Cp4.1LG14g02270 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g02270
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	40S ribosomal protein S10-1-like
Location	Cp4.1LG14: 3142327 .. 3144867 (+)
RNA-Seq Expression	Cp4.1LG14g02270
Synteny	Cp4.1LG14g02270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGGGCCAGAGGCCCAAGCCAACGCAGCCCAGCGGCCCACTTAACACTCACAAACCCTAGAAGCTTTTCACGGCTGCTCCTGCTCCATCTCTTTTCACGGCTGCTCCTGTTCCTGCTCCTGCTCCTCATTCTTCTCGCCTCTTGCCTCGACTGCTGCTGTCTTCAGTTCTTCCTGAACTTCAACCATGGTACCTCTCTTCTTCTTCTAATTTTTTCTCTATCACTGCGTCTAATTTATGTTTGTTTCAGTTCTCTGGGTTTTAGAGTAATGGGGTATTTCAAAAGGAATCGATCTGGGAGTTGGAATTGTTACCCAATTGTGTAGTTTGAATTGTTGTAGTGGTTTAATTTTGAATTCGGCTGAGAAGGCTATATTTTAGTTTAGGGTTTAGTGTTTGGCCTCTCATTTTTCAGTTGATTCTGTTCTTCAGATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTATCTCTTTCAAGGTATAACCAAACTCGATCACTCTTAAGCTAGCGTTTTTATTTTCAGTTTTCTGATTCGAGGATGATTGTGTGATTTTATTTATTTGTATTGTTATGATTTCAGAGGGGGTTTGTTTTGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATTTGCAGGTTATTAAGCTGATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCATGGATGCATTACTACTGGTACCTCACCAACGATGGCATTGAGTTCCTCAGAACTTACCTCAATCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGGCCCTTTGGTGGACCACCCGGTGATCGCCCACGGTATAAATTATATCTACAATGCTGATTAATTCATTGCGGTTTATTGCTGATAGATCTGTGTTCTTGATCTACGGATTGTAGATAGTCGCAGATTTATAGGTGGATGTGTATTTGCATAGCTGTTTGTGTAATTTGCATGTGTTTTGTTATTTTGCAAGCTGTATTTATTCTTATCAGCATTCTGATTGAATTTTGGTGATTCTTATGAATCAGGGGTCCACCTCGTTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGTGATGGTTACCGTGGAGGTCCTCGTGGACCTGCTGGCGAGTTTGGGGGTGACAAGGGAGGAGCTCCTGCAGATTACAGGCCTTCTTTTGGGGTAATTATTTTATATAATCGTGCTATCCGTAATATGGTTGATGATTCCACATAAAAAATGCTGTTTTTTTACTGCTTTTGTTCTACCCTTGGGGTGGTTATTGTAGAGCGTTATTAAAAGCCATACAATCTTTGTTCATCTATATAGTTAGAGTTTTACTTAGGGTAACACCATTCTGCATGGTAAAATGGTAGTTAGAGTTTTACTTAGGGTAACAGCATTGTGCATGGTAAAATGGTTTTGATATTCTCGAGTAGGCTGGATTACATCTTATTGTTATAGATTAGTCTCTTCATCTGTTGATGCTTTCCTCCGTAAGTGCTTCCTAATCAGTTTGTCTGAGCAGTTAATAACTTGGATTAAAATGTTTAATAGTAGTGATCTTTGGCTTTTTCATGTCTTTGTCTCTGTTCACTAGCAATATAATGATTTTCTAGGGATAAACCTGTGATATCCCATATCGGTTGGAAAGGAGAACGAAACATTCCTTATAAGTGTGTGGAAACCTCTTCCTAATAGATGCGTTTTAAAACCCTGAGGGAATGGGAAAGTCCAAAGAGGACAGTATGACTGTTACAAAGTTGACTATTTTCCATTGAGGTTTTAGGTGAACATAAGAGTCTAGTGGCGAGAATCGCCTCTTATCCACGGATGAATACTTGTAATAGAAAAATGGGTAGCTGAAATGTTTGAAATGTCATAAAAACTTGATTTTTTGGGTCCGGTATTCCGATCACGGTATTATATGGTCACGGAAGTTATTTTGAATGAATTTTAACTTTATGATGGACCTCGATGTGATCTTTAATGTAAGTTCGATTAAAAGAAGTTTGACACGGTTATGTTCATTGTTGTTCTACCCTAAAAAATTTCTCAGGGTCCTGGTGGAAGGCCGGGATTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGCAGCAAGCTCAAACCTTCCATGAAAAGCATGATCTTAGAAGCAGTTTAATGAATTTTCAGTGGAAAGAGTTAGCAGCAGCTTGACTGAAGAGTTCATTAGCATTTTTTCCCCCTTTCATTTAGCTTTGGGAATCTTATTAATGTCAAATTTTCATTGTGCAAATTGAAGTTGACTTTAAAACACACCACTACTTTGCAAGTATAAATTTTGTTCTTCCCCTTTGACCGTCTTTTATTACTGTTTTAAGCAGATTCTTGTAGTTTTAATTAAACTGCATTTTTTATACATTTTATTTTTATTAAGATTGCTGATTATTTAATAGCTCATATAATTCTACAACCTTCTACTTTAATATATAATAGGCTTCCTACGATGTACTTATTTTGTATGTT

mRNA sequence

CATGGGCCAGAGGCCCAAGCCAACGCAGCCCAGCGGCCCACTTAACACTCACAAACCCTAGAAGCTTTTCACGGCTGCTCCTGCTCCATCTCTTTTCACGGCTGCTCCTGTTCCTGCTCCTGCTCCTCATTCTTCTCGCCTCTTGCCTCGACTGCTGCTGTCTTCAGTTCTTCCTGAACTTCAACCATGATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTATCTCTTTCAAGAGGGGGTTTGTTTTGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATTTGCAGGTTATTAAGCTGATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCATGGATGCATTACTACTGGTACCTCACCAACGATGGCATTGAGTTCCTCAGAACTTACCTCAATCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGGCCCTTTGGTGGACCACCCGGTGATCGCCCACGGGGTCCACCTCGTTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGTGATGGTTACCGTGGAGGTCCTCGTGGACCTGCTGGCGAGTTTGGGGGTGACAAGGGAGGAGCTCCTGCAGATTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGGCCGGGATTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGCAGCAAGCTCAAACCTTCCATGAAAAGCATGATCTTAGAAGCAGTTTAATGAATTTTCAGTGGAAAGAGTTAGCAGCAGCTTGACTGAAGAGTTCATTAGCATTTTTTCCCCCTTTCATTTAGCTTTGGGAATCTTATTAATGTCAAATTTTCATTGTGCAAATTGAAGTTGACTTTAAAACACACCACTACTTTGCAAGTATAAATTTTGTTCTTCCCCTTTGACCGTCTTTTATTACTGTTTTAAGCAGATTCTTGTAGTTTTAATTAAACTGCATTTTTTATACATTTTATTTTTATTAAGATTGCTGATTATTTAATAGCTCATATAATTCTACAACCTTCTACTTTAATATATAATAGGCTTCCTACGATGTACTTATTTTGTATGTT

Coding sequence (CDS)

ATGATTATTTCAGAGAAGAACCGTAGGGAGATCTCCAAGTATCTCTTTCAAGAGGGGGTTTGTTTTGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATTTGCAGGTTATTAAGCTGATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCATGGATGCATTACTACTGGTACCTCACCAACGATGGCATTGAGTTCCTCAGAACTTACCTCAATCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGGCCCTTTGGTGGACCACCCGGTGATCGCCCACGGGGTCCACCTCGTTTTGAGGGTGGTGAGAGGAGGTTTGGTGACCGTGATGGTTACCGTGGAGGTCCTCGTGGACCTGCTGGCGAGTTTGGGGGTGACAAGGGAGGAGCTCCTGCAGATTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGGCCGGGATTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGCAGCAAGCTCAAACCTTCCATGA

Protein sequence

MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

Homology

[Close]

BLAST of Cp4.1LG14g02270 vs. ExPASy Swiss-Prot
Match: Q9SW09 (40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.9e-75
Identity = 144/182 (79.12%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVCFAKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G  
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
            RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S 
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSG 177

Query: 181 LP 183
            P
Sbjct: 181 FP 177

[Close]

BLAST of Cp4.1LG14g02270 vs. ExPASy Swiss-Prot
Match: P0DKK8 (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-74
Identity = 144/181 (79.56%), Postives = 157/181 (86.74%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV +AKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGG 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG 
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAAS 180
             RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGR G G +G G  +S
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGGGFGAGPTSS 180

[Close]

BLAST of Cp4.1LG14g02270 vs. ExPASy Swiss-Prot
Match: P0DKK9 (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-74
Identity = 144/181 (79.56%), Postives = 157/181 (86.74%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV +AKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGG 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG 
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAAS 180
             RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGR G G +G G  +S
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGGGFGAGPTSS 180

[Close]

BLAST of Cp4.1LG14g02270 vs. ExPASy Swiss-Prot
Match: Q9LTF2 (40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2)

HSP 1 Score: 276.9 bits (707), Expect = 1.6e-73
Identity = 147/183 (80.33%), Postives = 158/183 (86.34%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVCFAKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RG PR EGG+
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGD 120

Query: 121 R-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASS 180
           R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A + S
Sbjct: 121 RPRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSGS 179

Query: 181 NLP 183
            LP
Sbjct: 181 GLP 179

[Close]

BLAST of Cp4.1LG14g02270 vs. ExPASy Swiss-Prot
Match: Q9FFS8 (40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.5e-68
Identity = 146/181 (80.66%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NRREISKYLF+EGV FAKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGG 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + G
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-G 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAA 179
           ERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA 
Sbjct: 121 ERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGAAG 177

[Close]

BLAST of Cp4.1LG14g02270 vs. NCBI nr
Match: XP_023553253.1 (40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023553254.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >KAG6577181.1 40S ribosomal protein S10-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015178.1 40S ribosomal protein S10-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 363 bits (931), Expect = 2.02e-126
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Cp4.1LG14g02270 vs. NCBI nr
Match: XP_022985005.1 (40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosomal protein S10-1-like [Cucurbita maxima])

HSP 1 Score: 362 bits (928), Expect = 5.80e-126
Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Cp4.1LG14g02270 vs. NCBI nr
Match: XP_022931372.1 (40S ribosomal protein S10-1-like [Cucurbita moschata] >XP_022931373.1 40S ribosomal protein S10-1-like [Cucurbita moschata])

HSP 1 Score: 361 bits (927), Expect = 8.24e-126
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGG AASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGGAASSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Cp4.1LG14g02270 vs. NCBI nr
Match: XP_022982956.1 (40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_023521589.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023528948.1 40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360 bits (924), Expect = 2.36e-125
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA ASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Cp4.1LG14g02270 vs. NCBI nr
Match: XP_004146529.1 (40S ribosomal protein S10-1 [Cucumis sativus] >KGN53350.1 hypothetical protein Csa_014962 [Cucumis sativus])

HSP 1 Score: 358 bits (919), Expect = 1.37e-124
Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
           RRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSN
Sbjct: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Cp4.1LG14g02270 vs. ExPASy TrEMBL
Match: A0A6J1JA51 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=4 SV=1)

HSP 1 Score: 362 bits (928), Expect = 2.81e-126
Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Cp4.1LG14g02270 vs. ExPASy TrEMBL
Match: A0A6J1EYG0 (40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437576 PE=4 SV=1)

HSP 1 Score: 361 bits (927), Expect = 3.99e-126
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGG AASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGGAASSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Cp4.1LG14g02270 vs. ExPASy TrEMBL
Match: A0A6J1J0T0 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481645 PE=4 SV=1)

HSP 1 Score: 360 bits (924), Expect = 1.14e-125
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
           RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGA ASSN
Sbjct: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAGASSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Cp4.1LG14g02270 vs. ExPASy TrEMBL
Match: A0A0A0KUQ3 (S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090 PE=4 SV=1)

HSP 1 Score: 358 bits (919), Expect = 6.62e-125
Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
           RRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSN
Sbjct: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Cp4.1LG14g02270 vs. ExPASy TrEMBL
Match: A0A1S3BST3 (40S ribosomal protein S10-1-like OS=Cucumis melo OX=3656 GN=LOC103493145 PE=4 SV=1)

HSP 1 Score: 357 bits (915), Expect = 2.70e-124
Identity = 178/182 (97.80%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRREISKYLFQEGVC+AKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
           RRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSN
Sbjct: 121 RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSN 180

Query: 181 LP 182
           LP
Sbjct: 181 LP 182

[Close]

BLAST of Cp4.1LG14g02270 vs. TAIR 10
Match: AT4G25740.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 282.7 bits (722), Expect = 2.1e-76
Identity = 144/182 (79.12%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVCFAKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G  
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
            RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S 
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSG 177

Query: 181 LP 183
            P
Sbjct: 181 FP 177

[Close]

BLAST of Cp4.1LG14g02270 vs. TAIR 10
Match: AT5G52650.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 276.9 bits (707), Expect = 1.1e-74
Identity = 147/183 (80.33%), Postives = 158/183 (86.34%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVCFAKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RG PR EGG+
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGD 120

Query: 121 R-RFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASS 180
           R RFGDRDGYR GPR   GEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A + S
Sbjct: 121 RPRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSGS 179

Query: 181 NLP 183
            LP
Sbjct: 181 GLP 179

[Close]

BLAST of Cp4.1LG14g02270 vs. TAIR 10
Match: AT5G41520.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-69
Identity = 146/181 (80.66%), Postives = 158/181 (87.29%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NRREISKYLF+EGV FAKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGG 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + G
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-G 120

Query: 121 ERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAA 179
           ERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA 
Sbjct: 121 ERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGAAG 177

[Close]

BLAST of Cp4.1LG14g02270 vs. TAIR 10
Match: AT4G25740.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 228.0 bits (580), Expect = 6.0e-60
Identity = 121/182 (66.48%), Postives = 131/182 (71.98%), Query Frame = 0


Query: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRREI KYLF+EGVCFAKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGE 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGP G             
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPRG------------- 120

Query: 121 RRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSN 180
                               G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S 
Sbjct: 121 --------------------GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSG 149

Query: 181 LP 183
            P
Sbjct: 181 FP 149

[Close]

BLAST of Cp4.1LG14g02270 vs. TAIR 10
Match: AT5G41520.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-49
Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 46  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGP 105
           MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG 
Sbjct: 1   MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG- 60

Query: 106 PGDRPRGPPRFEGGERRFGDRDGYRGGPRGPAGEFGGDKGGAPADYRPSF-GGPGG-RPG 165
            GDRPRGPPR + GERRFGDRDGYRGGP+   GE+ GDK GAPADY+P F GG GG R G
Sbjct: 61  GGDRPRGPPRGD-GERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQG 120

Query: 166 FGRGAGSYGGGAAAS 179
           FGRGAG +GGGAA S
Sbjct: 121 FGRGAGGFGGGAAGS 131

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g02270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SW09	2.9e-75	79.12	40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1	[more]
P0DKK8	1.4e-74	79.56	40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 ...	[more]
P0DKK9	1.4e-74	79.56	40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 ...	[more]
Q9LTF2	1.6e-73	80.33	40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2	[more]
Q9FFS8	1.5e-68	80.66	40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1	[more]

BLAST of Cp4.1LG14g02270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553253.1	2.02e-126	100.00	40S ribosomal protein S10-1-like [Cucurbita pepo subsp. pepo] >XP_023553254.1 40...	[more]
XP_022985005.1	5.80e-126	99.45	40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosoma...	[more]
XP_022931372.1	8.24e-126	99.45	40S ribosomal protein S10-1-like [Cucurbita moschata] >XP_022931373.1 40S riboso...	[more]
XP_022982956.1	2.36e-125	98.90	40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_023521589.1 40S ribosoma...	[more]
XP_004146529.1	1.37e-124	98.35	40S ribosomal protein S10-1 [Cucumis sativus] >KGN53350.1 hypothetical protein C...	[more]

BLAST of Cp4.1LG14g02270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JA51	2.81e-126	99.45	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=...	[more]
A0A6J1EYG0	3.99e-126	99.45	40S ribosomal protein S10-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437576 P...	[more]
A0A6J1J0T0	1.14e-125	98.90	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481645 PE=...	[more]
A0A0A0KUQ3	6.62e-125	98.35	S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090...	[more]
A0A1S3BST3	2.70e-124	97.80	40S ribosomal protein S10-1-like OS=Cucumis melo OX=3656 GN=LOC103493145 PE=4 SV...	[more]

BLAST of Cp4.1LG14g02270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25740.1	2.1e-76	79.12	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G52650.1	1.1e-74	80.33	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.1	1.1e-69	80.66	RNA binding Plectin/S10 domain-containing protein	[more]
AT4G25740.2	6.0e-60	66.48	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.2	3.7e-49	80.74	RNA binding Plectin/S10 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..104 e-value: 2.2E-47 score: 161.2
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 3..94 e-value: 8.2E-43 score: 144.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..129
None	No IPR available	PANTHER	PTHR12146:SF20	40S RIBOSOMAL PROTEIN S10-1-LIKE	coord: 1..182
IPR037447	40S Ribosomal protein S10	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g02270.1	Cp4.1LG14g02270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome