Cp4.1LG14g06520 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g06520
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein REVEILLE 6-like isoform X1
Location	Cp4.1LG14: 448709 .. 450418 (+)
RNA-Seq Expression	Cp4.1LG14g06520
Synteny	Cp4.1LG14g06520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTACCGTTCGACACTGCTGCAACGTCGTTGCGAGATGATCTATTGAAGAGAGCTCGGAAACCTTACACCATCACCAAGTGCAGAGAGAGCTGGACTGAGCCTGAGCACGATAAGTTCCTCGAAGCTATTCAACTGTATGATCTTCTCTCTCCGATATATTTTCGAGCTTCTTTGTTCTTCTTCATCCTCCTGTTTTTCTCTTTTTTGTTGTGGATATTTTTTTAATTCGATTTAAAATTTTGCCCGTCTTGATAAGATTTCGTATCTCTGTGCGGTTTTATGCTCGTATCCGGCATCGTCTTTGATTTGTGGTTTCTGAATTCACGAGTGGAGGCCGCGCGATTTGTTTTCGGAGTGATTTTGGAGTATTTGACTGTTTGTTTTGTTTTCTTTCATCAGGAGAGGAATTCTGGTCTGTTTTTTGATTATTTGGAAGAAATGTCCGGAAGCATTTGAATTGTTGCTTTTGTGTTTGTTTCCGATCTAATCGTTCGTGTATCTTCTCTTTGATTGTATGCTTCAGATTTGATCGTGACTGGAAGAAGATTGAGGCCTTTGTAGGGTCGAAGACCGTCATTCAGGTAATGGACACACTCGTCTTACGTCCCATTTTTATCCTACGAATCTAATGAACAAATCTGGAATGTTTTCGTTCTTTTCTCGTTAGATATCGAGAAATAACGATGTTATTCGTCTTTCTGGAATTTTTGTTCTTCAATAGCGTTTCTAAGATTATAGATAAGTTCTGGAATTTAAAGATTATGAAGTAAATATAATATCCTGTTACGTTTGGTCAAAACAAATCATGCTCGAATTCTTCAAGCTTTGGCTCTTCTATTATAAGTAGTCTAAAGATGATGATTCTTATCAGATACGAAGTCACGCTCAGAAGTACTTCCTGAAGGTTGAGAAGAGTGGGACAGGCGAACACTTACCTCCTCCACGACNGGCGTGTTGGACGATGCACCGTCTTTATCGGTCACATCATGACACTTATCCAGCTCTCACATGTCTCGATAGGCACCACTTGCATATCGTGTTTCGAATGACTACGCATAGAGTCTCACAACCTACTATTTTCTTAGTACAATCGTGACATTCTCTCTCACTTAAACTAGTCATCATATTCAATATTTTTCGGAAACACAATTACCTAGTGGAATCTGAGACCATCGTGAAATGTTGTTTTTGTTGGTGGTGTTTGTGAAGGAAGAGATATTGGATGAGACTGACGAATACGTTGCTGTTCATAACAAGTAAGTGCTGATTTCTTTATAAAATTTTATTTTTACAAGTTTGTGGTAATAATGAATCATATTTGTGTAAAAAATACAGGCTGAAAGTGAATATGAGAGTAAGGAGATCAAAGTCAGAATCTCCAGGAGCAGCCCATCTGCGCTGGATATCACCAATGCCATCCCCACTGTCTTCATACCATCACTCTCCACTTTCTTCATCGTATAATCACTCACCAATGCCTCCGCGTATTCACTCCCCATTTACTCCACCGCCTCTCTCTTCTTCCCTTGGAAATTACTTGCACTCTTCTCCCACTCCATCTCCCGTTTCTCCAAATAAGGTTCTTTTTTCTTCCATCCTACATAAATGTTATGAGATTCGTGTATTTTAATCTTCGAATTTATATTTTATTCATAGGTTTCAAGGAAATCGTACGAAAAGCTGAAGCAGGCATATGGATCATAG

mRNA sequence

ATGGCGTTACCGTTCGACACTGCTGCAACGTCGTTGCGAGATGATCTATTGAAGAGAGCTCGGAAACCTTACACCATCACCAAGTGCAGAGAGAGCTGGACTGAGCCTGAGCACGATAAGTTCCTCGAAGCTATTCAACTATTTGATCGTGACTGGAAGAAGATTGAGGCCTTTGTAGGGTCGAAGACCGTCATTCAGGAAGAGATATTGGATGAGACTGACGAATACGTTGCTGTTCATAACAAGCTGAAAGTGAATATGAGAGTAAGGAGATCAAAGTCAGAATCTCCAGGAGCAGCCCATCTGCGCTGGATATCACCAATGCCATCCCCACTGTCTTCATACCATCACTCTCCACTTTCTTCATCGTATAATCACTCACCAATGCCTCCGCGTATTCACTCCCCATTTACTCCACCGCCTCTCTCTTCTTCCCTTGGAAATTACTTGCACTCTTCTCCCACTCCATCTCCCGTTTCTCCAAATAAGGTTTCAAGGAAATCGTACGAAAAGCTGAAGCAGGCATATGGATCATAG

Coding sequence (CDS)

ATGGCGTTACCGTTCGACACTGCTGCAACGTCGTTGCGAGATGATCTATTGAAGAGAGCTCGGAAACCTTACACCATCACCAAGTGCAGAGAGAGCTGGACTGAGCCTGAGCACGATAAGTTCCTCGAAGCTATTCAACTATTTGATCGTGACTGGAAGAAGATTGAGGCCTTTGTAGGGTCGAAGACCGTCATTCAGGAAGAGATATTGGATGAGACTGACGAATACGTTGCTGTTCATAACAAGCTGAAAGTGAATATGAGAGTAAGGAGATCAAAGTCAGAATCTCCAGGAGCAGCCCATCTGCGCTGGATATCACCAATGCCATCCCCACTGTCTTCATACCATCACTCTCCACTTTCTTCATCGTATAATCACTCACCAATGCCTCCGCGTATTCACTCCCCATTTACTCCACCGCCTCTCTCTTCTTCCCTTGGAAATTACTTGCACTCTTCTCCCACTCCATCTCCCGTTTCTCCAAATAAGGTTTCAAGGAAATCGTACGAAAAGCTGAAGCAGGCATATGGATCATAG

Protein sequence

MALPFDTAATSLRDDLLKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSSYNHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS

Homology

[Close]

BLAST of Cp4.1LG14g06520 vs. ExPASy Swiss-Prot
Match: Q8H0W3 (Protein REVEILLE 6 OS=Arabidopsis thaliana OX=3702 GN=RVE6 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-21
Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 0


Query: 10  TSLRDDLLKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQ 67
           +S  +DL K+ RKPYTITK RESWTEPEHDKFLEA+QLFDRDWKKIEAF+GSKTVIQ
Sbjct: 52  SSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQ 108

[Close]

BLAST of Cp4.1LG14g06520 vs. ExPASy Swiss-Prot
Match: Q8RWU3 (Protein REVEILLE 8 OS=Arabidopsis thaliana OX=3702 GN=RVE8 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 6.4e-19
Identity = 45/63 (71.43%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 4  PFDTAATSLRDDLLKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKT 63
          P  T+  ++ +   K+ RKPYTITK RESWTE EHDKFLEA+QLFDRDWKKIE FVGSKT
Sbjct: 17 PPPTSTDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKT 76

Query: 64 VIQ 67
          VIQ
Sbjct: 77 VIQ 79

[Close]

BLAST of Cp4.1LG14g06520 vs. ExPASy Swiss-Prot
Match: Q6R0H0 (Protein REVEILLE 3 OS=Arabidopsis thaliana OX=3702 GN=RVE3 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.2e-18
Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 11 SLRDDLLKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQ 67
          S  +D  K+ RKPYTITK RE+WTE EHDKFLEA+ LFDRDWKKI+AFVGSKTVIQ
Sbjct: 42 SFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQ 97

[Close]

BLAST of Cp4.1LG14g06520 vs. ExPASy Swiss-Prot
Match: C0SVG5 (Protein REVEILLE 5 OS=Arabidopsis thaliana OX=3702 GN=RVE5 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 7  TAATSLRDDLLKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQ 66
          T+  S  +D   + RKPYTI K RE+WT+ EHDKFLEA+ LFDRDWKKIEAFVGSKTV+Q
Sbjct: 36 TSTVSFSEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQ 95

[Close]

BLAST of Cp4.1LG14g06520 vs. ExPASy Swiss-Prot
Match: Q6R0G4 (Protein REVEILLE 4 OS=Arabidopsis thaliana OX=3702 GN=RVE4 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.7e-17
Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 0


Query: 18 KRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQ 67
          K+ RK YTITK RESWTE EHDKFLEA+QLFDRDWKKIE FVGSKTVIQ
Sbjct: 36 KKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ 84

[Close]

BLAST of Cp4.1LG14g06520 vs. NCBI nr
Match: XP_023552290.1 (DUF21 domain-containing protein At5g52790-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224 bits (571), Expect = 1.65e-72
Identity = 112/114 (98.25%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 65  IQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSSY 124
           ++EEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSSY
Sbjct: 9   VKEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSSY 68

Query: 125 NHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS 178
           NHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS
Sbjct: 69  NHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS 122

[Close]

BLAST of Cp4.1LG14g06520 vs. NCBI nr
Match: XP_023552286.1 (DUF21 domain-containing protein At5g52790 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226 bits (575), Expect = 2.63e-68
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 64  VIQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS 123
           ++QEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS
Sbjct: 382 LLQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS 441

Query: 124 YNHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS 178
           YNHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS
Sbjct: 442 YNHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS 496

[Close]

BLAST of Cp4.1LG14g06520 vs. NCBI nr
Match: XP_022922836.1 (DUF21 domain-containing protein At5g52790 [Cucurbita moschata])

HSP 1 Score: 219 bits (558), Expect = 8.98e-66
Identity = 111/115 (96.52%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 64  VIQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS 123
           ++QEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS
Sbjct: 382 LLQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS 441

Query: 124 YNHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS 178
           YNHSPMPP IHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQA GS
Sbjct: 442 YNHSPMPPPIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQADGS 496

[Close]

BLAST of Cp4.1LG14g06520 vs. NCBI nr
Match: XP_022984670.1 (DUF21 domain-containing protein At5g52790 [Cucurbita maxima])

HSP 1 Score: 217 bits (552), Expect = 7.02e-65
Identity = 110/115 (95.65%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 64  VIQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS 123
           ++QEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS
Sbjct: 382 LLQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS 441

Query: 124 YNHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS 178
           YNHSPMPPRIHSPFTPPPLSSSLGNYL SSPTPSPVSP+KVSRKSYEKLKQA GS
Sbjct: 442 YNHSPMPPRIHSPFTPPPLSSSLGNYLRSSPTPSPVSPHKVSRKSYEKLKQADGS 496

[Close]

BLAST of Cp4.1LG14g06520 vs. NCBI nr
Match: KAG7014745.1 (DUF21 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214 bits (546), Expect = 5.61e-64
Identity = 111/116 (95.69%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 64  VIQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAA-HLRWISPMPSPLSSYHHSPLSS 123
           ++QEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAA HLRWISPMPSPLSSYHHSPLSS
Sbjct: 382 LLQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAAHLRWISPMPSPLSSYHHSPLSS 441

Query: 124 SYNHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS 178
           SYNHSPMPP IHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQA GS
Sbjct: 442 SYNHSPMPPPIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQADGS 497

[Close]

BLAST of Cp4.1LG14g06520 vs. ExPASy TrEMBL
Match: A0A6J1E580 (DUF21 domain-containing protein At5g52790 OS=Cucurbita moschata OX=3662 GN=LOC111430700 PE=4 SV=1)

HSP 1 Score: 219 bits (558), Expect = 4.35e-66
Identity = 111/115 (96.52%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 64  VIQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS 123
           ++QEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS
Sbjct: 382 LLQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS 441

Query: 124 YNHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS 178
           YNHSPMPP IHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQA GS
Sbjct: 442 YNHSPMPPPIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQADGS 496

[Close]

BLAST of Cp4.1LG14g06520 vs. ExPASy TrEMBL
Match: A0A6J1J984 (DUF21 domain-containing protein At5g52790 OS=Cucurbita maxima OX=3661 GN=LOC111482882 PE=4 SV=1)

HSP 1 Score: 217 bits (552), Expect = 3.40e-65
Identity = 110/115 (95.65%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 64  VIQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS 123
           ++QEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS
Sbjct: 382 LLQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS 441

Query: 124 YNHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSPNKVSRKSYEKLKQAYGS 178
           YNHSPMPPRIHSPFTPPPLSSSLGNYL SSPTPSPVSP+KVSRKSYEKLKQA GS
Sbjct: 442 YNHSPMPPRIHSPFTPPPLSSSLGNYLRSSPTPSPVSPHKVSRKSYEKLKQADGS 496

[Close]

BLAST of Cp4.1LG14g06520 vs. ExPASy TrEMBL
Match: A0A1S3AYG4 (DUF21 domain-containing protein At5g52790 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484133 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 1.19e-44
Identity = 89/122 (72.95%), Postives = 97/122 (79.51%), Query Frame = 0


Query: 64  VIQEEILDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSS 123
           ++QEEILDETDEYVAVHNKLKVNM+VRRS SESPG  HL+WISP+ SPLSSYHHSPLSSS
Sbjct: 378 LLQEEILDETDEYVAVHNKLKVNMKVRRSTSESPGGPHLQWISPVASPLSSYHHSPLSSS 437

Query: 124 YNHSPM-----PPRIHSPFTPPPLSSSLGNYLHSSPTPSPV-------SPNKVSRKSYEK 173
           YNHSP+     PP IHSPF PP LSSS  NY HSSPTP  V       S +K+SRKSYEK
Sbjct: 438 YNHSPILHSPIPPHIHSPFNPPSLSSSPRNYFHSSPTPCSVPSLSASPSSHKISRKSYEK 497

[Close]

BLAST of Cp4.1LG14g06520 vs. ExPASy TrEMBL
Match: A0A6J1CIK0 (DUF21 domain-containing protein At5g52790 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111011498 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 1.27e-44
Identity = 90/120 (75.00%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 64  VIQEEILDETDEYVAVHNKLKVNMR-VRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSS 123
           ++QEEILDETDEYVAVHNKLKVNM  +RRS S SPG  HLRWISP+ SPLSSYHHSPLSS
Sbjct: 346 LLQEEILDETDEYVAVHNKLKVNMSALRRSTSGSPGGPHLRWISPVASPLSSYHHSPLSS 405

Query: 124 SYNHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPV----SPNKVSRKSYEKLKQAYGS 178
           SYNHSP+PP I SPFTPPPLSSS GNYL SS   S      S +KVSRKSYEKL+Q  GS
Sbjct: 406 SYNHSPIPPHIQSPFTPPPLSSSPGNYLQSSTAASAADASPSSHKVSRKSYEKLRQPVGS 465

[Close]

BLAST of Cp4.1LG14g06520 vs. ExPASy TrEMBL
Match: A0A6J1CH99 (DUF21 domain-containing protein At5g52790 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011498 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 2.40e-44
Identity = 90/120 (75.00%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 64  VIQEEILDETDEYVAVHNKLKVNMR-VRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSS 123
           ++QEEILDETDEYVAVHNKLKVNM  +RRS S SPG  HLRWISP+ SPLSSYHHSPLSS
Sbjct: 383 LLQEEILDETDEYVAVHNKLKVNMSALRRSTSGSPGGPHLRWISPVASPLSSYHHSPLSS 442

Query: 124 SYNHSPMPPRIHSPFTPPPLSSSLGNYLHSSPTPSPV----SPNKVSRKSYEKLKQAYGS 178
           SYNHSP+PP I SPFTPPPLSSS GNYL SS   S      S +KVSRKSYEKL+Q  GS
Sbjct: 443 SYNHSPIPPHIQSPFTPPPLSSSPGNYLQSSTAASAADASPSSHKVSRKSYEKLRQPVGS 502

[Close]

BLAST of Cp4.1LG14g06520 vs. TAIR 10
Match: AT5G52660.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-22
Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = 0


Query: 10  TSLRDDLLKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQ 67
           +S  +DL K+ RKPYTITK RESWTEPEHDKFLEA+QLFDRDWKKIEAF+GSKTVIQ
Sbjct: 52  SSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQ 108

[Close]

BLAST of Cp4.1LG14g06520 vs. TAIR 10
Match: AT3G09600.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 4.6e-20
Identity = 45/63 (71.43%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 4  PFDTAATSLRDDLLKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKT 63
          P  T+  ++ +   K+ RKPYTITK RESWTE EHDKFLEA+QLFDRDWKKIE FVGSKT
Sbjct: 17 PPPTSTDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKT 76

Query: 64 VIQ 67
          VIQ
Sbjct: 77 VIQ 79

[Close]

BLAST of Cp4.1LG14g06520 vs. TAIR 10
Match: AT3G09600.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 4.6e-20
Identity = 45/63 (71.43%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 4  PFDTAATSLRDDLLKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKT 63
          P  T+  ++ +   K+ RKPYTITK RESWTE EHDKFLEA+QLFDRDWKKIE FVGSKT
Sbjct: 17 PPPTSTDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKT 76

Query: 64 VIQ 67
          VIQ
Sbjct: 77 VIQ 79

[Close]

BLAST of Cp4.1LG14g06520 vs. TAIR 10
Match: AT1G01520.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-19
Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 11 SLRDDLLKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQ 67
          S  +D  K+ RKPYTITK RE+WTE EHDKFLEA+ LFDRDWKKI+AFVGSKTVIQ
Sbjct: 42 SFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQ 97

[Close]

BLAST of Cp4.1LG14g06520 vs. TAIR 10
Match: AT5G52660.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-19
Identity = 71/171 (41.52%), Postives = 90/171 (52.63%), Query Frame = 0


Query: 10  TSLRDDLLKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKTVIQEEI 69
           +S  +DL K+ RKPYTITK RESWTEPEHDKFLEA+QLFDRDWKKIEAF+GSKTVIQ  I
Sbjct: 52  SSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQ--I 111

Query: 70  LDETDEYVAVHNKLKVNMRVRRSKSESPGAAHLRWISPMPSPLSSYHHSPLSSSYNHSPM 129
                +Y     K      +   + +   AAH     P P          +  S+  +  
Sbjct: 112 RSHAQKYFLKVQKSGTGEHLPPPRPKRK-AAH-----PYPQKAHKNVQLQVPGSFKSTSE 171

Query: 130 PPRIHSPFTPPPLSSSLGNYLHSSPTPSPVSP--NKVSRKSYEKLKQAYGS 179
           P      F P   SSS+   L +SPT +  +P  N     S+  L +  G+
Sbjct: 172 PNDPSFMFRPE--SSSM---LMTSPTTAAAAPWTNNAQTISFTPLPKGAGA 209

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g06520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0W3	3.1e-21	82.46	Protein REVEILLE 6 OS=Arabidopsis thaliana OX=3702 GN=RVE6 PE=2 SV=1	[more]
Q8RWU3	6.4e-19	71.43	Protein REVEILLE 8 OS=Arabidopsis thaliana OX=3702 GN=RVE8 PE=2 SV=1	[more]
Q6R0H0	3.2e-18	76.79	Protein REVEILLE 3 OS=Arabidopsis thaliana OX=3702 GN=RVE3 PE=2 SV=1	[more]
C0SVG5	1.2e-17	68.33	Protein REVEILLE 5 OS=Arabidopsis thaliana OX=3702 GN=RVE5 PE=2 SV=1	[more]
Q6R0G4	2.7e-17	85.71	Protein REVEILLE 4 OS=Arabidopsis thaliana OX=3702 GN=RVE4 PE=1 SV=1	[more]

BLAST of Cp4.1LG14g06520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552290.1	1.65e-72	98.25	DUF21 domain-containing protein At5g52790-like [Cucurbita pepo subsp. pepo]	[more]
XP_023552286.1	2.63e-68	98.26	DUF21 domain-containing protein At5g52790 [Cucurbita pepo subsp. pepo]	[more]
XP_022922836.1	8.98e-66	96.52	DUF21 domain-containing protein At5g52790 [Cucurbita moschata]	[more]
XP_022984670.1	7.02e-65	95.65	DUF21 domain-containing protein At5g52790 [Cucurbita maxima]	[more]
KAG7014745.1	5.61e-64	95.69	DUF21 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of Cp4.1LG14g06520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E580	4.35e-66	96.52	DUF21 domain-containing protein At5g52790 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1J984	3.40e-65	95.65	DUF21 domain-containing protein At5g52790 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S3AYG4	1.19e-44	72.95	DUF21 domain-containing protein At5g52790 isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1CIK0	1.27e-44	75.00	DUF21 domain-containing protein At5g52790 isoform X4 OS=Momordica charantia OX=3...	[more]
A0A6J1CH99	2.40e-44	75.00	DUF21 domain-containing protein At5g52790 isoform X3 OS=Momordica charantia OX=3...	[more]

BLAST of Cp4.1LG14g06520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52660.2	2.2e-22	82.46	Homeodomain-like superfamily protein	[more]
AT3G09600.1	4.6e-20	71.43	Homeodomain-like superfamily protein	[more]
AT3G09600.2	4.6e-20	71.43	Homeodomain-like superfamily protein	[more]
AT1G01520.1	2.3e-19	76.79	Homeodomain-like superfamily protein	[more]
AT5G52660.1	2.3e-19	41.52	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 33..67 e-value: 2.1E-9 score: 39.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..129
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 8..66
None	No IPR available	PANTHER	PTHR12802:SF103	PROTEIN REVEILLE 6	coord: 8..66
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 28..65 e-value: 2.9E-9 score: 35.1
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 30..64 e-value: 2.4E-6 score: 27.6
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 31..64 score: 9.45477
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 32..66 e-value: 4.3971E-5 score: 37.555
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 15..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g06520.1	Cp4.1LG14g06520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010960	magnesium ion homeostasis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding