Cp4.1LG14g02420 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g02420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ribonucleases P/MRP protein subunit POP1
Location	Cp4.1LG14: 3008354 .. 3014256 (+)
RNA-Seq Expression	Cp4.1LG14g02420
Synteny	Cp4.1LG14g02420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAATTAAATTAAATAAATAAAAAGAAATAGAAGCCCTATGCAGTTTCATCTTCCTCCCACCGCCCCCGCCCGCCTACTGTCTTCCACTCTTAACGGTGCCGGTGCCGGCGCCGCCGCTTCCCTCTAGCAGTTCGCAGTGAGTTTTCCACTATCTCTTTACAGGTATGCTTCCAAAATCTATATCTTCCTTTCTTCTTTCGTTCCGTTTTCCCGTCTTTTCTTCCATCTCTCATGCTCGTTAAACCCTGACGTTGTTAGTTCCATCTCTTCTGTCAGGTTTCCACATAAACAGTGATAATGCTTCTTCTCTATTGCCTTTTTTTCTTCTTTGATGGTTTTTACTTTCTCTGTTGGTGCTCTGGGCTGCTTCTGCTATCGTGATTTTGATTTCTCTGTTGATTTTGTTTTTTTATATGGTTTATACACGATTCTCTGTTTCCTTTTGCTTTTTGCAACCATCTCGGTGCTTAATGCACATGTTGAATCAGAATGAGCATATTATAAGAGAGAATGGGATTTTCTGTTGGGCTTGATGTTTTTTGGTTCTGGGTTTGGGTTTTGGCGAATCCGAAGTAGCTGAAATAATAATTGGTGTCGAGTGGAAAACGTGTAATCCAACGGCTTATAATCTTTTCTCTGTCCAATGTCTATCCAAAACCCTGGTAGTACCATTGCATAAAGCTTTGTTATTTTAGGGAAACACTTCTCAATTGATGTTAGCCTCAGTTCCGGGCAGAAGAGTATAGAATGTTCATTCATCCTTGGATGGGGTTCATATTATTATAGGTTATGGTTTCCTTTTCTGATGGTTGTATGGAATTAAAGCTTTTTTAATAATTGTTTTCTTGTAGATTTGCCCCTGTACTATTTGATCAAACTTGTAAATATCAAGATCTTTTTGAAAGAGTTTGAGCCAAGGAGAAGAATTGGAGCACGTGAAACACTTCTTTCTGATATAATAGCGTTGAAAGTTGAAGAACTTTTGCTGAAATATCAGGATGGGGGAGAAAGTCGTCACTGCTAGTGGTAAGGACAGGTCAATTCCCAGAAATCTCAATCTGCATAAGTTTGTAGACCCTCGGGCGTCTGAGCTGGAAGCTCTTCAATCCATCGTTTTGAATCGGATGAATAGTAATACTTGTGATCAAAGGTCGAAGAGGAGAAGAACTTCTTCTTATTTAACTAATGCTTCTAGGAAAAGGAAAAATAAGAAAATGAAATTGGATACCACCCATCTGGATTTAGCGAAAAACGAGAAGAAGGCTTCTCGGAAAATACGTCGCAGGGCTGAGCTTAAAATGAATCATGGCATTGGATTTTCTACTTCTGGGGATGGTACCAAAAGGCTTAGAACACATGTTTGGCATGCTAAGCGTTTCACTATGACTAAGCTTTGGGGTTTTCATCTCCCTCTAGGGTTGCAGGGCAGGTAATACTTTACTTTTTCTTGTTTAATATTCTTTAATGTCCTGAAAGAAGGAAAAGGGAAATATAATTATTGTAATTGCTGATCTTAAAATGTGAAATTTTTGAAAGAGTTCTTGAGTTGGAATCCTCGAAGATCGGAAGTTGGACCATTAACCTATTTGTTAATGTAGTTTTTTTCTTCTAGAATTTTGTTTATGCAAAGGACAATTGCAGTTTGAGACTTTTATGTGTTAGAACTAAAATCGGTCTTCTGTTATGCAGAGGTAAGGGTTCTAGAGCTCTTCTGAAATGGTACAATGATGGAGTGCTTATACATGATGCTAGTTATTACGTTCCCGTCCAGTTGGAGGGTCCAGAGGTGGGAAGCCTCTTTCCTTTGTGCCTTTCAATTTTTCATGTGAATAGGACTTGTTTATNTGTGCATAAGTTTGTAGACCCTCGGGCGTCTGAGCTTGAAGCTCTTCAATCCATCGTTTTGAATCGGATGAATAGTAATACTTGTGATCAAAGGTCGAAGAGGAGAAGAACTTCTTCTTATTTAACTAATGCTTCTAGGAAAAGGAAAAATAAGAAAATGAAATTGGATACCACCCATCTGGATTTAGCGAAAAACGAGAAGAAGGCTTCTCGGAAAATACGTCGCAGGGCTGAGCTTAAAATGAATCATGGCATTGGATTTTCTACTTCTGGGGATGGTACCAAAAGGCTTAGAACACATGTTTGGCATGCTAAGCGTTTCACTATGACTAAGCTTTGGGGTTTTCATCTCCCTCTAGGGTTGCAGGGCAGGTAATACTTTACTTTTTCTTGTTTAATATTCTTTAATGTCCTGAAAGAAGGAAAAGGGAAATATAATTATTGTAATTGCTGATCTTAAAATGTGAAATTTTTGAAAGAGTTCTTGAGTTGGAATCCTCGAAGATCGGAAGTTGGACCATTAACCTATTTGTTAATGTAGTTTTTTTCTTCTAGAATTTTGTTTATGCAAAGGACAATTGCAGTTTGAGACTTTTATGTGTTAGAACTAAAATCGGTCTTCTGTTATGCAGAGGTAAGGGTTCTAGAGCTCTTCTGAAATGGTACAATGATGGAGTGCTTATACATGATGCTAGTTATTACGTTCCCGTCCAGTTGGAGGGTCCAGAGGTGGGAAGCCTCTTTCCTTTGTGCCTTTCAATTTTTCATGTGAATAGGACTTGTTTATAGTTTTAAATAATTTTTGTTTTTCTTGATCATTTGTTTTCTAAAGGCCGTTCTCATGTGCCTACAGGACTCTCTGATTTCGGCTCTAGGAATGGTGTTGGAACCATCCATAGTATCTCATTCTCAAGACATTTCTCATGCAATTATTTCTGGTGTTATTTATGGTAGAGCAATTGTATGTCATCTGGTTACTTAGTATTACTAATTTAATGATGCAAGTAGTTGGATGTGTAATTACTTAGACTTTGTTCTTCTGCAGCTTCATGATTCCAGGACCCCGGGTGCTAATGCAATTGCTCCTGTAACATATATGTGGCGTCCATGTCCTTGTCGAAAAAAGGAAATCAATGTTAATAATCACAATAGCAGTGTATTTAAGACAATAGATGGCGTAGACTCGTCTTCTACTTCACGCCAGCTTTGGGTTTGGTTACATCCTTCTGCCTCTAGTGAAGGATGTGATGCTCTAAAATTCGCTTGCCAAAAGGAGGTAAATATTATGTTCATGTCCATCAGATTATGACCAGTTGGACCTCCTTTTTGTAGCCCTTTGATCTTGTGGGGACATCTCATCTCCCCTTACCCTCTTTTTTTATGGTCTTTCTCTAGTCTATGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCTGCAAAACATTGAGTGAATTTTTTAAATTTGTACCCTAGAAGGTTTGTCGACGATAGGAATGAGAATAAAACATTCTCTAGATCACTACAAGTGGAGGGGCCAACTGAAAATCTCCCCACTTCCCTAAATGAGCTCAGCTCCAAGTAAAGTTCTAATTTTCTCTTGCAAATTTTTATGTTTAGAGTGATCATCTAATTTTCTCTTGCAAAATTTTCAAGCTTGATACTATTATCTTTTCAATTAAAAAAAGCTGAAAGTTCACTTAGTATGTTGAAAAGATTTTTGCTTTACAATTAGTTACTGAGGTCTTGTCTTTTCTTCAGATGGATGAGAAAAATATCCCAATTTACTGTTCTTCATTAGAAGGGCAACTTGCAAAATTGGAAGTATTTGGCTCAAATGCATCCCAGCTTCTTGAAAAGTTTTTGCAGCCTATGACACGGTAGAATAACATCTTGTCTTACTGTCATAGAAGAATGCTATCCATAGTGATTAATAACTAACTTTACTCCTGCAGTGCTTCACAGAATCTTTGGCAGTTGAAAAAGCATTCCACTGGGGGTCCTGATGGTAACTCTCATTTGAAGACATTGTTCAATCGCGAAAACGAGAATTACATTCCTTCATATGGAATTGCATCCATCGCTTTCAAAGATCCTCGAATGNATTCTCATTTGAAGACATTGTTCAATCGCGAAAACGAGAATTACATTCCATCATATGGAATTGCATCCATCGCTTTCAAAGATCCTCGAATGCTACCGAATGAAAAGACTACAGACGTTCAAGATTCAACTTCAATGCATAACCCTGCTGATTCCTCAGCAATTCTTTCTGAAGATAAAGAAATTTCAAAAAGTAATGAAATGTTATCATCATCTTTGGATTCAAGAATTGACGAAAATGGTTTTTTACTTGAGAACAAGGAATTGTGGGATGCCAAAACTGGAATGAGGGCCCCTGTGGAAGATACTGTTATTTGTGCAGCAAGACATCATACACGGATGAATCGCTTTTGCCTTGATGAACCGTCTGCAGAGATGGCGAAAGATCTGAGCTCATTGCAAAGCTCAAGTGCTTGTCCCACATTGCTTTTAAATGAGAATGACGAAAGCAGTACTCTTTTAAGGTAACCTCTATTTCTTGATTCTGTGAATTCCACTGACATTGTTATTTAGTGTAAGTAAGGAGTTTGGGTTATTTTTCTGATTTCTGGTTGCTCAATGTCTACATGTTTGGTTTTTCTGATGATTAAACTAGTGCATTGTTTTGCCCTCTTATTCTATATGATTGTTCTCATTGAGTGTATATTCTCTTTGAAAACTTGTACTCAAAATCATATGAAGGGTTCTATTTTACTCGACATTCAACCCTTTTGACCATGATCATTTCACAAGACTCGAATTGATTCATCTTTCTGTTGTGTGTTTTCATGGATGATAATGAGGTGTGACGGCAGGTCTTCTAGGGAATGTTTAACAATGGCAATGCATTTCTTCTTTGTATTTCAGATGGTCAATCATATTACCCGTAAGTTGGGTTAAGGCATTTTGGATTCCTCTAATATCTGGGGGGGCTCGGGCAATCGGTTTGAGAGAGAGACACTGGGTTGCATGTGAAGTAAGAAATGTTCCAATAAAAGTTTTGTTTCAAATTATCCCCCAGTAGTAGAAATCACATATTTACTTACCTATATCTCCCTTCTCTTAACTTGTAGGTGGGATTGCCATCATTTCCTTGGGATTTCCCTGATTGTACTGCGTACTCACGATTCATGACAAAAGAATCTACCGCAGTTGACAACAAAGCTGAGTGTTCTTCTTCCTTTTCAAGATCTTTTAGGGTTCCCATTCCACCTCCATGGCATAGTGTCCAGTTGACACTTAGCAAGGGATGTGATGGAGTGGAGATCAATGGAGCTTGTACCGAGAAAACTATGGCTCACGCCAATTCATCATCGATATTTGATGATGCAAATTGTGAAACTGCAGTGGTTGGTGTTCACGATCAGAAATTGTTCAATGGAATCGTGGCTCGAACATCCTCTTCATTGTTTGAATTTTTGAATGAAATAAACCTTGGGCATTTGCCTCTATTTCCTCGTGGACGAGATAAAAAGGCTAGAATTCTCGAGTATCTTAACAACAAAAGCACACTCGATCAGTGCAAAAGTAGTATTGACCGAATAAGTTATAGCAGCAAATCATGTTTCCTTAGAGTGATTCTCCGCGCTTATAAGAAAGGTGCGTTTGAAGAGGGAGCTGTTATTTGTGCTCCCAAGTCAGCTGATCTATCTTTGTGGACTTCAAGGTGATTTATCTTTTCATTACTTCGTTAAAATGTTGCAAAAGTTTGGCACTTAACATTCATTCTATATGTTCATGCAGATCAGCAGACGACGAAAAAGCACTCCGAATTCCCGAATCTGCTGTAAGGCACTACTTCAAACTCAGAGAACAGTCGCCCACAATGTGGGAACTACAATTACCAGAAAATGATGCTGCTGCTGGAGAATCTCACAGGTGGCCCATCGGCTTCATCACCACTGGATTCGTTCACGGAAGGTTCGGATACTTCGGTTATCTCAAAACATAG

mRNA sequence

ATTAAATTAAATTAAATAAATAAAAAGAAATAGAAGCCCTATGCAGTTTCATCTTCCTCCCACCGCCCCCGCCCGCCTACTGTCTTCCACTCTTAACGGTGCCGGTGCCGGCGCCGCCGCTTCCCTCTAGCAGTTCGCAGTGAGTTTTCCACTATCTCTTTACAGATTTGCCCCTGTACTATTTGATCAAACTTGTAAATATCAAGATCTTTTTGAAAGAGTTTGAGCCAAGGAGAAGAATTGGAGCACGTGAAACACTTCTTTCTGATATAATAGCGTTGAAAGTTGAAGAACTTTTGCTGAAATATCAGGATGGGGGAGAAAGTCGTCACTGCTAGTGGTAAGGACAGGTCAATTCCCAGAAATCTCAATCTGCATAAGTTTGTAGACCCTCGGGCGTCTGAGCTGGAAGCTCTTCAATCCATCGTTTTGAATCGGATGAATAGTAATACTTGTGATCAAAGGTCGAAGAGGAGAAGAACTTCTTCTTATTTAACTAATGCTTCTAGGAAAAGGAAAAATAAGAAAATGAAATTGGATACCACCCATCTGGATTTAGCGAAAAACGAGAAGAAGGCTTCTCGGAAAATACGTCGCAGGGCTGAGCTTAAAATGAATCATGGCATTGGATTTTCTACTTCTGGGGATGGTACCAAAAGGCTTAGAACACATGTTTGGCATGCTAAGCGTTTCACTATGACTAAGCTTTGGGGTTTTCATCTCCCTCTAGGGTTGCAGGGCAGAGGTAAGGGTTCTAGAGCTCTTCTGAAATGGTACAATGATGGAGTGCTTATACATGATGCTAGTTATTACGTTCCCGTCCAGTTGGAGGGTCCAGAGTTTGTAGACCCTCGGGCGTCTGAGCTTGAAGCTCTTCAATCCATCGTTTTGAATCGGATGAATAGTAATACTTGTGATCAAAGGTCGAAGAGGAGAAGAACTTCTTCTTATTTAACTAATGCTTCTAGGAAAAGGAAAAATAAGAAAATGAAATTGGATACCACCCATCTGGATTTAGCGAAAAACGAGAAGAAGGCTTCTCGGAAAATACGTCGCAGGGCTGAGCTTAAAATGAATCATGGCATTGGATTTTCTACTTCTGGGGATGGTACCAAAAGGCTTAGAACACATGTTTGGCATGCTAAGCGTTTCACTATGACTAAGCTTTGGGGTTTTCATCTCCCTCTAGGGTTGCAGGGCAGAGGTAAGGGTTCTAGAGCTCTTCTGAAATGGTACAATGATGGAGTGCTTATACATGATGCTAGTTATTACGTTCCCGTCCAGTTGGAGGGTCCAGAGGACTCTCTGATTTCGGCTCTAGGAATGGTGTTGGAACCATCCATAGTATCTCATTCTCAAGACATTTCTCATGCAATTATTTCTGGTGTTATTTATGGTAGAGCAATTCTTCATGATTCCAGGACCCCGGGTGCTAATGCAATTGCTCCTATTTTTGCTTTACAATTAGTTACTGAGGTCTTGTCTTTTCTTCAGATGGATGAGAAAAATATCCCAATTTACTGTTCTTCATTAGAAGGGCAACTTGCAAAATTGGAAGTATTTGGCTCAAATGCATCCCAGCTTCTTGAAAAGTTTTTGCAGCCTATGACACGTGCTTCACAGAATCTTTGGCAGTTGAAAAAGCATTCCACTGGGGGTCCTGATGGTAACTCTCATTTGAAGACATTGTTCAATCGCGAAAACGAGAATTACATTCCTTCATATGGAATTGCATCCATCGCTTTCAAAGATCCTCGAATGNATTCTCATTTGAAGACATTGTTCAATCGCGAAAACGAGAATTACATTCCATCATATGGAATTGCATCCATCGCTTTCAAAGATCCTCGAATGCTACCGAATGAAAAGACTACAGACGTTCAAGATTCAACTTCAATGCATAACCCTGCTGATTCCTCAGCAATTCTTTCTGAAGATAAAGAAATTTCAAAAAGTAATGAAATGTTATCATCATCTTTGGATTCAAGAATTGACGAAAATGGTTTTTTACTTGAGAACAAGGAATTGTGGGATGCCAAAACTGGAATGAGGGCCCCTGTGGAAGATACTGTTATTTGTGCAGCAAGACATCATACACGGATGAATCGCTTTTGCCTTGATGAACCGTCTGCAGAGATGGCGAAAGATCTGAGCTCATTGCAAAGCTCAAGTGCTTGTCCCACATTGCTTTTAAATGAGAATGACGAAAGCAGTACTCTTTTAAGATGGTCAATCATATTACCCGTAAGTTGGGTTAAGGCATTTTGGATTCCTCTAATATCTGGGGGGGCTCGGGCAATCGGTTTGAGAGAGAGACACTGGGTTGCATGTGAAGTGGGATTGCCATCATTTCCTTGGGATTTCCCTGATTGTACTGCGTACTCACGATTCATGACAAAAGAATCTACCGCAGTTGACAACAAAGCTGAGTGTTCTTCTTCCTTTTCAAGATCTTTTAGGGTTCCCATTCCACCTCCATGGCATAGTGTCCAGTTGACACTTAGCAAGGGATGTGATGGAGTGGAGATCAATGGAGCTTGTACCGAGAAAACTATGGCTCACGCCAATTCATCATCGATATTTGATGATGCAAATTGTGAAACTGCAGTGGTTGGTGTTCACGATCAGAAATTGTTCAATGGAATCGTGGCTCGAACATCCTCTTCATTGTTTGAATTTTTGAATGAAATAAACCTTGGGCATTTGCCTCTATTTCCTCGTGGACGAGATAAAAAGGCTAGAATTCTCGAGTATCTTAACAACAAAAGCACACTCGATCAGTGCAAAAGTAGTATTGACCGAATAAGTTATAGCAGCAAATCATGTTTCCTTAGAGTGATTCTCCGCGCTTATAAGAAAGGTGCGTTTGAAGAGGGAGCTGTTATTTGTGCTCCCAAGTCAGCTGATCTATCTTTGTGGACTTCAAGATCAGCAGACGACGAAAAAGCACTCCGAATTCCCGAATCTGCTGTAAGGCACTACTTCAAACTCAGAGAACAGTCGCCCACAATGTGGGAACTACAATTACCAGAAAATGATGCTGCTGCTGGAGAATCTCACAGGTGGCCCATCGGCTTCATCACCACTGGATTCGTTCACGGAAGGTTCGGATACTTCGGTTATCTCAAAACATAG

Coding sequence (CDS)

ATGGGGGAGAAAGTCGTCACTGCTAGTGGTAAGGACAGGTCAATTCCCAGAAATCTCAATCTGCATAAGTTTGTAGACCCTCGGGCGTCTGAGCTGGAAGCTCTTCAATCCATCGTTTTGAATCGGATGAATAGTAATACTTGTGATCAAAGGTCGAAGAGGAGAAGAACTTCTTCTTATTTAACTAATGCTTCTAGGAAAAGGAAAAATAAGAAAATGAAATTGGATACCACCCATCTGGATTTAGCGAAAAACGAGAAGAAGGCTTCTCGGAAAATACGTCGCAGGGCTGAGCTTAAAATGAATCATGGCATTGGATTTTCTACTTCTGGGGATGGTACCAAAAGGCTTAGAACACATGTTTGGCATGCTAAGCGTTTCACTATGACTAAGCTTTGGGGTTTTCATCTCCCTCTAGGGTTGCAGGGCAGAGGTAAGGGTTCTAGAGCTCTTCTGAAATGGTACAATGATGGAGTGCTTATACATGATGCTAGTTATTACGTTCCCGTCCAGTTGGAGGGTCCAGAGTTTGTAGACCCTCGGGCGTCTGAGCTTGAAGCTCTTCAATCCATCGTTTTGAATCGGATGAATAGTAATACTTGTGATCAAAGGTCGAAGAGGAGAAGAACTTCTTCTTATTTAACTAATGCTTCTAGGAAAAGGAAAAATAAGAAAATGAAATTGGATACCACCCATCTGGATTTAGCGAAAAACGAGAAGAAGGCTTCTCGGAAAATACGTCGCAGGGCTGAGCTTAAAATGAATCATGGCATTGGATTTTCTACTTCTGGGGATGGTACCAAAAGGCTTAGAACACATGTTTGGCATGCTAAGCGTTTCACTATGACTAAGCTTTGGGGTTTTCATCTCCCTCTAGGGTTGCAGGGCAGAGGTAAGGGTTCTAGAGCTCTTCTGAAATGGTACAATGATGGAGTGCTTATACATGATGCTAGTTATTACGTTCCCGTCCAGTTGGAGGGTCCAGAGGACTCTCTGATTTCGGCTCTAGGAATGGTGTTGGAACCATCCATAGTATCTCATTCTCAAGACATTTCTCATGCAATTATTTCTGGTGTTATTTATGGTAGAGCAATTCTTCATGATTCCAGGACCCCGGGTGCTAATGCAATTGCTCCTATTTTTGCTTTACAATTAGTTACTGAGGTCTTGTCTTTTCTTCAGATGGATGAGAAAAATATCCCAATTTACTGTTCTTCATTAGAAGGGCAACTTGCAAAATTGGAAGTATTTGGCTCAAATGCATCCCAGCTTCTTGAAAAGTTTTTGCAGCCTATGACACGTGCTTCACAGAATCTTTGGCAGTTGAAAAAGCATTCCACTGGGGGTCCTGATGGTAACTCTCATTTGAAGACATTGTTCAATCGCGAAAACGAGAATTACATTCCTTCATATGGAATTGCATCCATCGCTTTCAAAGATCCTCGAATGNATTCTCATTTGAAGACATTGTTCAATCGCGAAAACGAGAATTACATTCCATCATATGGAATTGCATCCATCGCTTTCAAAGATCCTCGAATGCTACCGAATGAAAAGACTACAGACGTTCAAGATTCAACTTCAATGCATAACCCTGCTGATTCCTCAGCAATTCTTTCTGAAGATAAAGAAATTTCAAAAAGTAATGAAATGTTATCATCATCTTTGGATTCAAGAATTGACGAAAATGGTTTTTTACTTGAGAACAAGGAATTGTGGGATGCCAAAACTGGAATGAGGGCCCCTGTGGAAGATACTGTTATTTGTGCAGCAAGACATCATACACGGATGAATCGCTTTTGCCTTGATGAACCGTCTGCAGAGATGGCGAAAGATCTGAGCTCATTGCAAAGCTCAAGTGCTTGTCCCACATTGCTTTTAAATGAGAATGACGAAAGCAGTACTCTTTTAAGATGGTCAATCATATTACCCGTAAGTTGGGTTAAGGCATTTTGGATTCCTCTAATATCTGGGGGGGCTCGGGCAATCGGTTTGAGAGAGAGACACTGGGTTGCATGTGAAGTGGGATTGCCATCATTTCCTTGGGATTTCCCTGATTGTACTGCGTACTCACGATTCATGACAAAAGAATCTACCGCAGTTGACAACAAAGCTGAGTGTTCTTCTTCCTTTTCAAGATCTTTTAGGGTTCCCATTCCACCTCCATGGCATAGTGTCCAGTTGACACTTAGCAAGGGATGTGATGGAGTGGAGATCAATGGAGCTTGTACCGAGAAAACTATGGCTCACGCCAATTCATCATCGATATTTGATGATGCAAATTGTGAAACTGCAGTGGTTGGTGTTCACGATCAGAAATTGTTCAATGGAATCGTGGCTCGAACATCCTCTTCATTGTTTGAATTTTTGAATGAAATAAACCTTGGGCATTTGCCTCTATTTCCTCGTGGACGAGATAAAAAGGCTAGAATTCTCGAGTATCTTAACAACAAAAGCACACTCGATCAGTGCAAAAGTAGTATTGACCGAATAAGTTATAGCAGCAAATCATGTTTCCTTAGAGTGATTCTCCGCGCTTATAAGAAAGGTGCGTTTGAAGAGGGAGCTGTTATTTGTGCTCCCAAGTCAGCTGATCTATCTTTGTGGACTTCAAGATCAGCAGACGACGAAAAAGCACTCCGAATTCCCGAATCTGCTGTAAGGCACTACTTCAAACTCAGAGAACAGTCGCCCACAATGTGGGAACTACAATTACCAGAAAATGATGCTGCTGCTGGAGAATCTCACAGGTGGCCCATCGGCTTCATCACCACTGGATTCGTTCACGGAAGGTTCGGATACTTCGGTTATCTCAAAACATAG

Protein sequence

MGEKVVTASGKDRSIPRNLNLHKFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMKLDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWGFHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMKLDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWGFHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSHSQDISHAIISGVIYGRAILHDSRTPGANAIAPIFALQLVTEVLSFLQMDEKNIPIYCSSLEGQLAKLEVFGSNASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFKDPRMXSHLKTLFNRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAILSEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNRFCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGGARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPIPPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIVARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCFLRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPTMWELQLPENDAAAGESHRWPIGFITTGFVHGRFGYFGYLKT

Homology

[Close]

BLAST of Cp4.1LG14g02420 vs. ExPASy Swiss-Prot
Match: F4IL30 (Ribonucleases P/MRP protein subunit POP1 OS=Arabidopsis thaliana OX=3702 GN=POP1 PE=1 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.6e-138
Identity = 311/817 (38.07%), Postives = 423/817 (51.77%), Query Frame = 0


Query: 165 SYYVPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNK 224
           S   P ++   +F + RA ELE+L SIV  R+N +   +R+KRRRT+SY    ++KR  K
Sbjct: 17  SSLAPRKINVQKFSEARAPELESLHSIVSERLNKDFRSKRNKRRRTNSYNNQPAKKRNIK 76

Query: 225 KMKLDTT--HLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTM 284
           + K  +    +    +E K +R+++RR ELK N   GF TSGDGTKRLRTHVWHAKRFTM
Sbjct: 77  RQKSQSLIGQVSGGDHEVKITRRVKRRMELKGNPETGFCTSGDGTKRLRTHVWHAKRFTM 136

Query: 285 TKLWGFHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEP 344
           TKLWGFHLPLGL GRG+GSR +LK    GVL+HDASY++ VQLEGPE SL+S L M+LEP
Sbjct: 137 TKLWGFHLPLGLHGRGRGSRDVLKQSRQGVLVHDASYHIAVQLEGPEGSLLSILNMLLEP 196

Query: 345 SIVSHSQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL------------------- 404
           S  SHS+++  +I++G  Y  A+L+    P + AIAP+  +                   
Sbjct: 197 SPSSHSKEVFDSILTGGSYENAMLYHVEPPVSQAIAPVTYMWRPSKIPKRRNEEKGGDGI 256

Query: 405 -----------------------------QLVTEVLSFLQMDEKNIPIYCSSLEGQLAKL 464
                                          + +V    QM+E  + + C SLEGQLAKL
Sbjct: 257 GTDLPVSDKDHEDFRKLWVWIHASSFSEGYAILKVACQKQMNETGVSVDCFSLEGQLAKL 316

Query: 465 EVFGSNASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIA 524
           E+FGS AS LL+K L P T  S+N                                    
Sbjct: 317 EIFGSKASHLLQKTLHPATSTSEN-----------------------------------P 376

Query: 525 SIAFKDPRMXSHLKTLFNRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPAD 584
           SI  K     + +K + +   E  + S  I +    DPR++           TS H+   
Sbjct: 377 SILRKCSMEKAEVKNVADLYTEENVSSGAILAQFVIDPRLI----------LTSPHDDRT 436

Query: 585 SSAILSEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHH 644
            S       E  K+    S    +  +   F      LWDA + +  P E+ ++C  +H 
Sbjct: 437 VSV------ETIKTEPTESVETTTNTEAETFPEVFNCLWDANSELTPPEEENMLCWEKHQ 496

Query: 645 TRMNRFCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIP 704
           +RM+  CLD+P+AE+ K  S  +SS +CP LLL      +    WS+ILP+SW+K FW  
Sbjct: 497 SRMDSLCLDDPAAEVPKVSSRPRSSRSCPLLLLKHKKLGNAPTGWSLILPLSWIKVFWNA 556

Query: 705 LISGGARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRS 764
            +S GA AIG RE+ WV+C+ GLP FP DFPDC AYS F   E+  ++ KA+      R 
Sbjct: 557 FVSKGAHAIGQREKRWVSCDDGLPFFPSDFPDCKAYSSFTLSEAADLEEKAQRRPPAIRP 616

Query: 765 FRVPIPPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKL 824
           FR+PIPPPW+S+ +T S G                   S+  F         +  +   L
Sbjct: 617 FRIPIPPPWNSIHVTRSIG-----------------EGSNQKFSSNGRSVVEISSYGGNL 676

Query: 825 FNGIVARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYS 884
           F+GIVARTS SL  FL      ++ LFP    K +  L     +   D  K        S
Sbjct: 677 FDGIVARTSDSLTTFLQTFTSDNMLLFPHNTSKPSTDLMMTLQE---DDKKVRAQIHQSS 736

Query: 885 SKSCFLRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKA-LRIPESAVRHYFKL 931
           +K C +RV+L A+K+G+FEEGAV+CAP  AD+SL  S  ++ E   + IP+S+V  YF  
Sbjct: 737 NKLCLVRVLLHAFKEGSFEEGAVVCAPTLADISLLKSSCSEGEDGRVTIPQSSVSSYF-- 759

[Close]

BLAST of Cp4.1LG14g02420 vs. ExPASy Swiss-Prot
Match: Q99575 (Ribonucleases P/MRP protein subunit POP1 OS=Homo sapiens OX=9606 GN=POP1 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-12
Identity = 141/610 (23.11%), Postives = 227/610 (37.21%), Query Frame = 0


Query: 165 SYYVPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNK 224
           S  +P  +    F   RA+E+ A+   V  + +++   Q   R      +++  ++   +
Sbjct: 95  SQEIPKYITASTFAQARAAEISAMLKAVTQKSSNSLVFQTLPRHMRRRAMSHNVKRLPRR 154

Query: 225 KMKLDTTHLDLAKNEKK--ASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTM 284
             ++     + A ++KK  +  K  +     MN  + F+        L TH+WHAKRF M
Sbjct: 155 LQEIAQKEAEKAVHQKKEHSKNKCHKARRCHMNRTLEFNRRQKKNIWLETHIWHAKRFHM 214

Query: 285 TKLWGFHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEP 344
            K WG+   LG +   K  RA  +   +  L+ D SYY  ++L+G E+ ++ AL  +   
Sbjct: 215 VKKWGY--CLGERPTVKSHRACYRAMTNRCLLQDLSYYCCLELKGKEEEILKALSGMC-- 274

Query: 345 SIVSHSQDISHAIISGVIYGRAILH------------------DSRTPGANAIAPIFALQ 404
           +I +     +   +SG   G  +L+                    RTPG     P  + Q
Sbjct: 275 NIDTGLTFAAVHCLSGKRQGSLVLYRVNKYPREMLGPVTFIWKSQRTPG----DPSESRQ 334

Query: 405 LVTEVLSFLQMD-EKNIPIYCSSLEGQLAKLEVFGSNASQLLEKFLQPMTRASQNLWQLK 464
           L   +   L+ D  + I   C  +E   + + +              P+   SQ     +
Sbjct: 335 LWIWLHPTLKQDILEEIKAACQCVEPIKSAVCI------------ADPLPTPSQ-----E 394

Query: 465 KHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFKDPRM------------XSHLKTLF 524
           K  T  PD     K     + EN  P   I     +DP +             S L    
Sbjct: 395 KSQTELPDEKIGKKRKRKDDGENAKPIKKIIGDGTRDPCLPYSWISPTTGIIISDLTMEM 454

Query: 525 NRENENYIPSYGIASIAFK---------DPRMLPNE---KTTDVQDSTSMHNPADSSAIL 584
           NR       S+ I + A K         D    P+    +T    DS S+H      AI 
Sbjct: 455 NRFRLIGPLSHSILTEAIKAASVHTVGEDTEETPHRWWIETCKKPDSVSLH--CRQEAIF 514

Query: 585 SEDKEISKSNEMLSSSL------DSRID---ENGFLLENKELWDAKTGMR------APVE 644
                I+   E+ + ++      D RI+   +    L N E       +R       PVE
Sbjct: 515 ELLGGITSPAEIPAGTILGLTVGDPRINLPQKKSKALPNPEKCQDNEKVRQLLLEGVPVE 574

Query: 645 DT-------VICAARHHTRMNRFCLDEPSAEMAKDLSSL---QSSSACPTLLLNE----- 699
            T        IC +    +++   L+   +E+    S L      S  P LL+ +     
Sbjct: 575 CTHSFIWNQDICKSVTENKISDQDLNRMRSELLVPGSQLILGPHESKIPILLIQQPGKVT 634

[Close]

BLAST of Cp4.1LG14g02420 vs. ExPASy Swiss-Prot
Match: Q11188 (Uncharacterized protein C05D11.9 OS=Caenorhabditis elegans OX=6239 GN=C05D11.9 PE=4 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 3.9e-06
Identity = 49/163 (30.06%), Postives = 70/163 (42.94%), Query Frame = 0


Query: 19  LNLHKFVDPRASELEALQSIVLN--------RMNSNTCDQRSKRRRTSSYLTNASRKRKN 78
           + + KFV+ R + +  L   + N             T  QR  R      +    R+   
Sbjct: 3   IEVEKFVEARTNSIAQLLKAIDNDALVSGEVTKGPRTAAQRLPRHMRRRAMAYDIRRFPR 62

Query: 79  KKMKLDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMT 138
              +    HL ++K+ KK   +  RR         G STS  G   L THVWHAKRF M 
Sbjct: 63  TMREFAAAHL-ISKHAKKCPSRFARRKSANSRTKFGRSTSTKGI-WLSTHVWHAKRFRMI 122

Query: 139 KLWGFHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLE 174
           + WGF   L  +   +G RA+L+  N   +I D SYY  V ++
Sbjct: 123 QKWGF--KLADRSFQRGFRAVLRDSNKNCVIRDRSYYTCVTIQ 161

[Close]

BLAST of Cp4.1LG14g02420 vs. NCBI nr
Match: XP_023552875.1 (uncharacterized protein LOC111810401 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1387 bits (3590), Expect = 0.0
Identity = 716/814 (87.96%), Postives = 722/814 (88.70%), Query Frame = 0


Query: 168 VPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 227
           +P  L   +FVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK
Sbjct: 15  IPRNLNVHKFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 74

Query: 228 LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 287
           LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG
Sbjct: 75  LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 134

Query: 288 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 347
           FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH
Sbjct: 135 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 194

Query: 348 SQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL------------------------ 407
           SQDISHAIISGVIYGRAILHDSRTPGANAIAP+  +                        
Sbjct: 195 SQDISHAIISGVIYGRAILHDSRTPGANAIAPVTYMWRPCPCRKKEINVNNHNSSVFKTI 254

Query: 408 ----------QLVT-----------EVLSFL---QMDEKNIPIYCSSLEGQLAKLEVFGS 467
                     QL             + L F    +MDEKNIPIYCSSLEGQLAKLEVFGS
Sbjct: 255 DGVDSSSTSRQLWVWLHPSASSEGCDALKFACQKEMDEKNIPIYCSSLEGQLAKLEVFGS 314

Query: 468 NASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFK 527
           NASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLF                   
Sbjct: 315 NASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLF------------------- 374

Query: 528 DPRMXSHLKTLFNRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 587
                       NRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL
Sbjct: 375 ------------NRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 434

Query: 588 SEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNR 647
           SEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNR
Sbjct: 435 SEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNR 494

Query: 648 FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGG 707
           FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGG
Sbjct: 495 FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGG 554

Query: 708 ARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 767
           ARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI
Sbjct: 555 ARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 614

Query: 768 PPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIV 827
           PPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIV
Sbjct: 615 PPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIV 674

Query: 828 ARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 887
           ARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF
Sbjct: 675 ARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 734

Query: 888 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT 933
           LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT
Sbjct: 735 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT 794

[Close]

BLAST of Cp4.1LG14g02420 vs. NCBI nr
Match: XP_022931485.1 (uncharacterized protein LOC111437649 [Cucurbita moschata] >XP_022931486.1 uncharacterized protein LOC111437649 [Cucurbita moschata])

HSP 1 Score: 1333 bits (3449), Expect = 0.0
Identity = 691/811 (85.20%), Postives = 703/811 (86.68%), Query Frame = 0


Query: 168 VPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 227
           +P  L   +FVDPRASELEALQSI+LNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK
Sbjct: 15  IPRNLNVHKFVDPRASELEALQSIILNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 74

Query: 228 LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 287
           +DTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG
Sbjct: 75  MDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 134

Query: 288 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 347
           FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH
Sbjct: 135 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 194

Query: 348 SQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL------------------------ 407
           SQDISHAIISGVIYGRAILHD R PGA AIAP+  +                        
Sbjct: 195 SQDISHAIISGVIYGRAILHDIRVPGATAIAPVTYMWRPCPYRKKEINVNNHNCSVFKTM 254

Query: 408 ----------QLVT-----------EVLSFL---QMDEKNIPIYCSSLEGQLAKLEVFGS 467
                     QL             + L F    +MDEKNIPIYCSSLEGQLAKLEVFGS
Sbjct: 255 DGIDASSTSRQLWVWLHPSASCEGYDALKFACQKEMDEKNIPIYCSSLEGQLAKLEVFGS 314

Query: 468 NASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFK 527
           NASQLLE  L PMTRASQNLWQLKKHSTGGPDGNSHLKTLF                   
Sbjct: 315 NASQLLENLLHPMTRASQNLWQLKKHSTGGPDGNSHLKTLF------------------- 374

Query: 528 DPRMXSHLKTLFNRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 587
                       N ENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL
Sbjct: 375 ------------NCENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 434

Query: 588 SEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNR 647
           SEDKEI KSNEMLSS LDSRIDENGFLLENKELWDAK+GMRAPVEDTVICAARHHTRMNR
Sbjct: 435 SEDKEIPKSNEMLSS-LDSRIDENGFLLENKELWDAKSGMRAPVEDTVICAARHHTRMNR 494

Query: 648 FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGG 707
           FCLDEPSAEMAKDLSSLQ SSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLIS G
Sbjct: 495 FCLDEPSAEMAKDLSSLQCSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISKG 554

Query: 708 ARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 767
           ARAIGLRERHW+ACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI
Sbjct: 555 ARAIGLRERHWIACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 614

Query: 768 PPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIV 827
           PPPWHSVQLTLSK CDGVE NGACTEK MAH +SSSIFDDANCETAVVGVHDQKLFNGIV
Sbjct: 615 PPPWHSVQLTLSKECDGVESNGACTEKNMAHTDSSSIFDDANCETAVVGVHDQKLFNGIV 674

Query: 828 ARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 887
           ARTSSSLFEFLNEINLGHLPLFP GRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF
Sbjct: 675 ARTSSSLFEFLNEINLGHLPLFPHGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 734

Query: 888 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT 930
           LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT
Sbjct: 735 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT 792

[Close]

BLAST of Cp4.1LG14g02420 vs. NCBI nr
Match: KAG7015159.1 (Ribonucleases P/MRP protein subunit POP1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1331 bits (3444), Expect = 0.0
Identity = 688/811 (84.83%), Postives = 704/811 (86.81%), Query Frame = 0


Query: 168 VPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 227
           +P  L   +FVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK
Sbjct: 15  IPRNLNVHKFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 74

Query: 228 LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 287
           LDTTHLDLAKN+KKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG
Sbjct: 75  LDTTHLDLAKNDKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 134

Query: 288 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 347
           FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH
Sbjct: 135 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 194

Query: 348 SQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL------------------------ 407
           SQDISHAIISGVIYGRAILHD R PGANAIAP+  +                        
Sbjct: 195 SQDISHAIISGVIYGRAILHDIRVPGANAIAPVTYMWRPCPCRKKEINLNNHNSSVFKTI 254

Query: 408 ----------QLVT-----------EVLSFL---QMDEKNIPIYCSSLEGQLAKLEVFGS 467
                     QL             + L F    +MDEKNIPIYCSSLEGQLAKLEVFGS
Sbjct: 255 DGIDASSTSRQLWVWLHPSASSEGYDALKFACQKEMDEKNIPIYCSSLEGQLAKLEVFGS 314

Query: 468 NASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFK 527
           NASQLLE  L PMTRASQNLWQLKKHS GGPDGNSHLKTLF                   
Sbjct: 315 NASQLLENLLHPMTRASQNLWQLKKHSAGGPDGNSHLKTLF------------------- 374

Query: 528 DPRMXSHLKTLFNRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 587
                       NRENE+YIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL
Sbjct: 375 ------------NRENESYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 434

Query: 588 SEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNR 647
           SEDKEISKSNEMLSSSLDSRIDEN FLLENKELWDAK+GMRAPVEDTVICAARHHTRMNR
Sbjct: 435 SEDKEISKSNEMLSSSLDSRIDENSFLLENKELWDAKSGMRAPVEDTVICAARHHTRMNR 494

Query: 648 FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGG 707
           FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTL+RWSIILPVSWVKAFWIPLI+ G
Sbjct: 495 FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLVRWSIILPVSWVKAFWIPLITRG 554

Query: 708 ARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 767
           ARAIGLRERHW+ACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI
Sbjct: 555 ARAIGLRERHWIACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 614

Query: 768 PPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIV 827
           PPPWHSVQLTL KG DGVE NGACTEK MAHA SSSI DDANCETAV+GVHDQKLFNGIV
Sbjct: 615 PPPWHSVQLTLRKGRDGVESNGACTEKNMAHAKSSSIVDDANCETAVIGVHDQKLFNGIV 674

Query: 828 ARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 887
           ARTSSSLFEFLNEINLGHLPLFP GRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF
Sbjct: 675 ARTSSSLFEFLNEINLGHLPLFPHGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 734

Query: 888 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT 930
           LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKAL+IPESAVRHYFKLREQSP+
Sbjct: 735 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALQIPESAVRHYFKLREQSPS 793

[Close]

BLAST of Cp4.1LG14g02420 vs. NCBI nr
Match: KAG6577162.1 (Ribonucleases P/MRP protein subunit POP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1328 bits (3437), Expect = 0.0
Identity = 686/811 (84.59%), Postives = 703/811 (86.68%), Query Frame = 0


Query: 168 VPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 227
           +P  L   +FVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK
Sbjct: 55  IPRNLNVHKFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 114

Query: 228 LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 287
           LDTTHLDLAKN+KKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG
Sbjct: 115 LDTTHLDLAKNDKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 174

Query: 288 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 347
           FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH
Sbjct: 175 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 234

Query: 348 SQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL------------------------ 407
           SQDISHAIISGVIYGRAILHD R PGANAIAP+  +                        
Sbjct: 235 SQDISHAIISGVIYGRAILHDIRVPGANAIAPVTYMWRPCPCRKKEINLNNHNSSVFKTI 294

Query: 408 ----------QLVT-----------EVLSFL---QMDEKNIPIYCSSLEGQLAKLEVFGS 467
                     QL             + L F    +MDEKNIPIYCSSLEGQLAKLEVFGS
Sbjct: 295 DAIDASSTSRQLWVWLHPSASSEGYDALKFACQKEMDEKNIPIYCSSLEGQLAKLEVFGS 354

Query: 468 NASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFK 527
           NASQLLE  L PMTRASQNLWQLKKHSTGGPDGNSHLKTLF                   
Sbjct: 355 NASQLLENLLHPMTRASQNLWQLKKHSTGGPDGNSHLKTLF------------------- 414

Query: 528 DPRMXSHLKTLFNRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 587
                       NRENE+YIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL
Sbjct: 415 ------------NRENESYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 474

Query: 588 SEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNR 647
           SEDKEISKSNEMLSSSLDSRIDEN FLLENKELWDAK+GMRAPVEDTVICAARHHTRMNR
Sbjct: 475 SEDKEISKSNEMLSSSLDSRIDENSFLLENKELWDAKSGMRAPVEDTVICAARHHTRMNR 534

Query: 648 FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGG 707
           FCLDEPS EMAKDLSSLQSSSACPTLLLNENDESSTL+RWSIILP+SWVKAFWIPLI+ G
Sbjct: 535 FCLDEPSTEMAKDLSSLQSSSACPTLLLNENDESSTLVRWSIILPLSWVKAFWIPLITRG 594

Query: 708 ARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 767
           ARAIGLRERHW+ACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI
Sbjct: 595 ARAIGLRERHWIACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 654

Query: 768 PPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIV 827
           PPPWHSVQLTL KG DGVE NGACTEK MAHA S SI DDANCETAV+GVHDQKLFNGIV
Sbjct: 655 PPPWHSVQLTLRKGRDGVESNGACTEKNMAHAKSPSIVDDANCETAVIGVHDQKLFNGIV 714

Query: 828 ARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 887
           ARTSSSLFEFLNEINLGHLPLFP GRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF
Sbjct: 715 ARTSSSLFEFLNEINLGHLPLFPHGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 774

Query: 888 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT 930
           LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKAL+IPESAVRHYFKLREQSP+
Sbjct: 775 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALQIPESAVRHYFKLREQSPS 833

[Close]

BLAST of Cp4.1LG14g02420 vs. NCBI nr
Match: XP_022985358.1 (ribonucleases P/MRP protein subunit POP1 [Cucurbita maxima])

HSP 1 Score: 1312 bits (3395), Expect = 0.0
Identity = 683/811 (84.22%), Postives = 700/811 (86.31%), Query Frame = 0


Query: 168 VPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 227
           +P  L   +FVD RASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK
Sbjct: 15  IPRNLNVHKFVDSRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 74

Query: 228 LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 287
           LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG
Sbjct: 75  LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 134

Query: 288 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 347
           FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLIS LGMVLEPSIVSH
Sbjct: 135 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISILGMVLEPSIVSH 194

Query: 348 SQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL------------------------ 407
           SQDISHAIISGVIYGRAILHD R  GANAIAP+  +                        
Sbjct: 195 SQDISHAIISGVIYGRAILHDIRVLGANAIAPVTYMWRPCPCRKKEINVNNHNSTVFKTI 254

Query: 408 ----------QLVT-----------EVLSFL---QMDEKNIPIYCSSLEGQLAKLEVFGS 467
                     QL             + L F    +MDEKNIPIYCSSLEGQLAKLEVFGS
Sbjct: 255 DGIDASSTSRQLWVWLHPSASSEGYDSLKFACQKEMDEKNIPIYCSSLEGQLAKLEVFGS 314

Query: 468 NASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFK 527
           NASQLLEKFL PMTRASQNLWQLKKHSTGGPD NSHLKTLF                   
Sbjct: 315 NASQLLEKFLHPMTRASQNLWQLKKHSTGGPDDNSHLKTLF------------------- 374

Query: 528 DPRMXSHLKTLFNRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 587
                       NRENENYIPSYGIASI+ KDPRMLPNEKTTDVQDSTSMHNPADSSAIL
Sbjct: 375 ------------NRENENYIPSYGIASISLKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 434

Query: 588 SEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNR 647
           SED+EISKSNEMLSSSLDSRIDENGFLLENKELWDAK+GMRAPVEDTVICAARHHTRMNR
Sbjct: 435 SEDREISKSNEMLSSSLDSRIDENGFLLENKELWDAKSGMRAPVEDTVICAARHHTRMNR 494

Query: 648 FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGG 707
           FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTL+RWSIILPVSWVKAFWIPLIS G
Sbjct: 495 FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLVRWSIILPVSWVKAFWIPLISRG 554

Query: 708 ARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 767
           ARAIGLRERHW+ACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI
Sbjct: 555 ARAIGLRERHWIACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 614

Query: 768 PPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIV 827
           PPPWHSVQLTLSKG DGVE NGACTEK MA  +SSSIFDDANCETAVVGVHDQKLFNGIV
Sbjct: 615 PPPWHSVQLTLSKGLDGVESNGACTEKNMALTDSSSIFDDANCETAVVGVHDQKLFNGIV 674

Query: 828 ARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 887
           ARTSSSLFEF +EINLGHLPLFP GRDKKARIL+YLNNKSTLDQ KSS DRISYSSKSCF
Sbjct: 675 ARTSSSLFEFFSEINLGHLPLFPCGRDKKARILKYLNNKSTLDQSKSSTDRISYSSKSCF 734

Query: 888 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT 930
           LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKAL+IPESAV HYFKLREQSP+
Sbjct: 735 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALQIPESAVSHYFKLREQSPS 793

[Close]

BLAST of Cp4.1LG14g02420 vs. ExPASy TrEMBL
Match: A0A6J1EZJ5 (uncharacterized protein LOC111437649 OS=Cucurbita moschata OX=3662 GN=LOC111437649 PE=4 SV=1)

HSP 1 Score: 1333 bits (3449), Expect = 0.0
Identity = 691/811 (85.20%), Postives = 703/811 (86.68%), Query Frame = 0


Query: 168 VPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 227
           +P  L   +FVDPRASELEALQSI+LNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK
Sbjct: 15  IPRNLNVHKFVDPRASELEALQSIILNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 74

Query: 228 LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 287
           +DTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG
Sbjct: 75  MDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 134

Query: 288 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 347
           FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH
Sbjct: 135 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 194

Query: 348 SQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL------------------------ 407
           SQDISHAIISGVIYGRAILHD R PGA AIAP+  +                        
Sbjct: 195 SQDISHAIISGVIYGRAILHDIRVPGATAIAPVTYMWRPCPYRKKEINVNNHNCSVFKTM 254

Query: 408 ----------QLVT-----------EVLSFL---QMDEKNIPIYCSSLEGQLAKLEVFGS 467
                     QL             + L F    +MDEKNIPIYCSSLEGQLAKLEVFGS
Sbjct: 255 DGIDASSTSRQLWVWLHPSASCEGYDALKFACQKEMDEKNIPIYCSSLEGQLAKLEVFGS 314

Query: 468 NASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFK 527
           NASQLLE  L PMTRASQNLWQLKKHSTGGPDGNSHLKTLF                   
Sbjct: 315 NASQLLENLLHPMTRASQNLWQLKKHSTGGPDGNSHLKTLF------------------- 374

Query: 528 DPRMXSHLKTLFNRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 587
                       N ENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL
Sbjct: 375 ------------NCENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 434

Query: 588 SEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNR 647
           SEDKEI KSNEMLSS LDSRIDENGFLLENKELWDAK+GMRAPVEDTVICAARHHTRMNR
Sbjct: 435 SEDKEIPKSNEMLSS-LDSRIDENGFLLENKELWDAKSGMRAPVEDTVICAARHHTRMNR 494

Query: 648 FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGG 707
           FCLDEPSAEMAKDLSSLQ SSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLIS G
Sbjct: 495 FCLDEPSAEMAKDLSSLQCSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISKG 554

Query: 708 ARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 767
           ARAIGLRERHW+ACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI
Sbjct: 555 ARAIGLRERHWIACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 614

Query: 768 PPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIV 827
           PPPWHSVQLTLSK CDGVE NGACTEK MAH +SSSIFDDANCETAVVGVHDQKLFNGIV
Sbjct: 615 PPPWHSVQLTLSKECDGVESNGACTEKNMAHTDSSSIFDDANCETAVVGVHDQKLFNGIV 674

Query: 828 ARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 887
           ARTSSSLFEFLNEINLGHLPLFP GRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF
Sbjct: 675 ARTSSSLFEFLNEINLGHLPLFPHGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 734

Query: 888 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT 930
           LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT
Sbjct: 735 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT 792

[Close]

BLAST of Cp4.1LG14g02420 vs. ExPASy TrEMBL
Match: A0A6J1JDD9 (ribonucleases P/MRP protein subunit POP1 OS=Cucurbita maxima OX=3661 GN=LOC111483394 PE=4 SV=1)

HSP 1 Score: 1312 bits (3395), Expect = 0.0
Identity = 683/811 (84.22%), Postives = 700/811 (86.31%), Query Frame = 0


Query: 168 VPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 227
           +P  L   +FVD RASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK
Sbjct: 15  IPRNLNVHKFVDSRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 74

Query: 228 LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 287
           LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG
Sbjct: 75  LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 134

Query: 288 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 347
           FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLIS LGMVLEPSIVSH
Sbjct: 135 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISILGMVLEPSIVSH 194

Query: 348 SQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL------------------------ 407
           SQDISHAIISGVIYGRAILHD R  GANAIAP+  +                        
Sbjct: 195 SQDISHAIISGVIYGRAILHDIRVLGANAIAPVTYMWRPCPCRKKEINVNNHNSTVFKTI 254

Query: 408 ----------QLVT-----------EVLSFL---QMDEKNIPIYCSSLEGQLAKLEVFGS 467
                     QL             + L F    +MDEKNIPIYCSSLEGQLAKLEVFGS
Sbjct: 255 DGIDASSTSRQLWVWLHPSASSEGYDSLKFACQKEMDEKNIPIYCSSLEGQLAKLEVFGS 314

Query: 468 NASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFK 527
           NASQLLEKFL PMTRASQNLWQLKKHSTGGPD NSHLKTLF                   
Sbjct: 315 NASQLLEKFLHPMTRASQNLWQLKKHSTGGPDDNSHLKTLF------------------- 374

Query: 528 DPRMXSHLKTLFNRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 587
                       NRENENYIPSYGIASI+ KDPRMLPNEKTTDVQDSTSMHNPADSSAIL
Sbjct: 375 ------------NRENENYIPSYGIASISLKDPRMLPNEKTTDVQDSTSMHNPADSSAIL 434

Query: 588 SEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNR 647
           SED+EISKSNEMLSSSLDSRIDENGFLLENKELWDAK+GMRAPVEDTVICAARHHTRMNR
Sbjct: 435 SEDREISKSNEMLSSSLDSRIDENGFLLENKELWDAKSGMRAPVEDTVICAARHHTRMNR 494

Query: 648 FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGG 707
           FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTL+RWSIILPVSWVKAFWIPLIS G
Sbjct: 495 FCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLVRWSIILPVSWVKAFWIPLISRG 554

Query: 708 ARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 767
           ARAIGLRERHW+ACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI
Sbjct: 555 ARAIGLRERHWIACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPI 614

Query: 768 PPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIV 827
           PPPWHSVQLTLSKG DGVE NGACTEK MA  +SSSIFDDANCETAVVGVHDQKLFNGIV
Sbjct: 615 PPPWHSVQLTLSKGLDGVESNGACTEKNMALTDSSSIFDDANCETAVVGVHDQKLFNGIV 674

Query: 828 ARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCF 887
           ARTSSSLFEF +EINLGHLPLFP GRDKKARIL+YLNNKSTLDQ KSS DRISYSSKSCF
Sbjct: 675 ARTSSSLFEFFSEINLGHLPLFPCGRDKKARILKYLNNKSTLDQSKSSTDRISYSSKSCF 734

Query: 888 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPT 930
           LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKAL+IPESAV HYFKLREQSP+
Sbjct: 735 LRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKALQIPESAVSHYFKLREQSPS 793

[Close]

BLAST of Cp4.1LG14g02420 vs. ExPASy TrEMBL
Match: A0A0A0KZR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G050800 PE=4 SV=1)

HSP 1 Score: 1111 bits (2873), Expect = 0.0
Identity = 579/799 (72.47%), Postives = 646/799 (80.85%), Query Frame = 0


Query: 168 VPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 227
           +P  L   +FVDPRA+ELEALQSIVLNRM+S+ CDQRSKRRRTSSYL NASRKRKNKKMK
Sbjct: 15  IPRNLNVHKFVDPRATELEALQSIVLNRMSSDICDQRSKRRRTSSYLNNASRKRKNKKMK 74

Query: 228 LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 287
           LD T+L+L K++KKASRK RRR ELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMT+LWG
Sbjct: 75  LDNTNLNLEKDDKKASRKQRRRVELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTRLWG 134

Query: 288 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 347
           FHLPLGLQGRGKGSRALLK YNDGVLIHDASYYVP+Q+EGPE+SLIS L  VL PSI+S+
Sbjct: 135 FHLPLGLQGRGKGSRALLKRYNDGVLIHDASYYVPIQMEGPEESLISVLRRVLVPSILSY 194

Query: 348 SQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL---------------------QLV 407
           SQDISHAIISG IYGRAILHD R  G NAIAP+  +                     QL 
Sbjct: 195 SQDISHAIISGEIYGRAILHDVRATGTNAIAPVTYMWRPRNTVFKAIDGTNMSSTKRQLW 254

Query: 408 T-----------EVLSFL---QMDEKNIPIYCSSLEGQLAKLEVFGSNASQLLEKFLQPM 467
                       + L F    +MDE+N PI CSSLEGQLAKLEVFGSNASQLLE  L P+
Sbjct: 255 VWLHASTASEGYDALKFACQKEMDERNTPIDCSSLEGQLAKLEVFGSNASQLLENILHPI 314

Query: 468 TRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFKDPRMXSHLKTLFN 527
           +RAS+NLWQLKKH  GG +GNSHLK +F+                              N
Sbjct: 315 SRASKNLWQLKKHPIGGLEGNSHLK-IFS------------------------------N 374

Query: 528 RENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAILSEDKEISKSNEML 587
            ENENY+PS+GIAS+ FKDPRMLPNEK  DVQ STSM NPADS +  S D EIS+SNE+L
Sbjct: 375 HENENYLPSHGIASVTFKDPRMLPNEKIADVQASTSMQNPADSLSTDSRDLEISRSNEIL 434

Query: 588 SSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNRFCLDEPSAEMAKD 647
           SSSL S I E+GFL ENKELWDA +GMRAPVEDTVICAARHH RM+RFCLDEP AEMAKD
Sbjct: 435 SSSLYSTISESGFLHENKELWDANSGMRAPVEDTVICAARHHMRMDRFCLDEPPAEMAKD 494

Query: 648 LSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGGARAIGLRERHWVA 707
           L+SLQ S++CPTLLLNENDESSTL+RWSIILP+SWVKAFWIP    GARAIGLRERHW+A
Sbjct: 495 LNSLQCSNSCPTLLLNENDESSTLIRWSIILPISWVKAFWIPFTCRGARAIGLRERHWIA 554

Query: 708 CEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECS-SSFSRSFRVPIPPPWHSVQLTLS 767
           CEVGLPSFPWDFPDC AYS+FM+KE+TAVDNK ECS SS SRS +VPIPPPW SVQ+TL 
Sbjct: 555 CEVGLPSFPWDFPDCAAYSQFMSKEATAVDNKVECSTSSCSRSLKVPIPPPWDSVQMTLC 614

Query: 768 KGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIVARTSSSLFEFLN 827
           K  DGVE NGA TEK M HA++SSI  DANCETAVVGVHD K F+GIVARTSSSLFEFL+
Sbjct: 615 KEPDGVEKNGAFTEKNMTHADTSSIVYDANCETAVVGVHDHKFFDGIVARTSSSLFEFLS 674

Query: 828 EINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCFLRVILRAYKKGA 887
           +I L HLPLFP+GR+KKARILE+LN KST+DQCKSSI++  Y+ KSCFLRVILRAYKKGA
Sbjct: 675 DIKLEHLPLFPQGREKKARILEFLN-KSTVDQCKSSINQFCYTGKSCFLRVILRAYKKGA 734

Query: 888 FEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPTMWELQLPENDAA 930
           FEEGAVICAPKSADLSLWTSRS D+E+AL+IPESAV+HYFKL++QSP+MWELQLPE+D A
Sbjct: 735 FEEGAVICAPKSADLSLWTSRSVDEERALQIPESAVKHYFKLKQQSPSMWELQLPEDDVA 780

[Close]

BLAST of Cp4.1LG14g02420 vs. ExPASy TrEMBL
Match: A0A5A7TTM4 (Multiple RNA-binding domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001630 PE=4 SV=1)

HSP 1 Score: 1103 bits (2852), Expect = 0.0
Identity = 580/800 (72.50%), Postives = 644/800 (80.50%), Query Frame = 0


Query: 168 VPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 227
           +P  L   +FVDPRA+ELEALQSIVLNRM+S+ CDQRSKRRRTSSYL NASRKRKNKK K
Sbjct: 15  IPRNLNVHKFVDPRATELEALQSIVLNRMSSDICDQRSKRRRTSSYLNNASRKRKNKKGK 74

Query: 228 LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 287
           LD+T+L+L K++KKASR+ RRR ELKMN GIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG
Sbjct: 75  LDSTNLNLEKDDKKASRRKRRRVELKMNRGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 134

Query: 288 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 347
           FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVP+QLEGPE+SLISAL MVL PSI+S+
Sbjct: 135 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPIQLEGPEESLISALRMVLVPSILSY 194

Query: 348 SQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL---------------------QLV 407
           SQDISHAIISG IYGRAILHD R    NAIAP+  +                     QL 
Sbjct: 195 SQDISHAIISGDIYGRAILHDVRATATNAIAPVTYMWRPHNTVFKAIDGANMSSTKRQLW 254

Query: 408 T-----------EVLSFL---QMDEKNIPIYCSSLEGQLAKLEVFGSNASQLLEKFLQPM 467
                       + L F    +MDE+N PI CSSLEGQLAKLEVFGSNASQLLE  L P+
Sbjct: 255 VWLHASTASEGYDALKFACQKEMDERNTPIDCSSLEGQLAKLEVFGSNASQLLENILHPI 314

Query: 468 TRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFKDPRMXSHLKTLFN 527
           +RAS+NLWQLKKH  GG +GNSHLK +F+                              N
Sbjct: 315 SRASRNLWQLKKHPIGGLEGNSHLK-IFS------------------------------N 374

Query: 528 RENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAILSEDKEISKSNEML 587
            ENENYIPS+GIAS+ FKDPRMLPNEK  DVQDSTSM NPADS A  S D EIS+SNE+L
Sbjct: 375 HENENYIPSHGIASVTFKDPRMLPNEKIADVQDSTSMQNPADSLATDSRDLEISRSNEIL 434

Query: 588 SSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNRFCLDEPSAEMAKD 647
           SSS  + I ENG L ENKELWDA +GMRAPVED VICA RH TRMN FCLDEP AEMAKD
Sbjct: 435 SSSSFATIYENGLLHENKELWDATSGMRAPVEDIVICATRHRTRMNHFCLDEPPAEMAKD 494

Query: 648 LSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGGARAIGLRERHWVA 707
           L+SLQ SS+CPTLLLNENDESSTL+RWSIILP+SWVKAFWIP I  GARAIGLRERHW+A
Sbjct: 495 LNSLQCSSSCPTLLLNENDESSTLVRWSIILPISWVKAFWIPFICRGARAIGLRERHWIA 554

Query: 708 CEVGLPSFPWDFPDCTAYSRF-MTKESTAVDNKAECS-SSFSRSFRVPIPPPWHSVQLTL 767
           CEVGLPSFPWDFPDC AYS+F M KE+TAVDNK ECS SS SRS +VP+PPPW+SVQ+TL
Sbjct: 555 CEVGLPSFPWDFPDCAAYSQFFMPKEATAVDNKVECSTSSCSRSLKVPVPPPWNSVQMTL 614

Query: 768 SKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIVARTSSSLFEFL 827
            KG D VE NGACTEK M  A++SSI  DANCETAVVGVHDQ  F+GIVARTSSSLFE+L
Sbjct: 615 CKGPDEVEKNGACTEKIMIPADTSSIVYDANCETAVVGVHDQIFFDGIVARTSSSLFEYL 674

Query: 828 NEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCFLRVILRAYKKG 887
           +EI L HLPLFP+GR+KKARILE+LN KSTLDQCKS+I++  Y+ KSCFLRVILRAYKKG
Sbjct: 675 SEIKLEHLPLFPQGREKKARILEFLN-KSTLDQCKSNINQFFYTGKSCFLRVILRAYKKG 734

Query: 888 AFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPTMWELQLPENDA 930
           AFEEGAVICAPKSADLSLWTSRS D+E+AL+IPESAV+HYFKL++QSP+MWELQLPE+D 
Sbjct: 735 AFEEGAVICAPKSADLSLWTSRSVDEERALQIPESAVKHYFKLKKQSPSMWELQLPEDDV 781

[Close]

BLAST of Cp4.1LG14g02420 vs. ExPASy TrEMBL
Match: A0A1S3BSQ3 (uncharacterized protein LOC103493121 OS=Cucumis melo OX=3656 GN=LOC103493121 PE=4 SV=1)

HSP 1 Score: 1095 bits (2831), Expect = 0.0
Identity = 577/800 (72.12%), Postives = 641/800 (80.12%), Query Frame = 0


Query: 168 VPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNKKMK 227
           +P  L   +FVDPRA+ELEALQSIVLNRM+S+ CDQRSKRRRTSSYL NASRKRKNKK K
Sbjct: 15  IPRNLNVHKFVDPRATELEALQSIVLNRMSSDICDQRSKRRRTSSYLNNASRKRKNKKGK 74

Query: 228 LDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 287
           LD+T+L+L K++KKASR+ RRR ELKMN GIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG
Sbjct: 75  LDSTNLNLEKDDKKASRRKRRRVELKMNRGIGFSTSGDGTKRLRTHVWHAKRFTMTKLWG 134

Query: 288 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEPSIVSH 347
           FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVP+QLEGPE+SLISAL  VL PSI+S+
Sbjct: 135 FHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPIQLEGPEESLISALRTVLVPSILSY 194

Query: 348 SQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL---------------------QLV 407
           SQDISHAIISG IYGRAILHD R    NAIAP+  +                     QL 
Sbjct: 195 SQDISHAIISGDIYGRAILHDVRATATNAIAPVTYMWRPRNTVFKAIDGANMSSTKRQLW 254

Query: 408 T-----------EVLSFL---QMDEKNIPIYCSSLEGQLAKLEVFGSNASQLLEKFLQPM 467
                       + L F    +MDE+N PI CSSLEGQLAKLEVFGSNASQLLE  L P+
Sbjct: 255 VWLHASTASEGYDALKFACQKEMDERNTPIDCSSLEGQLAKLEVFGSNASQLLENLLHPI 314

Query: 468 TRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIASIAFKDPRMXSHLKTLFN 527
           +RAS+NLWQLKKH  GG +GNSHLK +F+                              N
Sbjct: 315 SRASRNLWQLKKHPIGGLEGNSHLK-IFS------------------------------N 374

Query: 528 RENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAILSEDKEISKSNEML 587
            ENENYIPS+GIAS+ FKDPRMLPNEK  DVQDSTSM NPADS A  S D EIS+SNE+L
Sbjct: 375 HENENYIPSHGIASVTFKDPRMLPNEKIADVQDSTSMQNPADSLATDSRDLEISRSNEIL 434

Query: 588 SSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHHTRMNRFCLDEPSAEMAKD 647
           SSS  + I ENG L ENKELWDA +GMRAPVED VICA RH TRMN FCLDEP AEMAKD
Sbjct: 435 SSSSFATIYENGLLHENKELWDATSGMRAPVEDIVICATRHRTRMNHFCLDEPPAEMAKD 494

Query: 648 LSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISGGARAIGLRERHWVA 707
           L+ LQ SS+CPTLLLNENDESSTL+RWSIILP+SWVKAFWIP I  GARAIGLRERHW+A
Sbjct: 495 LNPLQCSSSCPTLLLNENDESSTLVRWSIILPISWVKAFWIPFICRGARAIGLRERHWIA 554

Query: 708 CEVGLPSFPWDFPDCTAYSRF-MTKESTAVDNKAECS-SSFSRSFRVPIPPPWHSVQLTL 767
           CEVGLPSFPWDFPD  AYS+F M KE+TAVDNK ECS SS SRS +VP+PPPW+SVQ+TL
Sbjct: 555 CEVGLPSFPWDFPDFAAYSQFFMPKEATAVDNKVECSTSSCSRSLKVPVPPPWNSVQMTL 614

Query: 768 SKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKLFNGIVARTSSSLFEFL 827
            KG D VE NGACTEK M  A++SSI  DANCETAVVGVHDQ  F+GIVARTSSSLFE+L
Sbjct: 615 CKGPDEVEKNGACTEKIMIPADTSSIVYDANCETAVVGVHDQIFFDGIVARTSSSLFEYL 674

Query: 828 NEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCFLRVILRAYKKG 887
           +EI L HLPLFP+GR+KKARILE+LN KSTLDQCKS+I++  Y+ KSCFLRVILRAYKKG
Sbjct: 675 SEIKLEHLPLFPQGREKKARILEFLN-KSTLDQCKSNINQFCYTGKSCFLRVILRAYKKG 734

Query: 888 AFEEGAVICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPTMWELQLPENDA 930
           AFEEGAVICAPKSADLSLWTSRS D+E+AL+IPESAV+HYFKL++QSP+MWELQLPE+D 
Sbjct: 735 AFEEGAVICAPKSADLSLWTSRSVDEERALQIPESAVKHYFKLKKQSPSMWELQLPEDDV 781

[Close]

BLAST of Cp4.1LG14g02420 vs. TAIR 10
Match: AT2G47300.2 (ribonuclease Ps )

HSP 1 Score: 493.4 bits (1269), Expect = 4.0e-139
Identity = 311/817 (38.07%), Postives = 423/817 (51.77%), Query Frame = 0


Query: 165 SYYVPVQLEGPEFVDPRASELEALQSIVLNRMNSNTCDQRSKRRRTSSYLTNASRKRKNK 224
           S   P ++   +F + RA ELE+L SIV  R+N +   +R+KRRRT+SY    ++KR  K
Sbjct: 17  SSLAPRKINVQKFSEARAPELESLHSIVSERLNKDFRSKRNKRRRTNSYNNQPAKKRNIK 76

Query: 225 KMKLDTT--HLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTHVWHAKRFTM 284
           + K  +    +    +E K +R+++RR ELK N   GF TSGDGTKRLRTHVWHAKRFTM
Sbjct: 77  RQKSQSLIGQVSGGDHEVKITRRVKRRMELKGNPETGFCTSGDGTKRLRTHVWHAKRFTM 136

Query: 285 TKLWGFHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLISALGMVLEP 344
           TKLWGFHLPLGL GRG+GSR +LK    GVL+HDASY++ VQLEGPE SL+S L M+LEP
Sbjct: 137 TKLWGFHLPLGLHGRGRGSRDVLKQSRQGVLVHDASYHIAVQLEGPEGSLLSILNMLLEP 196

Query: 345 SIVSHSQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL------------------- 404
           S  SHS+++  +I++G  Y  A+L+    P + AIAP+  +                   
Sbjct: 197 SPSSHSKEVFDSILTGGSYENAMLYHVEPPVSQAIAPVTYMWRPSKIPKRRNEEKGGDGI 256

Query: 405 -----------------------------QLVTEVLSFLQMDEKNIPIYCSSLEGQLAKL 464
                                          + +V    QM+E  + + C SLEGQLAKL
Sbjct: 257 GTDLPVSDKDHEDFRKLWVWIHASSFSEGYAILKVACQKQMNETGVSVDCFSLEGQLAKL 316

Query: 465 EVFGSNASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLFNRENENYIPSYGIA 524
           E+FGS AS LL+K L P T  S+N                                    
Sbjct: 317 EIFGSKASHLLQKTLHPATSTSEN-----------------------------------P 376

Query: 525 SIAFKDPRMXSHLKTLFNRENENYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPAD 584
           SI  K     + +K + +   E  + S  I +    DPR++           TS H+   
Sbjct: 377 SILRKCSMEKAEVKNVADLYTEENVSSGAILAQFVIDPRLI----------LTSPHDDRT 436

Query: 585 SSAILSEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMRAPVEDTVICAARHH 644
            S       E  K+    S    +  +   F      LWDA + +  P E+ ++C  +H 
Sbjct: 437 VSV------ETIKTEPTESVETTTNTEAETFPEVFNCLWDANSELTPPEEENMLCWEKHQ 496

Query: 645 TRMNRFCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIP 704
           +RM+  CLD+P+AE+ K  S  +SS +CP LLL      +    WS+ILP+SW+K FW  
Sbjct: 497 SRMDSLCLDDPAAEVPKVSSRPRSSRSCPLLLLKHKKLGNAPTGWSLILPLSWIKVFWNA 556

Query: 705 LISGGARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRS 764
            +S GA AIG RE+ WV+C+ GLP FP DFPDC AYS F   E+  ++ KA+      R 
Sbjct: 557 FVSKGAHAIGQREKRWVSCDDGLPFFPSDFPDCKAYSSFTLSEAADLEEKAQRRPPAIRP 616

Query: 765 FRVPIPPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDANCETAVVGVHDQKL 824
           FR+PIPPPW+S+ +T S G                   S+  F         +  +   L
Sbjct: 617 FRIPIPPPWNSIHVTRSIG-----------------EGSNQKFSSNGRSVVEISSYGGNL 676

Query: 825 FNGIVARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKSTLDQCKSSIDRISYS 884
           F+GIVARTS SL  FL      ++ LFP    K +  L     +   D  K        S
Sbjct: 677 FDGIVARTSDSLTTFLQTFTSDNMLLFPHNTSKPSTDLMMTLQE---DDKKVRAQIHQSS 736

Query: 885 SKSCFLRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKA-LRIPESAVRHYFKL 931
           +K C +RV+L A+K+G+FEEGAV+CAP  AD+SL  S  ++ E   + IP+S+V  YF  
Sbjct: 737 NKLCLVRVLLHAFKEGSFEEGAVVCAPTLADISLLKSSCSEGEDGRVTIPQSSVSSYF-- 759

[Close]

BLAST of Cp4.1LG14g02420 vs. TAIR 10
Match: AT2G47300.3 (ribonuclease Ps )

HSP 1 Score: 323.9 bits (829), Expect = 4.2e-88
Identity = 218/651 (33.49%), Postives = 306/651 (47.00%), Query Frame = 0


Query: 329 EDSLISALGMVLEPSIVSHSQDISHAIISGVIYGRAILHDSRTPGANAIAPIFAL----- 388
           + SL+S L M+LEPS  SHS+++  +I++G  Y  A+L+    P + AIAP+  +     
Sbjct: 16  QGSLLSILNMLLEPSPSSHSKEVFDSILTGGSYENAMLYHVEPPVSQAIAPVTYMWRPSK 75

Query: 389 -------------------------------------------QLVTEVLSFLQMDEKNI 448
                                                        + +V    QM+E  +
Sbjct: 76  IPKRRNEEKGGDGIGTDLPVSDKDHEDFRKLWVWIHASSFSEGYAILKVACQKQMNETGV 135

Query: 449 PIYCSSLEGQLAKLEVFGSNASQLLEKFLQPMTRASQNLWQLKKHSTGGPDGNSHLKTLF 508
            + C SLEGQLAKLE+FGS AS LL+K L P T  S+N                      
Sbjct: 136 SVDCFSLEGQLAKLEIFGSKASHLLQKTLHPATSTSEN---------------------- 195

Query: 509 NRENENYIPSYGIASIAFKDPRMXSHLKTLFNRENENYIPSYGIASIAFKDPRMLPNEKT 568
                         SI  K     + +K + +   E  + S  I +    DPR++     
Sbjct: 196 -------------PSILRKCSMEKAEVKNVADLYTEENVSSGAILAQFVIDPRLI----- 255

Query: 569 TDVQDSTSMHNPADSSAILSEDKEISKSNEMLSSSLDSRIDENGFLLENKELWDAKTGMR 628
                 TS H+    S       E  K+    S    +  +   F      LWDA + + 
Sbjct: 256 -----LTSPHDDRTVSV------ETIKTEPTESVETTTNTEAETFPEVFNCLWDANSELT 315

Query: 629 APVEDTVICAARHHTRMNRFCLDEPSAEMAKDLSSLQSSSACPTLLLNENDESSTLLRWS 688
            P E+ ++C  +H +RM+  CLD+P+AE+ K  S  +SS +CP LLL      +    WS
Sbjct: 316 PPEEENMLCWEKHQSRMDSLCLDDPAAEVPKVSSRPRSSRSCPLLLLKHKKLGNAPTGWS 375

Query: 689 IILPVSWVKAFWIPLISGGARAIGLRERHWVACEVGLPSFPWDFPDCTAYSRFMTKESTA 748
           +ILP+SW+K FW   +S GA AIG RE+ WV+C+ GLP FP DFPDC AYS F   E+  
Sbjct: 376 LILPLSWIKVFWNAFVSKGAHAIGQREKRWVSCDDGLPFFPSDFPDCKAYSSFTLSEAAD 435

Query: 749 VDNKAECSSSFSRSFRVPIPPPWHSVQLTLSKGCDGVEINGACTEKTMAHANSSSIFDDA 808
           ++ KA+      R FR+PIPPPW+S+ +T S G                   S+  F   
Sbjct: 436 LEEKAQRRPPAIRPFRIPIPPPWNSIHVTRSIG-----------------EGSNQKFSSN 495

Query: 809 NCETAVVGVHDQKLFNGIVARTSSSLFEFLNEINLGHLPLFPRGRDKKARILEYLNNKST 868
                 +  +   LF+GIVARTS SL  FL      ++ LFP    K +  L     +  
Sbjct: 496 GRSVVEISSYGGNLFDGIVARTSDSLTTFLQTFTSDNMLLFPHNTSKPSTDLMMTLQE-- 555

Query: 869 LDQCKSSIDRISYSSKSCFLRVILRAYKKGAFEEGAVICAPKSADLSLWTSRSADDEKA- 928
            D  K        S+K C +RV+L A+K+G+FEEGAV+CAP  AD+SL  S  ++ E   
Sbjct: 556 -DDKKVRAQIHQSSNKLCLVRVLLHAFKEGSFEEGAVVCAPTLADISLLKSSCSEGEDGR 592

Query: 929 LRIPESAVRHYFKLREQSPTMWELQLPENDAAAGESHRWPIGFITTGFVHG 931
           + IP+S+V  YF  +EQ    WEL +PE D    +SHRWPIGF+TTGFV G
Sbjct: 616 VTIPQSSVSSYF--QEQPCGTWELNVPE-DTLTEQSHRWPIGFVTTGFVRG 592

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g02420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IL30	5.6e-138	38.07	Ribonucleases P/MRP protein subunit POP1 OS=Arabidopsis thaliana OX=3702 GN=POP1...	[more]
Q99575	2.1e-12	23.11	Ribonucleases P/MRP protein subunit POP1 OS=Homo sapiens OX=9606 GN=POP1 PE=1 SV...	[more]
Q11188	3.9e-06	30.06	Uncharacterized protein C05D11.9 OS=Caenorhabditis elegans OX=6239 GN=C05D11.9 P...	[more]

BLAST of Cp4.1LG14g02420 vs. NCBI nr


Match Name	Identity	Description
XP_023552875.1	87.96	uncharacterized protein LOC111810401 [Cucurbita pepo subsp. pepo]	[more]
XP_022931485.1	85.20	uncharacterized protein LOC111437649 [Cucurbita moschata] >XP_022931486.1 unchar...	[more]
KAG7015159.1	84.83	Ribonucleases P/MRP protein subunit POP1 [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6577162.1	84.59	Ribonucleases P/MRP protein subunit POP1, partial [Cucurbita argyrosperma subsp....	[more]
XP_022985358.1	84.22	ribonucleases P/MRP protein subunit POP1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG14g02420 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1EZJ5	85.20	uncharacterized protein LOC111437649 OS=Cucurbita moschata OX=3662 GN=LOC1114376...	[more]
A0A6J1JDD9	84.22	ribonucleases P/MRP protein subunit POP1 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A0A0KZR7	72.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G050800 PE=4 SV=1	[more]
A0A5A7TTM4	72.50	Multiple RNA-binding domain-containing protein 1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BSQ3	72.13	uncharacterized protein LOC103493121 OS=Cucumis melo OX=3656 GN=LOC103493121 PE=...	[more]

BLAST of Cp4.1LG14g02420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47300.2	4.0e-139	38.07	ribonuclease Ps	[more]
AT2G47300.3	4.2e-88	33.49	ribonuclease Ps	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 233..253
None	No IPR available	COILS	Coil	Coil	coord: 80..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 519..539
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 519..534
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..69
IPR009723	Pop1, N-terminal	PFAM	PF06978	POP1	coord: 42..174 e-value: 1.4E-12 score: 48.0 coord: 202..327 e-value: 2.6E-11 score: 43.9
IPR012590	POPLD domain	PFAM	PF08170	POPLD	coord: 637..701 e-value: 7.9E-14 score: 51.8
IPR039182	Ribonucleases P/MRP protein subunit Pop1	PANTHER	PTHR22731	RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1	coord: 177..929 coord: 16..176
IPR018000	Neurotransmitter-gated ion-channel, conserved site	PROSITE	PS00236	NEUROTR_ION_CHANNEL	coord: 672..686

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g02420.1	Cp4.1LG14g02420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0001682	tRNA 5'-leader removal
cellular_component	GO:0016020	membrane
cellular_component	GO:0005655	nucleolar ribonuclease P complex
cellular_component	GO:0000172	ribonuclease MRP complex
molecular_function	GO:0003723	RNA binding