Cp4.1LG14g04950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG14g04950
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionProline-rich receptor-like protein kinase PERK2
LocationCp4.1LG14: 1314391 .. 1314756 (+)
RNA-Seq ExpressionCp4.1LG14g04950
SyntenyCp4.1LG14g04950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTCTTCCAACTACTTCATCATGGCTTTCATGGCTACTTTGGTGTTTTCAGCCCTCGACACCGGCCGAGCCGCTCGTCGTCTCCTTCAAACCGCTCAGCCGAGCGTGCCAGGGTTGCCCTCGTTGCCGCCTCTACCGCCCTTCCCGACGGTACCGGGAATGCCCTCTATTCCTAATCTCCCACAGCCTACGTTGCCAACTACTCAACCTTCTCTCCCTAAGATGCCTCCTCTTCCTAGCTTCCCCGGTACCATCCCGACCGGAGTGACATTGCCTCCGCTCCCGACTCTACCGTCCTTCCCAACGACTTTCCCGTCGATCCCTTTCCTCACACCGCCCCCGGCCGCTACCTCTTCACCTTGA

mRNA sequence

ATGCCCTCTTCCAACTACTTCATCATGGCTTTCATGGCTACTTTGGTGTTTTCAGCCCTCGACACCGGCCGAGCCGCTCGTCGTCTCCTTCAAACCGCTCAGCCGAGCGTGCCAGGGTTGCCCTCGTTGCCGCCTCTACCGCCCTTCCCGACGGTACCGGGAATGCCCTCTATTCCTAATCTCCCACAGCCTACGTTGCCAACTACTCAACCTTCTCTCCCTAAGATGCCTCCTCTTCCTAGCTTCCCCGGTACCATCCCGACCGGAGTGACATTGCCTCCGCTCCCGACTCTACCGTCCTTCCCAACGACTTTCCCGTCGATCCCTTTCCTCACACCGCCCCCGGCCGCTACCTCTTCACCTTGA

Coding sequence (CDS)

ATGCCCTCTTCCAACTACTTCATCATGGCTTTCATGGCTACTTTGGTGTTTTCAGCCCTCGACACCGGCCGAGCCGCTCGTCGTCTCCTTCAAACCGCTCAGCCGAGCGTGCCAGGGTTGCCCTCGTTGCCGCCTCTACCGCCCTTCCCGACGGTACCGGGAATGCCCTCTATTCCTAATCTCCCACAGCCTACGTTGCCAACTACTCAACCTTCTCTCCCTAAGATGCCTCCTCTTCCTAGCTTCCCCGGTACCATCCCGACCGGAGTGACATTGCCTCCGCTCCCGACTCTACCGTCCTTCCCAACGACTTTCCCGTCGATCCCTTTCCTCACACCGCCCCCGGCCGCTACCTCTTCACCTTGA

Protein sequence

MPSSNYFIMAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPTTQPSLPKMPPLPSFPGTIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSSP
Homology
BLAST of Cp4.1LG14g04950 vs. NCBI nr
Match: KAG6576876.1 (IgA FC receptor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221 bits (563), Expect = 2.74e-72
Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0

Query: 1   MPSSNYFIMAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPN 60
           M SSNYFIMAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPN
Sbjct: 1   MASSNYFIMAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPN 60

Query: 61  LPQPTLPTTQPSLPKMPPLPSFPGTIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSS 120
           LPQPTLPTTQPSLPKMPPLPSFPG+IPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSS
Sbjct: 61  LPQPTLPTTQPSLPKMPPLPSFPGSIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSS 120

BLAST of Cp4.1LG14g04950 vs. NCBI nr
Match: XP_022985116.1 (uncharacterized protein LOC111483197 [Cucurbita maxima])

HSP 1 Score: 219 bits (558), Expect = 1.58e-71
Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0

Query: 1   MPSSNYFIMAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPN 60
           M SSNYFIMAFMATLVFSA+DTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPN
Sbjct: 1   MASSNYFIMAFMATLVFSAIDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPN 60

Query: 61  LPQPTLPTTQPSLPKMPPLPSFPGTIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSS 120
           LPQPTLPTTQPSLPKMPPLPSFPG IPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSS
Sbjct: 61  LPQPTLPTTQPSLPKMPPLPSFPGGIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSS 120

BLAST of Cp4.1LG14g04950 vs. NCBI nr
Match: XP_023552840.1 (uncharacterized protein LOC111810366 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209 bits (532), Expect = 1.13e-67
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0

Query: 9   MAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPT 68
           MAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPT
Sbjct: 1   MAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPT 60

Query: 69  TQPSLPKMPPLPSFPGTIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSSP 121
           TQPSLPKMPPLPSFPGTIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSSP
Sbjct: 61  TQPSLPKMPPLPSFPGTIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSSP 113

BLAST of Cp4.1LG14g04950 vs. NCBI nr
Match: XP_022922560.1 (uncharacterized protein LOC111430528 [Cucurbita moschata])

HSP 1 Score: 204 bits (520), Expect = 7.63e-66
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0

Query: 9   MAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPT 68
           MAFMATLVFSA+DTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPT
Sbjct: 1   MAFMATLVFSAIDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPT 60

Query: 69  TQPSLPKMPPLPSFPGTIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSSP 121
           TQPSLPKMPPLPSFPG+IPTGVTLPPLPTLPSFP TFPSIPFLTPPPAATSSP
Sbjct: 61  TQPSLPKMPPLPSFPGSIPTGVTLPPLPTLPSFPMTFPSIPFLTPPPAATSSP 113

BLAST of Cp4.1LG14g04950 vs. NCBI nr
Match: XP_011654355.1 (uncharacterized protein LOC105435357 [Cucumis sativus])

HSP 1 Score: 162 bits (409), Expect = 1.05e-48
Identity = 96/129 (74.42%), Postives = 103/129 (79.84%), Query Frame = 0

Query: 1   MPSSNYFI-MAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLP------PLPPFPTVP 60
           M S  YF+ + FMATLVFSA+D+ RAARRLLQTA P++PGLPSLP      PLPP P  P
Sbjct: 1   MVSPKYFMTLTFMATLVFSAIDSSRAARRLLQTAPPNMPGLPSLPKLMGMPPLPPLPMGP 60

Query: 61  GMPSIPNLPQPTLPTTQPSLPKMPPLPSFPGTIP-TGVTLPPLPTLPSFPTTFPSIPFLT 120
           GMPSIPNLPQPT PT QPSLPK+PPLPS P  IP TGV  PPLPTLPS PTTFPSIPFLT
Sbjct: 61  GMPSIPNLPQPTFPTIQPSLPKLPPLPSLPVNIPATGVVFPPLPTLPSIPTTFPSIPFLT 120

BLAST of Cp4.1LG14g04950 vs. ExPASy TrEMBL
Match: A0A6J1J782 (uncharacterized protein LOC111483197 OS=Cucurbita maxima OX=3661 GN=LOC111483197 PE=4 SV=1)

HSP 1 Score: 219 bits (558), Expect = 7.67e-72
Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0

Query: 1   MPSSNYFIMAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPN 60
           M SSNYFIMAFMATLVFSA+DTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPN
Sbjct: 1   MASSNYFIMAFMATLVFSAIDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPN 60

Query: 61  LPQPTLPTTQPSLPKMPPLPSFPGTIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSS 120
           LPQPTLPTTQPSLPKMPPLPSFPG IPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSS
Sbjct: 61  LPQPTLPTTQPSLPKMPPLPSFPGGIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSS 120

BLAST of Cp4.1LG14g04950 vs. ExPASy TrEMBL
Match: A0A6J1E948 (uncharacterized protein LOC111430528 OS=Cucurbita moschata OX=3662 GN=LOC111430528 PE=4 SV=1)

HSP 1 Score: 204 bits (520), Expect = 3.69e-66
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0

Query: 9   MAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPT 68
           MAFMATLVFSA+DTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPT
Sbjct: 1   MAFMATLVFSAIDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPT 60

Query: 69  TQPSLPKMPPLPSFPGTIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSSP 121
           TQPSLPKMPPLPSFPG+IPTGVTLPPLPTLPSFP TFPSIPFLTPPPAATSSP
Sbjct: 61  TQPSLPKMPPLPSFPGSIPTGVTLPPLPTLPSFPMTFPSIPFLTPPPAATSSP 113

BLAST of Cp4.1LG14g04950 vs. ExPASy TrEMBL
Match: A0A0A0KWI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G182290 PE=4 SV=1)

HSP 1 Score: 162 bits (409), Expect = 5.07e-49
Identity = 96/129 (74.42%), Postives = 103/129 (79.84%), Query Frame = 0

Query: 1   MPSSNYFI-MAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLP------PLPPFPTVP 60
           M S  YF+ + FMATLVFSA+D+ RAARRLLQTA P++PGLPSLP      PLPP P  P
Sbjct: 1   MVSPKYFMTLTFMATLVFSAIDSSRAARRLLQTAPPNMPGLPSLPKLMGMPPLPPLPMGP 60

Query: 61  GMPSIPNLPQPTLPTTQPSLPKMPPLPSFPGTIP-TGVTLPPLPTLPSFPTTFPSIPFLT 120
           GMPSIPNLPQPT PT QPSLPK+PPLPS P  IP TGV  PPLPTLPS PTTFPSIPFLT
Sbjct: 61  GMPSIPNLPQPTFPTIQPSLPKLPPLPSLPVNIPATGVVFPPLPTLPSIPTTFPSIPFLT 120

BLAST of Cp4.1LG14g04950 vs. ExPASy TrEMBL
Match: A0A5A7TLS8 (Proline-rich receptor-like protein kinase PERK2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00030 PE=4 SV=1)

HSP 1 Score: 148 bits (374), Expect = 1.22e-43
Identity = 94/133 (70.68%), Postives = 99/133 (74.44%), Query Frame = 0

Query: 1   MPSSNYFI-MAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLP------PLPPFPTVP 60
           M S  YFI + FMATLVFSA+DT RAAR LLQTA P++PGLPSLP      PLPP P  P
Sbjct: 1   MASPKYFIILTFMATLVFSAIDTSRAARCLLQTAPPNMPGLPSLPKPIGLPPLPPLPMGP 60

Query: 61  GMPSIPNLPQPTLPTTQPSLPKMPPLPSFPGTIPT-GVTLPPLPT----LPSFPTTFPSI 120
           GM SIPN PQPT PT QPSLPK+PPLPS P  IPT G  LPPLPT    LPS PTTFPSI
Sbjct: 61  GMSSIPNFPQPTFPTIQPSLPKLPPLPSLPLNIPTTGAVLPPLPTSLPTLPSIPTTFPSI 120

BLAST of Cp4.1LG14g04950 vs. ExPASy TrEMBL
Match: A0A5D3E045 (Proline-rich receptor-like protein kinase PERK2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00030 PE=4 SV=1)

HSP 1 Score: 146 bits (368), Expect = 9.96e-43
Identity = 93/133 (69.92%), Postives = 98/133 (73.68%), Query Frame = 0

Query: 1   MPSSNYF-IMAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLP------PLPPFPTVP 60
           M S  YF I+ FMATLVFSA+DT RAAR LLQTA P++PGLPSLP      PLPP P  P
Sbjct: 1   MASPKYFMILTFMATLVFSAIDTSRAARCLLQTAPPNMPGLPSLPKPIGLPPLPPLPMGP 60

Query: 61  GMPSIPNLPQPTLPTTQPSLPKMPPLPSFPGTIPT-GVTLPPL----PTLPSFPTTFPSI 120
           G  SIPN PQPT PT QPSLPK+PPLPS P  IPT G  LPPL    PTLPS PTTFPSI
Sbjct: 61  GTSSIPNFPQPTFPTIQPSLPKLPPLPSLPLNIPTTGAVLPPLTNSLPTLPSIPTTFPSI 120

BLAST of Cp4.1LG14g04950 vs. TAIR 10
Match: AT4G38080.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 51.6 bits (122), Expect = 5.1e-07
Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 0

Query: 2   PSSNYFIMAFMATLVFSALDTGRAA-RRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPN 61
           P  N F+ + +  L F++  T  +A R LLQ+   + P   + PPLP   T+P +PS+P 
Sbjct: 3   PLKNSFVTSLVIALTFTSFFTSLSAHRHLLQSTPVTQPPALTFPPLPK-TTMPPVPSLPT 62

Query: 62  LPQPTLPTTQPSLPKMPPLPSFPGT-IPT--GVTLPPLPTLP--SFPTTFP-----SIPF 117
             Q TLP  QP+LP+   LP  P T IP+      P +P +P  +FP+ FP     +IPF
Sbjct: 63  PGQQTLPQPQPTLPQPTGLPPMPSTQIPSLPNQVQPTIPNIPQINFPSNFPFNFPFNIPF 122

BLAST of Cp4.1LG14g04950 vs. TAIR 10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 45.1 bits (105), Expect = 4.8e-05
Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = 0

Query: 35  PSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPTTQPSLPKM--PPLPSFPGTIPTGVTL 94
           P +P +P+ P LPP P +P  PS+P +P    P T P++P +  PP P+ P  IPT  TL
Sbjct: 276 PLIPSIPT-PTLPPNPLIPSPPSLPPIPLIPTPPTLPTIPLLPTPPTPTLP-PIPTIPTL 335

Query: 95  PPLPTLPSFPTTFPSIPFLTPPPAATSSP 122
           PPLP LP  P   P  P L PPP +   P
Sbjct: 336 PPLPVLPPVPIVNP--PSLPPPPPSFPVP 360

BLAST of Cp4.1LG14g04950 vs. TAIR 10
Match: AT2G22510.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 41.6 bits (96), Expect = 5.3e-04
Identity = 42/129 (32.56%), Postives = 66/129 (51.16%), Query Frame = 0

Query: 6   YFIMAFMATLVFSALDTGRAARRLLQTAQPSV--PGLPSLPPL-----PPFP-------- 65
           +++ + +  L F++  TG +A R L  + P++  P   + PPL     PPFP        
Sbjct: 3   HWLSSLVIALTFTSFFTGLSASRHLLQSTPAITPPVTTTFPPLPTTTMPPFPPSTSLPQP 62

Query: 66  -TVPGMPS--IPNLPQPTLPTTQPSLPKMPPLPSFPGTIPTGVTLPPLPTLPSFPTTFPS 117
              P +PS  IP+LP P  P   P+ P++  +P+FP +IP            + PT+ P+
Sbjct: 63  TAFPPLPSSQIPSLPNPAQPINIPNFPQI-NIPNFPISIPNNFPF-------NLPTSIPT 122

BLAST of Cp4.1LG14g04950 vs. TAIR 10
Match: AT1G44224.1 (ECA1 gametogenesis related family protein )

HSP 1 Score: 41.2 bits (95), Expect = 6.9e-04
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0

Query: 37  VPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPTTQPSLPKMPPLPSFPGTIPTGVTLPPLP 96
           +PG PS+P LP  P +P +PS+PN+  P+LPT  P +P +P +P+ PG       LP +P
Sbjct: 76  LPGFPSIPWLPNIPGIPIIPSLPNI--PSLPTI-PEIPNIPRIPNIPG-------LPNIP 135

Query: 97  TLPSFPTTFPSIPFLTPPP 116
            LP+ P + P IP L P P
Sbjct: 136 GLPNLP-SIPRIPGLPPLP 143

BLAST of Cp4.1LG14g04950 vs. TAIR 10
Match: AT2G34870.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 40.8 bits (94), Expect = 9.0e-04
Identity = 46/126 (36.51%), Postives = 62/126 (49.21%), Query Frame = 0

Query: 1   MPSSNYFIMAFMATLVFSALDTGRAARRL---------LQTAQPSVPGLPSLPPLPPFPT 60
           M SS+   +A    L+F  +     ARRL         + T       LP  P LP    
Sbjct: 1   MASSSLISVALTLILIFHLMPETTVARRLTDQKPSDEVVTTTTDEANNLPFPPGLP---- 60

Query: 61  VPGMPSIPNLPQPTLPTTQP-SLPKMPPLPSFPGTIPTGVTLPPLPTLPSFP-TTFPSIP 116
             G+P +P+L  P +P+  P ++P++P    FP   PT    PP P+LP FP  TFP +P
Sbjct: 61  FGGVPPLPSLFPPFVPSPFPGNIPRLP----FPFPFPTS---PPAPSLPGFPGFTFPPLP 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6576876.12.74e-7298.35IgA FC receptor, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022985116.11.58e-7197.52uncharacterized protein LOC111483197 [Cucurbita maxima][more]
XP_023552840.11.13e-67100.00uncharacterized protein LOC111810366 [Cucurbita pepo subsp. pepo][more]
XP_022922560.17.63e-6697.35uncharacterized protein LOC111430528 [Cucurbita moschata][more]
XP_011654355.11.05e-4874.42uncharacterized protein LOC105435357 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1J7827.67e-7297.52uncharacterized protein LOC111483197 OS=Cucurbita maxima OX=3661 GN=LOC111483197... [more]
A0A6J1E9483.69e-6697.35uncharacterized protein LOC111430528 OS=Cucurbita moschata OX=3662 GN=LOC1114305... [more]
A0A0A0KWI75.07e-4974.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G182290 PE=4 SV=1[more]
A0A5A7TLS81.22e-4370.68Proline-rich receptor-like protein kinase PERK2 isoform X2 OS=Cucumis melo var. ... [more]
A0A5D3E0459.96e-4369.92Proline-rich receptor-like protein kinase PERK2 isoform X2 OS=Cucumis melo var. ... [more]
Match NameE-valueIdentityDescription
AT4G38080.15.1e-0739.68hydroxyproline-rich glycoprotein family protein [more]
AT5G15780.14.8e-0544.94Pollen Ole e 1 allergen and extensin family protein [more]
AT2G22510.15.3e-0432.56hydroxyproline-rich glycoprotein family protein [more]
AT1G44224.16.9e-0444.30ECA1 gametogenesis related family protein [more]
AT2G34870.19.0e-0436.51hydroxyproline-rich glycoprotein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..88
NoneNo IPR availablePANTHERPTHR33088:SF33PROTEIN APP1-LIKEcoord: 1..118
IPR044659Protein PELPK-likePANTHERPTHR33088MUCIN-2coord: 1..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g04950.1Cp4.1LG14g04950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity