Cp4.1LG14g04940 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG14g04940
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionMADS-box transcription factor 23-like isoform X2
LocationCp4.1LG14: 1356557 .. 1362907 (+)
RNA-Seq ExpressionCp4.1LG14g04940
SyntenyCp4.1LG14g04940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATAAGGTCAATTACTGATCGCTACAACAAGATGAAAGAGGAGCAAAATCAGTTGATGAACCCTGTTTCAGAACTCCAGGTAATCTTTCTTCGTTCATCTGCAATGGCAATTTCCTCGTTAACATGAACATCTGCATGTTTGCTGTACTTTGAATGAAGCACAAACTTTGAATAGAGTTTCCAACCAATACATTGAGACAACTATGTTCCTCAAAGATGATATTTTTCCAAGGTGAAATTCGATGGCTTGGATCATAAGATGGTACTCCATAGGTTATGCCTCAGTGAGAAGCAAAATAACGACGATGGGGATGATAAAGTGAGAAAAAAGGCCAAAGACATTAAGAAAATAACTTCTGTGACAGACTCTCGATCCCTGCTGCAACATAATTAGAGAACTTGTTTGTGTTGTGATCTTCAAAACGTTTATGAAAATTGGATCCATATGAATTAACGATATGCTTCCTTAGGCAATTACACAAGGAGATAAGAAGGGGGGCAGTAAGCAGAGTAAGGAGATATCGAGTGGGGGAAGTAGTAAGAAGGAAGAGATAAAGGGCAGGACCCATGTAACCATCTGAGAAGCGTTTAAGTTGTTTGAAAAGAAAAAACGTGAAGTGTTTTAGTAGTTGAGGGCAGTGGAGAAAGGGGAAAGAGTTAGAAGGTTATTCTTTTGGGAGTAAGAGGAGCTCTAGATTTCTCCTAAATTGTACTTCACTTTTGCTCAGAAATGAACCTTCTTTTAATCTTATGGAAGTTGTATGAGAGAAGTGAGTTTGTCGAAGAATGATGGAAAATAAAAAGATGGAGAATCAAAATAACGCTGTGGTTGAAAGTTTTCCAAAGTTGAGGAAATTTTCCTTGGTTTAGGGAGGTTTATTATTTCGACTTTATTAACGGAACCTCTACTATGTCCTTGGCCCTAATTAATGTATTTTGTGAAAATAAGCTATGGACTTGAACGACCTTTTGTAACTTCTCCTTTTGGCTTCCAAACCTTCTCAGGCATCAATGGTGTTGAGATTTTAATTTTTTGAATATCCACGAGTGTGTGTTAGTTTGCACATTAGTTGCCAAAACAGCTTACATATGATATTAAACAGCTTGTAGGTTATAGTGGTAAGTGACCATTATAGCTTAAGCTCATTTCCTCTAAGTTGATTACTATTTATAATATTCCTTATTGACCACTAGATCAACCAGAGGTGGTTGAGAATATGTATAAAAGATTAAATATATCATAACCCATCGACTTAAGTTTTACAGTTCAATGGTAATTCAACAGTCTTAGAGGACGAAGTCCAATGTACTTTGCAACATTGTTTCCTCTCTAATTGATATCAACCTATTCTAAGCTTTTGGAGTTTAGTGTTAGTAATGATTTAATGGACAGATATGTTTTCCTTTTTCCTCACTTGCCCTTGTTCTTGATGGTTAGCAGTTAGGACAACTTGTAAACTATACCTAGTGTTCCTGTTTATTATGTGATCCCTGTGTCTTGGGTGGGTTGGTCTGGCCTTTCTTTTCATTTTTTCAAGTCTACACAATCCCCAAGGCTCAAATCTAGAGACATCAACGGTTTTTCCTTCTATTATACTTTCACTTATAAAAGAAGGAAACAATGTGGCATAATAAAACCCCTATGATGTAAACTTATCAACCTTGGAAGCACCAAGAAATCTCAAAACAAAATACTTCCAATAATAATGTGTATGAGCACATTGCGATTAAAGGTACCACTGCAAGAGTTATTTAAAATCATGGATGTAGACTATAGCCCAGAATAGGACTGACAGAAAAAATAAATCCATTTACCCCAAAATCAGTAAGTACAGCACATAAATAATAGTTTCTTATGCCTTTACAATGTTTTTATTACTTGGTTGAAATATATCCCTTTTGATTCAAAATGAAGTAAAGTCATGCATTCCAAATAAATTAGTTAAAATCATTCGAATGGTTCAACATACCTATGCCACAAGTAATACTGTAACGCTGACCATCTGTTCTACAATTGTTAGTTTTGGAAAAGAGAGGCAGCTGGTTTGAAGCAACAACTGCATTACATGCAAGAATGTCACAGGTACTCCAACTCTTGCTGTGCTCTATATGTTATACAAGGGAAAAAAAAATCAGCCAAAGATGTTTAAGGAGAGTAAATATTAATATATGTTCAACAATTGCTACATTTAAGTCCTCAGTGCTATATCTCATCAGAAAGTTGCTGAGGAATCCCAATCTCCAATTGTAGATTCAAATGACAAATATAAACGATGCCTGAGTAGAAATTAGTAAAAGTCCTTGAAAATGAATTTCTGTAAGAAGATCATGTTCCACCGAACAAAAGTAATTAAAAAAATTAGGTGTTATATTAACTTATTTTGCAAAATGAAAATCAATGAAAATTGACTAGAGGTCCTAAATTTTATCATTCTGAAAACAGAAATTAACAATATTGACATGCTTTTTAAAGACAATATTCCAACGCAAAAAAGTTCTCAAATAAATACTATTAATGACATTTCAGCCTAGACACTTGCTATTATATCAAAGTGGGCAAAACCCAAGTGATCCTCTATTTCACAGGTCATTCACAGAAAACCAATGTTCTTAACAATCCAGTGCCGAAATATTATACGATGAATGAGAAAAATGGCAATGTTAATTTAGGAGCTAAAAAGATCCCTACCAAAAAGTTATGAGATAAAAAGATAGGTGTTTCTCTCTACTACAAAGGCTAAAATCCTTCCAATCCAAAGAATCAAATAAATGATTGACAACATGCACATAGGCATCAATAATTGCATATGTTCTGACCCCTTGGTCGAGAGAATATGCCTTAAAAAGTTGAACTATGCGTAAGTTGACTAAAATTTTAGAACTTTATATTCAAAGGGTAAGAGTAACAACAGAATTTTTAGAGAAAGGGAGAAAACTTGGGAAGAAGTTTGGTTAGTAGGTTTCATACCTCTCTACGAGCCCCAGTTAGTTAATATTGTTGTAATTACCTTCTAACAATTATTTTACTTGAGTGGAGCCCCTTATTATTTTTGTTTGTCTCCCTATGGAGGTTGATTTTTTTTATAAAAAAAAGTTCCCCCATACTATTTCATTTTTGCACAATGAAAGAATGATTTCTCAGCATATACTAGCCTATCAGTATCATAGGGCTCTAAATCCACTTTCCATTGTCAGTGCTAGAATAACTTTATGTGGTAAGTGATAATTTCATAACATATTTTAAGCATGAGTGGTAGGCATCACACAATCCTTAGTTCTGTGAGTGGGATAAATTAAAACAATTCAAGTCTGAATCTGTAGGGAATGGTAAAATAATTCAACATTGTACGCAAATGTGCAAAGGAATTCCTAACATATCCACGCTTCTATATTTGCAGACAATTAATGGGTGAAGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTGGAAAGCCAGTTGGAGATGAGTTTGAAAGGTGTCCGTGTGAAAAAGGTATAAACTATGAAGAGAGCTCAATAAAACATACACTGTATACGGATGTTTATGTGTTTTTGTATTTGTCTTGCAGGAAAAGATTTTAAGCGAGGAAATTACTCAACTAAGACAGAAGGTTCCCCCCACTGTAAACATCCATGTATCTTACTATACCAAGAAGTGCTGTAACAACAGCTAACTTGCAATAATTATCTTGCAGGGGAACCATATGCATCAAGAAAATCTGGAACTCTACAAGAAATTAGATATGATTCGTAAGGAAAATGCAGAACTGCAAACGAAGGTAGAGATACAAAACATATGTTGAAATGCTTCTTTTTCTTTTTTAATTGTAAAAAAAGGAACTTTTATTGAGAAAATGAAAGGGCATAAAATACAAACCCACAAAAAAAGAAGCCCAATCACTAACTAAAGAAACAAATAACAATCCAAAAGGATTCATAGGCCAGGTAAGAGATGCTCATAGGGACTCGTTATACCTAACAAACACCAAAACNAGAGGATTCATAGGCCAGGTAATAGATGCTCATAGGGACTCGTTATACCTAACAAACACCAAAACCTCCTCTGAAGATCTCTCGACATCCCTAAAAACTCTGTTACTTATTTCAATCCAAATCCCCCTCAACAAGGCAAAGAAACAAGACAGCCACAAAAATCTTCCTTAATCCTAAAACAGGGGATTCAAGAGCCCTCCACAATCGTGGGGCTGCGCTCTCTACCACGAGCCAAACATAGGCCAGATGTTATTGAAATGCTTCATTGTCAACTTTTTCACAAGCCTTTCTTAGTTATAAGAATTCAGAATTCTTACAGCTTATTTTTAACCGATCAGGATAATTTTTGGGTTTCTTCCATGCACCATTCTTTCTTGTTTTCCCTTTTCTTTTCTTATATATGTGTGTGTGTGTGTATATATATATATAGATATAGATATATAAATACACTTTTGGGTGGGGAGTGGGTTATGGGTGGGAGAGGGAGAGGGAGAGGCGGATTGCTGACACAGGAAAGGGACTTATTTTCCTGATAAATAAGCTTGACTGTGCGTTTTTTAAGTATCAGGTCTATGGACCCATGGAAGTGGATAAAACGAGCAGTAGCACAGTTCATCAATTCACTTTTGCCAATAGATACGGTATGCCTGCTCCCGTCCATCTACAGCTAAGACAGCCACAACCACAGAACAACGAAACATCAATACCAGGGATAAAGCTGGGGTATGTTCTAGCAAACTGTGTCATGACATGAATTAAATTGCATATCACATTCATCTGAATTTCAACCTATACTACACAACTTTTACTCCCAGGCCACACTGAAATAGATTTATTGAAACTTGTAACAGATTACAACTGCAATAACAGCATTTGGATCATGGATGATTTGTCCATGGTCATTTCACCAACTTGTCATAAAGTACGCTCATGTTCAACATCAAGGTGTCTCCTGCTTCAGTCACTAGTGCATTAACATCACCAGATCCATCACATTTGGTATGCAATTTTCTTCAAACACTATATGTGATAAACTTAGCAGCCAGACCAGCTACCTATGTAAGTTTACCCATAATGACAATGCATCATATGTGCCATGCGTTGTTCTACCTGTTCTTATAGTTTGTTGTGTTAATTAATTAGACCAGACTCTGAAGTTGTGATGCCAATTAGCTGAATATAAATTAATGTTTATCCAATTTTATATAAGGTGGTACTAAGCTGGTTGGCAGTTGAATGCATAAGAGATGCCTATAGTGTGGGCTTCTTTTTGAGTTGCTAAAATCAACCATATGAAATAATCCTTTATCCTAAAAAAGTGAGCTGTTTTGGGGGGTTAAAATAACCGTTCACATCCTTTGCTGATACTTCACTTGCGTGTATTCTCAAACTTGACTAAAATGATCAATGAAGGAGATCAACAATGTAAAGCCGCTGTTAGACCACAGAATTTTAAACCAGCAAAGGAATTTAAAGCTGAAGTTCTCTCTCAATTCACTTTCATAATCACCAATCCTCAAAACTTGAGTTGTTAGCTTATGATTATTTTGTCTAAATATTTAAGCACTCCGCAATATCTGCCCTGTCATACCCAACTTCAAGTAATATTATGTAGAAATGTCAATCTATGACTAATCCTTCAATTGATTTTTCTATTTAAGATATTTAAGCTTCAAATATGGCTAGAATGGTTGATTAAGAATCTAAAAAAACTATGTCAGAAACTAGAAAGTGTTGGTGGAGTAACCATTTTGCAATTTTCAAAAGAAAGAGACATTCATTCATTTCATCTTTTGGATATATTACATGCTTTTCCCCAATTATATTCCGCTTCAGGGTATTTTTACTTGTTAAGGCAGGTGNAAGAGACATTCATTCATTTCATCTTTTGGATATATTACATGCTTTCCCCCATTTATATTCCGCTTCAGGGTATTTTTACTTGTTAAGGCAGGTGCTAGGTTTGCTACCTCCTTTCAATAGCCCAGAAGTTGGTTTTTGTAGACAAAGAAATCTTATTCGTTCAGCTCCATGGTAATGTTAACCCTCCTAGAGACCTTAACCCTCCATTGTAGAAAAAGAAATCTTAACCCTCCTAAAGACCTTCCAGAGAGGAGATGGCATCATTTCATCTTACTCAAACCAGGATGCAACTTGACTTTGTAACCCTATATGTTCGCATTATACATATATATCTTTGTGCATGTACGGTTGAGAAACAAGGATATTTCAGCTAAATGGATATGGTGATCCCATCAGTTGCAACCAAGTATTGTCCACACCCTTTTGAATAGACCGTTGGCACTTTTAGAAACCTATGGAAAAAAAAAGTTCGGTTGAACTTCATTTTCTT

mRNA sequence

CATAAGGTCAATTACTGATCGCTACAACAAGATGAAAGAGGAGCAAAATCAGTTGATGAACCCTGTTTCAGAACTCCAGTTTTGGAAAAGAGAGGCAGCTGGTTTGAAGCAACAACTGCATTACATGCAAGAATGTCACAGACAATTAATGGGTGAAGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTGGAAAGCCAGTTGGAGATGAGTTTGAAAGGTGTCCGTGTGAAAAAGGAAAAGATTTTAAGCGAGGAAATTACTCAACTAAGACAGAAGGTCTATGGACCCATGGAAGTGGATAAAACGAGCAGTAGCACAGTTCATCAATTCACTTTTGCCAATAGATACGGTATGCCTGCTCCCGTCCATCTACAGCTAAGACAGCCACAACCACAGAACAACGAAACATCAATACCAGGGATAAAGCTGGGATTACAACTGCAATAACAGCATTTGGATCATGGATGATTTGTCCATGGTCATTTCACCAACTTGTCATAAAGTACGCTCATGTTCAACATCAAGGTGTCTCCTGCTTCAGTCACTAGTGCATTAACATCACCAGATCCATCACATTTGGTATGCAATTTTCTTCAAACACTATATGTGATAAACTTAGCAGCCAGACCAGCTACCTATGTAAGTTTACCCATAATGACAATGCATCATATGTGCCATGCGTTGTTCTACCTGTTCTTATAGTTTGTTGTGTTAATTAATTAGACCAGACTCTGAAGTTGTGATGCCAATTAGCTGAATATAAATTAATGTTTATCCAATTTTATATAAGGTGGTACTAAGCTGGTTGGCAGTTGAATGCATAAGAGATGCCTATAGTGTGGGCTTCTTTTTGAGTTGCTAAAATCAACCATATGAAATAATCCTTTATCCTAAAAAAGTGAGCTGTTTTGGGGGGTTAAAATAACCGTTCACATCCTTTGCTGATACTTCACTTGCGTGTATTCTCAAACTTGACTAAAATGATCAATGAAGGAGATCAACAATGTAAAGCCGCTGTTAGACCACAGAATTTTAAACCAGCAAAGGAATTTAAAGCTGAAGTTCTCTCTCAATTCACTTTCATAATCACCAATCCTCAAAACTTGAGTTGTTAGCTTATGATTATTTTGTCTAAATATTTAAGCACTCCGCAATATCTGCCCTGTCATACCCAACTTCAAGTAATATTATGTAGAAATGTCAATCTATGACTAATCCTTCAATTGATTTTTCTATTTAAGATATTTAAGCTTCAAATATGGCTAGAATGGTTGATTAAGAATCTAAAAAAACTATGTCAGAAACTAGAAAGTGTTGGTGGAGTAACCATTTTGCAATTTTCAAAAGAAAGAGACATTCATTCATTTCATCTTTTGGATATATTACATGCTTTTCCCCAATTATATTCCGCTTCAGGGTATTTTTACTTGTTAAGGCAGGTGNAAGAGACATTCATTCATTTCATCTTTTGGATATATTACATGCTTTCCCCCATTTATATTCCGCTTCAGGGTATTTTTACTTGTTAAGGCAGGTGCTAGGTTTGCTACCTCCTTTCAATAGCCCAGAAGTTGGTTTTTGTAGACAAAGAAATCTTATTCGTTCAGCTCCATGGTAATGTTAACCCTCCTAGAGACCTTAACCCTCCATTGTAGAAAAAGAAATCTTAACCCTCCTAAAGACCTTCCAGAGAGGAGATGGCATCATTTCATCTTACTCAAACCAGGATGCAACTTGACTTTGTAACCCTATATGTTCGCATTATACATATATATCTTTGTGCATGTACGGTTGAGAAACAAGGATATTTCAGCTAAATGGATATGGTGATCCCATCAGTTGCAACCAAGTATTGTCCACACCCTTTTGAATAGACCGTTGGCACTTTTAGAAACCTATGGAAAAAAAAAGTTCGGTTGAACTTCATTTTCTT

Coding sequence (CDS)

ATGAAAGAGGAGCAAAATCAGTTGATGAACCCTGTTTCAGAACTCCAGTTTTGGAAAAGAGAGGCAGCTGGTTTGAAGCAACAACTGCATTACATGCAAGAATGTCACAGACAATTAATGGGTGAAGAACTATCTGGCCTGAGTGTCAAAGATCTACAAAATCTGGAAAGCCAGTTGGAGATGAGTTTGAAAGGTGTCCGTGTGAAAAAGGAAAAGATTTTAAGCGAGGAAATTACTCAACTAAGACAGAAGGTCTATGGACCCATGGAAGTGGATAAAACGAGCAGTAGCACAGTTCATCAATTCACTTTTGCCAATAGATACGGTATGCCTGCTCCCGTCCATCTACAGCTAAGACAGCCACAACCACAGAACAACGAAACATCAATACCAGGGATAAAGCTGGGATTACAACTGCAATAA

Protein sequence

MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQKVYGPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ
Homology
[Close]
BLAST of Cp4.1LG14g04940 vs. ExPASy Swiss-Prot
Match: Q9SI38 (MADS-box transcription factor ANR1 OS=Arabidopsis thaliana OX=3702 GN=ANR1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-23
Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           +KEEQ+QL+N  SE++FW+RE A L+QQL Y+QECHR+L+GEELSG++  DLQNLE QL 
Sbjct: 73  VKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMNANDLQNLEDQLV 132

Query: 61  MSLKGVRVKKEKILSEEITQ----------------------------LRQKVYGPMEVD 120
            SLKGVR+KK+++++ EI +                            L++KV+G     
Sbjct: 133 TSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKENIKLQKKVHGRTNAI 192

Query: 121 KTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQL 140
           + +SS       +N     AP  LQL Q QP   E S   I+LGLQL
Sbjct: 193 EGNSSV---DPISNGTTTYAPPQLQLIQLQPAPREKS---IRLGLQL 233

[Close]
BLAST of Cp4.1LG14g04940 vs. ExPASy Swiss-Prot
Match: Q6EP49 (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS27 PE=2 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 3.7e-22
Identity = 69/169 (40.83%), Postives = 97/169 (57.40%), Query Frame = 0 

Query: 2   KEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLEM 61
           K+EQ  + NP SEL+FW+REAA L+QQLH +QE HRQLMGE+LSGL+VK+LQ+LE+QLE+
Sbjct: 73  KDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEI 132

Query: 62  SLKGVRVKKEKILSEEI----------------------------TQLRQKVY---GPME 121
           SL+ VR KK+ +L +EI                             +L +K+Y   GP E
Sbjct: 133 SLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENAELYKKIYETEGPSE 192

Query: 122 VDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQL 140
           V++  S T + F    +  +P  + L          +++ P  KLGLQL
Sbjct: 193 VNR-DSPTPYNFAVIEKTNVPVQLGLSTLPQHSDAEQSTAP--KLGLQL 238

[Close]
BLAST of Cp4.1LG14g04940 vs. ExPASy Swiss-Prot
Match: Q9SZJ6 (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.2e-21
Identity = 49/83 (59.04%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 2   KEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLEM 61
           K EQ QL+NP SE++FW+REAA L+Q+LH +QE HRQ+MGE+L+GLSV +L +LE+Q+E+
Sbjct: 73  KIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEI 132

Query: 62  SLKGVRVKKEKILSEEITQLRQK 85
           SL+G+R++KE++L++EI +L QK
Sbjct: 133 SLRGIRMRKEQLLTQEIQELSQK 155

[Close]
BLAST of Cp4.1LG14g04940 vs. ExPASy Swiss-Prot
Match: Q38840 (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana OX=3702 GN=AGL17 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 5.4e-21
Identity = 51/83 (61.45%), Postives = 71/83 (85.54%), Query Frame = 0 

Query: 2   KEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLEM 61
           K E+ +LMNP SE++FW+REA  L+Q+LH +QE +RQL G EL+GLSVK+LQN+ESQLEM
Sbjct: 73  KMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEM 132

Query: 62  SLKGVRVKKEKILSEEITQLRQK 85
           SL+G+R+K+E+IL+ EI +L +K
Sbjct: 133 SLRGIRMKREQILTNEIKELTRK 155

[Close]
BLAST of Cp4.1LG14g04940 vs. ExPASy Swiss-Prot
Match: Q6VAM4 (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS23 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-19
Identity = 47/84 (55.95%), Postives = 69/84 (82.14%), Query Frame = 0 

Query: 2   KEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLEM 61
           KE+ +Q MN  SE + W++EAA L+QQLH +QE HRQL+G++LSGL V+DLQNLES+LEM
Sbjct: 73  KEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEM 132

Query: 62  SLKGVRVKKEKILSEEITQLRQKV 86
           SLK +R++K+ ++ ++I +L +KV
Sbjct: 133 SLKNIRLRKDNVMMDQIQELSRKV 156

[Close]
BLAST of Cp4.1LG14g04940 vs. NCBI nr
Match: KAG7014908.1 (Agamous-like MADS-box protein AGL21, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 262 bits (669), Expect = 1.04e-86
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE
Sbjct: 72  MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 131

Query: 61  MSLKGVRVKKEKILSEEITQLRQKVYGPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQ 120
           MSLKGVRVKKEKILSEEITQLRQKVYGPMEVDKTSSSTVHQFTFANRY MPAPVHLQLRQ
Sbjct: 132 MSLKGVRVKKEKILSEEITQLRQKVYGPMEVDKTSSSTVHQFTFANRYAMPAPVHLQLRQ 191

Query: 121 PQPQNNETSIPGIKLG 136
           PQPQNNETS+PGIKLG
Sbjct: 192 PQPQNNETSVPGIKLG 207

[Close]
BLAST of Cp4.1LG14g04940 vs. NCBI nr
Match: XP_022984685.1 (MADS-box transcription factor 23-like isoform X4 [Cucurbita maxima])

HSP 1 Score: 253 bits (647), Expect = 5.85e-83
Identity = 140/174 (80.46%), Postives = 140/174 (80.46%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE
Sbjct: 72  MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 131

Query: 61  MSLKGVRVKKEKILSEEITQLRQKV----------------------------------Y 120
           MSLKGVRVKKEKILSEEITQLRQKV                                  Y
Sbjct: 132 MSLKGVRVKKEKILSEEITQLRQKVPPTGNQMHQENLELYKKLDMIRKENAELQMKYQVY 191

Query: 121 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ 140
           GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ
Sbjct: 192 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ 245

[Close]
BLAST of Cp4.1LG14g04940 vs. NCBI nr
Match: XP_023552280.1 (MADS-box transcription factor 23-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253 bits (647), Expect = 5.85e-83
Identity = 140/174 (80.46%), Postives = 140/174 (80.46%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE
Sbjct: 72  MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 131

Query: 61  MSLKGVRVKKEKILSEEITQLRQKV----------------------------------Y 120
           MSLKGVRVKKEKILSEEITQLRQKV                                  Y
Sbjct: 132 MSLKGVRVKKEKILSEEITQLRQKVPPTGNHMHQENLELYKKLDMIRKENAELQTKYQVY 191

Query: 121 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ 140
           GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ
Sbjct: 192 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ 245

[Close]
BLAST of Cp4.1LG14g04940 vs. NCBI nr
Match: XP_022922667.1 (MADS-box transcription factor 23-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 251 bits (640), Expect = 6.79e-82
Identity = 138/174 (79.31%), Postives = 139/174 (79.89%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE
Sbjct: 72  MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 131

Query: 61  MSLKGVRVKKEKILSEEITQLRQKV----------------------------------Y 120
           MSLKGVRVKKEKILSEEITQLRQKV                                  Y
Sbjct: 132 MSLKGVRVKKEKILSEEITQLRQKVPPTGNQMHQENLELYKKLDMIRKENAELQMKYQVY 191

Query: 121 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ 140
           GPMEVDKTSSSTVHQFTFANRY MPAPVHLQLRQPQPQNNETS+PGIKLGLQLQ
Sbjct: 192 GPMEVDKTSSSTVHQFTFANRYAMPAPVHLQLRQPQPQNNETSVPGIKLGLQLQ 245

[Close]
BLAST of Cp4.1LG14g04940 vs. NCBI nr
Match: XP_022984687.1 (MADS-box transcription factor 27-like isoform X6 [Cucurbita maxima])

HSP 1 Score: 247 bits (631), Expect = 1.77e-81
Identity = 136/170 (80.00%), Postives = 136/170 (80.00%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE
Sbjct: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60

Query: 61  MSLKGVRVKKEKILSEEITQLRQKV----------------------------------Y 120
           MSLKGVRVKKEKILSEEITQLRQKV                                  Y
Sbjct: 61  MSLKGVRVKKEKILSEEITQLRQKVPPTGNQMHQENLELYKKLDMIRKENAELQMKYQVY 120

Query: 121 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG 136
           GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG
Sbjct: 121 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG 170

[Close]
BLAST of Cp4.1LG14g04940 vs. ExPASy TrEMBL
Match: A0A6J1J9A2 (MADS-box transcription factor 23-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111482890 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 2.83e-83
Identity = 140/174 (80.46%), Postives = 140/174 (80.46%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE
Sbjct: 72  MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 131

Query: 61  MSLKGVRVKKEKILSEEITQLRQKV----------------------------------Y 120
           MSLKGVRVKKEKILSEEITQLRQKV                                  Y
Sbjct: 132 MSLKGVRVKKEKILSEEITQLRQKVPPTGNQMHQENLELYKKLDMIRKENAELQMKYQVY 191

Query: 121 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ 140
           GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ
Sbjct: 192 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ 245

[Close]
BLAST of Cp4.1LG14g04940 vs. ExPASy TrEMBL
Match: A0A6J1E3Y5 (MADS-box transcription factor 23-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111430602 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 3.29e-82
Identity = 138/174 (79.31%), Postives = 139/174 (79.89%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE
Sbjct: 72  MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 131

Query: 61  MSLKGVRVKKEKILSEEITQLRQKV----------------------------------Y 120
           MSLKGVRVKKEKILSEEITQLRQKV                                  Y
Sbjct: 132 MSLKGVRVKKEKILSEEITQLRQKVPPTGNQMHQENLELYKKLDMIRKENAELQMKYQVY 191

Query: 121 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQLQ 140
           GPMEVDKTSSSTVHQFTFANRY MPAPVHLQLRQPQPQNNETS+PGIKLGLQLQ
Sbjct: 192 GPMEVDKTSSSTVHQFTFANRYAMPAPVHLQLRQPQPQNNETSVPGIKLGLQLQ 245

[Close]
BLAST of Cp4.1LG14g04940 vs. ExPASy TrEMBL
Match: A0A6J1J2V2 (MADS-box transcription factor 27-like isoform X6 OS=Cucurbita maxima OX=3661 GN=LOC111482890 PE=4 SV=1)

HSP 1 Score: 247 bits (631), Expect = 8.58e-82
Identity = 136/170 (80.00%), Postives = 136/170 (80.00%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE
Sbjct: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60

Query: 61  MSLKGVRVKKEKILSEEITQLRQKV----------------------------------Y 120
           MSLKGVRVKKEKILSEEITQLRQKV                                  Y
Sbjct: 61  MSLKGVRVKKEKILSEEITQLRQKVPPTGNQMHQENLELYKKLDMIRKENAELQMKYQVY 120

Query: 121 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG 136
           GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG
Sbjct: 121 GPMEVDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG 170

[Close]
BLAST of Cp4.1LG14g04940 vs. ExPASy TrEMBL
Match: A0A6J1J5Z4 (MADS-box transcription factor 23-like isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111482890 PE=4 SV=1)

HSP 1 Score: 249 bits (637), Expect = 9.10e-82
Identity = 136/164 (82.93%), Postives = 136/164 (82.93%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE
Sbjct: 72  MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 131

Query: 61  MSLKGVRVKKEKILSEEITQLRQK----------------------------VYGPMEVD 120
           MSLKGVRVKKEKILSEEITQLRQK                            VYGPMEVD
Sbjct: 132 MSLKGVRVKKEKILSEEITQLRQKGNQMHQENLELYKKLDMIRKENAELQMKVYGPMEVD 191

Query: 121 KTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG 136
           KTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG
Sbjct: 192 KTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG 235

[Close]
BLAST of Cp4.1LG14g04940 vs. ExPASy TrEMBL
Match: A0A6J1JB90 (MADS-box transcription factor 23-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111482890 PE=4 SV=1)

HSP 1 Score: 249 bits (635), Expect = 1.96e-81
Identity = 136/166 (81.93%), Postives = 136/166 (81.93%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE
Sbjct: 72  MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 131

Query: 61  MSLKGVRVKKEKILSEEITQLRQK------------------------------VYGPME 120
           MSLKGVRVKKEKILSEEITQLRQK                              VYGPME
Sbjct: 132 MSLKGVRVKKEKILSEEITQLRQKGNQMHQENLELYKKLDMIRKENAELQMKYQVYGPME 191

Query: 121 VDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG 136
           VDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG
Sbjct: 192 VDKTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLG 237

[Close]
BLAST of Cp4.1LG14g04940 vs. TAIR 10
Match: AT2G14210.1 (AGAMOUS-like 44 )

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-24
Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 0 

Query: 1   MKEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLE 60
           +KEEQ+QL+N  SE++FW+RE A L+QQL Y+QECHR+L+GEELSG++  DLQNLE QL 
Sbjct: 73  VKEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGMNANDLQNLEDQLV 132

Query: 61  MSLKGVRVKKEKILSEEITQ----------------------------LRQKVYGPMEVD 120
            SLKGVR+KK+++++ EI +                            L++KV+G     
Sbjct: 133 TSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKENIKLQKKVHGRTNAI 192

Query: 121 KTSSSTVHQFTFANRYGMPAPVHLQLRQPQPQNNETSIPGIKLGLQL 140
           + +SS       +N     AP  LQL Q QP   E S   I+LGLQL
Sbjct: 193 EGNSSV---DPISNGTTTYAPPQLQLIQLQPAPREKS---IRLGLQL 233

[Close]
BLAST of Cp4.1LG14g04940 vs. TAIR 10
Match: AT4G37940.1 (AGAMOUS-like 21 )

HSP 1 Score: 102.8 bits (255), Expect = 2.2e-22
Identity = 49/83 (59.04%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 2   KEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLEM 61
           K EQ QL+NP SE++FW+REAA L+Q+LH +QE HRQ+MGE+L+GLSV +L +LE+Q+E+
Sbjct: 73  KIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEI 132

Query: 62  SLKGVRVKKEKILSEEITQLRQK 85
           SL+G+R++KE++L++EI +L QK
Sbjct: 133 SLRGIRMRKEQLLTQEIQELSQK 155

[Close]
BLAST of Cp4.1LG14g04940 vs. TAIR 10
Match: AT2G22630.1 (AGAMOUS-like 17 )

HSP 1 Score: 102.1 bits (253), Expect = 3.8e-22
Identity = 51/83 (61.45%), Postives = 71/83 (85.54%), Query Frame = 0 

Query: 2   KEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLEM 61
           K E+ +LMNP SE++FW+REA  L+Q+LH +QE +RQL G EL+GLSVK+LQN+ESQLEM
Sbjct: 73  KMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEM 132

Query: 62  SLKGVRVKKEKILSEEITQLRQK 85
           SL+G+R+K+E+IL+ EI +L +K
Sbjct: 133 SLRGIRMKREQILTNEIKELTRK 155

[Close]
BLAST of Cp4.1LG14g04940 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 )

HSP 1 Score: 96.3 bits (238), Expect = 2.1e-20
Identity = 51/83 (61.45%), Postives = 69/83 (83.13%), Query Frame = 0 

Query: 2   KEEQNQLMNPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLEM 61
           K E +   +P SE+QFW++EAA LK+QLH +QE HRQ+MGEELSGLSV+ LQNLE+QLE+
Sbjct: 73  KGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLEL 132

Query: 62  SLKGVRVKKEKILSEEITQLRQK 85
           SL+GVR+KK+++L EEI  L ++
Sbjct: 133 SLRGVRMKKDQMLIEEIQVLNRE 155

[Close]
BLAST of Cp4.1LG14g04940 vs. TAIR 10
Match: AT3G57230.2 (AGAMOUS-like 16 )

HSP 1 Score: 61.2 bits (147), Expect = 7.5e-10
Identity = 32/48 (66.67%), Postives = 43/48 (89.58%), Query Frame = 0 

Query: 37  RQLMGEELSGLSVKDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQK 85
           RQ+MGEELSGLSV+ LQNLE+QLE+SL+GVR+KK+++L EEI  L ++
Sbjct: 107 RQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNRE 154

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g04940 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SI381.5e-2343.11MADS-box transcription factor ANR1 OS=Arabidopsis thaliana OX=3702 GN=ANR1 PE=1 ... [more]
Q6EP493.7e-2240.83MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
Q9SZJ63.2e-2159.04Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana OX=3702 GN=AGL21 PE=... [more]
Q388405.4e-2161.45Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana OX=3702 GN=AGL17 PE=... [more]
Q6VAM41.7e-1955.95MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
BLAST of Cp4.1LG14g04940 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014908.11.04e-8698.53Agamous-like MADS-box protein AGL21, partial [Cucurbita argyrosperma subsp. argy... [more]
XP_022984685.15.85e-8380.46MADS-box transcription factor 23-like isoform X4 [Cucurbita maxima][more]
XP_023552280.15.85e-8380.46MADS-box transcription factor 23-like isoform X4 [Cucurbita pepo subsp. pepo][more]
XP_022922667.16.79e-8279.31MADS-box transcription factor 23-like isoform X4 [Cucurbita moschata][more]
XP_022984687.11.77e-8180.00MADS-box transcription factor 27-like isoform X6 [Cucurbita maxima][more]
BLAST of Cp4.1LG14g04940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J9A22.83e-8380.46MADS-box transcription factor 23-like isoform X4 OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1E3Y53.29e-8279.31MADS-box transcription factor 23-like isoform X4 OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1J2V28.58e-8280.00MADS-box transcription factor 27-like isoform X6 OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1J5Z49.10e-8282.93MADS-box transcription factor 23-like isoform X5 OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1JB901.96e-8181.93MADS-box transcription factor 23-like isoform X3 OS=Cucurbita maxima OX=3661 GN=... [more]
BLAST of Cp4.1LG14g04940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G14210.11.1e-2443.11AGAMOUS-like 44 [more]
AT4G37940.12.2e-2259.04AGAMOUS-like 21 [more]
AT2G22630.13.8e-2261.45AGAMOUS-like 17 [more]
AT3G57230.12.1e-2061.45AGAMOUS-like 16 [more]
AT3G57230.27.5e-1066.67AGAMOUS-like 16 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 13..85
e-value: 1.1E-23
score: 83.2
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 15..108
score: 12.856565
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..140
NoneNo IPR availablePANTHERPTHR48019:SF82SUBFAMILY NOT NAMEDcoord: 2..84
coord: 80..140
NoneNo IPR availablePANTHERPTHR48019SERUM RESPONSE FACTOR HOMOLOGcoord: 2..84
coord: 80..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g04940.1Cp4.1LG14g04940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding