Cp4.1LG14g03580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g03580
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ras-related protein RABA1b-like
Location	Cp4.1LG14: 2228867 .. 2231614 (+)
RNA-Seq Expression	Cp4.1LG14g03580
Synteny	Cp4.1LG14g03580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGTCCAGAATAAGCAAACGTGGACCTTCCTTCACAACTTCCCTTTCTTTTATTGATTTCACGCACTTCCTCCCACTTGATTTTGCATTTCATTTATTTTCTCTCTCTCTCGCTCTCTCTGGTTCGATTCTTCTTCTTCTTCCTCGTAAAGTTTGAAGTAAATCGAAGCAACAATGGCGGGTTACAGAGCTGATGATGATTACGACTACCTTTTTAAGGTGGTTCTGATTGGGGATTCCGGCGTCGGCAAGTCCAATTTGCTGTCCAGATTTACTAAGAATGAGTTCAACCTCGAGTCCAAATCCACCATTGGTGTAGAGTTCGCCACCAGGACCTTGAACGTCGATAGTAAAGTTATTAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTTTTGTTTCTTCTCTCATCTTGATTTATCTTCGTTTCTTGCTATCTCCTTGGTTTTCCTTCCTTTGATTTCTGTCTGAGTTGTTTCTTCGCGCTTTGGATTATTGTTGCTGCTTACTGTTTTCTGTGTTGGTTGAGTGTTCTGGTTTCTGAGTTTGGTTAATTAGCATGTTCTGGTTCGCCGAGCGGGTTGTAATAACCTAGATCTGTTTGATGGGAGGTGTTTTCTTATCAATCTTGTGTTCTTATGGTTCAATCGAGTGTTTTAATGCTCTCGAAGTTGGTTCTGATGTCTTCTTACTGCGATTTGTTGCGGCTTTGTTCTTCAACTTTCATGGTTGGAAGGGTAATAACGCTGGTTGATGATGGTTAAAAAAGCTTAGATTCAGAAGGCACTGAAGAATTCATTGATTAGATGTTAGTGAAGTAGTGTGCTCCTCTGAGCCATTTCATTTTTAAATATCTTCTAATTTGAATTAGCAACAGAAAGTTTTGATTCTTCCAATTATTCTTTCCCCTGTCTCCCGAGAAAGTATAAAGGTATCTGGCTTCCTTCTACAGGAATTCGTCTCCTGTTTTCCATGGGGGATATGTTGAAATTCTCTTTCATGCATTGTAGCTCTTCGACCTTTTGATTTGTTTCTCAAAATATCTCCTGGAGAAAAAAAAAAATCATTTCAATGAAGTTTCTATTCTGGGTTAGCAGGGTCATTGAACACAATAATGCCATTGATTTCCTGTTTTAAGAGAAGCTCAAACTGACGCTATAATGACTTAGAAGTAGTTTAGAGTCTCTTTCTAACAAGAGAAACTATGCCATCTGCTGGATCTCGTTGTATGTGAAACTTTTGTGTAATAGTCCAAGCCCGTTACGTATTGCCGTTAGCCTCACGGTTTCAAAATGTGTCTGCTAGGGAGAATTTTCCATAGGAATGCTTCGCTCCCCTCTCCAACCGATGGGATCTTGAGCTGTTACATTTTTCTCATAGTTTCTTGGGCTTACTATTCTCACTCGAACTCACTCGATGACACCATGGTACAACCTATAGAACAGATCTTATTCTAGTTAGGTCGTCGCTCCTAATCACTTTGTTATGAACTTTTATTGGTTTTGTCTAATTAGCCCAAGCTCTCATAAAAACTGAAGCTTCTATGATGGATTGCCTAGAAGATATAAAGGTGCCACTGACCCCTTCCACAAAATAAGCATCTGACAAAGGAAATGAAATGATCTGCAATTCTTGATGTGTTTTCTAACTTTCGATTAACTATGATTTTACCATTTGTTTTTGTTATACCTTTAATGATGCTCATGAATGTTGATTAGTAGATCGCAAAATTCTTTTCTAATAGTTAAGAAGATGGCTTCATCATTCATCAATAAGAGTCTGGTAGACTGATTGTGCGATCTAGTTTACAATCTCTCAAGTTTTCTTTAAATTGAATGAGCTATTCAGATCTTACATGGGTTCTGTGTCTATAGGTACCGTGCCATCACCAGTGCCTACTACCGTGGAGCAGTTGGTGCACTCCTCGTATACGATGTCACTCGTCATGCGACATTCGAGAACGTCGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATCGTTGTGATGCTTGTTGGAAACAAATCCGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAGTCGTACGCCGAGAAGGAATCACTATATTTCATAGAAACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCTGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCGGTTGAAGGCGGAGAAAATGGCTCTGCTACCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCGGTAATCTGCCTAGATGATTTTCGATTTCATGTAATGTAATATATTCTTTCCTTGAAGATGGTTATGAAGAAAAAGGAAGATATATATATATATCCCCAAGACGTTCAATCTTGCTGCATTACAGAAAGAGGAGTGTACCTTAGCCACATGATTGGTTCGTGGTTGCTGTTGTGTCATTATTAGCATCTTGGTTTCAAGTTTCTATGGCAAATGTCCACCATTTTAGCCTCTACTACTACCCCTTTGATCTGTATAAGCATTCATGGATGTCCTACGATGATAATGATGTTGATGAACCCTCATATTCATTCATATGTTGTTTAAGTCGGTTATGATGGCTCTTTGAGCTGTGAACTTCATATTTGTAACACTTATATTACTTTTTAGCCTGCCTATTTCGGGAAAAAAAATTATCATTTTGGTCCCTTTACTCT

mRNA sequence

AGGTCCAGAATAAGCAAACGTGGACCTTCCTTCACAACTTCCCTTTCTTTTATTGATTTCACGCACTTCCTCCCACTTGATTTTGCATTTCATTTATTTTCTCTCTCTCTCGCTCTCTCTGGTTCGATTCTTCTTCTTCTTCCTCGTAAAGTTTGAAGTAAATCGAAGCAACAATGGCGGGTTACAGAGCTGATGATGATTACGACTACCTTTTTAAGGTGGTTCTGATTGGGGATTCCGGCGTCGGCAAGTCCAATTTGCTGTCCAGATTTACTAAGAATGAGTTCAACCTCGAGTCCAAATCCACCATTGGTGTAGAGTTCGCCACCAGGACCTTGAACGTCGATAGTAAAGTTATTAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGTGCCATCACCAGTGCCTACTACCGTGGAGCAGTTGGTGCACTCCTCGTATACGATGTCACTCGTCATGCGACATTCGAGAACGTCGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATCGTTGTGATGCTTGTTGGAAACAAATCCGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAGTCGTACGCCGAGAAGGAATCACTATATTTCATAGAAACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCTGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCGGTTGAAGGCGGAGAAAATGGCTCTGCTACCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCGGTAATCTGCCTAGATGATTTTCGATTTCATGTAATGTAATATATTCTTTCCTTGAAGATGGTTATGAAGAAAAAGGAAGATATATATATATATCCCCAAGACGTTCAATCTTGCTGCATTACAGAAAGAGGAGTGTACCTTAGCCACATGATTGGTTCGTGGTTGCTGTTGTGTCATTATTAGCATCTTGGTTTCAAGTTTCTATGGCAAATGTCCACCATTTTAGCCTCTACTACTACCCCTTTGATCTGTATAAGCATTCATGGATGTCCTACGATGATAATGATGTTGATGAACCCTCATATTCATTCATATGTTGTTTAAGTCGGTTATGATGGCTCTTTGAGCTGTGAACTTCATATTTGTAACACTTATATTACTTTTTAGCCTGCCTATTTCGGGAAAAAAAATTATCATTTTGGTCCCTTTACTCT

Coding sequence (CDS)

ATGGCGGGTTACAGAGCTGATGATGATTACGACTACCTTTTTAAGGTGGTTCTGATTGGGGATTCCGGCGTCGGCAAGTCCAATTTGCTGTCCAGATTTACTAAGAATGAGTTCAACCTCGAGTCCAAATCCACCATTGGTGTAGAGTTCGCCACCAGGACCTTGAACGTCGATAGTAAAGTTATTAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGTGCCATCACCAGTGCCTACTACCGTGGAGCAGTTGGTGCACTCCTCGTATACGATGTCACTCGTCATGCGACATTCGAGAACGTCGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATCGTTGTGATGCTTGTTGGAAACAAATCCGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAGTCGTACGCCGAGAAGGAATCACTATATTTCATAGAAACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCTGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCGGTTGAAGGCGGAGAAAATGGCTCTGCTACCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAA

Protein sequence

MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS

Homology

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BLAST of Cp4.1LG14g03580 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.1e-97
Identity = 176/218 (80.73%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           M GYR DD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+TLNVD+K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFEN  RWLKEL++HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVPTEDGKS+AE+ESLYF+ETSALEA NVE AF EVLTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESG-LNRIKCCSS 218
           +AVE G++GS++ +P++G+ IN+K++S  L R  CCS+
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218

[Close]

BLAST of Cp4.1LG14g03580 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.9e-97
Identity = 186/218 (85.32%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIK-DESGLNRIKCCSS 218
           K VE GE+G+A SVP +GEKI +K D S L ++ CCS+
Sbjct: 181 KQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Cp4.1LG14g03580 vs. ExPASy Swiss-Prot
Match: Q9FK68 (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.1e-95
Identity = 179/218 (82.11%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+ WLKEL+NHTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AEKESLYF+ETSALEA NVE AFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINI-KDESGLNRIKCCSS 218
           KA+E      + +VP++G+KI+I KD S + +  CCS+
Sbjct: 181 KAMEAA--SESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Cp4.1LG14g03580 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.1e-95
Identity = 174/218 (79.82%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++LN+D+K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENV RWLKEL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAV T++ K  AE+E LYF+ETSALEA NVE AF E LTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDE-SGLNRIKCCSS 218
           KAVE G+ G+ +S P +GE INIKDE S   +  CCSS
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218

[Close]

BLAST of Cp4.1LG14g03580 vs. ExPASy Swiss-Prot
Match: Q9SN35 (Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 8.7e-95
Identity = 175/217 (80.65%), Postives = 199/217 (91.71%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+RWL+EL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 218
           KA+E GE+    +VP++GEKI++ D S + +  CCS+
Sbjct: 181 KAMEAGEDSG--NVPSKGEKIDV-DVSAVKKTGCCSN 214

[Close]

BLAST of Cp4.1LG14g03580 vs. NCBI nr
Match: XP_023552145.1 (ras-related protein Rab11D-like [Cucurbita pepo subsp. pepo] >KAG6577033.1 Ras-related protein Rab11D, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015054.1 Ras-related protein Rab11D [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 429 bits (1102), Expect = 2.48e-151
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cp4.1LG14g03580 vs. NCBI nr
Match: XP_022984337.1 (ras-related protein RABA1b-like [Cucurbita maxima])

HSP 1 Score: 426 bits (1096), Expect = 2.04e-150
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cp4.1LG14g03580 vs. NCBI nr
Match: XP_022142868.1 (ras-related protein Rab11D-like [Momordica charantia])

HSP 1 Score: 426 bits (1095), Expect = 2.89e-150
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSA+SVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cp4.1LG14g03580 vs. NCBI nr
Match: XP_022982677.1 (ras-related protein RABA1b-like [Cucurbita maxima] >XP_023516511.1 ras-related protein RABA1b-like [Cucurbita pepo subsp. pepo] >XP_038877813.1 ras-related protein RABA1b-like [Benincasa hispida] >KAG6600502.1 Ras-related protein Rab11D, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031142.1 Ras-related protein Rab11D [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424 bits (1091), Expect = 1.18e-149
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSA+SVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cp4.1LG14g03580 vs. NCBI nr
Match: XP_022931489.1 (ras-related protein Rab11D-like [Cucurbita moschata])

HSP 1 Score: 424 bits (1091), Expect = 1.18e-149
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSA SVPAQGEKINIKDESGL RIKCCSS
Sbjct: 181 KAVEGGENGSAASVPAQGEKINIKDESGLTRIKCCSS 217

[Close]

BLAST of Cp4.1LG14g03580 vs. ExPASy TrEMBL
Match: A0A6J1J1X3 (ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111482671 PE=4 SV=1)

HSP 1 Score: 426 bits (1096), Expect = 9.86e-151
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cp4.1LG14g03580 vs. ExPASy TrEMBL
Match: A0A6J1CPC3 (ras-related protein Rab11D-like OS=Momordica charantia OX=3673 GN=LOC111012877 PE=4 SV=1)

HSP 1 Score: 426 bits (1095), Expect = 1.40e-150
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSA+SVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cp4.1LG14g03580 vs. ExPASy TrEMBL
Match: A0A6J1IX83 (ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111481478 PE=4 SV=1)

HSP 1 Score: 424 bits (1091), Expect = 5.71e-150
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSA+SVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cp4.1LG14g03580 vs. ExPASy TrEMBL
Match: A0A6J1EUD9 (ras-related protein Rab11D-like OS=Cucurbita moschata OX=3662 GN=LOC111437652 PE=4 SV=1)

HSP 1 Score: 424 bits (1091), Expect = 5.71e-150
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSA SVPAQGEKINIKDESGL RIKCCSS
Sbjct: 181 KAVEGGENGSAASVPAQGEKINIKDESGLTRIKCCSS 217

[Close]

BLAST of Cp4.1LG14g03580 vs. ExPASy TrEMBL
Match: A0A0A0KXK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082460 PE=4 SV=1)

HSP 1 Score: 423 bits (1088), Expect = 1.64e-149
Identity = 213/217 (98.16%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 217
           KAVEGGENGSA++VPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Cp4.1LG14g03580 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-98
Identity = 186/218 (85.32%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD K
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIK-DESGLNRIKCCSS 218
           K VE GE+G+A SVP +GEKI +K D S L ++ CCS+
Sbjct: 181 KQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Cp4.1LG14g03580 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 348.6 bits (893), Expect = 3.6e-96
Identity = 179/218 (82.11%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+ WLKEL+NHTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AEKESLYF+ETSALEA NVE AFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINI-KDESGLNRIKCCSS 218
           KA+E      + +VP++G+KI+I KD S + +  CCS+
Sbjct: 181 KAMEAA--SESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Cp4.1LG14g03580 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 347.8 bits (891), Expect = 6.2e-96
Identity = 175/217 (80.65%), Postives = 199/217 (91.71%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+RWL+EL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIKDESGLNRIKCCSS 218
           KA+E GE+    +VP++GEKI++ D S + +  CCS+
Sbjct: 181 KAMEAGEDSG--NVPSKGEKIDV-DVSAVKKTGCCSN 214

[Close]

BLAST of Cp4.1LG14g03580 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 332.4 bits (851), Expect = 2.7e-91
Identity = 166/218 (76.15%), Postives = 192/218 (88.07%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MAGYRAD++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+T  V+ K
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRHATFEN  RWL+EL+ HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNK DLRHLVAV TE+ K++AE+ESLYF+ETSAL+A NVE AF EVLTQI+ IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 KAVEGGENGSATSVPAQGEKINIK-DESGLNRIKCCSS 218
           ++V+GG  G +  +P +GE IN+K D S L R+ CCS+
Sbjct: 181 RSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of Cp4.1LG14g03580 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 317.8 bits (813), Expect = 6.9e-87
Identity = 158/220 (71.82%), Postives = 195/220 (88.64%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
           MA YRADDDYD+L+KVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++VD K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKEL++HT++NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           +MLVGNK+DLRHL AV TED K++AE+E+ +F+ETSALEA+NVE AF EVL+QIY + SK
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KAVEGGENGSATSVPAQGEKINI---KDESGLNRIKCCSS 218
           KA++ G++   T++P +G+ IN+    D S + ++ CCSS
Sbjct: 181 KALDIGDD--HTTLP-KGQSINVGSKDDVSEVKKVGCCSS 217

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g03580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40194	1.1e-97	80.73	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q39222	1.9e-97	85.32	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]
Q9FK68	5.1e-95	82.11	Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1	[more]
Q01111	5.1e-95	79.82	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
Q9SN35	8.7e-95	80.65	Ras-related protein RABA1d OS=Arabidopsis thaliana OX=3702 GN=RABA1D PE=1 SV=1	[more]

BLAST of Cp4.1LG14g03580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552145.1	2.48e-151	100.00	ras-related protein Rab11D-like [Cucurbita pepo subsp. pepo] >KAG6577033.1 Ras-r...	[more]
XP_022984337.1	2.04e-150	99.54	ras-related protein RABA1b-like [Cucurbita maxima]	[more]
XP_022142868.1	2.89e-150	99.08	ras-related protein Rab11D-like [Momordica charantia]	[more]
XP_022982677.1	1.18e-149	98.62	ras-related protein RABA1b-like [Cucurbita maxima] >XP_023516511.1 ras-related p...	[more]
XP_022931489.1	1.18e-149	99.08	ras-related protein Rab11D-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG14g03580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J1X3	9.86e-151	99.54	ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111482671 PE=4...	[more]
A0A6J1CPC3	1.40e-150	99.08	ras-related protein Rab11D-like OS=Momordica charantia OX=3673 GN=LOC111012877 P...	[more]
A0A6J1IX83	5.71e-150	98.62	ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111481478 PE=4...	[more]
A0A6J1EUD9	5.71e-150	99.08	ras-related protein Rab11D-like OS=Cucurbita moschata OX=3662 GN=LOC111437652 PE...	[more]
A0A0A0KXK6	1.64e-149	98.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082460 PE=4 SV=1	[more]

BLAST of Cp4.1LG14g03580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16920.1	1.3e-98	85.32	RAB GTPase homolog A1B	[more]
AT5G45750.1	3.6e-96	82.11	RAB GTPase homolog A1C	[more]
AT4G18800.1	6.2e-96	80.65	RAB GTPase homolog A1D	[more]
AT1G06400.1	2.7e-91	76.15	Ras-related small GTP-binding family protein	[more]
AT3G15060.1	6.9e-87	71.82	RAB GTPase homolog A1G	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 55.22 coord: 117..130 score: 53.64 coord: 37..53 score: 36.7 coord: 152..174 score: 41.61 coord: 55..77 score: 52.53
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 e-value: 1.3E-6 score: 37.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 1.6E-107 score: 373.2
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 8.1E-26 score: 101.8
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..217
None	No IPR available	PANTHER	PTHR24073:SF1156	RAS-RELATED PROTEIN RABA1B	coord: 1..217
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..175 score: 9.664
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..215 score: 35.4673
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 1.88252E-126 score: 352.248
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 4.0E-12 score: 35.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 2.3E-61 score: 206.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..217 score: 16.092306
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 3.9E-39 score: 132.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..215 e-value: 4.0E-71 score: 240.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g03580.1	Cp4.1LG14g03580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0060627	regulation of vesicle-mediated transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding