Cp4.1LG14g05950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g05950
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	LOB domain-containing protein
Location	Cp4.1LG14: 687641 .. 688808 (-)
RNA-Seq Expression	Cp4.1LG14g05950
Synteny	Cp4.1LG14g05950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTAGCATGATCTCTGGTCGTTGTGCAGCTTGTAAGTATTTGAGAAGAAGATGTCCTTCCGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCGCCATTGTTCATCGAATCTATGGTGCCAGCAATGTCGCCAAATTCCTCCATGTAATTTCTTCTTCCTTTTTTTATGAACTATTATGAGTTTCTGGTATTTAATTTAATTTGATATCATTTTACTTGATAATCAGCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGGTTCTCTCAGATTGGGCTTTCCACTCCAGCCCATTGGTTTAATTCATAGCACGTTGTAAACATGACAAAACTCCTTTCACTTCTTTTAAATCTTTTTTAGAATGAAAATGATAACATAGCTTCCAATTTTTTAAATCCTTGCTCCTCTTTCTTCATTTTGGTGCACGTCCCATTTACATCTCACTTTTCTCCGCTTAATAAACTTAAAAAATTCGTTTATAAGGAGGTGGAAACTTCTCTCTAATAGATACGAGAGGAATGAAAAATATGTTAATTGGAAGAATTTAGTCGGCAGTATAGTGTGGNTTCTTCTTCCTTTTTTTATGAACTATTATGAGTTTCTGGTATTTAATTTAATTTGATATCATTTTACTTGATAATCAGCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGGTTCTCTCAGATTGGGCTTTCCACTCCAGCCCATTGGTTTAATTCATAGCACGTTG

mRNA sequence

ATTCTAGCATGATCTCTGGTCGTTGTGCAGCTTGTAAGTATTTGAGAAGAAGATGTCCTTCCGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCGCCATTGTTCATCGAATCTATGGTGCCAGCAATGTCGCCAAATTCCTCCATCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGGTTCTCTCAGATTGGGCTTTCCACTCCAGCCCATTGGTTTAATTCATAGCACGTTG

Coding sequence (CDS)

ATGATCTCTGGTCGTTGTGCAGCTTGTAAGTATTTGAGAAGAAGATGTCCTTCCGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCGCCATTGTTCATCGAATCTATGGTGCCAGCAATGTCGCCAAATTCCTCCATCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGCAACTCCCTCTGCATCTACGACCCGAAGCAGCCGAAACTTTGTTCTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCATTTCTCGCTTCCAACCTCCAAGAAGCCCAACCACAAGATTTTGCAGTTCAGCCCATTCAAGGCCCAAATACTATTGGGTTCTCTCAGATTGGGCTTTCCACTCCAGCCCATTGGTTTAATTCATAGCACGTTG

Protein sequence

MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDFAVQPIQGPNTIGNSLCIYDPKQPKLCSLRQNAELKIQFMDVLELFLNYNINYTWQKPSWPKLGLRLHFSLPTSKKPNHKILQFSPFKAQILLGSLRLGFPLQPIGLIHSTL

Homology

[Close]

BLAST of Cp4.1LG14g05950 vs. ExPASy Swiss-Prot
Match: P59468 (LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.5e-39
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + L + Q  DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDF 120

[Close]

BLAST of Cp4.1LG14g05950 vs. ExPASy Swiss-Prot
Match: P59467 (LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.7e-38
Identity = 73/116 (62.93%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + L +    DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDF 120

[Close]

BLAST of Cp4.1LG14g05950 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.3e-31
Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAETL 65
           CAACK LRRRC  DC+FSP+FP++ PQ+FA VHR++GASNV K L +LP+H R +A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFL 109
            +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+  L
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]

BLAST of Cp4.1LG14g05950 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 2.1e-30
Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAA 62
           S  CA+CK LRRRC  DCIF+P+FP ++P +FAIVH+++GASNV+K L +LP+H R +A 
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI 106
            +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +AEI
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

[Close]

BLAST of Cp4.1LG14g05950 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28
Identity = 54/104 (51.92%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAA 62
           S  CAACK+LRR+C  +C+F+P+FP + PQ+FA VH+++GASNVAK L++L  + R +A 
Sbjct: 5   SSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAV 64

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA 107
            +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   + E+A
Sbjct: 65  NSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

[Close]

BLAST of Cp4.1LG14g05950 vs. NCBI nr
Match: XP_023522202.1 (LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274 bits (700), Expect = 6.63e-91
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120
           AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120

Query: 121 AVQPIQGPNTIGNS 134
           AVQPIQGPNTIG S
Sbjct: 121 AVQPIQGPNTIGFS 134

[Close]

BLAST of Cp4.1LG14g05950 vs. NCBI nr
Match: XP_022923144.1 (LOB domain-containing protein 24-like [Cucurbita moschata])

HSP 1 Score: 266 bits (679), Expect = 1.04e-87
Identity = 129/134 (96.27%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRC SDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE
Sbjct: 1   MISGRCAACKYLRRRCASDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120
           AAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQP DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPHDF 120

Query: 121 AVQPIQGPNTIGNS 134
           A QPIQGPNTIG S
Sbjct: 121 AAQPIQGPNTIGFS 134

[Close]

BLAST of Cp4.1LG14g05950 vs. NCBI nr
Match: KAG7014789.1 (LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265 bits (678), Expect = 1.48e-87
Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLP+HLRPE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120
           AAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQ  DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQLHDF 120

Query: 121 AVQPIQGPNTIGNS 134
           AVQPIQGPNTIG S
Sbjct: 121 AVQPIQGPNTIGFS 134

[Close]

BLAST of Cp4.1LG14g05950 vs. NCBI nr
Match: XP_022985104.1 (LOB domain-containing protein 24-like [Cucurbita maxima])

HSP 1 Score: 264 bits (674), Expect = 6.21e-87
Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLP+HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNL-QEAQPQD 120
           AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNL QEAQPQD
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEAQPQD 120

Query: 121 FAVQPIQGPNTIGNS 134
           FAV+PIQGPNTIG S
Sbjct: 121 FAVEPIQGPNTIGFS 135

[Close]

BLAST of Cp4.1LG14g05950 vs. NCBI nr
Match: XP_008439169.1 (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo])

HSP 1 Score: 248 bits (634), Expect = 8.66e-81
Identity = 122/136 (89.71%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQ-- 120
           AAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA +ASN+QE QPQ  
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 DFAVQPIQGPNTIGNS 134
           DFA QPIQGPN++G S
Sbjct: 121 DFAFQPIQGPNSVGFS 136

[Close]

BLAST of Cp4.1LG14g05950 vs. ExPASy TrEMBL
Match: A0A6J1E5I6 (LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430896 PE=3 SV=1)

HSP 1 Score: 266 bits (679), Expect = 5.04e-88
Identity = 129/134 (96.27%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRC SDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE
Sbjct: 1   MISGRCAACKYLRRRCASDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120
           AAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQP DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPHDF 120

Query: 121 AVQPIQGPNTIGNS 134
           A QPIQGPNTIG S
Sbjct: 121 AAQPIQGPNTIGFS 134

[Close]

BLAST of Cp4.1LG14g05950 vs. ExPASy TrEMBL
Match: A0A6J1JCD0 (LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC111483182 PE=3 SV=1)

HSP 1 Score: 264 bits (674), Expect = 3.01e-87
Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLP+HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNL-QEAQPQD 120
           AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNL QEAQPQD
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEAQPQD 120

Query: 121 FAVQPIQGPNTIGNS 134
           FAV+PIQGPNTIG S
Sbjct: 121 FAVEPIQGPNTIGFS 135

[Close]

BLAST of Cp4.1LG14g05950 vs. ExPASy TrEMBL
Match: A0A1S3AY36 (LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE=3 SV=1)

HSP 1 Score: 248 bits (634), Expect = 4.19e-81
Identity = 122/136 (89.71%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQ-- 120
           AAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA +ASN+QE QPQ  
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 DFAVQPIQGPNTIGNS 134
           DFA QPIQGPN++G S
Sbjct: 121 DFAFQPIQGPNSVGFS 136

[Close]

BLAST of Cp4.1LG14g05950 vs. ExPASy TrEMBL
Match: A0A0A0L9N7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV=1)

HSP 1 Score: 247 bits (630), Expect = 1.82e-80
Identity = 120/135 (88.89%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEA-QPQD 120
           AAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAKTRAEIA +ASN+QE  QPQD
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 121 FAVQPIQGPNTIGNS 134
           FA +PIQGPN++G S
Sbjct: 121 FAFEPIQGPNSVGFS 135

[Close]

BLAST of Cp4.1LG14g05950 vs. ExPASy TrEMBL
Match: A0A0A0LLX6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV=1)

HSP 1 Score: 213 bits (543), Expect = 2.40e-67
Identity = 106/135 (78.52%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ LR E
Sbjct: 1   MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGE 60

Query: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA LASN Q+AQ +DF
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQHEDF 120

Query: 121 AVQ-PIQGPNTIGNS 134
               P  GP   G S
Sbjct: 121 PFDDPSSGPIFTGLS 135

[Close]

BLAST of Cp4.1LG14g05950 vs. TAIR 10
Match: AT3G26660.1 (LOB domain-containing protein 24 )

HSP 1 Score: 162.5 bits (410), Expect = 3.9e-40
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + L + Q  DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDF 120

[Close]

BLAST of Cp4.1LG14g05950 vs. TAIR 10
Match: AT3G26620.1 (LOB domain-containing protein 23 )

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39
Identity = 73/116 (62.93%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 121
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + L +    DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDF 120

[Close]

BLAST of Cp4.1LG14g05950 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 136.7 bits (343), Expect = 2.3e-32
Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAAETL 65
           CAACK LRRRC  DC+FSP+FP++ PQ+FA VHR++GASNV K L +LP+H R +A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFL 109
            +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+  L
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]

BLAST of Cp4.1LG14g05950 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-31
Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAA 62
           S  CA+CK LRRRC  DCIF+P+FP ++P +FAIVH+++GASNV+K L +LP+H R +A 
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI 106
            +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +AEI
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

[Close]

BLAST of Cp4.1LG14g05950 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 )

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 54/104 (51.92%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPEAA 62
           S  CAACK+LRR+C  +C+F+P+FP + PQ+FA VH+++GASNVAK L++L  + R +A 
Sbjct: 5   SSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAV 64

Query: 63  ETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA 107
            +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   + E+A
Sbjct: 65  NSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g05950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59468	5.5e-39	63.79	LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 S...	[more]
P59467	2.7e-38	62.93	LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 S...	[more]
Q9SHE9	3.3e-31	57.28	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8LBW3	2.1e-30	57.28	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9FKZ3	1.5e-28	51.92	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]

BLAST of Cp4.1LG14g05950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522202.1	6.63e-91	99.25	LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923144.1	1.04e-87	96.27	LOB domain-containing protein 24-like [Cucurbita moschata]	[more]
KAG7014789.1	1.48e-87	96.27	LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022985104.1	6.21e-87	96.30	LOB domain-containing protein 24-like [Cucurbita maxima]	[more]
XP_008439169.1	8.66e-81	89.71	PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]	[more]

BLAST of Cp4.1LG14g05950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5I6	5.04e-88	96.27	LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430...	[more]
A0A6J1JCD0	3.01e-87	96.30	LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC11148318...	[more]
A0A1S3AY36	4.19e-81	89.71	LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE...	[more]
A0A0A0L9N7	1.82e-80	88.89	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV...	[more]
A0A0A0LLX6	2.40e-67	78.52	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV...	[more]

BLAST of Cp4.1LG14g05950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26660.1	3.9e-40	63.79	LOB domain-containing protein 24	[more]
AT3G26620.1	2.0e-39	62.93	LOB domain-containing protein 23	[more]
AT1G31320.1	2.3e-32	57.28	LOB domain-containing protein 4	[more]
AT2G30130.1	1.5e-31	57.28	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G66870.1	1.1e-29	51.92	ASYMMETRIC LEAVES 2-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..104
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..118
None	No IPR available	PANTHER	PTHR31301:SF120	LOB DOMAIN-CONTAINING PROTEIN 23-RELATED	coord: 1..118
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 5..102 e-value: 1.1E-37 score: 128.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 4..105 score: 24.169519

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g05950.1	Cp4.1LG14g05950.1	mRNA