Cp4.1LG14g03570 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g03570
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein VTE6, chloroplastic-like
Location	Cp4.1LG14: 2177631 .. 2181735 (+)
RNA-Seq Expression	Cp4.1LG14g03570
Synteny	Cp4.1LG14g03570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAGATCCCTTAGTTTTACTTCCACTGGTCACCACTGATCCAGGTCGCAACAATGGAGGAGAAGAAATTGTTCCATTTTTATTCATAAATTCCAAAAATCAAATTTGAGCTCAGAATTTGTTCTTCCTTGACCAAGACACTGCAGAAGATTCCTTCCTCAGATTCTTCGGTATTTAATGGCCACGGCGTTGCTGCCCTCAACTCATCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCTCCCAAACTCCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTATTTCCCAAATCGAACCCTAACCGATCCCTCAAGACGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGTTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAGTCGGCCTTACTCACTAACCTGCTGATTTTCGTCGCGGGTTCGCCGATTCTGGCCTCGGGGTTGTCTGTTTCGGGCATTGCTTCGGCTTTCTTGCTTGGTACTCTCACATGGCGTGCTTTTGGACCCTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGTTCGTCTATGATCCTTTCTCCTGAAATTTCATTTGAGTTTTGTGTTTGCTTAGTTGATTGATTGGTGGGATTTCGTTGTTCTCTAGGTTTTTTCTGGATTGAATTGGCTGTTTTATTGATTGATTGCTGTTCTTCATTGTTCTTCATTGTTGTTGTGATTGAATAATTCTAGTATGCTGCACCTATCTGTTTAGATGATCAATTAAAGACAAATGGTGTTAAATCATAGGGGGTTTGGATTGTTTCTACTTCATAATTGCTTCAGATTATTGTTATGGAATACTTAGATTGTTTTACAGACGTGAATTGATTCTGAAAGTACTGGATGCACAGCTCTGAGGTTCATTGTCAAGTTGAAGACTGACTGTTACTTCTCTTAAAATTTTCACCTTTCTTCAAAGGGCTTGGTTGGGGAGGAGAACGTAGCATTCTTTATAAGGGTGTGGAAACTTCTTCCTACCATACGCGTTTTAGAAACCGTGAGGGAAAGCCTAAAAGGGAAAGGCTAAAGAGGACAATATCTACTAGGTGGACTTGAGCTGTTACAAATGGTATTAGAACTAGACACTGGGCGATGTGCCAGCGAGAGGCTGAGCCCCGAATAAGGGTGGACATGAGGTGGTGTGCCAATAAGGACGTTGGAACTCGAAGGGGGGTGAATTGGGGAGTCCCACATCAATTGGAGAAGGAAACGAGTGCCAACGAGGACGTTGGGTCCTGAAAGGGGGTGGATTGTGAGATTTTTCACATTGGTTGGGGAGGAGAATGAAGTACTCTTTATAAGGTGTGGAAACCTCTCCCTAGCAGATGTGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCTGAAGAGGCCAATATCTGCTGGCAGTGGACTTAAGCTGTTACAAATGGTATTAGAGCCAGACACGGGGCGATGTGTCAGTGAGGAGACTGAACCCCGAAGGAAGTGGACACGAGGCGGTGTGTTAGCAAGGACGCTGGCCCCGAAGGGGCTGGACTGGAGGGTCCCACATCGATTGAAGAAGGGAACGAGTGCTAGCGAGGACGCTGGGCCCCGAAGAGGGGTGGATTGTGAGATCCCATGTCGGTTGGAAAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGGAGATGCGTTTTAAAAACCTTGAGGAGAAGCCCGAAAGGGAAAGGCCGAAGAGGACAACTGCTAGCGGTGGGTTTGAGCCGCGTTACAAATGAACTATCAACATTTTCTTAATCTTGTTTGCTCTTTACATTTATTTCGGTGACTGGAAGCTACAGAACTGCCTCTTTCAGCAACGCTAATAGCCCTCCTGCTGAAATTCTATTTCCCAGGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGAAAAGGAAGAAGAGGACTTGGAAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTCATGATAAACAACATTGGAGGAGAATCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCAGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCATATGGTCGGATAACGTAAGTAATCCATTCCTGCTCGATCTTGATCAAGCACATATTTTATCTTCTAATCATCATATTTCTCGAGTTCGTAGTTTTCAGGAGAATTTTCAAACAATATTGATACGAATAAGGTGTCTTAATCATTCACGTTATTGTCTTGATTAAGCTATCTTGTGGAATGATTCGAATCATGAGTTTAGAAACGAGGTTTCTTTACTCTTGATCTTGATCATCAAGGTAATCCGTTCCAAAACTTTCACTTGGGTTGATTCCTTGTCGTTTTTTGAGTTCTTGGATAATTTAGATCAAGAGATCTCGTTCTTTAACAAAGTTTTTAGATCGAATCCCAGGAGTTTCATAAGTATAGTTTATGTTTTTCAATTCCTCGGATGAACATGTTATGTGTTTCACTGATTCACTGATGATTCATTTCAAATCAGGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTATCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGACGTAATTATTTCAATCCTTTCCTACTCGTTTCGTATTGCTCGTTCTTTAACAAGGTTTTTAGATCAAATCTCCATCGACGTTGATGCAGATAACTGCATCTGAAGCAATTGTATGCGTCGTAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATTGGTGCTGTTCTTCAAGAGAAGGAGGGATTTCAGTGGGTAAGTAACTGAAGTTTGTGATCTCTGATTGTCTTAGTCTGATTATGTTGTTTGTTCATGAGTTGAACTGTTCTTCTGTTATTGCCTGCTATCATGTAATGTTGGCTCGAGTGACTCAGCTGAAGGGTCTTGATTGAGCAACTGCTCATTGGTACGAGGTCTTTTAGGCAAAGTCATGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTAGGGAAGTTCGTGGTTTCTAAAATGGTATCAGAGTCATACCCTTAACTTAGCCATGACTATAGAATCCTCAAGTGTCGAATAAAAAAATTGAGTCTCGAAGGTGTAGCCAAAGGTGACTTAAGGGTAGAAAAAAGTGTACTTTGTTCGAGGGCTCCAGAGAAGAAGTCGAGTCTCGACTAAGGGGAGGCTGTTCGAGGGCTCCATAGGCCTCAGGGAGGCTATATAGTGTACTTTGTTCGAGGGGAGGATTGTTGAGAGAGGAGTCTTGGAAGATCATAGATTTATGAGTAAGGAATACTATCTTTATTGGTACGAGACCTTTTGGGAAAACCAAAAGCAAAACCACGAGTGCTTATGTTTAAAGTGGACAATATTATACGATTACGGAGGTTCGTGTTTACTAACAGAAACTCCTTCCCCTCCCTTCTCGGTTGATATGTTTCCGGTTTCCATTATGTTCTGGTCGTACGTCTTTGATCTGATTCTTTCTTATTCTATTTGCAGCTCAACAATGATGTAGTTAATGTCATCAACATATCCATGGGCAGCATTTTAGCTATCTTGATGCAGCAACTCATACTCGGTCACTGACACATTCATACTCGGATGGAGCTCTCTCACCTTCTCAAGTGATCAGGTGGTGTTCTCCCTTATAGAAAGCTGCAATGGATGGATGGACGAGACGACCGAAGCCTTCCCCCGGAATCGTTTCGACGAATTGCTTCGATTAAATTCTTGCTTTGAGAATGGACGCTGGTATTCAGCAGCAGTGAGCAAAATGCAAGTACAGGTTCTTAAAATGAGGACTGCAGATTCAATGCTTTGACCTCTAATATCACACTTTGTAGTTAATTATCTCTTTTTCTTTTAAGGGGAGAATCATACGTAAATATATTTCGTAGGGAATCGAATAGGTGCACCACTTTCGATTTTATATTAAATAAGTTCTTAAACTTTTAATTACGTGTCTAA

mRNA sequence

TAGAGATCCCTTAGTTTTACTTCCACTGGTCACCACTGATCCAGGTCGCAACAATGGAGGAGAAGAAATTGTTCCATTTTTATTCATAAATTCCAAAAATCAAATTTGAGCTCAGAATTTGTTCTTCCTTGACCAAGACACTGCAGAAGATTCCTTCCTCAGATTCTTCGGTATTTAATGGCCACGGCGTTGCTGCCCTCAACTCATCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCTCCCAAACTCCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTATTTCCCAAATCGAACCCTAACCGATCCCTCAAGACGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGTTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAGTCGGCCTTACTCACTAACCTGCTGATTTTCGTCGCGGGTTCGCCGATTCTGGCCTCGGGGTTGTCTGTTTCGGGCATTGCTTCGGCTTTCTTGCTTGGTACTCTCACATGGCGTGCTTTTGGACCCTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGAAAAGGAAGAAGAGGACTTGGAAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTCATGATAAACAACATTGGAGGAGAATCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCAGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCATATGGTCGGATAACGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTATCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGACATAACTGCATCTGAAGCAATTGTATGCGTCGTAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATTGGTGCTGTTCTTCAAGAGAAGGAGGGATTTCAGTGGCTCAACAATGATGTAGTTAATGTCATCAACATATCCATGGGCAGCATTTTAGCTATCTTGATGCAGCAACTCATACTCGGTCACTGACACATTCATACTCGGATGGAGCTCTCTCACCTTCTCAAGTGATCAGGTGGTGTTCTCCCTTATAGAAAGCTGCAATGGATGGATGGACGAGACGACCGAAGCCTTCCCCCGGAATCGTTTCGACGAATTGCTTCGATTAAATTCTTGCTTTGAGAATGGACGCTGGTATTCAGCAGCAGTGAGCAAAATGCAAGTACAGGTTCTTAAAATGAGGACTGCAGATTCAATGCTTTGACCTCTAATATCACACTTTGTAGTTAATTATCTCTTTTTCTTTTAAGGGGAGAATCATACGTAAATATATTTCGTAGGGAATCGAATAGGTGCACCACTTTCGATTTTATATTAAATAAGTTCTTAAACTTTTAATTACGTGTCTAA

Coding sequence (CDS)

ATGGCCACGGCGTTGCTGCCCTCAACTCATCCTTTTCCCCTTCGTTTTTCTCCCACTCCCTCTCCCAAACTCCGCCAATTTTCCTCTCTTCCTCTCCCTCCAAAACCCTTATTTCCCAAATCGAACCCTAACCGATCCCTCAAGACGGTGGTTCGAGCCGAGAGCTTGCAGAGCCTTGTATCGGTTGCTGTGAACATCGTCCAATCGAATCCCCCCACGTGGCAGTCGGCCTTACTCACTAACCTGCTGATTTTCGTCGCGGGTTCGCCGATTCTGGCCTCGGGGTTGTCTGTTTCGGGCATTGCTTCGGCTTTCTTGCTTGGTACTCTCACATGGCGTGCTTTTGGACCCTCTGGTTTCCTTCTTGTTGCTACCTACTTCGTCATTGGAACAGCTGCAACAAAGGTCAAGATGGCTCAAAAGGAAGCACAAGGGGTAGCTGAAAAGAGAAAAGGAAGAAGAGGACTTGGAAGTGTTATAGGATCCAGTGCTGCTGGTTGTGTGTGTGCTTTGCTCATGATAAACAACATTGGAGGAGAATCATTCCGACAACTTTGGCGACTTGGTTTTGTTGCCAGTTTCTGTACTAAATTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCATATGGTCGGATAACGTACCTGGTGACAACATTTAGGATAGTTCCTCGGGGAACAGAAGGGGCTATCAGTCTGGAGGGAACCTTTGCTGGACTCTTAGCAGCAAGTGTTCTTGCATTTGTTGGCTGTCTTTTGGGCGACATAACTGCATCTGAAGCAATTGTATGCGTCGTAGCTTCACAGATTGCTAATCTTGGTGAAAGCATCATTGGTGCTGTTCTTCAAGAGAAGGAGGGATTTCAGTGGCTCAACAATGATGTAGTTAATGTCATCAACATATCCATGGGCAGCATTTTAGCTATCTTGATGCAGCAACTCATACTCGGTCACTGA

Protein sequence

MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRAESLQSLVSVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGESFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGLLAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMGSILAILMQQLILGH

Homology

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BLAST of Cp4.1LG14g03570 vs. ExPASy Swiss-Prot
Match: Q9SYM0 (Protein VTE6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VTE6 PE=1 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.5e-103
Identity = 214/323 (66.25%), Postives = 251/323 (77.71%), Query Frame = 0


Query: 2   ATALLPSTH-PFPLRF-------SPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRA 61
           +T LL S+    PLRF       S +P  +  +F    L P      S+ +R+      A
Sbjct: 6   STLLLNSSRSALPLRFPKFSGFSSSSPFARSYRFGRRNLEPLSNGMLSSGSRADGATAAA 65

Query: 62  ESLQSLVSVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWR 121
            S++ +++ A+ ++QS  PTW+SA+  NLLIFV GSP+L +GLS SGIA+AFLLGTLTWR
Sbjct: 66  ASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWR 125

Query: 122 AFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLM 181
           A+G +GFLLVA YFVIGTAATKVKM QKEAQGVAEKRKGRRG  SVIGSSAAGCVCA L 
Sbjct: 126 AYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLS 185

Query: 182 INNIGGESFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISL 241
           I  +GG +F QL+RLGFV+SFCTK+SDTVSSEIGKAYG+ TYL TTF+IVPRGTEGA+SL
Sbjct: 186 IYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSL 245

Query: 242 EGTFAGLLAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNN 301
           EGT AGLLA+  LA VGC LG IT  EA VCV+ASQIANLGESIIGA  Q+KEGF+WLNN
Sbjct: 246 EGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLNN 305

Query: 302 DVVNVINISMGSILAILMQQLIL 317
           DVVNVINIS+GSI+AILMQQ IL
Sbjct: 306 DVVNVINISLGSIVAILMQQFIL 328

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BLAST of Cp4.1LG14g03570 vs. ExPASy Swiss-Prot
Match: P73555 (Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0875 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.7e-43
Identity = 108/237 (45.57%), Postives = 150/237 (63.29%), Query Frame = 0


Query: 74  WQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAA 133
           W SA++ N  +    +      L+  G   A++LG + W A G  G+L+V  YF +G+A 
Sbjct: 18  WLSAVILNSFLLALAAIAPKKLLTPWGYGHAWVLGVIIWAALGWRGYLVVLAYFFVGSAV 77

Query: 134 TKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGESFRQLW-RLGFVA 193
           T++   +KEA G+AEKR G+RG  +V GS+    +CAL +    G E + QLW  LG+VA
Sbjct: 78  TRIGQKEKEAAGIAEKRSGQRGPENVWGSALTAALCALAIA--FGPEPW-QLWLALGYVA 137

Query: 194 SFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGLLAASVLAFVGCL 253
           SF TKLSDT +SE+GKAYG+ T+L+TT + VPRGTEGA+S+EGT AG  A   LA +G  
Sbjct: 138 SFSTKLSDTTASEVGKAYGKNTFLITTLQPVPRGTEGAVSVEGTLAGFAAGLALAVLGYG 197

Query: 254 LGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMGSILAI 310
           +G I+    I   +A+ IA   ES+IGA LQ K  + WL N+VVN IN  +G+ +AI
Sbjct: 198 VGLISFGGIIFSTLAAFIATNLESVIGATLQNK--WPWLTNEVVNGINTFLGAAIAI 249

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BLAST of Cp4.1LG14g03570 vs. ExPASy Swiss-Prot
Match: Q58343 (Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0933 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-16
Identity = 72/219 (32.88%), Postives = 122/219 (55.71%), Query Frame = 0


Query: 96  LSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRG 155
           L   G+  + ++G +     G    +L+ ++F++G   ++V + +K+A+ + E     R 
Sbjct: 32  LDNEGVIGSSIMGFILLYFCGFKYLILLLSFFILGVLVSRVGLEKKKAKKMDET---CRS 91

Query: 156 LGSVIGSSAAGCVCALLMINNIGGESFRQLWRL-GFVASFCTKLSDTVSSEIGKAYGRIT 215
           L +V+ +     + A+L I       F   W L G+++S     SDT SSE+G       
Sbjct: 92  LKNVLANGLIPILFAILAI-------FGFNWALIGYISSIAAATSDTFSSELGILSNEKP 151

Query: 216 YLVTTFRIVPRGTEGAISLEGTFAGLLAASVLAFVGCLL-GDITASEAIVCVVASQIA-N 275
            L+TTF +V +GT+GAI++ GT AG+L A ++   G LL GDI   + ++C  A  IA N
Sbjct: 152 RLITTFEVVEKGTDGAITIFGTLAGVLGAFLIGLFGYLLFGDI---KIVLCGTAGGIAGN 211

Query: 276 LGESIIGAVLQEKEGFQWLNNDVVNVINISMGSILAILM 312
           L +S++GA L E++G   LNN+ VN+I   +G I+ +L+
Sbjct: 212 LADSLVGA-LFERKGI--LNNEHVNLIATIVGGIIGVLI 234

[Close]

BLAST of Cp4.1LG14g03570 vs. ExPASy Swiss-Prot
Match: Q0WP96 (Protein PGR OS=Arabidopsis thaliana OX=3702 GN=PGR PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.7e-04
Identity = 60/221 (27.15%), Postives = 95/221 (42.99%), Query Frame = 0


Query: 96  LSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRG 155
           L +SG  + FL+ T+ + A    G LL+  +F+  +  TKV   +K    V  K  G+R 
Sbjct: 29  LDLSGGIAGFLVMTIHFTAGFRYGALLL-VFFLTSSKLTKVGEDKKRRVDVEFKEGGQRN 88

Query: 156 LGSVIGSSAAGCVCALLMINNIG-------GESFRQLWRL--GFVASFCTKLSDTVSSEI 215
              V+ +S    V  ++     G        +    +  L  G +  +     DT SSE+
Sbjct: 89  WVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGDTWSSEL 148

Query: 216 GKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGLLAASVLAFVGCLLGDITASEAI---- 275
           G        L+TTF+ V +GT G ++  G  A L A + +     + G  TAS A     
Sbjct: 149 GVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCASDVAL 208

Query: 276 -------VCVVASQIANLGESIIGAVLQEKEGFQWLNNDVV 297
                  +  +A    +L +SI+GA +Q   GF  + N VV
Sbjct: 209 KQLLVIPLSALAGLCGSLIDSILGATIQ-FSGFCSVRNKVV 247

[Close]

BLAST of Cp4.1LG14g03570 vs. NCBI nr
Match: XP_023553437.1 (protein VTE6, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 596 bits (1537), Expect = 2.93e-214
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRAESLQSLV 60
           MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRAESLQSLV
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRAESLQSLV 60

Query: 61  SVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSGF 120
           SVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSGF
Sbjct: 61  SVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSGF 120

Query: 121 LLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGE 180
           LLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGE
Sbjct: 121 LLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGE 180

Query: 181 SFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGL 240
           SFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGL
Sbjct: 181 SFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGL 240

Query: 241 LAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVIN 300
           LAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVIN
Sbjct: 241 LAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVIN 300

Query: 301 ISMGSILAILMQQLILGH 318
           ISMGSILAILMQQLILGH
Sbjct: 301 ISMGSILAILMQQLILGH 318

[Close]

BLAST of Cp4.1LG14g03570 vs. NCBI nr
Match: XP_022984475.1 (protein VTE6, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 577 bits (1487), Expect = 1.22e-206
Identity = 307/318 (96.54%), Postives = 312/318 (98.11%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRAESLQSLV 60
           MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLF KSNPNRSLKTVVRAESLQSLV
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRAESLQSLV 60

Query: 61  SVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSGF 120
           S AVNIVQSNPPTWQSALLTNLLIFV GSPILASGLSVSGIASAFLLGTLTWRAFGPSGF
Sbjct: 61  SGAVNIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGF 120

Query: 121 LLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGE 180
           LLVATYFVIGTAATKVKMAQKEAQGVAEKR+GRRGLGSVIGSSAAGCVCALLMINNIGGE
Sbjct: 121 LLVATYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGE 180

Query: 181 SFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGL 240
           +FRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGA+SLEGTFAGL
Sbjct: 181 AFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGL 240

Query: 241 LAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVIN 300
           LAASVLAFVGCLLGD TAS AIVCV+ASQIANLGESIIGAVLQEKEGFQWLNNDVVNVIN
Sbjct: 241 LAASVLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVIN 300

Query: 301 ISMGSILAILMQQLILGH 318
           IS+GSILAI MQQLILGH
Sbjct: 301 ISIGSILAISMQQLILGH 318

[Close]

BLAST of Cp4.1LG14g03570 vs. NCBI nr
Match: KAG6577023.1 (Protein VTE6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 575 bits (1482), Expect = 7.32e-206
Identity = 309/319 (96.87%), Postives = 313/319 (98.12%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVV-RAESLQSL 60
           MATALLPSTHPFPLRFSPTPSPK RQFSSLPLPPKPLFPKSNPNRSLKTVV RAESLQSL
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLFPKSNPNRSLKTVVVRAESLQSL 60

Query: 61  VSVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSG 120
           VS AVNIVQSNPPTWQSALLTNLLIFVAGS ILA GLSVSGIASAFLLGTLTWRAFGPSG
Sbjct: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSRILALGLSVSGIASAFLLGTLTWRAFGPSG 120

Query: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180
           FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG
Sbjct: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180

Query: 181 ESFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAG 240
           E+FRQLWRLGFVA FCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAG
Sbjct: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAG 240

Query: 241 LLAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVI 300
           LLAASVLAFVGCLLGD+TASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVI
Sbjct: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVI 300

Query: 301 NISMGSILAILMQQLILGH 318
           NIS+GS+LAILMQQLILGH
Sbjct: 301 NISIGSVLAILMQQLILGH 319

[Close]

BLAST of Cp4.1LG14g03570 vs. NCBI nr
Match: XP_022923142.1 (protein VTE6, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 575 bits (1481), Expect = 1.04e-205
Identity = 307/319 (96.24%), Postives = 313/319 (98.12%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVV-RAESLQSL 60
           MATALLPSTHPFPLRFSPTPSPK RQFSSLPLPP+PLFPKSNPNRSLKTVV RAESLQSL
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPEPLFPKSNPNRSLKTVVVRAESLQSL 60

Query: 61  VSVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSG 120
           VS AVNIVQSNPPTWQSALLTNLLIFVAGSPILA GLSVSGIASAFLLGTLTWRAFGPSG
Sbjct: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120

Query: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180
           FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINN GG
Sbjct: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNTGG 180

Query: 181 ESFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAG 240
           E+FRQLWRLGFVA FCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGA+SLEGTFAG
Sbjct: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240

Query: 241 LLAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVI 300
           LLAASVLAFVGCLLGD+TASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVI
Sbjct: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVI 300

Query: 301 NISMGSILAILMQQLILGH 318
           NIS+GS+LAILMQQLILGH
Sbjct: 301 NISIGSVLAILMQQLILGH 319

[Close]

BLAST of Cp4.1LG14g03570 vs. NCBI nr
Match: KAG7015045.1 (Protein VTE6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 527 bits (1358), Expect = 2.28e-187
Identity = 281/293 (95.90%), Postives = 286/293 (97.61%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVV-RAESLQSL 60
           MATALLPSTHPFPLRFSPTPSPK RQFSSLPLPPKPL PKSNPNRSLKTVV RAESLQSL
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPKPLIPKSNPNRSLKTVVVRAESLQSL 60

Query: 61  VSVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSG 120
           VS AVNIVQSNPPTWQSALLTNLLIFVAGSPILA GLSVSGIASAFLLGTLTWRAFGPSG
Sbjct: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120

Query: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180
           FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG
Sbjct: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180

Query: 181 ESFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAG 240
           E+FRQLWRLGFVA FCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGA+SLEGTFAG
Sbjct: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240

Query: 241 LLAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLN 292
           LLAASVLAFVGCLLGD+TASEAIVCVVASQIANLGESIIGAVLQ KEGFQW++
Sbjct: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQGKEGFQWVS 293

[Close]

BLAST of Cp4.1LG14g03570 vs. ExPASy TrEMBL
Match: A0A6J1J8Q4 (protein VTE6, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482766 PE=3 SV=1)

HSP 1 Score: 577 bits (1487), Expect = 5.91e-207
Identity = 307/318 (96.54%), Postives = 312/318 (98.11%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRAESLQSLV 60
           MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLF KSNPNRSLKTVVRAESLQSLV
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFAKSNPNRSLKTVVRAESLQSLV 60

Query: 61  SVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSGF 120
           S AVNIVQSNPPTWQSALLTNLLIFV GSPILASGLSVSGIASAFLLGTLTWRAFGPSGF
Sbjct: 61  SGAVNIVQSNPPTWQSALLTNLLIFVVGSPILASGLSVSGIASAFLLGTLTWRAFGPSGF 120

Query: 121 LLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGE 180
           LLVATYFVIGTAATKVKMAQKEAQGVAEKR+GRRGLGSVIGSSAAGCVCALLMINNIGGE
Sbjct: 121 LLVATYFVIGTAATKVKMAQKEAQGVAEKRQGRRGLGSVIGSSAAGCVCALLMINNIGGE 180

Query: 181 SFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGL 240
           +FRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGA+SLEGTFAGL
Sbjct: 181 AFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAGL 240

Query: 241 LAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVIN 300
           LAASVLAFVGCLLGD TAS AIVCV+ASQIANLGESIIGAVLQEKEGFQWLNNDVVNVIN
Sbjct: 241 LAASVLAFVGCLLGDATASGAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVIN 300

Query: 301 ISMGSILAILMQQLILGH 318
           IS+GSILAI MQQLILGH
Sbjct: 301 ISIGSILAISMQQLILGH 318

[Close]

BLAST of Cp4.1LG14g03570 vs. ExPASy TrEMBL
Match: A0A6J1E5C7 (protein VTE6, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430893 PE=3 SV=1)

HSP 1 Score: 575 bits (1481), Expect = 5.03e-206
Identity = 307/319 (96.24%), Postives = 313/319 (98.12%), Query Frame = 0


Query: 1   MATALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVV-RAESLQSL 60
           MATALLPSTHPFPLRFSPTPSPK RQFSSLPLPP+PLFPKSNPNRSLKTVV RAESLQSL
Sbjct: 1   MATALLPSTHPFPLRFSPTPSPKHRQFSSLPLPPEPLFPKSNPNRSLKTVVVRAESLQSL 60

Query: 61  VSVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSG 120
           VS AVNIVQSNPPTWQSALLTNLLIFVAGSPILA GLSVSGIASAFLLGTLTWRAFGPSG
Sbjct: 61  VSGAVNIVQSNPPTWQSALLTNLLIFVAGSPILALGLSVSGIASAFLLGTLTWRAFGPSG 120

Query: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGG 180
           FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINN GG
Sbjct: 121 FLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNTGG 180

Query: 181 ESFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAG 240
           E+FRQLWRLGFVA FCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGA+SLEGTFAG
Sbjct: 181 EAFRQLWRLGFVACFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAVSLEGTFAG 240

Query: 241 LLAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVI 300
           LLAASVLAFVGCLLGD+TASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVI
Sbjct: 241 LLAASVLAFVGCLLGDVTASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVI 300

Query: 301 NISMGSILAILMQQLILGH 318
           NIS+GS+LAILMQQLILGH
Sbjct: 301 NISIGSVLAILMQQLILGH 319

[Close]

BLAST of Cp4.1LG14g03570 vs. ExPASy TrEMBL
Match: A0A6J1CPE4 (protein VTE6, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012898 PE=3 SV=1)

HSP 1 Score: 494 bits (1272), Expect = 3.32e-174
Identity = 266/317 (83.91%), Postives = 283/317 (89.27%), Query Frame = 0


Query: 4   ALLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPN--RSLKTVVRAESLQSLVS 63
           AL+ ST  FPL  SP  SPK  QF    LPPK L  K +P   RS K VVRAESLQSLVS
Sbjct: 2   ALMASTLLFPLHVSPISSPKFPQFPLFSLPPKTLISKPSPATIRSAKMVVRAESLQSLVS 61

Query: 64  VAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFL 123
             +NIV+SNP TW SALL+NLLIF+ GSPIL SGLSVSGIASAFLLGTLTWRAFGPSGFL
Sbjct: 62  GTLNIVRSNPATWHSALLSNLLIFIVGSPILVSGLSVSGIASAFLLGTLTWRAFGPSGFL 121

Query: 124 LVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGES 183
           LVATYF++GTAATKVKMAQKEAQGVAEKRKGRRG GSVIGSSAAGCVCALLMIN +GGE+
Sbjct: 122 LVATYFILGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCALLMINKVGGEA 181

Query: 184 FRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGLL 243
           F QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTF++VPRGTEGA+SLEGTFAGLL
Sbjct: 182 FTQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLL 241

Query: 244 AASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINI 303
           AA  L+FVGCLLGD+TA EAIVCV+ASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINI
Sbjct: 242 AAIALSFVGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINI 301

Query: 304 SMGSILAILMQQLILGH 318
           SMGSILA+LMQQLILGH
Sbjct: 302 SMGSILAVLMQQLILGH 318

[Close]

BLAST of Cp4.1LG14g03570 vs. ExPASy TrEMBL
Match: A0A0A0KVG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083590 PE=3 SV=1)

HSP 1 Score: 492 bits (1267), Expect = 1.60e-173
Identity = 263/314 (83.76%), Postives = 281/314 (89.49%), Query Frame = 0


Query: 5   LLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRAESLQSLVSVAV 64
           ++ ST PFPL  SP    K  QF  LP P KPL  KSNPN S K VVRA+S ++L S AV
Sbjct: 4   MISSTLPFPLLLSP----KRHQFPLLPFPLKPLITKSNPNPSSKMVVRAQSFETLASGAV 63

Query: 65  NIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVA 124
           N++QSNP TW SALL+NLLIF+ GSPIL SGLS SGIASAFLLGTLTWRAFGPSGFLLVA
Sbjct: 64  NLLQSNPATWHSALLSNLLIFLLGSPILVSGLSPSGIASAFLLGTLTWRAFGPSGFLLVA 123

Query: 125 TYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGESFRQ 184
           TYFVIGTAATKVKMAQKEAQGVAEKRKGRRG GSVIGSSAAGCVCA+LMIN +GGE+F Q
Sbjct: 124 TYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLMINKVGGEAFAQ 183

Query: 185 LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGLLAAS 244
           LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT F++VPRGTEGA+SLEGTFAGLLAA 
Sbjct: 184 LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLEGTFAGLLAAI 243

Query: 245 VLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMG 304
            LAFVGCLLGD+TASEAIVCV+ASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMG
Sbjct: 244 ALAFVGCLLGDVTASEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMG 303

Query: 305 SILAILMQQLILGH 318
           SILA+LMQQLILGH
Sbjct: 304 SILAVLMQQLILGH 313

[Close]

BLAST of Cp4.1LG14g03570 vs. ExPASy TrEMBL
Match: A0A5D3CWL7 (Protein VTE6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00320 PE=3 SV=1)

HSP 1 Score: 490 bits (1262), Expect = 9.22e-173
Identity = 262/314 (83.44%), Postives = 280/314 (89.17%), Query Frame = 0


Query: 5   LLPSTHPFPLRFSPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRAESLQSLVSVAV 64
           ++ ST PFPL  SP    K  QF  LPLP KPL PKSNPN S + VVRA+S  +L S A 
Sbjct: 4   MISSTLPFPLLLSP----KRHQFPLLPLPLKPLIPKSNPNPSSQMVVRAQSFHTLASGAF 63

Query: 65  NIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWRAFGPSGFLLVA 124
           N++QSNP TWQSALL+NLLIFV GSPIL SGLS+SGIASAFLLGTLTWRAFGPSGFLLVA
Sbjct: 64  NLLQSNPSTWQSALLSNLLIFVLGSPILVSGLSLSGIASAFLLGTLTWRAFGPSGFLLVA 123

Query: 125 TYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLMINNIGGESFRQ 184
           TYFVIGTAATKVKMAQKEAQGVAEKRKGRRG GSVIGSSAAGCVCA+LMIN +GGE+F Q
Sbjct: 124 TYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAVLMINKVGGEAFSQ 183

Query: 185 LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGLLAAS 244
           LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT F++VPRGTEGA+SLEGTFAGLLAA 
Sbjct: 184 LWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTNFKVVPRGTEGAVSLEGTFAGLLAAI 243

Query: 245 VLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMG 304
            LA  GCLLGD+TA EAIVCV+ASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMG
Sbjct: 244 TLASAGCLLGDVTAPEAIVCVIASQIANLGESIIGAVLQEKEGFQWLNNDVVNVINISMG 303

Query: 305 SILAILMQQLILGH 318
           SILA+LMQQLILGH
Sbjct: 304 SILAVLMQQLILGH 313

[Close]

BLAST of Cp4.1LG14g03570 vs. TAIR 10
Match: AT1G78620.1 (Protein of unknown function DUF92, transmembrane )

HSP 1 Score: 377.5 bits (968), Expect = 1.1e-104
Identity = 214/323 (66.25%), Postives = 251/323 (77.71%), Query Frame = 0


Query: 2   ATALLPSTH-PFPLRF-------SPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRA 61
           +T LL S+    PLRF       S +P  +  +F    L P      S+ +R+      A
Sbjct: 6   STLLLNSSRSALPLRFPKFSGFSSSSPFARSYRFGRRNLEPLSNGMLSSGSRADGATAAA 65

Query: 62  ESLQSLVSVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWR 121
            S++ +++ A+ ++QS  PTW+SA+  NLLIFV GSP+L +GLS SGIA+AFLLGTLTWR
Sbjct: 66  ASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWR 125

Query: 122 AFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSAAGCVCALLM 181
           A+G +GFLLVA YFVIGTAATKVKM QKEAQGVAEKRKGRRG  SVIGSSAAGCVCA L 
Sbjct: 126 AYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVCAFLS 185

Query: 182 INNIGGESFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVPRGTEGAISL 241
           I  +GG +F QL+RLGFV+SFCTK+SDTVSSEIGKAYG+ TYL TTF+IVPRGTEGA+SL
Sbjct: 186 IYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSL 245

Query: 242 EGTFAGLLAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQEKEGFQWLNN 301
           EGT AGLLA+  LA VGC LG IT  EA VCV+ASQIANLGESIIGA  Q+KEGF+WLNN
Sbjct: 246 EGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGFKWLNN 305

Query: 302 DVVNVINISMGSILAILMQQLIL 317
           DVVNVINIS+GSI+AILMQQ IL
Sbjct: 306 DVVNVINISLGSIVAILMQQFIL 328

[Close]

BLAST of Cp4.1LG14g03570 vs. TAIR 10
Match: AT1G78620.2 (Protein of unknown function DUF92, transmembrane )

HSP 1 Score: 369.8 bits (948), Expect = 2.2e-102
Identity = 214/332 (64.46%), Postives = 251/332 (75.60%), Query Frame = 0


Query: 2   ATALLPSTH-PFPLRF-------SPTPSPKLRQFSSLPLPPKPLFPKSNPNRSLKTVVRA 61
           +T LL S+    PLRF       S +P  +  +F    L P      S+ +R+      A
Sbjct: 6   STLLLNSSRSALPLRFPKFSGFSSSSPFARSYRFGRRNLEPLSNGMLSSGSRADGATAAA 65

Query: 62  ESLQSLVSVAVNIVQSNPPTWQSALLTNLLIFVAGSPILASGLSVSGIASAFLLGTLTWR 121
            S++ +++ A+ ++QS  PTW+SA+  NLLIFV GSP+L +GLS SGIA+AFLLGTLTWR
Sbjct: 66  ASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLTWR 125

Query: 122 AFGPSGFLLVATYFVI---------GTAATKVKMAQKEAQGVAEKRKGRRGLGSVIGSSA 181
           A+G +GFLLVA YFVI         GTAATKVKM QKEAQGVAEKRKGRRG  SVIGSSA
Sbjct: 126 AYGSAGFLLVAAYFVIVSAFVINLNGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSA 185

Query: 182 AGCVCALLMINNIGGESFRQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFRIVP 241
           AGCVCA L I  +GG +F QL+RLGFV+SFCTK+SDTVSSEIGKAYG+ TYL TTF+IVP
Sbjct: 186 AGCVCAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVP 245

Query: 242 RGTEGAISLEGTFAGLLAASVLAFVGCLLGDITASEAIVCVVASQIANLGESIIGAVLQE 301
           RGTEGA+SLEGT AGLLA+  LA VGC LG IT  EA VCV+ASQIANLGESIIGA  Q+
Sbjct: 246 RGTEGAMSLEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQD 305

Query: 302 KEGFQWLNNDVVNVINISMGSILAILMQQLIL 317
           KEGF+WLNNDVVNVINIS+GSI+AILMQQ IL
Sbjct: 306 KEGFKWLNNDVVNVINISLGSIVAILMQQFIL 337

[Close]

BLAST of Cp4.1LG14g03570 vs. TAIR 10
Match: AT5G19930.1 (Protein of unknown function DUF92, transmembrane )

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-05
Identity = 60/221 (27.15%), Postives = 95/221 (42.99%), Query Frame = 0


Query: 96  LSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRG 155
           L +SG  + FL+ T+ + A    G LL+  +F+  +  TKV   +K    V  K  G+R 
Sbjct: 29  LDLSGGIAGFLVMTIHFTAGFRYGALLL-VFFLTSSKLTKVGEDKKRRVDVEFKEGGQRN 88

Query: 156 LGSVIGSSAAGCVCALLMINNIG-------GESFRQLWRL--GFVASFCTKLSDTVSSEI 215
              V+ +S    V  ++     G        +    +  L  G +  +     DT SSE+
Sbjct: 89  WVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGDTWSSEL 148

Query: 216 GKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGLLAASVLAFVGCLLGDITASEAI---- 275
           G        L+TTF+ V +GT G ++  G  A L A + +     + G  TAS A     
Sbjct: 149 GVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCASDVAL 208

Query: 276 -------VCVVASQIANLGESIIGAVLQEKEGFQWLNNDVV 297
                  +  +A    +L +SI+GA +Q   GF  + N VV
Sbjct: 209 KQLLVIPLSALAGLCGSLIDSILGATIQ-FSGFCSVRNKVV 247

[Close]

BLAST of Cp4.1LG14g03570 vs. TAIR 10
Match: AT5G19930.2 (Protein of unknown function DUF92, transmembrane )

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-05
Identity = 60/221 (27.15%), Postives = 95/221 (42.99%), Query Frame = 0


Query: 96  LSVSGIASAFLLGTLTWRAFGPSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRG 155
           L +SG  + FL+ T+ + A    G LL+  +F+  +  TKV   +K    V  K  G+R 
Sbjct: 29  LDLSGGIAGFLVMTIHFTAGFRYGALLL-VFFLTSSKLTKVGEDKKRRVDVEFKEGGQRN 88

Query: 156 LGSVIGSSAAGCVCALLMINNIG-------GESFRQLWRL--GFVASFCTKLSDTVSSEI 215
              V+ +S    V  ++     G        +    +  L  G +  +     DT SSE+
Sbjct: 89  WVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGDTWSSEL 148

Query: 216 GKAYGRITYLVTTFRIVPRGTEGAISLEGTFAGLLAASVLAFVGCLLGDITASEAI---- 275
           G        L+TTF+ V +GT G ++  G  A L A + +     + G  TAS A     
Sbjct: 149 GVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCASDVAL 208

Query: 276 -------VCVVASQIANLGESIIGAVLQEKEGFQWLNNDVV 297
                  +  +A    +L +SI+GA +Q   GF  + N VV
Sbjct: 209 KQLLVIPLSALAGLCGSLIDSILGATIQ-FSGFCSVRNKVV 247

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g03570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYM0	1.5e-103	66.25	Protein VTE6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VTE6 PE=1 SV=1	[more]
P73555	6.7e-43	45.57	Uncharacterized membrane protein sll0875 OS=Synechocystis sp. (strain PCC 6803 /...	[more]
Q58343	2.4e-16	32.88	Uncharacterized membrane protein MJ0933 OS=Methanocaldococcus jannaschii (strain...	[more]
Q0WP96	2.7e-04	27.15	Protein PGR OS=Arabidopsis thaliana OX=3702 GN=PGR PE=2 SV=1	[more]

BLAST of Cp4.1LG14g03570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553437.1	2.93e-214	100.00	protein VTE6, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984475.1	1.22e-206	96.54	protein VTE6, chloroplastic-like [Cucurbita maxima]	[more]
KAG6577023.1	7.32e-206	96.87	Protein VTE6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022923142.1	1.04e-205	96.24	protein VTE6, chloroplastic-like [Cucurbita moschata]	[more]
KAG7015045.1	2.28e-187	95.90	Protein VTE6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG14g03570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J8Q4	5.91e-207	96.54	protein VTE6, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482766 PE=...	[more]
A0A6J1E5C7	5.03e-206	96.24	protein VTE6, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430893 P...	[more]
A0A6J1CPE4	3.32e-174	83.91	protein VTE6, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0KVG7	1.60e-173	83.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083590 PE=3 SV=1	[more]
A0A5D3CWL7	9.22e-173	83.44	Protein VTE6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00320 PE...	[more]

BLAST of Cp4.1LG14g03570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78620.1	1.1e-104	66.25	Protein of unknown function DUF92, transmembrane	[more]
AT1G78620.2	2.2e-102	64.46	Protein of unknown function DUF92, transmembrane	[more]
AT5G19930.1	1.9e-05	27.15	Protein of unknown function DUF92, transmembrane	[more]
AT5G19930.2	1.9e-05	27.15	Protein of unknown function DUF92, transmembrane	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002794	Protein of unknown function DUF92, TMEM19	PFAM	PF01940	DUF92	coord: 84..304 e-value: 8.9E-48 score: 162.8
IPR002794	Protein of unknown function DUF92, TMEM19	PANTHER	PTHR13353	TRANSMEMBRANE PROTEIN 19	coord: 68..315
None	No IPR available	PANTHER	PTHR13353:SF5	TRANSMEMBRANE PROTEIN 19	coord: 68..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g03570.1	Cp4.1LG14g03570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane