGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVV SSPRP PMSPRKPPPL
Sbjct: 121 KGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVVSSPRPFPMSPRKPPPL 180

Query: 181 SP---------------------------------------------------------- 240
           SP                                                          
Sbjct: 181 SPRLNLPISPRTPQPTSPYSKPPRLQQPPTTDMANNNNSTGEPSPCNSSSTTNSSIDNGN 240

Query: 241 ------------------------NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITT 244
                                   NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITT
Sbjct: 241 NGNNDLVANSKSGIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITT 300

[Close]

BLAST of Cp4.1LG14g06550 vs. ExPASy TrEMBL
Match: A0A6J1E4S7 (transcription factor SPEECHLESS-like OS=Cucurbita moschata OX=3662 GN=LOC111430774 PE=4 SV=1)

HSP 1 Score: 426 bits (1094), Expect = 3.25e-148
Identity = 242/329 (73.56%), Postives = 243/329 (73.86%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL 60
           MVDNLADFFQQNEEFVDHTT PQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL
Sbjct: 1   MVDNLADFFQQNEEFVDHTTIPQLEGYDLFSIFDSLENVAEFSMIEDDTELETSPKTKRL 60

Query: 61  KLNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS 120
           K+NGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS
Sbjct: 61  KMNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQAS 120

Query: 121 IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP----- 180
           IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP     
Sbjct: 121 IIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSPRLNLP 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ISPRTPQPTSPYSKPPRLQQPPTTDMANNNISTVEPSPCNSSSTTNSSIDNGNNGNNGNN 240

Query: 241 --------------------NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDT 244
                               NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDT
Sbjct: 241 DLVANSKSGIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDT 300

[Close]

BLAST of Cp4.1LG14g06550 vs. ExPASy TrEMBL
Match: A0A6J1J367 (transcription factor SPEECHLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111482981 PE=4 SV=1)

HSP 1 Score: 406 bits (1043), Expect = 2.16e-140
Identity = 238/333 (71.47%), Postives = 241/333 (72.37%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEG-YDLFSIFDSLENVAEFSMIEDDTELETSPKTKR 60
           MVDNLADFFQQNEEFVDHTTNPQLEG YDLFSIFD+LENVAEFSMIEDDTELETSPKTKR
Sbjct: 1   MVDNLADFFQQNEEFVDHTTNPQLEGGYDLFSIFDTLENVAEFSMIEDDTELETSPKTKR 60

Query: 61  LKLNGS-----AMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVK 120
           LK+  +     AMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVK
Sbjct: 61  LKVTAATSPTTAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVK 120

Query: 121 KGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVV-SSPRPLPMSPRKPPPL 180
           KGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVV SSPRP PMSPRKPPPL
Sbjct: 121 KGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVVSSPRPFPMSPRKPPPL 180

Query: 181 SP---------------------------------------------------------- 240
           SP                                                          
Sbjct: 181 SPRLNLPISPRTPQPTSPYSKPPRLQQPPTTDMANNNNSTGEPSPCNSSSTTNSSIDNGN 240

Query: 241 ------------------------NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITT 244
                                   NVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITT
Sbjct: 241 NGNNDLVANSKSGIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITT 300

[Close]

BLAST of Cp4.1LG14g06550 vs. ExPASy TrEMBL
Match: A0A0A0L7S9 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G354520 PE=4 SV=1)

HSP 1 Score: 336 bits (861), Expect = 4.11e-112
Identity = 215/376 (57.18%), Postives = 225/376 (59.84%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDD------------ 60
           MVD  AD FQQN+EFVDHT NP  EG DLFSIF+SLENVAEF+MIEDD            
Sbjct: 1   MVDTFADLFQQNDEFVDHTLNPHFEGDDLFSIFESLENVAEFTMIEDDIEPVKDGEETTS 60

Query: 61  -----TELETSPKTKRLKLNGSAM-------AGVSSSEDANPDGAQRMSHITVERNRRKQ 120
                TELETSPKTKRLK   +          G+SSSED NPDG QRMSHITVERNRRKQ
Sbjct: 61  LVFSETELETSPKTKRLKTIAATSPTAAMTSTGLSSSEDPNPDGPQRMSHITVERNRRKQ 120

Query: 121 MNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKV-YSEVLSPR 180
           MNEHL+VLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKV YSEVLSPR
Sbjct: 121 MNEHLTVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVVYSEVLSPR 180

Query: 181 VVSSPRP-LPMSPRKPP-------PLSP-------------------------------- 240
           VVSSPRP L MSPRKPP       P+SP                                
Sbjct: 181 VVSSPRPNLAMSPRKPPLSPRLNLPISPRTPQPTSPYSKPPPRLQQPPSAATGGGAYNIP 240

Query: 241 ------------------------------------------------------------ 244
                                                                       
Sbjct: 241 SSSSSTTNMANNNSLEPSPCNSCSTTNSSIDNNNNNNNSNSNSNNNNDLVANSKSAIAEV 300

[Close]

BLAST of Cp4.1LG14g06550 vs. ExPASy TrEMBL
Match: A0A5A7U5B2 (Transcription factor SPEECHLESS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00130 PE=4 SV=1)

HSP 1 Score: 335 bits (860), Expect = 6.03e-112
Identity = 215/377 (57.03%), Postives = 225/377 (59.68%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTE---------- 60
           MVD  AD FQQN+EFVDHT NP  EG DLFSIF+SLENVAEF+MIEDDTE          
Sbjct: 1   MVDTFADLFQQNDEFVDHTLNPHFEGDDLFSIFESLENVAEFTMIEDDTEPVKDGEETTS 60

Query: 61  -------LETSPKTKRLKLNGSAM-------AGVSSSEDANPDGAQRMSHITVERNRRKQ 120
                  LETSPKTKRLK   +          G+SSSED NPDG QRMSHITVERNRRKQ
Sbjct: 61  LVFSETELETSPKTKRLKTIAATSPTAAMTSTGLSSSEDPNPDGPQRMSHITVERNRRKQ 120

Query: 121 MNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKV-YSEVLSPR 180
           MNEHL+VLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKV YSEVLSPR
Sbjct: 121 MNEHLTVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVVYSEVLSPR 180

Query: 181 VVSSPRP-LPMSPRKPP-------PLSP-------------------------------- 240
           VVSSPRP L MSPRKPP       P+SP                                
Sbjct: 181 VVSSPRPNLAMSPRKPPLSPRLNLPISPRTPQPTSPYSKPPPRLQQTPSAATGGGAYNNI 240

Query: 241 ------------------------------------------------------------ 244
                                                                       
Sbjct: 241 SSSSSSTTNMANNNNSLEPSPCNSCSTTNSSIDNNNNNNSNSNSNNNNDLVANSKSAIAE 300

[Close]

BLAST of Cp4.1LG14g06550 vs. ExPASy TrEMBL
Match: A0A1S3CNN8 (transcription factor SPEECHLESS OS=Cucumis melo OX=3656 GN=LOC103503016 PE=4 SV=1)

HSP 1 Score: 335 bits (860), Expect = 6.03e-112
Identity = 215/377 (57.03%), Postives = 225/377 (59.68%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFSMIEDDTE---------- 60
           MVD  AD FQQN+EFVDHT NP  EG DLFSIF+SLENVAEF+MIEDDTE          
Sbjct: 1   MVDTFADLFQQNDEFVDHTLNPHFEGDDLFSIFESLENVAEFTMIEDDTEPVKDGEETTS 60

Query: 61  -------LETSPKTKRLKLNGSAM-------AGVSSSEDANPDGAQRMSHITVERNRRKQ 120
                  LETSPKTKRLK   +          G+SSSED NPDG QRMSHITVERNRRKQ
Sbjct: 61  LVFSETELETSPKTKRLKTIAATSPTAAMTSTGLSSSEDPNPDGPQRMSHITVERNRRKQ 120

Query: 121 MNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKV-YSEVLSPR 180
           MNEHL+VLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKV YSEVLSPR
Sbjct: 121 MNEHLTVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVVYSEVLSPR 180

Query: 181 VVSSPRP-LPMSPRKPP-------PLSP-------------------------------- 240
           VVSSPRP L MSPRKPP       P+SP                                
Sbjct: 181 VVSSPRPNLAMSPRKPPLSPRLNLPISPRTPQPTSPYSKPPPRLQQTPSAATGGGAYNNI 240

Query: 241 ------------------------------------------------------------ 244
                                                                       
Sbjct: 241 SSSSSSTTNMANNNNSLEPSPCNSCSTTNSSIDNNNNNNSNSNSNNNNDLVANSKSAIAE 300

[Close]

BLAST of Cp4.1LG14g06550 vs. TAIR 10
Match: AT5G53210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 236.1 bits (601), Expect = 3.0e-62
Identity = 167/369 (45.26%), Postives = 191/369 (51.76%), Query Frame = 0


Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGYDLFSIFDSLENVAEFS----------------M 60
           M + + DF ++  EFVD      L G DLF+I +SLE   E S                +
Sbjct: 1   MQEIIPDFLEEC-EFVD----TSLAGDDLFAILESLEGAGEISPTAASTPKDGTTSSKEL 60

Query: 61  IEDDTELETSPKTKRLKL-------NGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQM 120
           ++D     +SPK K+ +L                + ED   DG Q+MSH+TVERNRRKQM
Sbjct: 61  VKDQDYENSSPKRKKQRLETRKEEDEEEEDGDGEAEEDNKQDGQQKMSHVTVERNRRKQM 120

Query: 121 NEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVV 180
           NEHL+VLRSLMPCFYVK+GDQASIIGGVVEYI ELQQVLQSLEAKKQRK Y+EVLSPRVV
Sbjct: 121 NEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVV 180

Query: 181 SSPRPLP--MSPRKP-----------------PPLSP----------------------- 240
            SPRP P  +SPRKP                 PP+SP                       
Sbjct: 181 PSPRPSPPVLSPRKPPLSPRINHHQIHHHLLLPPISPRTPQPTSPYRAIPPQLPLIPQPP 240

Query: 241 ------------------------------------------------------------ 245
                                                                       
Sbjct: 241 LRSYSSLASCSSLGDPPPYSPASSSSSPSVSSNHESSVINELVANSKSALADVEVKFSGA 300

[Close]

BLAST of Cp4.1LG14g06550 vs. TAIR 10
Match: AT3G06120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 146.4 bits (368), Expect = 3.1e-35
Identity = 87/192 (45.31%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 84  MSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKK 143
           MSHI VERNRR+QMNEHL  LRSL PCFY+K+GDQASIIGGV+E+IKELQQ++Q LE+KK
Sbjct: 1   MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60

Query: 144 QRKVYSEVLSP--RVVSSPRPLPMSPRKPP------------------------------ 203
           +RK  +    P       P  L  +  + P                              
Sbjct: 61  RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120

Query: 204 PLSPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLS 244
               NVVL+ VS  I GQ VKII+ LE+LS ++LH+ I+++++T+   F +KIG+EC LS
Sbjct: 121 ISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHLS 180

[Close]

BLAST of Cp4.1LG14g06550 vs. TAIR 10
Match: AT3G24140.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 4.2e-32
Identity = 94/235 (40.00%), Postives = 131/235 (55.74%), Query Frame = 0


Query: 46  EDDTELETSPKTKRLKLNGSAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLR 105
           E+D E +   K K +K          +SE+     +QRM+HI VERNRRKQMNEHL VLR
Sbjct: 163 EEDRENKNVTK-KEVKSKRKRARTSKTSEEVE---SQRMTHIAVERNRRKQMNEHLRVLR 222

Query: 106 SLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEV---LSPRVVSSPRP 165
           SLMP  YV++GDQASIIGG +E+++EL+Q+LQ LE++K+R++  E    ++    SS  P
Sbjct: 223 SLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSP 282

Query: 166 LPMSPRKPPPL--SPNV--------------------------------VLKTVSAPIPG 225
           +     +  PL  + NV                                ++K +S   PG
Sbjct: 283 ITTVANQAQPLIITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPG 342

Query: 226 QAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSAEELAHQIQQTF 244
           Q +K IAALE L L ILH  ITT++ T+  SF +KI  E + +AE++A  IQQ F
Sbjct: 343 QLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVKITSETRFTAEDIASSIQQIF 393

[Close]

BLAST of Cp4.1LG14g06550 vs. TAIR 10
Match: AT1G22490.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-23
Identity = 68/184 (36.96%), Postives = 107/184 (58.15%), Query Frame = 0


Query: 82  QRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEA 141
           QRM+HI VERNRRKQMNE+L+VLRSLMP  Y ++GDQASI+GG + Y+KEL+ +LQS+E 
Sbjct: 113 QRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEP 172

Query: 142 KKQR--------KVYSEVLSPRV---------VSSPRPLPMSPRKPPPLSPNVV-----L 201
           K+ R           S ++ P             S   +P S   P  +   V      +
Sbjct: 173 KRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSPAEIEVTVAESHANI 232

Query: 202 KTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQL-SAEELAHQ 243
           K ++   P Q +K+I +L+ L L +LH+ +TT+ +++  S ++++    QL + +++A  
Sbjct: 233 KIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDIATA 292

[Close]

BLAST of Cp4.1LG14g06550 vs. TAIR 10
Match: AT4G01460.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 6.0e-23
Identity = 73/188 (38.83%), Postives = 106/188 (56.38%), Query Frame = 0


Query: 82  QRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEA 141
           QRM+HI VERNRR+QMNEHL+ LRSLMP  ++++GDQASI+GG +++IKEL+Q+LQSLEA
Sbjct: 113 QRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEA 172

Query: 142 KKQRKVYSEVLSPRVVSSPRPLPMSPRKPPPLSP-------------------------N 201
           +K++    E       SS   L  +      +S                          +
Sbjct: 173 EKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEVEATVIQNH 232

Query: 202 VVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQL-SAEEL 244
           V LK        Q +K I ++E+L L ILH+ I++  D +  SF +K+   C+L SA+E+
Sbjct: 233 VSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMEDGCKLGSADEI 292

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g06550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q700C7	4.2e-61	45.26	Transcription factor SPEECHLESS OS=Arabidopsis thaliana OX=3702 GN=SPCH PE=1 SV=...	[more]
Q9M8K6	4.3e-34	45.31	Transcription factor MUTE OS=Arabidopsis thaliana OX=3702 GN=MUTE PE=2 SV=1	[more]
Q56YJ8	5.9e-31	40.00	Transcription factor FAMA OS=Arabidopsis thaliana OX=3702 GN=FAMA PE=1 SV=1	[more]
Q9SK91	2.2e-22	36.96	Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2	[more]
Q9M128	8.5e-22	38.83	Transcription factor bHLH57 OS=Arabidopsis thaliana OX=3702 GN=BHLH57 PE=1 SV=1	[more]

BLAST of Cp4.1LG14g06550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553170.1	1.42e-149	74.16	transcription factor SPEECHLESS-like [Cucurbita pepo subsp. pepo]	[more]
KAG6576672.1	9.12e-149	73.19	Transcription factor SPEECHLESS, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7014722.1	3.33e-148	73.19	Transcription factor SPEECHLESS, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022922947.1	6.72e-148	73.56	transcription factor SPEECHLESS-like [Cucurbita moschata]	[more]
XP_022984807.1	4.45e-140	71.47	transcription factor SPEECHLESS-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG14g06550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4S7	3.25e-148	73.56	transcription factor SPEECHLESS-like OS=Cucurbita moschata OX=3662 GN=LOC1114307...	[more]
A0A6J1J367	2.16e-140	71.47	transcription factor SPEECHLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111482981...	[more]
A0A0A0L7S9	4.11e-112	57.18	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G354520 PE=4 S...	[more]
A0A5A7U5B2	6.03e-112	57.03	Transcription factor SPEECHLESS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CNN8	6.03e-112	57.03	transcription factor SPEECHLESS OS=Cucumis melo OX=3656 GN=LOC103503016 PE=4 SV=...	[more]

BLAST of Cp4.1LG14g06550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53210.1	3.0e-62	45.26	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06120.1	3.1e-35	45.31	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G24140.1	4.2e-32	40.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G22490.1	1.6e-23	36.96	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G01460.1	6.0e-23	38.83	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 125..145
None	No IPR available	PANTHER	PTHR46684:SF4	TRANSCRIPTION FACTOR SPEECHLESS	coord: 174..244
None	No IPR available	PANTHER	PTHR46684:SF4	TRANSCRIPTION FACTOR SPEECHLESS	coord: 46..175
None	No IPR available	CDD	cd11448	bHLH_AtFAMA_like	coord: 84..157 e-value: 9.60973E-46 score: 145.568
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 87..138 e-value: 5.0E-12 score: 56.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 82..133 e-value: 2.4E-12 score: 46.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 81..132 score: 15.783181
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 73..147 e-value: 7.2E-15 score: 56.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 80..156
IPR044283	Transcription factor FAMA/SPEECHLESS/MUTE	PANTHER	PTHR46684	TRANSCRIPTION FACTOR FAMA	coord: 174..244 coord: 46..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g06550.1	Cp4.1LG14g06550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity