Cp4.1LG14g03380 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG14g03380
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUbiquitin-conjugating enzyme E2 36
LocationCp4.1LG14: 2274107 .. 2278660 (-)
RNA-Seq ExpressionCp4.1LG14g03380
SyntenyCp4.1LG14g03380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAAAGGATTGGGCTTTGCATTAGAAACTTCTACCTTCAAAGCTAAGTCTTTATAATCTAGAGAGAGGAAAGCGTCCCTTTTCCTGTTTTCTCTCTCTTCATTTCGTCTAAACCCTATCGCGAGCTCTCAATCGATCTTCAATGGCGAACAGTAATCTTCCCCGAAGGATCATCAAGGTAACATCACTGATCCTCTTCAAGATCTCCTTCATTTTCCCCGATGTCTTTATTCTGCTCGATTGATTACTTTGGTGAAGAAATGGTCTGGTTTTGCTGTTTGGATTTCGGATATTCTTTTAGATTTATGTGTCAGTAGAATTGGGATTGGAATTGATTTTTCTCCTCCATTTTGTGAACAATCGCAGGAAACTCAGCGTCTCCTTAGTGAACCGGGTGAGTTTTGGGTGTATTTGTTGGATTATTTTCGAATATGGGGGTTGTTTGATTCCTGATCTTGTTACTGGGAGTTCTGTTTTTTTTGTGTTATTTGGGTCTTGGTCGTTGATAGATTTATTGTTTGGATTAATTCATCCGATAATTATGAAGTCGAAGTTTATTTTGATTTAGTTGATCTCGATCTTTGATATGTGATTTTAGCCCCTGGGATTAGTGCCTCGCCGTCAGAAGATAATATGCGATATTTTAACGTGATGATCCTTGGCCCGACCCAGTCACCCTATGAAGGTAAATTACTTGAACAGTATGTTGTTAGGAACGTTAAATTCTTTTGAATAATTTGCTATTCCATTGTTGGTACATATGAATGGGTGTAGAACCAACTACGTATTTAAGTGTAAATTCGCCTAAGTTCTACATATGAATTACTATGAAGAATGAAATGACATTCACAGTGAACGCTATGGGATTATCTTCTACTCGATGAAAACAAAATGTCTTATCTTCCCTTTTAGCTTTGGTTTTGTAAACTTTATGCCCTATTGTTCAACGGTAGAATGTCACTCTTCTTGGCTGCTAAACTTGGGAACATGGTGTTTACATACTACTGACAACTGAATAGGTTTTATTTAGAGATGTAATCTGATCATCATTTCACTTTTTTTTATTGAATAATGTTATATGTCATCTTTCATTTTGGGCTTCTTTTCTCCTGACCCTTTGTCAATTCTAAAGTTGTTAGTCCACTTCAATGTTCTTTTTACGCATATATTTGTCCTGAATCCAAAGTACTTTGCAGGAGGAGTTTTCAAGTTGGAGCTATTTTTACCCGAAGAATATCCTATGGCTGCTCCCAAGGTAATTTGTAATTCTTTCCTTCTTAGCTTATCAGATAAACTTTTTCATNAAAAAAAAGTCTCATCTTCCCTTTTAACTTTGGTTTTGTAAACTTTATGCCCTATTGTTCAACGGTAGAATGTCACTCTTCTTGGCTGCTAAACTTGGGAACATGTTGTTTACATACTACTGACAACTGAATAGGTTTTATTTAGACATGTAATCTGATCATCATTTCACTTTTTTTTATTGAATAATGTTATATGTCATCTTTCATTTTGGGCTTCTTTTCTCCTGNTTTCAATATTCTTTTTAAGCATATATTTGTCCTGAATCCAAAGTACTTTGCAGGAGGAGTTTTCAAGTTGGAGCTATTTTTACCCGAGGAATATCCTATGGCTGCTCCCAAGGTAATTTGTAATTCTTTCCTACTTGGTTTATCAGATAATTTTTTTTCATTTCTTTTACCAATATTCTTTAAAAAAGTGTCATATTTTTTTGTTTTGTTTTGTTTTTCATTAAAAAAAATAAAAATGTATCAACAGAAGTCTCCAGTAAAAAAACATAGGGCTTTTGGGGGATTTCCAAGTACTATTGAAGATCATTTGACAACTTCTAACCTAAATGTGCTGTTAAAATCTCTTCAAGTTTCTTATACTTACTGAGCTACTTATACTTCCTCGTATATTACTTATTGAATTATGATTTCACTTATACATCATGAGGGTGGTATGTCTAGAAGTAATCAGAAATTGGATTTGCCATCATTACAATATTTTTTTCCTTTTCGTTTCTTCCCCATTCTCTTGAGGGTTTCCGATCTTGCACTGAATATAAATAAAAAGATCAGAAGCCATCGTAATTTACTTTTCATACACAGTTTTTTCCATTTCATGAATCATTATATTTACAACTTAATCTTGTTGATCTATGATACACATGTGAGCACATTGATATTACGTGAAGGGAATTTTTGGTAGTTGAGGTCTTCATGGTTGGAGATGGAGAATAGCTTATTTCATGACTTGCTTTGTCGGGCCTAGCTTTGAAAGATTGAGAGGAAACATGTTTGGCTGGACTAAATGAGGAAACATCTTGCGAGAGTCCAGTTGTGTGGAATGCAATTCATGACAAAATGTTCTAGGCAATCGTTTCAAACTTCTTTTTTCTCATTTTGCATAGAAAACCAATTTTCATAAAGAAGATAGAAGAGCAAAATTAAGGCGAGGCTCACAAAAATAAGGGCCTGACAGAAATAGGAAAAGCATCACTCACATTTACAAAATGGACCCCAGTGCATTCCCCAAACTTGTACTTCAGTTAGACTACTGTTTTCTTTTCCTGTTCCTATAAAATAAATAAAACTAATTTTTATTCTTGGAGATTCTATTATTAATTTTTGTAGAATGTACCTAGTGATGTAAGTAAGTATGCCTGTTACTTTTTTTTTTCTCGACTTATGTATGAAAAGCTATCTGTCCTTTTGACTGGACTGTCACGTGAGTGAAGAAACTGTTGTTTAAGGATTTAACGACCTGCTCCATGCCGATGACACTTCAATTATCATTATTACTTATTTTTTGTAGTACATGTAATCATGTATTAAGTAAAGTGTGGTTGTTTATCTGGTTGATTTTACCTTGTTTTGTGTCGAACCTGTTGGGGGGTGGGGGTTTGCATGAAGCAATTGACACTCATTACACATAAGTTAACTAATTCGACTTGAGTGGTTGATCTTCATGCCTTTTGCGTACTGTTCTATAAACAGAAAATTGATCCACTCATAAAAGAGATGTAAAACAACGGAAATGTTTAAACAGTGTTGGGCAATTTTTTTTTAAGGTTCAAGTTATTGCCTTTTGATGTCCTAGGACTGAAGATTCTGTATCTAGTACGCTAGGTGGTCCTGTTGGAACTTATCATAACTTGTTTTGATTGCCTCCACTACCATCTTTTCCCCTTCGTCTGTTTCCATCTTCATTTACATATTTTTATTTTTGCGTGATTATTTTTGTGGTGCAGGTTCGATTTCTCACAAAGATTTATCACCCGAATATTGATAAGGTACGCGTCTATTTTCATAATTCTTATTGCCGTCCCCACCGACGTGCTGCAGTTTCATTATTGATGGTGTGATTGTTTGTAATTTAGCTTGGGAGGATATGCCTTGATATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGGTATTATAATGTTAGGTGTGATTTTTCAGTGACTGCATATTAAATTTGAACATTTTGCATGGTATTTTATTCATTTGATTAGTACAAGGAAATACAGATCTGAGAATTTTACCACCATGCACATCTTATGTAGCACATTGGTTTAGAGAGCTTTAGTTGTTTTTCTAGGACCTTCCCCAACTGCGGTCATTTCCTTCGTAAATTTATCTTCAATAGTTCCGATAATCATACGAAAGTTGAAGAGATTCAATTACCACTGGCATCCATTTCTTCTCCTCTTCCTTCTGCGTCCCTTTTCTATGAACTTTTTTTTTAGTAACAGTCACTTTCTCTATCACTTTCTGTCAGTATTCAAGCTCTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAACATTGCCAAACATTGGAAATCGAATGAGGCCGAAGCTGTTGAAACAGGTGAGTTGGTCTAAACCATTGCTTTTGTTAAACCTTTTGCTTAACTAACCTTTTTGATCCTGAGTTTAAGCTTTGTTTCAGTTTGGTTCTTGTGTTTTTAAAAGCTCTATATCTTTAGCTTTTGATTAAATCTGGTTTAAGAAGTGTTATCATGAGATGATTGTTGATTCTGTCGGTGGAGAGGGACCGAGTATTGTTTGCGTTTAAAGCTAATGAATCGAGTCGGGTTTAGAATGTTGCCACTCCTTTCAGTAGAAGTAATGTAAAATTGTAGCTTAATTTGGTGTAGCCTCTGACTGACACCATTTTGTGGTTGGATGTTCTCAGCAAAGGAATGGACTCGATTATACGCAAGTGGTGCGTAAAGAAGGGAAACTGCGGAAGCCTTTTATCTCTTCGGTTTTTAATAACATGAATGTGCCATTTGCTCTGTGGATTTTAATGAAAAAATCTGGAAGAATTTAGTGTCAAAATTGTAACTGTCTCTATAATTGTGCGTCTTTTGGCAGGAGTCTGTACCCCCATACTTTGTATGATCATGATATGATTAGATGGAATACCTTCTTCTAAGTTCAATATCTCCTAAAATTGTAAGCCCTCGCCATATGCCCCTTATTTTTCAAGAATGTTTTAATTATTAACAACTTCA

mRNA sequence

AATAAAGGATTGGGCTTTGCATTAGAAACTTCTACCTTCAAAGCTAAGTCTTTATAATCTAGAGAGAGGAAAGCGTCCCTTTTCCTGTTTTCTCTCTCTTCATTTCGTCTAAACCCTATCGCGAGCTCTCAATCGATCTTCAATGGCGAACAGTAATCTTCCCCGAAGGATCATCAAGGAAACTCAGCGTCTCCTTAGTGAACCGGCCCCTGGGATTAGTGCCTCGCCGTCAGAAGATAATATGCGATATTTTAACGTGATGATCCTTGGCCCGACCCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAGCTATTTTTACCCGAAGAATATCCTATGGCTGCTCCCAAGTTGGAGCTATTTTTACCCGAGGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTCACAAAGATTTATCACCCGAATATTGATAAGCTTGGGAGGATATGCCTTGATATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATTCAAGCTCTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAACATTGCCAAACATTGGAAATCGAATGAGGCCGAAGCTCAAAGGAATGGACTCGATTATACGCAAGTGGTGCGTAAAGAAGGGAAACTGCGGAAGCCTTTTATCTCTTCGGTTTTTAATAACATGAATGTGCCATTTGCTCTGTGGATTTTAATGAAAAAATCTGGAAGAATTTAGTGTCAAAATTGTAACTGTCTCTATAATTGTGCGTCTTTTGGCAGGAGTCTGTACCCCCATACTTTGTATGATCATGATATGATTAGATGGAATACCTTCTTCTAAGTTCAATATCTCCTAAAATTGTAAGCCCTCGCCATATGCCCCTTATTTTTCAAGAATGTTTTAATTATTAACAACTTCA

Coding sequence (CDS)

ATGGCGAACAGTAATCTTCCCCGAAGGATCATCAAGGAAACTCAGCGTCTCCTTAGTGAACCGGCCCCTGGGATTAGTGCCTCGCCGTCAGAAGATAATATGCGATATTTTAACGTGATGATCCTTGGCCCGACCCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAGCTATTTTTACCCGAAGAATATCCTATGGCTGCTCCCAAGTTGGAGCTATTTTTACCCGAGGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTCACAAAGATTTATCACCCGAATATTGATAAGCTTGGGAGGATATGCCTTGATATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATTCAAGCTCTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAACATTGCCAAACATTGGAAATCGAATGAGGCCGAAGCTCAAAGGAATGGACTCGATTATACGCAAGTGGTGCGTAAAGAAGGGAAACTGCGGAAGCCTTTTATCTCTTCGGTTTTTAATAACATGAATGTGCCATTTGCTCTGTGGATTTTAATGAAAAAATCTGGAAGAATTTAG

Protein sequence

MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQVVRKEGKLRKPFISSVFNNMNVPFALWILMKKSGRI
Homology
[Close]
BLAST of Cp4.1LG14g03380 vs. ExPASy Swiss-Prot
Match: Q94A97 (Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana OX=3702 GN=UBC35 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.3e-72
Identity = 139/163 (85.28%), Postives = 143/163 (87.73%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVF      
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVF------ 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                    KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  ---------KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRL 148

[Close]
BLAST of Cp4.1LG14g03380 vs. ExPASy Swiss-Prot
Match: Q9FZ48 (Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana OX=3702 GN=UBC36 PE=1 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.6e-72
Identity = 138/163 (84.66%), Postives = 143/163 (87.73%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVF      
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVF------ 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                    KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  ---------KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 148

[Close]
BLAST of Cp4.1LG14g03380 vs. ExPASy Swiss-Prot
Match: P35128 (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster OX=7227 GN=ben PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.2e-59
Identity = 110/159 (69.18%), Postives = 130/159 (81.76%), Query Frame = 0 

Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           S+LPRRIIKETQRL+ EP PGI+A P E+N RYF+V++ GP  SP+EGGVF         
Sbjct: 2   SSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVF--------- 61

Query: 64  YPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLL 123
                 KLELFLPE+YPM+APKVRF+TKIYHPNID+LGRICLD+LKDKWSPALQIRT+LL
Sbjct: 62  ------KLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILL 121

Query: 124 SIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQ 163
           SIQALLSAPNPDDPL+ ++A+ WK NEAEA RN  ++TQ
Sbjct: 122 SIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQ 145

[Close]
BLAST of Cp4.1LG14g03380 vs. ExPASy Swiss-Prot
Match: Q95XX0 (Ubiquitin-conjugating enzyme E2 13 OS=Caenorhabditis elegans OX=6239 GN=ubc-13 PE=1 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 4.6e-58
Identity = 112/156 (71.79%), Postives = 126/156 (80.77%), Query Frame = 0 

Query: 6   LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYP 65
           LPRRIIKETQRLL++P PGISA+P E N RYF+VMI GP  SP+ GGVF           
Sbjct: 5   LPRRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVF----------- 64

Query: 66  MAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSI 125
               KLELFLPEEYPMAAPKVRF+TKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSI
Sbjct: 65  ----KLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSI 124

Query: 126 QALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYT 162
           QALLSAPNP+DPL+ ++A+ WK+NEAEA +    +T
Sbjct: 125 QALLSAPNPEDPLATDVAEQWKTNEAEAIKTAKQWT 145

[Close]
BLAST of Cp4.1LG14g03380 vs. ExPASy Swiss-Prot
Match: Q9EQX9 (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 6.0e-58
Identity = 111/160 (69.38%), Postives = 126/160 (78.75%), Query Frame = 0 

Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG F         
Sbjct: 2   AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTF--------- 61

Query: 64  YPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLL 123
                 KLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLL
Sbjct: 62  ------KLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLL 121

Query: 124 SIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           SIQALLSAPNPDDPL+ ++A+ WKSNEA+A      +T++
Sbjct: 122 SIQALLSAPNPDDPLANDVAEQWKSNEAQAIETARAWTRL 146

[Close]
BLAST of Cp4.1LG14g03380 vs. NCBI nr
Match: KAG5597575.1 (hypothetical protein H5410_038807 [Solanum commersonii])

HSP 1 Score: 277 bits (708), Expect = 2.08e-92
Identity = 139/163 (85.28%), Postives = 148/163 (90.80%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
           PEEYPMAAPK  L + +    A+ +VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  PEEYPMAAPKCLLVIDQ---FASQQVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 163
           VLLSIQALLSAPNPDDPLSENIAKHWKSNE EA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEVEAVETAKEWTRL 160

[Close]
BLAST of Cp4.1LG14g03380 vs. NCBI nr
Match: XP_012464625.1 (PREDICTED: ubiquitin-conjugating enzyme E2 36-like isoform X1 [Gossypium raimondii] >XP_016706047.1 ubiquitin-conjugating enzyme E2 36 isoform X1 [Gossypium hirsutum] >TYH35351.1 hypothetical protein ES332_D13G187300v1 [Gossypium tomentosum] >TYI47523.1 hypothetical protein E1A91_D13G179600v1 [Gossypium mustelinum] >KAG4112291.1 hypothetical protein ERO13_D13G153300v2 [Gossypium hirsutum] >KJB82040.1 hypothetical protein B456_013G173200 [Gossypium raimondii])

HSP 1 Score: 276 bits (705), Expect = 4.68e-92
Identity = 140/163 (85.89%), Postives = 146/163 (89.57%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
           PEEYPMAAPK +L L          VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  PEEYPMAAPKSKLSL----------VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 163
           VLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 153

[Close]
BLAST of Cp4.1LG14g03380 vs. NCBI nr
Match: XP_038685184.1 (ubiquitin-conjugating enzyme E2 36-like [Tripterygium wilfordii])

HSP 1 Score: 275 bits (703), Expect = 7.96e-92
Identity = 140/163 (85.89%), Postives = 143/163 (87.73%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
           PEEYPMAAPK               VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  PEEYPMAAPK---------------VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 163
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++TQ+
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTQL 148

[Close]
BLAST of Cp4.1LG14g03380 vs. NCBI nr
Match: VDD07427.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 275 bits (703), Expect = 1.42e-91
Identity = 138/165 (83.64%), Postives = 147/165 (89.09%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVM+LGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMVLGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKLELFLP--EEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQI 120
           PEEYPMAAPK+  F      +     +VRFLTKIYHPNIDKLGRICLDILKDKWSPALQI
Sbjct: 61  PEEYPMAAPKVSHFCEFFTLFSFHVSRVRFLTKIYHPNIDKLGRICLDILKDKWSPALQI 120

Query: 121 RTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 163
           RTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 RTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 165

[Close]
BLAST of Cp4.1LG14g03380 vs. NCBI nr
Match: PPS01919.1 (hypothetical protein GOBAR_AA18745 [Gossypium barbadense])

HSP 1 Score: 275 bits (702), Expect = 2.24e-91
Identity = 142/168 (84.52%), Postives = 149/168 (88.69%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPK---LELFLPEEYPMAAPK--VRFLTKIYHPNIDKLGRICLDILKDKWSPA 120
           PEEYPMAAPK   L L    E  +A+    VRFLTKIYHPNIDKLGRICLDILKDKWSPA
Sbjct: 61  PEEYPMAAPKEECLHLICCAEQTLASKLSLVRFLTKIYHPNIDKLGRICLDILKDKWSPA 120

Query: 121 LQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 163
           LQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA     ++T++
Sbjct: 121 LQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 168

[Close]
BLAST of Cp4.1LG14g03380 vs. ExPASy TrEMBL
Match: F6H2P3 (UBC core domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_19s0014g01460 PE=3 SV=1)

HSP 1 Score: 280 bits (715), Expect = 6.13e-94
Identity = 143/163 (87.73%), Postives = 145/163 (88.96%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
           PEEYPMAAPK               VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  PEEYPMAAPK---------------VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 163
           VLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA+RNGL   QV
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKTNEAEARRNGLACMQV 148

[Close]
BLAST of Cp4.1LG14g03380 vs. ExPASy TrEMBL
Match: A0A5D2HYZ7 (UBC core domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D13G187300v1 PE=3 SV=1)

HSP 1 Score: 276 bits (705), Expect = 2.27e-92
Identity = 140/163 (85.89%), Postives = 146/163 (89.57%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
           PEEYPMAAPK +L L          VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  PEEYPMAAPKSKLSL----------VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 163
           VLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 153

[Close]
BLAST of Cp4.1LG14g03380 vs. ExPASy TrEMBL
Match: A0A1U8KU94 (ubiquitin-conjugating enzyme E2 36-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107920724 PE=3 SV=1)

HSP 1 Score: 276 bits (705), Expect = 2.27e-92
Identity = 140/163 (85.89%), Postives = 146/163 (89.57%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
           PEEYPMAAPK +L L          VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  PEEYPMAAPKSKLSL----------VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 163
           VLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 153

[Close]
BLAST of Cp4.1LG14g03380 vs. ExPASy TrEMBL
Match: A0A0D2W708 (UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_013G173200 PE=3 SV=1)

HSP 1 Score: 276 bits (705), Expect = 2.27e-92
Identity = 140/163 (85.89%), Postives = 146/163 (89.57%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
           PEEYPMAAPK +L L          VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  PEEYPMAAPKSKLSL----------VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 163
           VLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 153

[Close]
BLAST of Cp4.1LG14g03380 vs. ExPASy TrEMBL
Match: A0A5D2S4Z6 (UBC core domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D13G179600v1 PE=3 SV=1)

HSP 1 Score: 276 bits (705), Expect = 2.27e-92
Identity = 140/163 (85.89%), Postives = 146/163 (89.57%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
           PEEYPMAAPK +L L          VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  PEEYPMAAPKSKLSL----------VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 163
           VLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 153

[Close]
BLAST of Cp4.1LG14g03380 vs. TAIR 10
Match: AT1G78870.2 (ubiquitin-conjugating enzyme 35 )

HSP 1 Score: 272.7 bits (696), Expect = 2.3e-73
Identity = 139/163 (85.28%), Postives = 143/163 (87.73%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVF      
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVF------ 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                    KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  ---------KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRL 148

[Close]
BLAST of Cp4.1LG14g03380 vs. TAIR 10
Match: AT1G16890.2 (ubiquitin-conjugating enzyme 36 )

HSP 1 Score: 271.9 bits (694), Expect = 3.9e-73
Identity = 138/163 (84.66%), Postives = 143/163 (87.73%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVF      
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVF------ 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                    KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  ---------KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 148

[Close]
BLAST of Cp4.1LG14g03380 vs. TAIR 10
Match: AT1G78870.1 (ubiquitin-conjugating enzyme 35 )

HSP 1 Score: 268.1 bits (684), Expect = 5.7e-72
Identity = 139/164 (84.76%), Postives = 143/164 (87.20%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEG-GVFKLELF 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEG GVF     
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGRGVF----- 60

Query: 61  LPEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIR 120
                     KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIR
Sbjct: 61  ----------KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIR 120

Query: 121 TVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           TVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 TVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRL 149

[Close]
BLAST of Cp4.1LG14g03380 vs. TAIR 10
Match: AT1G16890.3 (ubiquitin-conjugating enzyme 36 )

HSP 1 Score: 263.1 bits (671), Expect = 1.8e-70
Identity = 137/172 (79.65%), Postives = 143/172 (83.14%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSE---------PAPGISASPSEDNMRYFNVMILGPTQSPYEG 60
           MANSNLPRRIIKETQRLLSE         P+PGISASPSE+NMRYFNVMILGPTQSPYEG
Sbjct: 1   MANSNLPRRIIKETQRLLSEPGNFITSFDPSPGISASPSEENMRYFNVMILGPTQSPYEG 60

Query: 61  GVFKLELFLPEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK 120
           GVF               KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK
Sbjct: 61  GVF---------------KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK 120

Query: 121 WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 157

[Close]
BLAST of Cp4.1LG14g03380 vs. TAIR 10
Match: AT1G78870.3 (ubiquitin-conjugating enzyme 35 )

HSP 1 Score: 211.1 bits (536), Expect = 8.3e-55
Identity = 108/123 (87.80%), Postives = 108/123 (87.80%), Query Frame = 0 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVF      
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVF------ 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                    KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  ---------KLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 108

Query: 121 VLL 124
           VLL
Sbjct: 121 VLL 108

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g03380 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94A973.3e-7285.28Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana OX=3702 GN=UBC35 PE=1... [more]
Q9FZ485.6e-7284.66Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana OX=3702 GN=UBC36 PE=1... [more]
P351289.2e-5969.18Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster OX=7227 GN=ben PE=1... [more]
Q95XX04.6e-5871.79Ubiquitin-conjugating enzyme E2 13 OS=Caenorhabditis elegans OX=6239 GN=ubc-13 P... [more]
Q9EQX96.0e-5869.38Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV... [more]
BLAST of Cp4.1LG14g03380 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG5597575.12.08e-9285.28hypothetical protein H5410_038807 [Solanum commersonii][more]
XP_012464625.14.68e-9285.89PREDICTED: ubiquitin-conjugating enzyme E2 36-like isoform X1 [Gossypium raimond... [more]
XP_038685184.17.96e-9285.89ubiquitin-conjugating enzyme E2 36-like [Tripterygium wilfordii][more]
VDD07427.11.42e-9183.64unnamed protein product [Brassica rapa][more]
PPS01919.12.24e-9184.52hypothetical protein GOBAR_AA18745 [Gossypium barbadense][more]
BLAST of Cp4.1LG14g03380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
F6H2P36.13e-9487.73UBC core domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_19s0014g014... [more]
A0A5D2HYZ72.27e-9285.89UBC core domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D13... [more]
A0A1U8KU942.27e-9285.89ubiquitin-conjugating enzyme E2 36-like isoform X1 OS=Gossypium hirsutum OX=3635... [more]
A0A0D2W7082.27e-9285.89UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_013G1... [more]
A0A5D2S4Z62.27e-9285.89UBC core domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D13... [more]
BLAST of Cp4.1LG14g03380 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G78870.22.3e-7385.28ubiquitin-conjugating enzyme 35 [more]
AT1G16890.23.9e-7384.66ubiquitin-conjugating enzyme 36 [more]
AT1G78870.15.7e-7284.76ubiquitin-conjugating enzyme 35 [more]
AT1G16890.31.8e-7079.65ubiquitin-conjugating enzyme 36 [more]
AT1G78870.38.3e-5587.80ubiquitin-conjugating enzyme 35 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 8..166
e-value: 5.0E-56
score: 202.1
NoneNo IPR availablePANTHERPTHR24068:SF351UBIQUITIN-CONJUGATING ENZYME E2 35coord: 70..164
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 2..70
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 70..164
NoneNo IPR availablePANTHERPTHR24068:SF351UBIQUITIN-CONJUGATING ENZYME E2 35coord: 2..70
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..71
e-value: 5.5E-24
score: 86.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 72..176
e-value: 1.8E-39
score: 136.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 70..161
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 6..71
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 70..155
e-value: 1.0E-32
score: 112.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 5..166
score: 47.413937
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..161
e-value: 4.36861E-56
score: 172.387
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 93..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g03380.1Cp4.1LG14g03380.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006301 postreplication repair
biological_process GO:0070534 protein K63-linked ubiquitination
biological_process GO:0010039 response to iron ion
biological_process GO:0010053 root epidermal cell differentiation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0031372 UBC13-MMS2 complex
molecular_function GO:0016746 acyltransferase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0061631 ubiquitin conjugating enzyme activity