Cp4.1LG14g05200 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g05200
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Protein of unknown function (DUF1218)
Location	Cp4.1LG14: 1113909 .. 1116204 (+)
RNA-Seq Expression	Cp4.1LG14g05200
Synteny	Cp4.1LG14g05200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCCATTGTCCAATCCCATCGGATACGGCGTAGCCATCAAGGGCAATACGGCGTCGTTTACTCCAACCGCCATATCCTCCCCTAATGGAATCCAAATTTCGTAGGAACTTCCTCTTCTTCAGTCATCGGACGAAACGTCACATTTCAGCGCCTGTCAATTTCTCTCTCAATATCTTCTTCTACCGTCTCCGCCACAGGTTCTTCGTAGCGAAATCTCGGCCTTAATCCGAAACTCCACCGAAACACGCAGGTTATTTCTCCCAGTAACTTGCCGGAAACTTTCGGCGGCGGCAGAGATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTATTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGTGAGATGCCTTTTCTTAACAATCACGTATTGATTTAGTAATTTTTCTTCGGTGAATTATCTGTTTGGTTGATGAGAAAATCCGTCAGAAAGAATGTGAAAGGATAGCGAGAGGAGATTCATTTTGGATAGCGATTTATAAAAAGAAGTTGTTCGTGAATGGATCTGTTGTTTTTGGCTGCTTCCTTTAAGCTGTATTTGTTTCCAAGCCCTACTGAATTGATCATCTTCTTTGTTTTTGAGTTTGAGGCCATAAACTTCCAATTATATGCAAGCGATTCGAGTAATAGTTAGAGAATTGATAATAATTTTGTTTGTGATTTTCTATTTTTAGAAGTTAAGCAAATTGAGTGACAGTTTCTTCACTTTAATTTTGGTTCATAATTAGAATTTGGTTTGGTTTAAAAAAATTACATAATTTCCAATTTGTCCCTGAAATTTAAATTTCCTCGAGTTTTAATTTTGAGAGATGCTCGTTATGGTCTTGAATTGTTTGAAGTTACTAGTTCAGGACATAGTTCTTTGGAATTTTGTGTGGGATCGTAGCCTGATAAGTCTGGTCATTTTTTCATTTGACAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAAAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACGAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTTGTTTCATGGTACTTTTCAACCCTTCCTTTCTCATTCTAGCTTGCATTTAGTTCATGTCTTGATGCTTGCTGCTTGCTGCTTGCTGCTATAATATGAGATGAATTATATGAATGTCGATATCGAAACCTGTTTTCGCAAGATTGCAGGGTCGAATTGCAGGGTTATTCGAATTCTACTCGGGTTCTTGATGGCTGACTGTTATGATATTGTTTGTGATTATATGATCTTATTTCTGCTTTGAAACAATTCCATGTTTTTGTTGTCATCTTTTTGGGCTCTTCTGCATTGTTAATTCATCATGAAAGTTGTGTTAGACTTCTTAATCCATGATCATTACAGTTGAAATGTTAGACTTCTTAATCCCTTTGGTCGAATTATTCCACGAATAAAAGAAAGATCGATTCCCTGTGTTCGTCGGATAAATCAAGTTTGAGCCATGGCTTTTTTTCTGCAGGTTTACATTTGTGATAGCGTTTCTGCTGTTGCTAACCGGTGCTGCACTGAACGGTGGAAGGAATGAACAAAGCAGCTATTTCGATTACTACTATTGCTATGTTCTGAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATTGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTCGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGATCGGTAAGCTTCGGTTGATATCAAATGTGTTTTAGAAAACCATACAAGTTATACAACTTGATTGATGTTGTCTTTATAGGAAGTAGCTGTTGTGGACTTGTATAGAAGAACTGAATTGAATTTTTACTTCCCTTTGATCCATGGGAAATAAATAAACTGTAATTGAACAATAAGTTGATTGAAAATATTTTGATATTTGTTTATAGTAAAATACATTTTTATCTGTTTTATGTGAGACAAAAATGCTATACCCTACCCTACCATTTAAATTGCTTGTAAATATTATGATTGGAGGATAATAAATACAAAAAATTAATATTAAGT

mRNA sequence

TATCCATTGTCCAATCCCATCGGATACGGCGTAGCCATCAAGGGCAATACGGCGTCGTTTACTCCAACCGCCATATCCTCCCCTAATGGAATCCAAATTTCGTAGGAACTTCCTCTTCTTCAGTCATCGGACGAAACGTCACATTTCAGCGCCTGTCAATTTCTCTCTCAATATCTTCTTCTACCGTCTCCGCCACAGGTTCTTCGTAGCGAAATCTCGGCCTTAATCCGAAACTCCACCGAAACACGCAGGTTATTTCTCCCAGTAACTTGCCGGAAACTTTCGGCGGCGGCAGAGATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTATTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAAAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACGAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTTGTTTCATGGTTTACATTTGTGATAGCGTTTCTGCTGTTGCTAACCGGTGCTGCACTGAACGGTGGAAGGAATGAACAAAGCAGCTATTTCGATTACTACTATTGCTATGTTCTGAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATTGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTCGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGATCGGAAGTAGCTGTTGTGGACTTGTATAGAAGAACTGAATTGAATTTTTACTTCCCTTTGATCCATGGGAAATAAATAAACTGTAATTGAACAATAAGTTGATTGAAAATATTTTGATATTTGTTTATAGTAAAATACATTTTTATCTGTTTTATGTGAGACAAAAATGCTATACCCTACCCTACCATTTAAATTGCTTGTAAATATTATGATTGGAGGATAATAAATACAAAAAATTAATATTAAGT

Coding sequence (CDS)

ATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTATTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAAAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACGAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTTGTTTCATGGTTTACATTTGTGATAGCGTTTCTGCTGTTGCTAACCGGTGCTGCACTGAACGGTGGAAGGAATGAACAAAGCAGCTATTTCGATTACTACTATTGCTATGTTCTGAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATTGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTCGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGA

Protein sequence

MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAALSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGRNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT

Homology

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BLAST of Cp4.1LG14g05200 vs. NCBI nr
Match: XP_023551924.1 (uncharacterized protein LOC111809750 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427 bits (1098), Expect = 9.35e-151
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216
           NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT
Sbjct: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216

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BLAST of Cp4.1LG14g05200 vs. NCBI nr
Match: XP_022922463.1 (uncharacterized protein LOC111430466 [Cucurbita moschata])

HSP 1 Score: 423 bits (1087), Expect = 4.45e-149
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVA LGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALN GR
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216
           NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT
Sbjct: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216

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BLAST of Cp4.1LG14g05200 vs. NCBI nr
Match: KAG7014863.1 (hypothetical protein SDJN02_22493 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 421 bits (1082), Expect = 2.57e-148
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVA LGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALN GR
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYF+YYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 121 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216
           NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT
Sbjct: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216

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BLAST of Cp4.1LG14g05200 vs. NCBI nr
Match: KAG6576843.1 (Protein MODIFYING WALL LIGNIN-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421 bits (1082), Expect = 4.86e-147
Identity = 213/216 (98.61%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVA LGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 83  MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 142

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALN GR
Sbjct: 143 SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 202

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYF+YYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 203 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 262

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216
           NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT
Sbjct: 263 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 298

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BLAST of Cp4.1LG14g05200 vs. NCBI nr
Match: XP_022140830.1 (uncharacterized protein LOC111011403 [Momordica charantia])

HSP 1 Score: 346 bits (888), Expect = 9.49e-119
Identity = 170/216 (78.70%), Postives = 188/216 (87.04%), Query Frame = 0


Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKA+AVCSVVA LGLL+VATGFAAEGTR+K +QV+QVTP  C YP+SPA  LGL AAL
Sbjct: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           SLL+AQ+ INVSTGCICC RGPRPPASKWRT VVCFV+SWFTF+IAFLLLLTGAALN  R
Sbjct: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E+S YF YY CYVLKPGVFAVAT++  AS+ LGLFYYLILNSAKN+P VWGNPS+PP A
Sbjct: 121 GEESYYFGYYECYVLKPGVFAVATILATASIVLGLFYYLILNSAKNNPTVWGNPSVPPQA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216
           NIAM QPQFPPPPP Q  + DPVFVHEDTY RRQ+T
Sbjct: 181 NIAMGQPQFPPPPPPQQRSGDPVFVHEDTYMRRQYT 216

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BLAST of Cp4.1LG14g05200 vs. ExPASy TrEMBL
Match: A0A6J1E6P1 (uncharacterized protein LOC111430466 OS=Cucurbita moschata OX=3662 GN=LOC111430466 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 2.15e-149
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVA LGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALN GR
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216
           NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT
Sbjct: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216

[Close]

BLAST of Cp4.1LG14g05200 vs. ExPASy TrEMBL
Match: A0A6J1CG96 (uncharacterized protein LOC111011403 OS=Momordica charantia OX=3673 GN=LOC111011403 PE=4 SV=1)

HSP 1 Score: 346 bits (888), Expect = 4.60e-119
Identity = 170/216 (78.70%), Postives = 188/216 (87.04%), Query Frame = 0


Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKA+AVCSVVA LGLL+VATGFAAEGTR+K +QV+QVTP  C YP+SPA  LGL AAL
Sbjct: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120
           SLL+AQ+ INVSTGCICC RGPRPPASKWRT VVCFV+SWFTF+IAFLLLLTGAALN  R
Sbjct: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E+S YF YY CYVLKPGVFAVAT++  AS+ LGLFYYLILNSAKN+P VWGNPS+PP A
Sbjct: 121 GEESYYFGYYECYVLKPGVFAVATILATASIVLGLFYYLILNSAKNNPTVWGNPSVPPQA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216
           NIAM QPQFPPPPP Q  + DPVFVHEDTY RRQ+T
Sbjct: 181 NIAMGQPQFPPPPPPQQRSGDPVFVHEDTYMRRQYT 216

[Close]

BLAST of Cp4.1LG14g05200 vs. ExPASy TrEMBL
Match: A0A0A0KU80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025740 PE=4 SV=1)

HSP 1 Score: 312 bits (800), Expect = 1.24e-105
Identity = 160/218 (73.39%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 1   MERK-ALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERK AL V  VVAILG++++ATGFAAE TR K NQV +V P +CKYP+SPA  LGLTAA
Sbjct: 1   MERKSALMVKYVVAILGIVMIATGFAAEATRTKRNQVTKVAPDLCKYPRSPALGLGLTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGG 120
           LSLL AQI I  STGC+CC RGPRPPASKWRTAV+CF +SW T+VIAFLL LTGAALN G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPPASKWRTAVICFTISWVTYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R EQ +YF  Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RGEQRNYFRDYDCYVLKPGVFSFATIVGMASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216
             NIAMAQPQFP PPP    TADPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNPPPPPQRTADPVFVHEDTYMRRQFT 218

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BLAST of Cp4.1LG14g05200 vs. ExPASy TrEMBL
Match: A0A5D3D069 (DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00200 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 5.31e-100
Identity = 155/220 (70.45%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 1   MERKA-LAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERKA L V  VVA LG++++ATGFAAE TR KG QV +V P +CKYP+SPA  LG TAA
Sbjct: 1   MERKAALVVKFVVAFLGIVMIATGFAAEATRTKGKQVTRVAPDVCKYPRSPAMGLGFTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGG 120
           LSLL AQI I  STGC+CC RGPRPP  KWRTAV+CF VSW T+VIAFLL LTGAALN G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPP--KWRTAVICFTVSWITYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R++Q +Y   Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RDQQRNYLGNYECYVLKPGVFSFATIVGVASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQFP--PPPPAQPTTADPVFVHEDTYTRRQFT 216
             NIAMAQPQFP  PPPP    T DPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNPPPPPPPQRTTDPVFVHEDTYMRRQFT 218

[Close]

BLAST of Cp4.1LG14g05200 vs. ExPASy TrEMBL
Match: A0A1S3BX72 (uncharacterized protein LOC103494435 OS=Cucumis melo OX=3656 GN=LOC103494435 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 5.31e-100
Identity = 155/220 (70.45%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 1   MERKA-LAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERKA L V  VVA LG++++ATGFAAE TR KG QV +V P +CKYP+SPA  LG TAA
Sbjct: 1   MERKAALVVKFVVAFLGIVMIATGFAAEATRTKGKQVTRVAPDVCKYPRSPAMGLGFTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGG 120
           LSLL AQI I  STGC+CC RGPRPP  KWRTAV+CF VSW T+VIAFLL LTGAALN G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPP--KWRTAVICFTVSWITYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R++Q +Y   Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RDQQRNYLGNYECYVLKPGVFSFATIVGVASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQFP--PPPPAQPTTADPVFVHEDTYTRRQFT 216
             NIAMAQPQFP  PPPP    T DPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNPPPPPPPQRTTDPVFVHEDTYMRRQFT 218

[Close]

BLAST of Cp4.1LG14g05200 vs. TAIR 10
Match: AT5G17210.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 201.1 bits (510), Expect = 9.3e-52
Identity = 109/219 (49.77%), Postives = 141/219 (64.38%), Query Frame = 0


Query: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQV---VQVTPTMCKYPQSPAAALGLT 60
           MER+ + +C V+ +LGLL   T F AE TR+K +QV   V  + T C YP+SPA  LG T
Sbjct: 1   MERRKIVMCGVLFLLGLLSAVTAFVAEATRIKRSQVTVTVSDSITKCTYPRSPAFNLGFT 60

Query: 61  AALSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALN 120
           +AL L++AQI+++VS+GC CC +GP P  S W  +++CFVVSWFTFVIAFL+LL+GAALN
Sbjct: 61  SALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALN 120

Query: 121 GGRNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIP 180
               E+S     Y+CY++KPGVF+   V+   ++ALG+ YYL L S K         +  
Sbjct: 121 DEHTEESMNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLCLTSNKQIVAA----TTT 180

Query: 181 PPANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
               IAM QPQ P          DPVFVHEDTY RRQFT
Sbjct: 181 QGTGIAMGQPQIP------ERVEDPVFVHEDTYMRRQFT 209

[Close]

BLAST of Cp4.1LG14g05200 vs. TAIR 10
Match: AT5G17210.2 (Protein of unknown function (DUF1218) )

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-43
Identity = 90/175 (51.43%), Postives = 114/175 (65.14%), Query Frame = 0


Query: 42  TMCKYPQSPAAALGLTAALSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWF 101
           T C YP+SPA  LG T+AL L++AQI+++VS+GC CC +GP P  S W  +++CFVVSWF
Sbjct: 11  TKCTYPRSPAFNLGFTSALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWF 70

Query: 102 TFVIAFLLLLTGAALNGGRNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLIL 161
           TFVIAFL+LL+GAALN    E+S     Y+CY++KPGVF+   V+   ++ALG+ YYL L
Sbjct: 71  TFVIAFLVLLSGAALNDEHTEESMNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLCL 130

Query: 162 NSAKNDPNVWGNPSIPPPANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
            S K         +      IAM QPQ P          DPVFVHEDTY RRQFT
Sbjct: 131 TSNKQIVAA----TTTQGTGIAMGQPQIP------ERVEDPVFVHEDTYMRRQFT 175

[Close]

BLAST of Cp4.1LG14g05200 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-11
Identity = 48/161 (29.81%), Postives = 76/161 (47.20%), Query Frame = 0


Query: 12  VAILGLLLVATGF--AAEGTRVKGNQVVQ--VTPTMCKYPQSPAAALGLTAALSLLLAQI 71
           + ++ L LVA GF  AAE  R  G  +       T C Y    A   G+ A L LL ++ 
Sbjct: 12  ILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLSSES 71

Query: 72  LINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGRNEQSSYF 131
           L+   T C+C  R P  P S    +++ F+ SW TF++A   ++ GA  N    +  S  
Sbjct: 72  LLMSVTKCMCFGR-PLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKYLS-S 131

Query: 132 DYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDP 169
             + C  L+ G+F    V   A++ L ++YY+    + + P
Sbjct: 132 QTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSP 170

[Close]

BLAST of Cp4.1LG14g05200 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09
Identity = 41/126 (32.54%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 44  CKYPQSPAAALGLTAALSLLLAQILINVSTGCICCTRGPRPPASK-WRTAVVCFVVSWFT 103
           C Y +  A  LG+ + L LL +Q+LI V++ C+CC R   P  S+ W  A+  F+ +W  
Sbjct: 43  CVYDKDIATGLGVGSFLVLLASQLLIMVASRCLCCGRALTPSGSRSW--AIFLFITTWVF 102

Query: 104 FVIAFLLLLTGAALNGGRNEQSSYFDYY--YCYVLKPGVFAVATVVGAASLALGLFYYLI 163
           F IA + LL G+  N    +   YF      C  L+ GVF         +  +   YY+ 
Sbjct: 103 FFIAQVCLLAGSVRNAYHTKYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVT 162

Query: 164 LNSAKN 167
           L+ AK+
Sbjct: 163 LSRAKD 166

[Close]

BLAST of Cp4.1LG14g05200 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-09
Identity = 48/161 (29.81%), Postives = 71/161 (44.10%), Query Frame = 0


Query: 8   VCSVVAILGLLLVATGFAAEGTRVKGN--QVVQVTPTMCKYPQSPAAALGLTAALSLLLA 67
           V ++V +  L+      AAE  R      Q  +V    C Y    A   G+ A L  + +
Sbjct: 6   VSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVAS 65

Query: 68  QILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGRNEQSS 127
           QILI + + C CC + P  P      A++ F+VSW  F+IA + LL G+  N    +  +
Sbjct: 66  QILIMLVSRCFCCGK-PLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKYRT 125

Query: 128 YF--DYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSA 165
            F  +   C  L+ GVFA        +  +  FYY    SA
Sbjct: 126 MFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSA 165

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g05200 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG14g05200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551924.1	9.35e-151	100.00	uncharacterized protein LOC111809750 [Cucurbita pepo subsp. pepo]	[more]
XP_022922463.1	4.45e-149	99.07	uncharacterized protein LOC111430466 [Cucurbita moschata]	[more]
KAG7014863.1	2.57e-148	98.61	hypothetical protein SDJN02_22493 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6576843.1	4.86e-147	98.61	Protein MODIFYING WALL LIGNIN-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022140830.1	9.49e-119	78.70	uncharacterized protein LOC111011403 [Momordica charantia]	[more]

BLAST of Cp4.1LG14g05200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6P1	2.15e-149	99.07	uncharacterized protein LOC111430466 OS=Cucurbita moschata OX=3662 GN=LOC1114304...	[more]
A0A6J1CG96	4.60e-119	78.70	uncharacterized protein LOC111011403 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A0A0KU80	1.24e-105	73.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025740 PE=4 SV=1	[more]
A0A5D3D069	5.31e-100	70.45	DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BX72	5.31e-100	70.45	uncharacterized protein LOC103494435 OS=Cucumis melo OX=3656 GN=LOC103494435 PE=...	[more]

BLAST of Cp4.1LG14g05200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17210.1	9.3e-52	49.77	Protein of unknown function (DUF1218)	[more]
AT5G17210.2	2.1e-43	51.43	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	2.7e-11	29.81	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	1.2e-09	32.54	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	2.6e-09	29.81	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 58..150 e-value: 3.2E-26 score: 91.6
None	No IPR available	PANTHER	PTHR31769:SF59	PROTEIN, PUTATIVE (DUF1218)-RELATED	coord: 1..197
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g05200.1	Cp4.1LG14g05200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane