Cp4.1LG14g02510 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g02510
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG14: 2899571 .. 2899978 (+)
RNA-Seq Expression	Cp4.1LG14g02510
Synteny	Cp4.1LG14g02510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGCAATTTGATTTCAAGCTTGAACAAAAAGTTGCAGGCGGTTGATATCAGTAATCGCTGCAGACGAACGAAGAAGACGACTAACGTATACAGAGGCGATATGAGCAAGAAGAAGCAGCCGCAGTTGCCGTCGCAGGGGAAGCCGGAGATCGAGAAAGTGAAGAAGAGAGTGAGATTTGCAGATACGGAACCGGTGATAATCGCCATTGACAGAGAGGAGCGGAGTACAGAGGAGGAAACAGAGAAGAAAGTGGTTAGAATTACGGTGAAATTGACGAAGCAAGAAGCGAATCGGATGCTTTCGAGATGCTCCAATGGCGGCGTTCTAGAATTCGGAGATGTTGCGAGTGAGCTCATGCGGATTCCTGCGGCTCGCGTTAGCTCTTCTATGGTAGTCAATTGA

mRNA sequence

ATGATCGGCAATTTGATTTCAAGCTTGAACAAAAAGTTGCAGGCGGTTGATATCAGTAATCGCTGCAGACGAACGAAGAAGACGACTAACGTATACAGAGGCGATATGAGCAAGAAGAAGCAGCCGCAGTTGCCGTCGCAGGGGAAGCCGGAGATCGAGAAAGTGAAGAAGAGAGTGAGATTTGCAGATACGGAACCGGTGATAATCGCCATTGACAGAGAGGAGCGGAGTACAGAGGAGGAAACAGAGAAGAAAGTGGTTAGAATTACGGTGAAATTGACGAAGCAAGAAGCGAATCGGATGCTTTCGAGATGCTCCAATGGCGGCGTTCTAGAATTCGGAGATGTTGCGAGTGAGCTCATGCGGATTCCTGCGGCTCGCGTTAGCTCTTCTATGGTAGTCAATTGA

Coding sequence (CDS)

ATGATCGGCAATTTGATTTCAAGCTTGAACAAAAAGTTGCAGGCGGTTGATATCAGTAATCGCTGCAGACGAACGAAGAAGACGACTAACGTATACAGAGGCGATATGAGCAAGAAGAAGCAGCCGCAGTTGCCGTCGCAGGGGAAGCCGGAGATCGAGAAAGTGAAGAAGAGAGTGAGATTTGCAGATACGGAACCGGTGATAATCGCCATTGACAGAGAGGAGCGGAGTACAGAGGAGGAAACAGAGAAGAAAGTGGTTAGAATTACGGTGAAATTGACGAAGCAAGAAGCGAATCGGATGCTTTCGAGATGCTCCAATGGCGGCGTTCTAGAATTCGGAGATGTTGCGAGTGAGCTCATGCGGATTCCTGCGGCTCGCGTTAGCTCTTCTATGGTAGTCAATTGA

Protein sequence

MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASELMRIPAARVSSSMVVN

Homology

[Close]

BLAST of Cp4.1LG14g02510 vs. NCBI nr
Match: XP_023552096.1 (uncharacterized protein LOC111809864 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244 bits (623), Expect = 6.90e-81
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR 60
           MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR
Sbjct: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR 60

Query: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASEL 120
           FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASEL
Sbjct: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASEL 120

Query: 121 MRIPAARVSSSM 132
           MRIPAARVSSSM
Sbjct: 121 MRIPAARVSSSM 132

[Close]

BLAST of Cp4.1LG14g02510 vs. NCBI nr
Match: KAG7015140.1 (hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243 bits (620), Expect = 1.57e-80
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR 60
           MIGNLISSLNKKLQAV+ISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR 60

Query: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASEL 120
           FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCS+GGVLEF DVASEL
Sbjct: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFRDVASEL 120

Query: 121 MRIPAARVSSSMVVN 135
           MRIPAARVSSSMVVN
Sbjct: 121 MRIPAARVSSSMVVN 135

[Close]

BLAST of Cp4.1LG14g02510 vs. NCBI nr
Match: XP_023522331.1 (uncharacterized protein LOC111786247 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243 bits (619), Expect = 2.81e-80
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR 60
           MIGNLISSLNKKLQAV+ISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR 60

Query: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASEL 120
           FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASEL
Sbjct: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASEL 120

Query: 121 MRIPAARVSSSM 132
           MRIPAARVSSSM
Sbjct: 121 MRIPAARVSSSM 132

[Close]

BLAST of Cp4.1LG14g02510 vs. NCBI nr
Match: KAG6577140.1 (hypothetical protein SDJN03_24714, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241 bits (615), Expect = 9.06e-80
Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR 60
           MIGNLISSLNKKLQAV+ISNRCRRTKKTTNVYRGDMSKKKQPQLP QGKPEIEKVKKRVR
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPPQGKPEIEKVKKRVR 60

Query: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASEL 120
           FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCS+GGVLEF DVASEL
Sbjct: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFRDVASEL 120

Query: 121 MRIPAARVSSSMVVN 135
           MRIPAARVSSSMVVN
Sbjct: 121 MRIPAARVSSSMVVN 135

[Close]

BLAST of Cp4.1LG14g02510 vs. NCBI nr
Match: XP_022931429.1 (uncharacterized protein LOC111437608 [Cucurbita moschata])

HSP 1 Score: 241 bits (614), Expect = 2.13e-79
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR 60
           MIGNLISSLNKKLQAV+ISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR 60

Query: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASEL 120
           FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCS+GGVLEFGDVASEL
Sbjct: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFGDVASEL 120

Query: 121 MRIPAARVSSSM 132
           MRIPAARVSSSM
Sbjct: 121 MRIPAARVSSSM 132

[Close]

BLAST of Cp4.1LG14g02510 vs. ExPASy TrEMBL
Match: A0A6J1EU86 (uncharacterized protein LOC111437608 OS=Cucurbita moschata OX=3662 GN=LOC111437608 PE=4 SV=1)

HSP 1 Score: 241 bits (614), Expect = 1.03e-79
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR 60
           MIGNLISSLNKKLQAV+ISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVR 60

Query: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASEL 120
           FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCS+GGVLEFGDVASEL
Sbjct: 61  FADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFGDVASEL 120

Query: 121 MRIPAARVSSSM 132
           MRIPAARVSSSM
Sbjct: 121 MRIPAARVSSSM 132

[Close]

BLAST of Cp4.1LG14g02510 vs. ExPASy TrEMBL
Match: A0A6J1JBA8 (uncharacterized protein LOC111483436 OS=Cucurbita maxima OX=3661 GN=LOC111483436 PE=4 SV=1)

HSP 1 Score: 230 bits (587), Expect = 1.10e-75
Identity = 128/134 (95.52%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPS--QGKPEIEKVKKR 60
           MIGNLISSLNKKLQAV+ISNRCRRTKKTTNVYR DMSKKKQPQ PS  QGKPEIEKVKKR
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRRDMSKKKQPQSPSPSQGKPEIEKVKKR 60

Query: 61  VRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVAS 120
           VRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCS+GGVLEFGDVAS
Sbjct: 61  VRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFGDVAS 120

Query: 121 ELMRIPAARVSSSM 132
           ELMRIPAARVSSSM
Sbjct: 121 ELMRIPAARVSSSM 134

[Close]

BLAST of Cp4.1LG14g02510 vs. ExPASy TrEMBL
Match: A0A5D3D246 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003900 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 6.45e-58
Identity = 106/140 (75.71%), Postives = 114/140 (81.43%), Query Frame = 0


Query: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKV 60
           MI NLISSLNKKLQAV+ISNRC+RTKKTT VYR D++KKK     S   P     EI+KV
Sbjct: 1   MISNLISSLNKKLQAVEISNRCKRTKKTTYVYRDDLTKKKHSPPLSSSSPQHQPAEIKKV 60

Query: 61  KKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGD 120
           KKRVRFADTEPVIIAI  +    EEETEKKVVRITVKLTKQEANRMLSRCSN GVLEFGD
Sbjct: 61  KKRVRFADTEPVIIAISTDREEEEEETEKKVVRITVKLTKQEANRMLSRCSNDGVLEFGD 120

Query: 121 VASELMRIPAARVSSSMVVN 135
           VASEL+RIP  RVSSS+V N
Sbjct: 121 VASELLRIPPTRVSSSLVAN 140

[Close]

BLAST of Cp4.1LG14g02510 vs. ExPASy TrEMBL
Match: A0A1S3BS40 (uncharacterized protein LOC103493098 OS=Cucumis melo OX=3656 GN=LOC103493098 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 6.45e-58
Identity = 106/140 (75.71%), Postives = 114/140 (81.43%), Query Frame = 0


Query: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKV 60
           MI NLISSLNKKLQAV+ISNRC+RTKKTT VYR D++KKK     S   P     EI+KV
Sbjct: 1   MISNLISSLNKKLQAVEISNRCKRTKKTTYVYRDDLTKKKHSPPLSSSSPQHQPAEIKKV 60

Query: 61  KKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGD 120
           KKRVRFADTEPVIIAI  +    EEETEKKVVRITVKLTKQEANRMLSRCSN GVLEFGD
Sbjct: 61  KKRVRFADTEPVIIAISTDREEEEEETEKKVVRITVKLTKQEANRMLSRCSNDGVLEFGD 120

Query: 121 VASELMRIPAARVSSSMVVN 135
           VASEL+RIP  RVSSS+V N
Sbjct: 121 VASELLRIPPTRVSSSLVAN 140

[Close]

BLAST of Cp4.1LG14g02510 vs. ExPASy TrEMBL
Match: A0A0A0KYE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052080 PE=4 SV=1)

HSP 1 Score: 180 bits (457), Expect = 6.56e-56
Identity = 106/142 (74.65%), Postives = 114/142 (80.28%), Query Frame = 0


Query: 1   MIGNLISSLNKKLQAVDISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKV 60
           MI NLISSLNKKLQAV+IS+RC+RTKKT  VYR +++KK      S   P     EI+KV
Sbjct: 1   MISNLISSLNKKLQAVEISSRCKRTKKTAYVYRDNLTKKNHSPPSSSSSPQHQPEEIKKV 60

Query: 61  KKRVRFADTEPVIIAI--DREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEF 120
           KKRVRFADTEPVIIAI  DREE   E ETEKKVVRITVKLTKQEANRMLSRCSNGGVLEF
Sbjct: 61  KKRVRFADTEPVIIAISTDREEEELEVETEKKVVRITVKLTKQEANRMLSRCSNGGVLEF 120

Query: 121 GDVASELMRIPAARVSSSMVVN 135
           GDVASELMRIP  RV SS+V N
Sbjct: 121 GDVASELMRIPPTRVRSSLVAN 142

[Close]

BLAST of Cp4.1LG14g02510 vs. TAIR 10
Match: AT4G23880.1 (unknown protein; Has 73 Blast hits to 69 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2; Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 4.5e-04
Identity = 35/128 (27.34%), Postives = 64/128 (50.00%), Query Frame = 0


Query: 21  RCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----------EIEKVKKRVRFAD---TEP 80
           R +R  K+     G+  + +Q + P   KP           +I + KK V F D    +P
Sbjct: 55  RAKRIDKSLRFEEGEEEEDEQNKKP-LAKPRKVVRFQLENNKIFEPKKTVSFDDDHELKP 114

Query: 81  VIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSNGGVLEFGDVASELMRIPAA 135
               ++ +E     E +++VVR+ +K+TK EA R+LS+C N  VL+   +  ++  +P  
Sbjct: 115 KENPLEEKESLKMVEGKEEVVRVKIKMTKHEAQRLLSKCKNDSVLKLEHLMDQIAHVPVH 174

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g02510 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG14g02510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552096.1	6.90e-81	100.00	uncharacterized protein LOC111809864 [Cucurbita pepo subsp. pepo]	[more]
KAG7015140.1	1.57e-80	97.78	hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023522331.1	2.81e-80	99.24	uncharacterized protein LOC111786247 [Cucurbita pepo subsp. pepo]	[more]
KAG6577140.1	9.06e-80	97.04	hypothetical protein SDJN03_24714, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022931429.1	2.13e-79	98.48	uncharacterized protein LOC111437608 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG14g02510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EU86	1.03e-79	98.48	uncharacterized protein LOC111437608 OS=Cucurbita moschata OX=3662 GN=LOC1114376...	[more]
A0A6J1JBA8	1.10e-75	95.52	uncharacterized protein LOC111483436 OS=Cucurbita maxima OX=3661 GN=LOC111483436...	[more]
A0A5D3D246	6.45e-58	75.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BS40	6.45e-58	75.71	uncharacterized protein LOC103493098 OS=Cucumis melo OX=3656 GN=LOC103493098 PE=...	[more]
A0A0A0KYE1	6.56e-56	74.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052080 PE=4 SV=1	[more]

BLAST of Cp4.1LG14g02510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23880.1	4.5e-04	27.34	unknown protein; Has 73 Blast hits to 69 proteins in 22 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..49
None	No IPR available	PANTHER	PTHR36782	BNAC03G62080D PROTEIN	coord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g02510.1	Cp4.1LG14g02510.1	mRNA