Cp4.1LG14g02170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g02170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Short-chain dehydrogenase TIC 32
Location	Cp4.1LG14: 3196950 .. 3207623 (+)
RNA-Seq Expression	Cp4.1LG14g02170
Synteny	Cp4.1LG14g02170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGATTGCTAATGATGAACCACCCAAAGAAAATAGCCATCTACCACAAGAAGATGGCAAAATTGTAATTTCATAGTCTAAAAAAACCTTGATTTCTTTTCAAAAGAGGGTTTATTCTAAAAGAAAACAAAACTTTTAGAGTGCAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATCTGTATTTGTATCGATCTCAACTATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGGTTTCGTTTCATCCCCTTCCCCTTTTTCTCCTTCTTCCCCTCTCTTTTAATCCCTTCTTTGATCTGGGTTTTGTTGTTTACAAAATCGATGGTGATTTAGTTTATTTATAGCAACCTGGATACCTTGTCTTTTGATTGGATTAAGGTTGTTTTGTTATTGACTCACTACTTGATTGCTATTTGTTTTGCAAATCTTTCTTGGGTATAATATGAATTCTGTGTTTTCTGAGCCCGTTCTGTAGCTGTTCTTGGACTGTTCAGTCTCAATCAAGTGTATATTTTGTATCCTTTATATGTAGAATGCAGAAATCTATGGAGTAATGGGGTTTTCTTTGAGGATTTATGTATAGATTGAGCTTTATTTGTTAGGTTTCTATACTTAGCATAATGTTTGTATGCTTAGAAACTGAAGCAGAAATGGAACTAGAATGTCCATTTGCAAGAATGTGCAAGTATATCAATCAAAGCATCACAAGTTTGGATGGACTTCTAAAAAAGTTTCTAGACATGGAGTTTGAAGCATGTTTGCTTTCAAAAGTTTCATTAATACTCGTAAACGGTTAAGAAATATCCATAACCTTACCGGTAGGATATGAATGGAAAACTTTTCCATTTTTCCCTCTTTTTTTACCATATCTTATTCAATATCCTCTTACTCCCCTTCTTTTGTTCTCCGATATCTAAAACGGCCCCTTCATTCAAGGTTATAGACTATAACAAGAAGAAGAAGAAAAAAATGGAATCACCAAGGGACCTTAGGACATAAATGTTTAACATGGTTATACGTTAGTAGTTGAGTGAGAGTTGATACGTTTACGACATAATTTTGAGGACAACTAGTGGGAGGAAAAAAGAAAGAAAACGTGTGCAATACCAAATTTGTAGAGATGAACTTTTCTTTGTAGTTCAAATTAGTCTATTTGTTGTCGTCGATTCAGAAGGTTTCTCAATAATCTAAGATGATATTTCTTTGTCAGCCTTTTTTGTATTCGACAATTCATCGTTTTGTTGTGTTTTGAGGGGAGATTCTGATATTGGGACTTGGTGGGGTTTTGTATAAGAAATTGTTAGGTTATAGATTGAAGCAAAGGAGAGAGGAAACGAAGGAGGGAGTTGATGGGTAAACGGTTTTCATCCATATACTAATCGTAAATGCATTTTGAGCTATTTTTTTTTGGAAAGGTTAAGGGTAATCAAACTCTTTTCGAGCTGATTTGGGAAGGAAACTGTAACGGCTCAAGCCCACCGCTAACAGATATTGCTTCCCTTCAACGCTTTAAAACTCGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACTAATGTGGGATATCACAATCCACCCCCCTTCAGGGCCCAGCGTCCTCAGTGACACTCGTTCCTTTCTCCAATCGATGTGGGACCCCCACCAAATCCACCCCCTTCAAGGCCCAGTGTCCTTACTGGCCCACTGCCTCGTGTCTACTCCCCTTCGGGGAACAACCTCCTCCCTGGCATATCGCTCGGTACTTGACTCTGATACCATCTGTAACGGCCCAAGCCCATCGCTAGCAGATATTGTCCTCTTTGAGTTTTCTCTTTCAGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAGAGATTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCAATTTAAATATTTTTATAGTTCAAATTTAGATATAAAATAGAAAACTGCAAAAGTTTTTTGAAGTTAAAAAATCAAGTAAAAAAAAAAACACTAAATGATTTTAATCAAAGTGTCAACTGTCAAGTCTAGATCTCTTCCAACCATGTGGGTGAAAGGATAGTTCCAAGAACATGGGAAAGGAGGAAACCGAACGACAATAAATGTCTTATTAAAAAACCAAGGCTTGTTTTTGCAGTACTAGGAGCAACCAAAGTACTGTTTTACAACGTTGTCTTGGCTGCAATTAATAAGTTACGTCAAAGTGCACTAAAATCAGCCATCAATATTTCAACAATTAATTTTGGACTTTCAAACATTATATTTCATCTAAAAATACTTCATTAAATTCAGATTGGATGTCAAGAAAATTCAAACTTCGATAGAAAATCTATAATTATTGATCAAATTCCTAAATGTCAACTAAAAAACGGGTTTAGACTCAATAAAAAAAAAAAAAAACTAAATGATTATAATCAAAGTGTCAAACTGTCGAGTCTAGATCTCTTCCAACCATGTGGGTGAAAGGATAGTTCCAAGAACATGGGAAAGGAGGAAACCAAACGACAATAAATGTCTTAATCAAAAACCAAGGCTTGTTTTTGCAGTACTAGGAGCAACCAAAGTACTGTTTTACAATGTTGTCTTGGCTGCAATTAATAAGTTAGGTCAAAGTGGCACTAAAATCAGCCATCAATATTTCAACAATTAATTTTAGACTTTGAAACATTATATTTCATCTAAAAATACTTCTTCGGATTGGATGTCATGAAAATTCAAATTTCTATAGAAAATCTATAATTATTGACCAAATTCCTAAATGTCAACTAAAAAACGGGTTTAGACTCAAAATTGAGAACCTCCAACTATAGATAGAAAAATTCTCATATGAAAAACGATGATTCTCGATCCTAATATTATGTTAAGCATACCATCAAATAAAATCAATCTAAAATACGGAGAGAAGATCAAGAAATGAACCCATTTGATCCGCTCTTAGCCACTAAAGTTTTGATTTTTTTGGCTCACAAATAGACTGAAAAATCAGTGAAACCAATCAGAAACAACTATAGATAGAGAAATTTTCATATGAAAAACATGATTCTCGATCTTAATATTATGTTAAGCAGACCATCAAATAAAATCAATCTAAAACACGGATAAAAAATCAAGAAATCAACTTATTTGCCTCCCTACTCTTAGTCACTAAAATTTTGATTTTTTTGGCTCACCCATAATCATAAACAACTAACCCAGTTGTAATTCATGATAAATTTTCCAAATCACAGTTTTATTCAGAGAAAGATTGCTAATGATGAACCACCCAAAGAAAATAGCCATCTACCACAAGAAGATGGCAAAATTGTAATTTCATAGTCTAAAAAAACCTTGATTTCTTTTCAAAAGAGGGTTTATTCTAAAAGAAAACAAAACTTTTAGAGTGCAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATTTGTATTTGTATCGATCTCAACCATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGGTTTCGTTTCATCCCCTTCCCCTTTTTCTCCTTCTTCCCCTCTCTTTTAATCCCTTCTTTGATCTGGGTTTTGTTGTTTACAAAATCGATGGTGATTTAGTTTATTTATAGCAACCTGGATACCTTGTCTTTTGATTGGATTAAGGTTGTTTTGTTATTGACTCACTACTTGATTGCTATTTGTTTTGCAAATCTTTCTTGGGTATAATATGAATTCTGTGTTTTCTGAGCCCGTTCTGTAGCTGTTCTTGGACTGTTCAGTCTCAATCAAGTGTATATTTTGTATCCTTTATATGTAGAATGCAGAAATCTATGGAGTAATGGGGTTTTCTTTGAGGATTTATGTATAGATTGAGCTTTATTTGTTAGGTTTCTATACTTAGCATAATGTTTGTATGCTTAGAAACTGAAGCAGAAATGGAACTAGAATGTCCATTTGCAAGAATGTGCAAGTATATCAATCAAAGCATCACAAGTTTGGATGGACTTCTAAAAAAGTTTCTAGACATGGAGTTTGAAGCATGTTTGCTTTCAAAAGTTTCATTAATACTCGTAAACGGTTAAGAAATATCCATAACCTTACCGGTACTATATGAATGGAAAACTTTTCCATTTTTCCCTCTTTTTTTACCATATCTTATTCAATATCCTCTTACTCCCCTTCTTTCGTTCTCCGATATCTAAAACGGCCCCTTCATTCAAGGTTATAGACTATAACAAGAAGAAGAAGAAAAAAATGGAATCACCAAGGGACCTTAGGACATAAATGTTTAACATGGTTATACGTTAGTAGTTGAGTGAGAGTTGATACGTTTACGACATAATTTTGAGGACAACTAGTGGGAGGAAAAAAGAAAGAAAACGTGTGCAATACCAAATTTGTAGAGATGAACTTTTCTTTGTAGTTCAAATTAGTCTATTTGTTGTCGTCGATTCAGAAGGTTTCTCAATAATCTAAGATGATATTTCTTTGTCAGCCTTTTTTGTATTCGACAATTCATCGTTTTGTTGTGTTTTGAGGGGAGATTCTGATATTGGGACTTGGTGGGGTTTTGTATAAGAAATTGTTAGGTTATAGATTGAAGCAAAGGAGAGAGGAAACGAAGGAGGGAGTTGATGGGTAAACGGTTTTCATCCATATACTAATCGTAAATGCATTTTGAGCTATTTTTTTTTGGAAAGGTTAAGGGTAATCAAACTCTTTTCGAGCTGATTTGGGAAGGAAACTGTAACGGCTCAAGCCCACCGCTAACAGATATTGCTTCCCTTCAACGCTTTAAAACTCGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACTAATGTGGGATATCACAATCCACCCCCCTTCAGGGCCCAGCGTCCTCAGTGACACTCGTTCCTTTCTCCAATCGATGTGGGACCCCCACCAAATCCACCCCCTTCAAGGCCCAGTGTCCTTACTGGCCCACTGCCTCGTGTCTACTCCCCTTCGGGGAACAACCTCCTCCCTGGCATATCGCTCGGTACTTGACTCTGATACCATCTGTAACGGCCCAAGCCCATCGCTAGCAGATATTGTCCTCTTTGAGTTTTCTCTTTCAGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAGAGATTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCAATGTGGGATACCACAGAAACAGTCCAATGAATTTCTAGATTTAGTTCTCATATGTTCGATTTTTCTATATACTTTTCTCTAATCATTCACTTCAAATGTTTCATTTTGATCTATAGAAGATCTTAATCTAAAGAACTGTTGAAGTTTTCCAACTTCGAAACATGTAGTTCATTTCCCTTTCCTTCCTCATGATTTCAGGAGCTTCAAGTGGTCTCGGTGAAGAGACGACACGTGTTCTTGCATTACGAGGAGTCTATGTCATTATGGCTGTAAGAAATGTTGAAGCAGGGAAAAAAGTAAAAGAAGCAGTACTGAAAGAATCCCCTTCAGCCAAAATTGATGTCATGGAGTTAGATCTTAGTTCAATGGAATCTGTAAGGAAATTTGCATCAGATTACATTGCATCAGGCCGTGCACTAAATATTCTCATGTAAGAACTGAATTAAAGCTGGTAGACTAAAATTCTTTGCCTGGGAAATCTGCTTATTTGATAATAATACAACTCTATATCTTCTTTGATTGAAGGAACAATGCGGGCGTTATGGCGACGCCTTTTATGCTTTCGCATGACGGCATAGAGTTGCAGTTTGCAACAAACCATATAGGTATGTTTCAAATAAAAGATTTGTAATGGGTGCAGTTCTTATTATTGTTCTTTTGTAGGACATTTTCTTCTGACGAACCTTCTGCTGGAAACTATGAAAAAAACTGTGGTTGAAAGCAAAAAGGAGGGAAGGATTGTTAATCTGTCGTCGGAGGGGCACCGATTGACATATGGCGAAGGAGTTCGTTTCGATAAAATCAATGACGAATCAGAGTAACGATCTACGTTGCTTATTTGATGATTACTTCCTCAAAAGCTTCCTTGAATGTTATGTAGTGATTCATTGTATGATGTGAAATTTTAGGTACAGAACTATCTTTGCTTATGGACAATCAAAGCTTTCCAACATATTGCATGCCAAAGAGCTTGCCAGGCGGTTGAAGGTGCTTATTGGTTTAGTTATTGAATGTATAACCAGAGCTTTAGAACTTGAACCTTAAATGAGGCAGGATTTTTATATGTACGATAATCGGGGTAGTCGAAGGGGGAATAATCAAGTGAACCTTGAAACTTATATCCTTTCGAGATTGAGTCGTTTTTCAGAATCGAGAAACTTTAGTCTTCGTCTGTATAGATGTTCAACTGGACACTCTAATTGTGAGATCACACATTGGTTGGAGAAGGAAACGAAGCATTCCTTATATGGGTTTGGAAACCTCTCCTTAGTAGACGCGTTTTAAAATCTTGAGGGGAAGCCTAAAGAGGACAATATTTGCTAACGGTGGGCTTGGGATGTTACAAATGATATCAGAGCCAGGCACCAAACGGTATACCAACGAGGACGTTGGACCCCCAAGGGGGTGGATTGTGAGATCCCCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGAATGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCTTGAGGGGAAGCCTAAAGAGGACAATATCTGCTCGCGGTAGGCTTGGGATGTTACAAATGATATCAGAGCCAGACACCAAACAGTATGCCAGCGAAGACTTTGAGGGAGCCTAAAAGGGAAAGCTCAAAGAGGACAATATCCGCTAGCGGTGGACTTGGGGTGTTACAAATGGTATCAGAGCGAGGCACTGAACAGTGTGCCAGCGAAGACGTTGGGCCCCCAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTATCCCTAGTAGACGCGTTTTAAAACTTTGAGGGAAAGCCTGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGAGCTTGGGCTGTTACACAATGGTTTACATTACTGATTTCGCTGCAGTTCCCTTTGTTCTTTCTTATTGATTTTCCAAGATATCTTATGAAGTCAAATTGAGTAAGTGACTATCATTTCTCTACTTTTTTTAAATAGGAAGAAGGGGTGGAAATAACAGCCAACGCCCTTCATCCTGGAGCAATTGCTGCTACCAACCTACTACGCTTCCATGGTCTCATTAATGGTAACTTTCTCGCGTATTACATGTATAAGCCAAATCTGGTTTACTAGATGCAAGACGTAAGGTCTGCCTTTTTACTTAAACTAGCACGAGTCAGATGTTTTTTTTATTTTTACATTAATCAGATGCTTGTTTAGACTGTAGAATATAGGGCATTTTAATTTGCATTTCGACCGAGGTGGTAGCTTATGGTTTGTCCGAGTATGTTTCGTTCCAAAGAAGGGTGCTAGCACCTGGACTCTAATATCTACATATATGGGTAGGAGATTTGAAAATCTCTAATCTTTTGGTCGAAGACATGTCTTAACTAGTTTTTACCTTAACTAGTTGAACTATGTTTAAATTGACGTATACATATTTAGTTTGACAAAATGTGTTTTGAACAAAGCTCCGACTCCCGGGTATTAAGAACAAAAAGTTTTTTGAACAAATATAAACATCTACCAGATTGCTATCTATGCTTCATTACCTTTTCTTATTTCCTGCTTATTTCCTGCCCTTGGTTTTCTGTCATCTGTTGGTGTCTGAGTATATGAGTTGTTTTCTTTTAAACAGCTGTTGCTACTTCCATTGCTACATTTGTGCTTAAAAACGTCCAGCAGGTATGTTATGAATTCATTTCCCCAAATTTTGTTCAAGACTGTTTATTTAGAGTTTCTCTCAGGTGGGTTTCTATGTGAATAAATTTTCATTGGATGTAGGGAGCGGCGACTCAGTGCTATGTAGCATTGAATCCCCAAGTCAAAGGGGTAAGTGGAGAGTATTTTGTGGATAGTAATATAGCCAACCCAACCAATCATGCCAAAGATATGGAATTGGCCAAGAAACTGTGGGATTTCAGTATGGATCTAACCACCCCTAAATAATTGTATCTCTTCTGAAAACCCTTCCTTACTCTTAGCTTCTCATCTCAGGCTCTTCATGTTAGAGATATATGGACAGTTTAATGGTGGAAGTAGATGAACCATTGTTTGTAGTTTTAAGTGCCACTTGAGAAACAGATACGAGTATAAGTTTGTAATGCTTTGTTTTGAAACAGATACCATAGTCATTCTTGTAGATTTCATATTGCTGTGTTTTAGAGTGTATTTGGAAAGGTGTTCATAATAAAGGCATATCCAACCAGCTCATGTAAAGCATTGCAAAGAAGTGTTAAATATAGTAATCAACTTTTTTGTGATTTCTACAAACTAATTCAAAATCAATAAAAGAAATAACTTTGAAAAGATCAAACACTAATCATTAACATATTCACACACTTTCTATCTATAGAGTAGTAATCTCTATTACAATTCAAATGAGGAGCCGAAACTCTGTGTTAATAGGACCCTGTTGAAGCTACACATTTCTATCAATCATTCTAATGATATCTGGCTTTGTTTTAGGTCATATTGTTGAAAAGAAAATGGCTTCTGGTTTGGCTCTTTCATGATTTGACCTCTATTTTACCTTCCAAACCCATCATTCCTCTAGCTGTTTGTCTAACATATCATGCAACACATTATGGGCAAGAGGAGATTCCAGAGGAAAAGCACCAGTTTGCTCAACTTCGCTGTGTCGTTGGGAAGAATGACCAGGCCCTAGTGGTCGTGCCTTCTGTCTCTATATCCTTTGCATTCGTCCACCGGTCTGAATTTACATATGGCTTAAGAGTATCACATCCATTGCCATGATCAAAATTGAATTCCTTCACAAACCCAATGGTAAGGGAGTGGTGTTGTTGATGCTGATGTGCTTGTTCACCGTTTGCTTTTGCATATTCTTCTGTACCATTTGAGGTATGACAGACAGCAGGAGAATTTTCTTTAGCCGTTTCAAATGGTTCATGTAATGGAGATGATGCAACTTCCAGTTCATTTGATTCCAGTGGCTTACTTCCTACGCTTCTTAATAAAGCATCTCCATCAGATAACTCAAATGAGAATCTATGATTAGCAGCAACAGGCTTCCTCCTTTCGGCTTCCATCAATGAGAATTCGAATACTTTGGGATTCATTTGTTGCGTGGTGATCTGACATAGATTCTGAAGTTTGGGGATTCAAAACAAAATCATTACTTGATTTGAATCCTATAGAATCTTGAGAGTAAGAATCAGTGCTTCGCCGTTGTTGCCAGCTATAAGTGGAACATTTGTCAAGGTCCAATAATGTAGGTGGAACTTCTAAATGGGAAATTCGAAAACTGAGAGCCAGAGGAAGCAAAATCACAATCAGGCAAAAGCGACTACGACCCAGAACGAGAAATGACTGACTGTGGTGGTATGCGGTGACTGATCGGGCTGCCAGGATAGGTAGTCATCATTAGGAAATGAACATTGATGATCAGGCTCAGGTTTCTGAAGGCTAGGTGGAAGAACCTAAGCAAAAGGAACTTCAAGGGAAGAAGGCCTAATCAAGTGGGTAGACAAAGGAGTGAAGGGAGCAGTTGATTCAAAGGTGGAGACACTAGCTATGTTTCATGAGCAAATGGGCCAATGGAAAAAATGGAGGAAGGCCCATCAGGAGAACACATGTTGCTGTAGGTGAATGAGTAGCAGAAGGTGGCTCAGATTGAAGGAAGGATACAGGGGAAGAGGGAGGGGTGCAGCAAGTGGAAGCTCAATGTCGGGTGAGTGCAATGAATCTTCTTCATGAGCCTCAGCTGAAGGAGGACTAGGTTCTGGTACCAACACACAGCGTGCACAACAACTCTTTTCCTCTGTTTGAGAGATCCAAAGCACCAATAAATACTCCAACAGCTACCCCATCTCCTTTTCTGAGGGCAAGCAAACAAAGAGAAAACGAGGAAAGTGATAATGACATCAGTACAGAACAGTGGAAAGAGCTTGGACAAATGAGAGCCCTATTTGTTGGAATCTTTATATAAAAACCAATACTCTTCCTCTATAGAGAATGACATTAATTTAAAGAATGGAGAGATGCCTTTCTGGTTAGAAAGAGCAGCGTTATTACAAGAAGACAAACAACATTGGGCTAGAACAGCGCATTGCTTCCTGACACAGTCGTCCAACCCAATGCACAAATCTTGGTACCTTCCAAACCCTAAGTATCTAATAATCATGCGAGGAGAAAGCCAAAAGCAGAAAAAGCAGAAAATCAGAAACGAAGCCAGCTCGTGATTCCGTGTATTCATGTAACGATTCGCAGTCCCTAAGCAAACAAACAGCA

mRNA sequence

AGAAAGATTGCTAATGATGAACCACCCAAAGAAAATAGCCATCTACCACAAGAAGATGGCAAAATTAGTGCAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATCTGTATTTGTATCGATCTCAACTATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATTTGTATTTGTATCGATCTCAACCATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGGAGCTTCAAGTGGTCTCGGTGAAGAGACGACACGTGTTCTTGCATTACGAGGAGTCTATGTCATTATGGCTGTAAGAAATGTTGAAGCAGGGAAAAAAGTAAAAGAAGCAGTACTGAAAGAATCCCCTTCAGCCAAAATTGATGTCATGGAGTTAGATCTTAGTTCAATGGAATCTGTAAGGAAATTTGCATCAGATTACATTGCATCAGGCCGTGCACTAAATATTCTCATGAACAATGCGGGCGTTATGGCGACGCCTTTTATGCTTTCGCATGACGGCATAGAGTTGCAGTTTGCAACAAACCATATAGGACATTTTCTTCTGACGAACCTTCTGCTGGAAACTATGAAAAAAACTGTGGTTGAAAGCAAAAAGGAGGGAAGGATTGTTAATCTGTCGTCGGAGGGGCACCGATTGACATATGGCGAAGGAGTTCGTTTCGATAAAATCAATGACGAATCAGAGTACAGAACTATCTTTGCTTATGGACAATCAAAGCTTTCCAACATATTGCATGCCAAAGAGCTTGCCAGGCGGTTGAAGGAAGAAGGGGTGGAAATAACAGCCAACGCCCTTCATCCTGGAGCAATTGCTGCTACCAACCTACTACGCTTCCATGGTCTCATTAATGCTGTTGCTACTTCCATTGCTACATTTGTGCTTAAAAACGTCCAGCAGGGAGCGGCGACTCAGTGCTATGTAGCATTGAATCCCCAAGTCAAAGGGGTAAGTGGAGAGTATTTTGTGGATAGTAATATAGCCAACCCAACCAATCATGCCAAAGATATGGAATTGGCCAAGAAACTGTGGGATTTCAGTATGGATCTAACCACCCCTAAATAATTGTATCTCTTCTGAAAACCCTTCCTTACTCTTAGCTTCTCATCTCAGGCTCTTCATGTTAGAGATATATGGACAGTTTAATGGTGGAAGTAGATGAACCATTGTTTGTAGTTTTAAGTGCCACTTGAGAAACAGATACGAGTATAAGTTTGTAATGCTTTGTTTTGAAACAGATACCATAGTCATTCTTGTAGATTTCATATTGCTGTGTTTTAGAGTGTATTTGGAAAGGTGTTCATAATAAAGGCATATCCAACCAGCTCATGTAAAGCATTGCAAAGAAGTGTTAAATATAGTAATCAACTTTTTTGTGATTTCTACAAACTAATTCAAAATCAATAAAAGAAATAACTTTGAAAAGATCAAACACTAATCATTAACATATTCACACACTTTCTATCTATAGAGTAGTAATCTCTATTACAATTCAAATGAGGAGCCGAAACTCTGTGTTAATAGGACCCTGTTGAAGCTACACATTTCTATCAATCATTCTAATGATATCTGGCTTTGTTTTAGGTCATATTGTTGAAAAGAAAATGGCTTCTGGTTTGGCTCTTTCATGATTTGACCTCTATTTTACCTTCCAAACCCATCATTCCTCTAGCTGTTTGTCTAACATATCATGCAACACATTATGGGCAAGAGGAGATTCCAGAGGAAAAGCACCAGTTTGCTCAACTTCGCTGTGTCGTTGGGAAGAATGACCAGGCCCTAGTGGTCGTGCCTTCTGTCTCTATATCCTTTGCATTCGTCCACCGGTCTGAATTTACATATGGCTTAAGAGTATCACATCCATTGCCATGATCAAAATTGAATTCCTTCACAAACCCAATGGTAAGGGAGTGGTGTTGTTGATGCTGATGTGCTTGTTCACCGTTTGCTTTTGCATATTCTTCTGTACCATTTGAGGTATGACAGACAGCAGGAGAATTTTCTTTAGCCGTTTCAAATGGTTCATGTAATGGAGATGATGCAACTTCCAGTTCATTTGATTCCAGTGGCTTACTTCCTACGCTTCTTAATAAAGCATCTCCATCAGATAACTCAAATGAGAATCTATGATTAGCAGCAACAGGCTTCCTCCTTTCGGCTTCCATCAATGAGAATTCGAATACTTTGGGATTCATTTGTTGCGTGGTGATCTGACATAGATTCTGAAGTTTGGGGATTCAAAACAAAATCATTACTTGATTTGAATCCTATAGAATCTTGAGAGTAAGAATCAGTGCTTCGCCGTTGTTGCCAGCTATAAGTGGAACATTTGTCAAGGTCCAATAATGTAGGTGGAACTTCTAAATGGGAAATTCGAAAACTGAGAGCCAGAGGAAGCAAAATCACAATCAGGCAAAAGCGACTACGACCCAGAACGAGAAATGACTGACTGTGGTGGTATGCGGTGACTGATCGGGCTGCCAGGATAGGTAGTCATCATTAGGAAATGAACATTGATGATCAGGCTCAGGTTTCTGAAGGCTAGGTGGAAGAACCTAAGCAAAAGGAACTTCAAGGGAAGAAGGCCTAATCAAGTGGGTAGACAAAGGAGTGAAGGGAGCAGTTGATTCAAAGGTGGAGACACTAGCTATGTTTCATGAGCAAATGGGCCAATGGAAAAAATGGAGGAAGGCCCATCAGGAGAACACATGTTGCTGTAGGTGAATGAGTAGCAGAAGGTGGCTCAGATTGAAGGAAGGATACAGGGGAAGAGGGAGGGGTGCAGCAAGTGGAAGCTCAATGTCGGGTGAGTGCAATGAATCTTCTTCATGAGCCTCAGCTGAAGGAGGACTAGGTTCTGGTACCAACACACAGCGTGCACAACAACTCTTTTCCTCTGTTTGAGAGATCCAAAGCACCAATAAATACTCCAACAGCTACCCCATCTCCTTTTCTGAGGGCAAGCAAACAAAGAGAAAACGAGGAAAGTGATAATGACATCAGTACAGAACAGTGGAAAGAGCTTGGACAAATGAGAGCCCTATTTGTTGGAATCTTTATATAAAAACCAATACTCTTCCTCTATAGAGAATGACATTAATTTAAAGAATGGAGAGATGCCTTTCTGGTTAGAAAGAGCAGCGTTATTACAAGAAGACAAACAACATTGGGCTAGAACAGCGCATTGCTTCCTGACACAGTCGTCCAACCCAATGCACAAATCTTGGTACCTTCCAAACCCTAAGTATCTAATAATCATGCGAGGAGAAAGCCAAAAGCAGAAAAAGCAGAAAATCAGAAACGAAGCCAGCTCGTGATTCCGTGTATTCATGTAACGATTCGCAGTCCCTAAGCAAACAAACAGCA

Coding sequence (CDS)

AGAAAGATTGCTAATGATGAACCACCCAAAGAAAATAGCCATCTACCACAAGAAGATGGCAAAATTAGTGCAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATCTGTATTTGTATCGATCTCAACTATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGTTTCAACGAGTACTCAAACCACAGAGTCTGGAGCAACACTAAGACGAGGGCCTTGCCGGATTCACCAATTTGTATTTGTATCGATCTCAACCATGTGGATCTTTGGATGGACCGGACCATCTGGGTTCTCAGCCCGTTCTACAGCAGAAGAAGTCACAGAAGGAATTGATGGGAATGGCCTCACTGCTATTGTTACAGGAGCTTCAAGTGGTCTCGGTGAAGAGACGACACGTGTTCTTGCATTACGAGGAGTCTATGTCATTATGGCTGTAAGAAATGTTGAAGCAGGGAAAAAAGTAAAAGAAGCAGTACTGAAAGAATCCCCTTCAGCCAAAATTGATGTCATGGAGTTAGATCTTAGTTCAATGGAATCTGTAAGGAAATTTGCATCAGATTACATTGCATCAGGCCGTGCACTAAATATTCTCATGAACAATGCGGGCGTTATGGCGACGCCTTTTATGCTTTCGCATGACGGCATAGAGTTGCAGTTTGCAACAAACCATATAGGACATTTTCTTCTGACGAACCTTCTGCTGGAAACTATGAAAAAAACTGTGGTTGAAAGCAAAAAGGAGGGAAGGATTGTTAATCTGTCGTCGGAGGGGCACCGATTGACATATGGCGAAGGAGTTCGTTTCGATAAAATCAATGACGAATCAGAGTACAGAACTATCTTTGCTTATGGACAATCAAAGCTTTCCAACATATTGCATGCCAAAGAGCTTGCCAGGCGGTTGAAGGAAGAAGGGGTGGAAATAACAGCCAACGCCCTTCATCCTGGAGCAATTGCTGCTACCAACCTACTACGCTTCCATGGTCTCATTAATGCTGTTGCTACTTCCATTGCTACATTTGTGCTTAAAAACGTCCAGCAGGGAGCGGCGACTCAGTGCTATGTAGCATTGAATCCCCAAGTCAAAGGGGTAAGTGGAGAGTATTTTGTGGATAGTAATATAGCCAACCCAACCAATCATGCCAAAGATATGGAATTGGCCAAGAAACTGTGGGATTTCAGTATGGATCTAACCACCCCTAAATAA

Protein sequence

RKIANDEPPKENSHLPQEDGKISAVSTSTQTTESGATLRRGPCRIHQSVFVSISTMWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTVSTSTQTTESGATLRRGPCRIHQFVFVSISTMWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLRFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDFSMDLTTPK

Homology

[Close]

BLAST of Cp4.1LG14g02170 vs. ExPASy Swiss-Prot
Match: A2RVM0 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 4.3e-117
Identity = 220/314 (70.06%), Postives = 258/314 (82.17%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MW FG  G SGFS+RSTAEEVT G+DG GLTAIVTGASSG+G ET RVL+LRGV+V+MAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN ++G KVKE ++K+ P AK+DVMELDLSSM+SVRKFAS+Y ++G  LN+L+NNAG+MA
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
            PFMLS D IELQFATNH+GHFLLT LLL+TMK T  ESK+EGRIVNLSSE HR +Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKIND+S Y ++ AYGQSKL N+LHA EL ++LKE+GV ITAN+LHPGAI  TNL R
Sbjct: 181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAI-MTNLGR 240

Query: 362 FHGLINAVAT-SIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 421
           +     AVA  ++A ++LK+V QGAAT CYVALNPQV GVSGEYF DSNIA P    KD 
Sbjct: 241 YFNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDT 300

Query: 422 ELAKKLWDFSMDLT 435
           ELAKK+WDFS  LT
Sbjct: 301 ELAKKVWDFSTKLT 313

[Close]

BLAST of Cp4.1LG14g02170 vs. ExPASy Swiss-Prot
Match: Q6RVV4 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC32 PE=1 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 4.0e-115
Identity = 215/317 (67.82%), Postives = 252/317 (79.50%), Query Frame = 0


Query: 122 MWIF-GWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMA 181
           MW F    G SGFS  STAE+VT GID  GLTAIVTGASSG+G ETTRVLALRG +VIM 
Sbjct: 1   MWPFSSKKGVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMG 60

Query: 182 VRNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVM 241
           VRN+ A K VK+ +LK+ PSAK+D +ELDLSS++SV+KFAS++ +SGR LNIL+NNAG+M
Sbjct: 61  VRNMVAAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIM 120

Query: 242 ATPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGE 301
           A PF LS D IELQFATNHIGHFLLTNLLL+TMKKT  ESKKEGRIVN++SE HR  Y E
Sbjct: 121 ACPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPE 180

Query: 302 GVRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLL 361
           G+RFDKIND+S Y    AYGQSKL+N+LHA +L + LKE+GV ITAN+LHPG I  TNL 
Sbjct: 181 GIRFDKINDQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTI-VTNLF 240

Query: 362 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 421
           R +  +N +   I   VLKNVQQGAAT CYVAL+PQVKGVSGEYF DSN+   T H KD+
Sbjct: 241 RHNSAVNGLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKDV 300

Query: 422 ELAKKLWDFSMDLTTPK 438
           +LAKKLWDFS++L   K
Sbjct: 301 DLAKKLWDFSINLVKQK 316

[Close]

BLAST of Cp4.1LG14g02170 vs. ExPASy Swiss-Prot
Match: A0A078ISJ6 (Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=TIC32B PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.5e-90
Identity = 176/310 (56.77%), Postives = 221/310 (71.29%), Query Frame = 0


Query: 124 IFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRN 183
           + G  G SG+ + STAE+VT  ID   LTAI+TG +SG+G E  RVL +RG +VI+A RN
Sbjct: 7   VTGKAGKSGYGSASTAEDVTHSIDAKHLTAIITGGTSGIGLEAARVLGMRGAHVIIAARN 66

Query: 184 VEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATP 243
            +A    KE +L+  P+A+ID ++LDLSS++SVR F   ++A    LNIL+NNAGVM  P
Sbjct: 67  TKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILINNAGVMFCP 126

Query: 244 FMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVR 303
           F LS DGIE QFATNHIGHFLLTNLLL+ MK +  ES  EGRIVNLSS  H  TY EG+ 
Sbjct: 127 FQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHTYTYTEGIM 186

Query: 304 FDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLRFH 363
           FD IND   Y    AYGQSKL+N+LH+  L+R+L+EEGV IT N++HPG I  TNL R  
Sbjct: 187 FDYINDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVHPGLI-TTNLFRHS 246

Query: 364 GLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELA 423
           GL  AV  +++ F+ KN+ QGAAT CYVAL+P +KGV+G+YF D N+  P+N A D  LA
Sbjct: 247 GLGMAVLKAMSFFLWKNIPQGAATTCYVALHPDLKGVTGKYFTDCNVTTPSNFAIDTTLA 306

Query: 424 KKLWDFSMDL 434
            KLWDFS+ L
Sbjct: 307 DKLWDFSIKL 315

[Close]

BLAST of Cp4.1LG14g02170 vs. ExPASy Swiss-Prot
Match: A0A078IS66 (Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=TIC32A PE=2 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.7e-89
Identity = 175/310 (56.45%), Postives = 220/310 (70.97%), Query Frame = 0


Query: 124 IFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRN 183
           + G  G SG+ + STAE+VT  ID   LTAI+TG +SG+G E  RVL +RG +VI+A RN
Sbjct: 7   VTGKAGKSGYGSASTAEDVTHSIDAKHLTAIITGGTSGIGLEAARVLGMRGAHVIIASRN 66

Query: 184 VEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATP 243
            +A    KE +L+  P+A+ID ++LDLSS++SVR F   ++A    LNIL+NNAGVM  P
Sbjct: 67  TKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILINNAGVMFCP 126

Query: 244 FMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVR 303
           F LS DGIE QFATNHIGHFLLTNLLL+ MK +  ES  EGRIVNLSS  H  TY EG+ 
Sbjct: 127 FQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHTYTYTEGIM 186

Query: 304 FDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLRFH 363
           FD IND   Y    AYGQSKL+N+LH+  L+R+L+EEGV IT N++HPG I  TNL R  
Sbjct: 187 FDYINDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVHPGLI-TTNLFRHS 246

Query: 364 GLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELA 423
           GL  AV  +++ F+ KN+ QGAAT CYVAL+P +K V+G+YF D N+  P+N A D  LA
Sbjct: 247 GLGMAVLKAMSFFLWKNIPQGAATTCYVALHPDLKDVTGKYFADCNVTTPSNFAIDTTLA 306

Query: 424 KKLWDFSMDL 434
            KLWDFS+ L
Sbjct: 307 DKLWDFSIKL 315

[Close]

BLAST of Cp4.1LG14g02170 vs. ExPASy Swiss-Prot
Match: Q9QYF1 (Retinol dehydrogenase 11 OS=Mus musculus OX=10090 GN=Rdh11 PE=1 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 1.8e-46
Identity = 113/291 (38.83%), Postives = 172/291 (59.11%), Query Frame = 0


Query: 143 TEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAVRNVEAGKKVKEAVLKESPSAK 202
           T  +   G  AIVTGA++G+G+ET + LA RG  V +A R+V+ G+     +   + +++
Sbjct: 31  TSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREIQAVTGNSQ 90

Query: 203 IDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMATPFMLSHDGIELQFATNHIGH 262
           + V +LDL+  +S+R FA D++A  + L++L+NNAGVM  P+  + DG E+    NH+GH
Sbjct: 91  VFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHIGVNHLGH 150

Query: 263 FLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEGVRFDKINDESEYRTIFAYGQS 322
           FLLT+LLLE +K++        RIVNLSS GH L     + F  +  E  Y    AY  S
Sbjct: 151 FLLTHLLLEKLKESA-----PSRIVNLSSLGHHL---GRIHFHNLQGEKFYSAGLAYCHS 210

Query: 323 KLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLRFHGLINAVATSIATFVLKNVQ 382
           KL+NIL  KELA+RLK  GV  T  ++HPG +  + L R+  ++  +      F+ K  Q
Sbjct: 211 KLANILFTKELAKRLKGSGV--TTYSVHPGTV-HSELTRYSSIMRWLWQLFFVFI-KTPQ 270

Query: 383 QGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDMELAKKLWDFSMDL 434
           +GA T  Y AL   ++ +SG +F D  +A  +   ++  +A++LWD S DL
Sbjct: 271 EGAQTSLYCALTEGLESLSGSHFSDCQLAWVSYQGRNEIIARRLWDVSCDL 309

[Close]

BLAST of Cp4.1LG14g02170 vs. NCBI nr
Match: XP_023552364.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552365.1 short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 617 bits (1591), Expect = 1.76e-220
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR
Sbjct: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME
Sbjct: 241 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 300

Query: 422 LAKKLWDFSMDLTTPK 437
           LAKKLWDFSMDLTTPK
Sbjct: 301 LAKKLWDFSMDLTTPK 316

[Close]

BLAST of Cp4.1LG14g02170 vs. NCBI nr
Match: XP_022984715.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 615 bits (1586), Expect = 1.02e-219
Identity = 314/316 (99.37%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGWTGPSGFSARSTA+EVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWTGPSGFSARSTAKEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR
Sbjct: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FHGLINAVATS+ATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME
Sbjct: 241 FHGLINAVATSVATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 300

Query: 422 LAKKLWDFSMDLTTPK 437
           LAKKLWDFSMDLTTPK
Sbjct: 301 LAKKLWDFSMDLTTPK 316

[Close]

BLAST of Cp4.1LG14g02170 vs. NCBI nr
Match: KAG6577191.1 (Short-chain dehydrogenase TIC 32, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 615 bits (1585), Expect = 1.45e-219
Identity = 314/316 (99.37%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNVEAGKKVKEAVLK+SPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLSHDG+ELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG
Sbjct: 121 TPFMLSHDGMELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR
Sbjct: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME
Sbjct: 241 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 300

Query: 422 LAKKLWDFSMDLTTPK 437
           LAKKLWDFSMDLTTPK
Sbjct: 301 LAKKLWDFSMDLTTPK 316

[Close]

BLAST of Cp4.1LG14g02170 vs. NCBI nr
Match: XP_022931508.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 612 bits (1579), Expect = 1.19e-218
Identity = 313/316 (99.05%), Postives = 315/316 (99.68%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLSHDG+ELQFATNHIGHFLLTNLLLETMKKTVVE KKEGRIVNLSSEGHRLTYGEG
Sbjct: 121 TPFMLSHDGMELQFATNHIGHFLLTNLLLETMKKTVVECKKEGRIVNLSSEGHRLTYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR
Sbjct: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FHGLINAVATSIATFVLKNV+QGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME
Sbjct: 241 FHGLINAVATSIATFVLKNVRQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 300

Query: 422 LAKKLWDFSMDLTTPK 437
           LAKKLWDFSMDLTTPK
Sbjct: 301 LAKKLWDFSMDLTTPK 316

[Close]

BLAST of Cp4.1LG14g02170 vs. NCBI nr
Match: KAG7015190.1 (Short-chain dehydrogenase TIC 32, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 598 bits (1542), Expect = 5.29e-213
Identity = 309/317 (97.48%), Postives = 312/317 (98.42%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNVEAGKKVKEAVLK+SPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVLKQSPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEE-GVEITANALHPGAIAATNLL 361
           VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLK   G+ I +NALHPGAIAATNLL
Sbjct: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKVLIGLVIESNALHPGAIAATNLL 240

Query: 362 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 421
           RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM
Sbjct: 241 RFHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 300

Query: 422 ELAKKLWDFSMDLTTPK 437
           ELAKKLWDFSMDLTTPK
Sbjct: 301 ELAKKLWDFSMDLTTPK 317

[Close]

BLAST of Cp4.1LG14g02170 vs. ExPASy TrEMBL
Match: A0A6J1J9D0 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482915 PE=3 SV=1)

HSP 1 Score: 615 bits (1586), Expect = 4.93e-220
Identity = 314/316 (99.37%), Postives = 316/316 (100.00%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGWTGPSGFSARSTA+EVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWTGPSGFSARSTAKEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR
Sbjct: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FHGLINAVATS+ATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME
Sbjct: 241 FHGLINAVATSVATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 300

Query: 422 LAKKLWDFSMDLTTPK 437
           LAKKLWDFSMDLTTPK
Sbjct: 301 LAKKLWDFSMDLTTPK 316

[Close]

BLAST of Cp4.1LG14g02170 vs. ExPASy TrEMBL
Match: A0A6J1EYV4 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111437662 PE=3 SV=1)

HSP 1 Score: 612 bits (1579), Expect = 5.74e-219
Identity = 313/316 (99.05%), Postives = 315/316 (99.68%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLSHDG+ELQFATNHIGHFLLTNLLLETMKKTVVE KKEGRIVNLSSEGHRLTYGEG
Sbjct: 121 TPFMLSHDGMELQFATNHIGHFLLTNLLLETMKKTVVECKKEGRIVNLSSEGHRLTYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR
Sbjct: 181 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FHGLINAVATSIATFVLKNV+QGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME
Sbjct: 241 FHGLINAVATSIATFVLKNVRQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 300

Query: 422 LAKKLWDFSMDLTTPK 437
           LAKKLWDFSMDLTTPK
Sbjct: 301 LAKKLWDFSMDLTTPK 316

[Close]

BLAST of Cp4.1LG14g02170 vs. ExPASy TrEMBL
Match: A0A6J1C4U8 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111008286 PE=3 SV=1)

HSP 1 Score: 573 bits (1477), Expect = 1.86e-203
Identity = 290/316 (91.77%), Postives = 306/316 (96.84%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW GPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV
Sbjct: 1   MWIFGWKGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNVEAGKKVKEAV +E PSAKID+MELDLSSMESVRKFASDYI+SGRALNILMNNAGVMA
Sbjct: 61  RNVEAGKKVKEAVCQEFPSAKIDIMELDLSSMESVRKFASDYISSGRALNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPFMLSHDGIELQFATNH+GHFLLTNLLL+TMKKTV+ESKKEGRIVNL+SEGHR+TYGEG
Sbjct: 121 TPFMLSHDGIELQFATNHLGHFLLTNLLLDTMKKTVLESKKEGRIVNLASEGHRVTYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RFDKINDESEYRTI AYGQSKLSNILHAKELARRLKEEGVEITAN+LHPGAI  TNLLR
Sbjct: 181 IRFDKINDESEYRTILAYGQSKLSNILHAKELARRLKEEGVEITANSLHPGAII-TNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FHGLINAVA S+A FVLKNVQQGAATQCYVAL+PQVKGVSGEYF DSNI+NPTNHAKD E
Sbjct: 241 FHGLINAVAGSVAKFVLKNVQQGAATQCYVALHPQVKGVSGEYFADSNISNPTNHAKDKE 300

Query: 422 LAKKLWDFSMDLTTPK 437
           LAKKLWDFS++LT+PK
Sbjct: 301 LAKKLWDFSVELTSPK 315

[Close]

BLAST of Cp4.1LG14g02170 vs. ExPASy TrEMBL
Match: A0A5D3D084 (Short-chain dehydrogenase TIC 32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004620 PE=3 SV=1)

HSP 1 Score: 570 bits (1470), Expect = 2.16e-202
Identity = 290/316 (91.77%), Postives = 302/316 (95.57%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW GPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEE+TRVLALRGVYVIMAV
Sbjct: 1   MWIFGWKGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEESTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNVEAG+KVKEAVLKESPSAKIDVMELDLSSMESVRKFA+DYIASGR LNILMNNAGVMA
Sbjct: 61  RNVEAGRKVKEAVLKESPSAKIDVMELDLSSMESVRKFAADYIASGRPLNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPF LSHDGIELQFATNH+GHFLLTNLLLETMKKTV+ESKKEGRIVNLSSEGHR+ YGEG
Sbjct: 121 TPFTLSHDGIELQFATNHLGHFLLTNLLLETMKKTVLESKKEGRIVNLSSEGHRMAYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RFDKIN+E+EYRTI AYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIA TNLLR
Sbjct: 181 IRFDKINNEAEYRTILAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIA-TNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FH  INAV   +A FVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPT HAKDM+
Sbjct: 241 FHSTINAVTNLVAKFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTKHAKDMD 300

Query: 422 LAKKLWDFSMDLTTPK 437
           LAKKLWDFS+DLT PK
Sbjct: 301 LAKKLWDFSVDLTNPK 315

[Close]

BLAST of Cp4.1LG14g02170 vs. ExPASy TrEMBL
Match: A0A1S3BU18 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103493161 PE=3 SV=1)

HSP 1 Score: 570 bits (1470), Expect = 2.16e-202
Identity = 290/316 (91.77%), Postives = 302/316 (95.57%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MWIFGW GPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEE+TRVLALRGVYVIMAV
Sbjct: 1   MWIFGWKGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEESTRVLALRGVYVIMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RNVEAG+KVKEAVLKESPSAKIDVMELDLSSMESVRKFA+DYIASGR LNILMNNAGVMA
Sbjct: 61  RNVEAGRKVKEAVLKESPSAKIDVMELDLSSMESVRKFAADYIASGRPLNILMNNAGVMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
           TPF LSHDGIELQFATNH+GHFLLTNLLLETMKKTV+ESKKEGRIVNLSSEGHR+ YGEG
Sbjct: 121 TPFTLSHDGIELQFATNHLGHFLLTNLLLETMKKTVLESKKEGRIVNLSSEGHRMAYGEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           +RFDKIN+E+EYRTI AYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIA TNLLR
Sbjct: 181 IRFDKINNEAEYRTILAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIA-TNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           FH  INAV   +A FVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPT HAKDM+
Sbjct: 241 FHSTINAVTNLVAKFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTKHAKDMD 300

Query: 422 LAKKLWDFSMDLTTPK 437
           LAKKLWDFS+DLT PK
Sbjct: 301 LAKKLWDFSVDLTNPK 315

[Close]

BLAST of Cp4.1LG14g02170 vs. TAIR 10
Match: AT4G11410.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 430.6 bits (1106), Expect = 1.5e-120
Identity = 216/313 (69.01%), Postives = 257/313 (82.11%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MW F W G SGFSARSTAEEVT GIDG GLTAIVTGASSG+GEETTRVLALRGV+V+MAV
Sbjct: 1   MWPFWWKGASGFSARSTAEEVTHGIDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN ++G +V++ +LKE P AKIDVM+LDLSSM SVR FAS+Y +    LN+L+NNAG+MA
Sbjct: 61  RNTDSGNQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
            PF+LS D IELQFATNH+GHFLLTNLLLE MKKT  ES +EGRIV +SSEGHR  Y EG
Sbjct: 121 CPFLLSSDNIELQFATNHLGHFLLTNLLLERMKKTASESNREGRIVIVSSEGHRFAYREG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           V+FDKINDE+ Y T+ AYGQSKL NILHA ELAR  KE+GV ITAN+LHPG+I  TNLLR
Sbjct: 181 VQFDKINDEARYNTLQAYGQSKLGNILHATELARLFKEQGVNITANSLHPGSI-MTNLLR 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           +H  IN +  ++  +VLK++ QGAAT CY AL+PQ KGVSGEY +D+NI++P +  KD +
Sbjct: 241 YHSFINTIGNAVGKYVLKSIPQGAATTCYAALHPQAKGVSGEYLMDNNISDPNSQGKDKD 300

Query: 422 LAKKLWDFSMDLT 435
           LAKKLW+FS+ LT
Sbjct: 301 LAKKLWEFSLRLT 312

[Close]

BLAST of Cp4.1LG14g02170 vs. TAIR 10
Match: AT4G23430.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 422.9 bits (1086), Expect = 3.1e-118
Identity = 220/314 (70.06%), Postives = 258/314 (82.17%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MW FG  G SGFS+RSTAEEVT G+DG GLTAIVTGASSG+G ET RVL+LRGV+V+MAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN ++G KVKE ++K+ P AK+DVMELDLSSM+SVRKFAS+Y ++G  LN+L+NNAG+MA
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
            PFMLS D IELQFATNH+GHFLLT LLL+TMK T  ESK+EGRIVNLSSE HR +Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKIND+S Y ++ AYGQSKL N+LHA EL ++LKE+GV ITAN+LHPGAI  TNL R
Sbjct: 181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAI-MTNLGR 240

Query: 362 FHGLINAVAT-SIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 421
           +     AVA  ++A ++LK+V QGAAT CYVALNPQV GVSGEYF DSNIA P    KD 
Sbjct: 241 YFNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDT 300

Query: 422 ELAKKLWDFSMDLT 435
           ELAKK+WDFS  LT
Sbjct: 301 ELAKKVWDFSTKLT 313

[Close]

BLAST of Cp4.1LG14g02170 vs. TAIR 10
Match: AT4G23420.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 422.5 bits (1085), Expect = 4.0e-118
Identity = 217/313 (69.33%), Postives = 253/313 (80.83%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MW FG  G SGFS+RSTAEEVT G+DG GLTAIVTGASSG+G ET RVLALRGV+V+MAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLALRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN  AG KVKE ++K+ P AK+DVMEL+LSSMESVRKFAS+Y ++G  LN+L+NNAG+MA
Sbjct: 61  RNTGAGAKVKEDIVKQVPGAKVDVMELELSSMESVRKFASEYKSAGLPLNLLINNAGIMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
            PFMLS D IELQFATNH+GHFLLT LLL+TMK T  ESK+EGRIVN+SSE HR +Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKNTSRESKREGRIVNVSSEAHRYSYPEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKINDES Y +I AYGQSKL N+LHA ELA++LKE+GV ITAN+LHPGAI       
Sbjct: 181 VRFDKINDESSYSSIRAYGQSKLCNVLHANELAKQLKEDGVNITANSLHPGAIMTNLWGY 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           F+  +     ++A +++K+V QGAAT CYVALNPQV GV+GEYF DSNIA P    KD E
Sbjct: 241 FNSYLAGAVGAVAKYMVKSVPQGAATTCYVALNPQVAGVTGEYFSDSNIAKPIELVKDTE 300

Query: 422 LAKKLWDFSMDLT 435
           LAKKLWDFS  LT
Sbjct: 301 LAKKLWDFSTKLT 313

[Close]

BLAST of Cp4.1LG14g02170 vs. TAIR 10
Match: AT4G23420.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 422.5 bits (1085), Expect = 4.0e-118
Identity = 217/313 (69.33%), Postives = 253/313 (80.83%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MW FG  G SGFS+RSTAEEVT G+DG GLTAIVTGASSG+G ET RVLALRGV+V+MAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLALRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN  AG KVKE ++K+ P AK+DVMEL+LSSMESVRKFAS+Y ++G  LN+L+NNAG+MA
Sbjct: 61  RNTGAGAKVKEDIVKQVPGAKVDVMELELSSMESVRKFASEYKSAGLPLNLLINNAGIMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
            PFMLS D IELQFATNH+GHFLLT LLL+TMK T  ESK+EGRIVN+SSE HR +Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKNTSRESKREGRIVNVSSEAHRYSYPEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKINDES Y +I AYGQSKL N+LHA ELA++LKE+GV ITAN+LHPGAI       
Sbjct: 181 VRFDKINDESSYSSIRAYGQSKLCNVLHANELAKQLKEDGVNITANSLHPGAIMTNLWGY 240

Query: 362 FHGLINAVATSIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDME 421
           F+  +     ++A +++K+V QGAAT CYVALNPQV GV+GEYF DSNIA P    KD E
Sbjct: 241 FNSYLAGAVGAVAKYMVKSVPQGAATTCYVALNPQVAGVTGEYFSDSNIAKPIELVKDTE 300

Query: 422 LAKKLWDFSMDLT 435
           LAKKLWDFS  LT
Sbjct: 301 LAKKLWDFSTKLT 313

[Close]

BLAST of Cp4.1LG14g02170 vs. TAIR 10
Match: AT4G23430.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 415.6 bits (1067), Expect = 4.9e-116
Identity = 219/314 (69.75%), Postives = 257/314 (81.85%), Query Frame = 0


Query: 122 MWIFGWTGPSGFSARSTAEEVTEGIDGNGLTAIVTGASSGLGEETTRVLALRGVYVIMAV 181
           MW FG  G SGFS+RSTAEEVT G+DG GLTAIVTGASSG+G ET RVL+LRGV+V+MAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 182 RNVEAGKKVKEAVLKESPSAKIDVMELDLSSMESVRKFASDYIASGRALNILMNNAGVMA 241
           RN ++G KVKE ++K+ P AK+DVMELDLSSM+SVRKFAS+Y ++G  LN+L+NNAG+MA
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 242 TPFMLSHDGIELQFATNHIGHFLLTNLLLETMKKTVVESKKEGRIVNLSSEGHRLTYGEG 301
            PFMLS D IELQFATNH+GHFLLT LLL+TMK T  ESK+EGRIVNLSSE HR +Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 302 VRFDKINDESEYRTIFAYGQSKLSNILHAKELARRLKEEGVEITANALHPGAIAATNLLR 361
           VRFDKIND+S   ++ AYGQSKL N+LHA EL ++LKE+GV ITAN+LHPGAI  TNL R
Sbjct: 181 VRFDKINDKSS--SMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAI-MTNLGR 240

Query: 362 FHGLINAVAT-SIATFVLKNVQQGAATQCYVALNPQVKGVSGEYFVDSNIANPTNHAKDM 421
           +     AVA  ++A ++LK+V QGAAT CYVALNPQV GVSGEYF DSNIA P    KD 
Sbjct: 241 YFNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDT 300

Query: 422 ELAKKLWDFSMDLT 435
           ELAKK+WDFS  LT
Sbjct: 301 ELAKKVWDFSTKLT 311

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g02170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2RVM0	4.3e-117	70.06	Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6RVV4	4.0e-115	67.82	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC3...	[more]
A0A078ISJ6	1.5e-90	56.77	Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
A0A078IS66	1.7e-89	56.45	Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
Q9QYF1	1.8e-46	38.83	Retinol dehydrogenase 11 OS=Mus musculus OX=10090 GN=Rdh11 PE=1 SV=2	[more]

BLAST of Cp4.1LG14g02170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552364.1	1.76e-220	100.00	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita pepo ...	[more]
XP_022984715.1	1.02e-219	99.37	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima]	[more]
KAG6577191.1	1.45e-219	99.37	Short-chain dehydrogenase TIC 32, chloroplastic, partial [Cucurbita argyrosperma...	[more]
XP_022931508.1	1.19e-218	99.05	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata]	[more]
KAG7015190.1	5.29e-213	97.48	Short-chain dehydrogenase TIC 32, chloroplastic [Cucurbita argyrosperma subsp. a...	[more]

BLAST of Cp4.1LG14g02170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J9D0	4.93e-220	99.37	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1EYV4	5.74e-219	99.05	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1C4U8	1.86e-203	91.77	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Momordica charantia OX=3...	[more]
A0A5D3D084	2.16e-202	91.77	Short-chain dehydrogenase TIC 32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BU18	2.16e-202	91.77	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of Cp4.1LG14g02170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11410.1	1.5e-120	69.01	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23430.2	3.1e-118	70.06	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23420.1	4.0e-118	69.33	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23420.2	4.0e-118	69.33	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23430.1	4.9e-116	69.75	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 278..294 score: 30.31 coord: 152..169 score: 40.58 coord: 319..338 score: 27.16 coord: 342..359 score: 29.08 coord: 228..239 score: 44.33
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 152..293 e-value: 2.7E-23 score: 82.5
None	No IPR available	GENE3D	3.40.50.720		coord: 145..436 e-value: 1.2E-73 score: 249.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR24320:SF230	NAD(P)-BINDING ROSSMANN-FOLD PROTEIN	coord: 123..434
None	No IPR available	PANTHER	PTHR24320:SF230	NAD(P)-BINDING ROSSMANN-FOLD PROTEIN	coord: 57..100
None	No IPR available	PANTHER	PTHR24320	RETINOL DEHYDROGENASE	coord: 57..100
None	No IPR available	PANTHER	PTHR24320	RETINOL DEHYDROGENASE	coord: 123..434
None	No IPR available	CDD	cd05327	retinol-DH_like_SDR_c_like	coord: 150..427 e-value: 4.09495E-98 score: 292.976
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 150..411

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g02170.1	Cp4.1LG14g02170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity