Cp4.1LG14g04950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCTCTTCCAACTACTTCATCATGGCTTTCATGGCTACTTTGGTGTTTTCAGCCCTCGACACCGGCCGAGCCGCTCGTCGTCTCCTTCAAACCGCTCAGCCGAGCGTGCCAGGGTTGCCCTCGTTGCCGCCTCTACCGCCCTTCCCGACGGTACCGGGAATGCCCTCTATTCCTAATCTCCCACAGCCTACGTTGCCAACTACTCAACCTTCTCTCCCTAAGATGCCTCCTCTTCCTAGCTTCCCCGGTACCATCCCGACCGGAGTGACATTGCCTCCGCTCCCGACTCTACCGTCCTTCCCAACGACTTTCCCGTCGATCCCTTTCCTCACACCGCCCCCGGCCGCTACCTCTTCACCTTGA ATGCCCTCTTCCAACTACTTCATCATGGCTTTCATGGCTACTTTGGTGTTTTCAGCCCTCGACACCGGCCGAGCCGCTCGTCGTCTCCTTCAAACCGCTCAGCCGAGCGTGCCAGGGTTGCCCTCGTTGCCGCCTCTACCGCCCTTCCCGACGGTACCGGGAATGCCCTCTATTCCTAATCTCCCACAGCCTACGTTGCCAACTACTCAACCTTCTCTCCCTAAGATGCCTCCTCTTCCTAGCTTCCCCGGTACCATCCCGACCGGAGTGACATTGCCTCCGCTCCCGACTCTACCGTCCTTCCCAACGACTTTCCCGTCGATCCCTTTCCTCACACCGCCCCCGGCCGCTACCTCTTCACCTTGA ATGCCCTCTTCCAACTACTTCATCATGGCTTTCATGGCTACTTTGGTGTTTTCAGCCCTCGACACCGGCCGAGCCGCTCGTCGTCTCCTTCAAACCGCTCAGCCGAGCGTGCCAGGGTTGCCCTCGTTGCCGCCTCTACCGCCCTTCCCGACGGTACCGGGAATGCCCTCTATTCCTAATCTCCCACAGCCTACGTTGCCAACTACTCAACCTTCTCTCCCTAAGATGCCTCCTCTTCCTAGCTTCCCCGGTACCATCCCGACCGGAGTGACATTGCCTCCGCTCCCGACTCTACCGTCCTTCCCAACGACTTTCCCGTCGATCCCTTTCCTCACACCGCCCCCGGCCGCTACCTCTTCACCTTGA MPSSNYFIMAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPTTQPSLPKMPPLPSFPGTIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSSP Homology
BLAST of Cp4.1LG14g04950 vs. NCBI nr
Match: KAG6576876.1 (IgA FC receptor, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 221 bits (563), Expect = 2.74e-72 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. NCBI nr
Match: XP_022985116.1 (uncharacterized protein LOC111483197 [Cucurbita maxima]) HSP 1 Score: 219 bits (558), Expect = 1.58e-71 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. NCBI nr
Match: XP_023552840.1 (uncharacterized protein LOC111810366 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 209 bits (532), Expect = 1.13e-67 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. NCBI nr
Match: XP_022922560.1 (uncharacterized protein LOC111430528 [Cucurbita moschata]) HSP 1 Score: 204 bits (520), Expect = 7.63e-66 Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. NCBI nr
Match: XP_011654355.1 (uncharacterized protein LOC105435357 [Cucumis sativus]) HSP 1 Score: 162 bits (409), Expect = 1.05e-48 Identity = 96/129 (74.42%), Postives = 103/129 (79.84%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. ExPASy TrEMBL
Match: A0A6J1J782 (uncharacterized protein LOC111483197 OS=Cucurbita maxima OX=3661 GN=LOC111483197 PE=4 SV=1) HSP 1 Score: 219 bits (558), Expect = 7.67e-72 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. ExPASy TrEMBL
Match: A0A6J1E948 (uncharacterized protein LOC111430528 OS=Cucurbita moschata OX=3662 GN=LOC111430528 PE=4 SV=1) HSP 1 Score: 204 bits (520), Expect = 3.69e-66 Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. ExPASy TrEMBL
Match: A0A0A0KWI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G182290 PE=4 SV=1) HSP 1 Score: 162 bits (409), Expect = 5.07e-49 Identity = 96/129 (74.42%), Postives = 103/129 (79.84%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. ExPASy TrEMBL
Match: A0A5A7TLS8 (Proline-rich receptor-like protein kinase PERK2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00030 PE=4 SV=1) HSP 1 Score: 148 bits (374), Expect = 1.22e-43 Identity = 94/133 (70.68%), Postives = 99/133 (74.44%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. ExPASy TrEMBL
Match: A0A5D3E045 (Proline-rich receptor-like protein kinase PERK2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00030 PE=4 SV=1) HSP 1 Score: 146 bits (368), Expect = 9.96e-43 Identity = 93/133 (69.92%), Postives = 98/133 (73.68%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. TAIR 10
Match: AT4G38080.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 51.6 bits (122), Expect = 5.1e-07 Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. TAIR 10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 45.1 bits (105), Expect = 4.8e-05 Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. TAIR 10
Match: AT2G22510.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 41.6 bits (96), Expect = 5.3e-04 Identity = 42/129 (32.56%), Postives = 66/129 (51.16%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. TAIR 10
Match: AT1G44224.1 (ECA1 gametogenesis related family protein ) HSP 1 Score: 41.2 bits (95), Expect = 6.9e-04 Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0
BLAST of Cp4.1LG14g04950 vs. TAIR 10
Match: AT2G34870.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 40.8 bits (94), Expect = 9.0e-04 Identity = 46/126 (36.51%), Postives = 62/126 (49.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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