Cp4.1LG14g03030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG14g03030
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG14: 2568335 .. 2572656 (+)
RNA-Seq ExpressionCp4.1LG14g03030
SyntenyCp4.1LG14g03030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGAGAAGTAATAGGGTGAAAGTAAAAGAAAAAATGTGAATTTAATAAACATCTTCATCACTTCTCGAAGAAACTTCGCCTGAAATCAAGCATCGAATCTCCAATAACAGATTTCTTGAGGAAGAAAAGGGATAGATTGCAGCAATGGCGGATTCAGTGCTGGGAATTGTTGCAGCTGCAGCCATCACCTTCTACGCCGCAAGCTTATCAGAGCATCGAGAGGTACCATTCTTTCTTCTTTGTTTTCCTGTCATCTCAAGCCCTAGCTTTCGTCTTGCAGTCATATACAGGCTGCTAATGCTTTCTATGCTTTTACTTTAAGTGTCTGATTTCAATCTCTATTTGTTTTGGCATATGTTCGGTACTTTTTAGACCTATAATTATTGAACCAATTAATGGCTTTTAAATTGGGGGAATGTGAAGAAATCATTCAGAGATTTGGATGAACGGAGGATGAGAAAGGAGGGTTTAAGATGACTTCAAGATCACGAGAGAGTCGAGCAAGAAGGAAGGCTAAGAACTTAAAAGAACTTTTTATTCAACATTACCTTAAGAATCTAGCTGTTGAGTGACATTTCTCACAGCATCCAAGGCTTTTCTACATACTTTGGGGGGGTATCTAGTGTTAAGATTGCAGACATATTACTCATGTCTTATACGCAAGCTGATCAACTTTTCGCCACCAATCAAGCATTTGGTGATCATGGAGAAGGATTTCTTTGTTCCATGAAAGTAGTCAGGATCTGGTACCTTCAGGCTGTTCGTTGTAACTATTTGGAGCTACTTTTGAGCCTTCAATTCCTTCACTCTCTCTTCAGTAGCCTTCAGTGCCTCCCCATAAATGCTGATTAACTGGAAACAAAAACAGTGGATCAAATTCCAGCAGAAGATGTGTTTAAATTGAACCATAGTCTTATTGTTAGCTTTTAGGGATACCTCATCTACTTCTCGAGGGGAGATGATAAATGGTGGAGACATCATTATAGTATCCCCTGCAACACGTACTAGCATACCATTTTCCTGACATTCGGTTCCAAAATATGCACCAACTCCTGTTTATATCAGGCAGATAACAAGCTGTAAGCATAAGTATGACCCTGCCAGATTAAGATGAAGATCGACCTAGTTCATGGGGTTGTGATTTTAGGATTAAGTTGATAAAAAATTATCGAAGATTTAGGCTACTGTGCCTTGATTTAATTTGATCAAAATTCCCATTTAGAGGCATCGCTAACAATGGGAATTACATAAAACATACCCCATTCAGGAGGGAACGGATCATTTGGTGATTTATTGTCTGCAAACTCTGTGCTTAAGATCAAGCCAGTCCCCCGTATCTGCAAAATAATAGTGCTGAAGAACTGAAGATGCCCCAGATTCGCAAGCCAAACTTAATTACGTGAGCAACCCTCTTACCTCTCCAACGATAGGGCTATCAGAGTAAGCTCTTAGGCCATCTTGAAATCTTGAGGAGATGCTATTTACTTGCTCCACTATATTCCTTTCCCTAGAACAAAAGAAAATGAACTTACCAATAAGTTGGTAATTTTTCATATATGCATTGCATCCTATATGTGAGTTTGTATCATAAAAATGTGCATTTATTCTCTTTTACTTAGAACCACTATTTCATCCTCGAACAAGGACACCAATTGAATCAAATAGAAAGTAGGTCCATCTTGATGAACTTCCAGTTTTCTTGTATAAGAAAATTATAGATCTTTGAAACGTTTGTCCACTTTTAAGGTTTCTTTGTCATTCTCAATAAAAAAGAAATAGAACTCAGAAAGCACAGGAGTAGGGGAACATACTTGTATATTTTGAGTGTTTCAATTGCGACAGCACACGAGACTGGGTGTCCAGAATAAGTAAATCCATGAGCAAAGGAACCTGGAAGTATTATTATTGAACAAAACTTATTGGTAAGCTGCACTGAAGATTATTAACAGTGATTAACTAGGTAAGCTAGGTACAATAATATACCAAGCTTGTTGCTTTGAGAGTGAATCACATCAGAGATTTCAGGGCTCACGAGAACAGCTCCAATAGCCATGTATCCCGAGGAAAGTGCCTACAGAATCCAGTCCACTATCAGGCTCAATAAAAACAATGAAAAGCCAAGACTAAACAAGATATCTACTAAAGTTGAATCTGTTCAAACTTCACCTTTGCAAGAGATACAAGGTCCGGTTTAATATTGTATTTATCGCATCCAAACATTGTCCCTAGTCTTCCAAAGGCACAGATTACCTATAAAAAATGTTGAAGACAGTTCCTGGTTTACATTGCAATTATTATTGTAAAAATGCAAAATGGTGAAGAAAAAAATTGCAATTAGCAAGTACCTCGTCGGCAATGAAAAGTATATCATACTTCTTGAGCACAGGTTGGATCTGCAACATAAATAAGACATACTTCATTCTTCCCTTCATGTTCTCCTTATTTTTGTTATTAGAAAGTATTTGCATCAATAATTAGAACATTAATAACAAAGGCAAGAAATTGAATCATGATTCATATGTAGACTGTTAGTTCATATGTTGGTCCGTCTCTAGTGCTAGACTTTGATGACTTTTAAATATTTAGATGCCTTTTACTTTTCCTTGCAGGTATTATAGAAATTGACTTGTACTGCGGATGTGAAGGCTTAGCATCGAAGGAGAGAACATATGGGATATCTGTGACAAACAGTAAATAGTTGGATCTGTTTCACCATTTCAAGTTGTACCCTAAAGACGAGTCTGTTCTGGAAACAACAAAGAAACCTGGTGCGTAACCATTTTTTTGCTCCAAAGCTTTTGGATAATTCACCTAATCTCGTCAACAAGATCATGACATAATATTGAAGGAGAAAACAACCATGATGGACCAACAACCTAAATTTTCAAAAACCAGCCGTTGGCTTAGCATTCACGATTAGATAGTAAGGTTGGAATTTATTCATGTAATTGCGTCAGTAAGCCAATCCTCATAGTTTAGGTTAATTTAAGAAATAATAATTAGACTTCTCCCTAAATATCCTTGCAGTTGAAGTTTTTCTTTCTTCGTTCTTTTTTGTATTTTATTTCTTTATTATTATTAATCAAAGTACTAGTTTATACAATCCTAATTTTGCTATCTGTAATTTTACTATCTCATCTATGCTCCTTCAATATTATGTAATCATCTTATCTAGAAGGAAAGTTAAAGCAAACAACTAGCCAACTGAATATAAAAAGCGTAAAAAAGAAAAATGAAACACGAGAGCATAATTAGAAAAAGAAATAAAGAATAGGAAGCTAAACAAGGAAAGTCTTACTGTTGCATACTTCAAAATTTCATGATACAAACAACTTACCTTTTCAAAATAAGTAGCTGGTGGAGGAATCACACCACCAGCACCCATGACAGGTTCGGCGATGAACGCAGCAATCTGAAGTGGAAAACCGGACACGGGAAAAGGGTCAATTATAGTTTCATGCCATATTCTAATTCAAAGTAGAGTATTCAAGTTTACTGTCTCTGGTCCCTCCTTGAGTATAAGGTCTTCCAAGTTTTTGGCTAATCTGGTTGAGAACTCTTCCTCTGTCTCACCTGACACAAGGATGTTTTCAAGTTAATGGCTGAAAAAAAATCAAAGAAATTGAACTACTGTATATTGAAGCATAGATCAGAACCTGGAAGATGGTAACGCCAGTAATGTGGACAATCAGTGTGCAGAACGAATGGAGCAGGAATGTCAAACTTCTGGTGCATTGCTGGAAGGCTGTGAAAAAATATATTCGAGTAACTATTTCTTTTAACAAGAGACATGAGGTATATTTTCTTTTCATTTAACTTACCCAGTAAGACTGGCTGATATTAATGTTGAACCATGATATCTGTTGGATAGAAGGGTGCCATGAAAAGAAAATTACTTGAACAGAACAGCAAAGGAAATTATACGAATGAACATTAGCCAAGTGATTTGAGCTTACGCCTTTGAGCGAGCTATGAACTTCTTCTTATCTGGTCTTCCAAGTGCATTGTTATAGTACCATACCAGTTTGACCTATTACATGTAATTAAGCACATTAAATGGTGCTCAAAATGAATTAATTGGTTGCCTTTGCTGCAAAGATTTTGTAATTTGAGCCCCCCTCAATATATTACTCTGTTTTCGAAGTTATATATATGAAGAAATTCTCATATCGATATTGTTTCAGCCATAATATAAAGTTCTTGTCTGGAGTAGAAAGAACCTGAGTATCATTAGCTTCTGAACCACTGTTTGTAAAAAAGACTTTCCCCATTTTTCTAGCTGTGAACATTTCAAGCAGTTCCTTTGCCAGCTCCTATCATAC

mRNA sequence

TAGAGAAGTAATAGGGTGAAAGTAAAAGAAAAAATGTGAATTTAATAAACATCTTCATCACTTCTCGAAGAAACTTCGCCTGAAATCAAGCATCGAATCTCCAATAACAGATTTCTTGAGGAAGAAAAGGGATAGATTGCAGCAATGGCGGATTCAGTGCTGGGAATTGTTGCAGCTGCAGCCATCACCTTCTACGCCGCAAGCTTATCAGAGCATCGAGAGGTATTATAGAAATTGACTTGTACTGCGGATGTGAAGGCTTAGCATCGAAGGAGAGAACATATGGGATATCTGTGACAAACAGTAAATAGTTGGATCTGTTTCACCATTTCAAGTTGTACCCTAAAGACGAGTCTGTTCTGGAAACAACAAAGAAACCTGCTGGTGGAGGAATCACACCACCAGCACCCATGACAGGTTCGGCGATGAACGCAGCAATCTGAAGTGGAAAACCGGACACGGGAAAAGGGTCAATTATAGTTTCATGCCATATTCTAATTCAAAGTAGAGTATTCAAGTTTACTGTCTCTGGTCCCTCCTTGAGTATAAGGTCTTCCAAGTTTTTGGCTAATCTGGTTGAGAACTCTTCCTCTGTCTCACCTGACACAAGGATGTTTTCAAGTTAATGGCTGAAAAAAAATCAAAGAAATTGAACTACTGTATATTGAAGCATAGATCAGAACCTGGAAGATGGTAACGCCAGTAATGTGGACAATCAGTGTGCAGAACGAATGGAGCAGGAATGTCAAACTTCTGGTGCATTGCTGGAAGGCTGTGAAAAAATATATTCGAGTAACTATTTCTTTTAACAAGAGACATGAGGTATATTTTCTTTTCATTTAACTTACCCAGTAAGACTGGCTGATATTAATGTTGAACCATGATATCTGTTGGATAGAAGGGTGCCATGAAAAGAAAATTACTTGAACAGAACAGCAAAGGAAATTATACGAATGAACATTAGCCAAGTGATTTGAGCTTACGCCTTTGAGCGAGCTATGAACTTCTTCTTATCTGGTCTTCCAAGTGCATTGTTATAGTACCATACCAGTTTGACCTATTACATGTAATTAAGCACATTAAATGGTGCTCAAAATGAATTAATTGGTTGCCTTTGCTGCAAAGATTTTGTAATTTGAGCCCCCCTCAATATATTACTCTGTTTTCGAAGTTATATATATGAAGAAATTCTCATATCGATATTGTTTCAGCCATAATATAAAGTTCTTGTCTGGAGTAGAAAGAACCTGAGTATCATTAGCTTCTGAACCACTGTTTGTAAAAAAGACTTTCCCCATTTTTCTAGCTGTGAACATTTCAAGCAGTTCCTTTGCCAGCTCCTATCATAC

Coding sequence (CDS)

ATGGCGGATTCAGTGCTGGGAATTGTTGCAGCTGCAGCCATCACCTTCTACGCCGCAAGCTTATCAGAGCATCGAGAGGTATTATAG

Protein sequence

MADSVLGIVAAAAITFYAASLSEHREVL
Homology
[Close]
BLAST of Cp4.1LG14g03030 vs. NCBI nr
Match: XP_022931326.1 (uncharacterized protein LOC111437549 [Cucurbita moschata])

HSP 1 Score: 47.0 bits (110), Expect = 5.20e-05
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0 

Query: 1  MADSVLGIVAAAAITFYAASLSEHRE 26
          MADSVLGIVAAAAITFYA SLSEHRE
Sbjct: 30 MADSVLGIVAAAAITFYAVSLSEHRE 55

[Close]
BLAST of Cp4.1LG14g03030 vs. ExPASy TrEMBL
Match: A0A6J1ETD3 (uncharacterized protein LOC111437549 OS=Cucurbita moschata OX=3662 GN=LOC111437549 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.52e-05
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0 

Query: 1  MADSVLGIVAAAAITFYAASLSEHRE 26
          MADSVLGIVAAAAITFYA SLSEHRE
Sbjct: 30 MADSVLGIVAAAAITFYAVSLSEHRE 55

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g03030 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG14g03030 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022931326.15.20e-0596.15uncharacterized protein LOC111437549 [Cucurbita moschata][more]
BLAST of Cp4.1LG14g03030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ETD32.52e-0596.15uncharacterized protein LOC111437549 OS=Cucurbita moschata OX=3662 GN=LOC1114375... [more]
BLAST of Cp4.1LG14g03030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g03030.1Cp4.1LG14g03030.1mRNA