Cp4.1LG13g11500 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g11500
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	gibberellin-regulated protein 9
Location	Cp4.1LG13: 9165327 .. 9166677 (+)
RNA-Seq Expression	Cp4.1LG13g11500
Synteny	Cp4.1LG13g11500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAGGCAAGCCATTGCAGTTTACTACTACATCAAAATTTGGGGATATCTTCTTCAGAAATGAAGCCACTCAGTGTTCTTTGCACTTTCGTTCTCCTTCTCCTTTTCTTGCAGGTATTATATATATATATATATATATATATTAAATATTTTATATTTTATTTTCCGGTAACCAATTAATAAACTTTATTTTCTTTCTATATTCTGTTGAAGGGTCTTTCAGAGGCTTTCACTAATGTGAGTATCCTCCATCTCTCATTTGCCCCTTCCATCACCTTTCAAGTTTTGGAATTCATTGGATCAAAATTTTGAGATAATATTGTTGTTGTTGAAATTATTTTGATCATGTAGTAGTAATTTAACATTGTACGAGACGAGACACTGTTTTAGGCATATAGATAGAAAAACGTTGACGAGTTTATAGAAGTTTGAGTTTGTGTATTCTTTATTGTTTATTAATAATATCGGGTTTATTCGTGTTCATAATCAAATACTGACGTTGAGTTCAGGTGAATGAAGGGACCAACACGACAGCTCTCAACAAAAAGCATATCTATTCTCCAAAAATAAGTAAGTTGTCATGTAATCCAACAATATTTAAAATAAAATAAAATAAAATAAAAAGAATTTTACGATTTCAATTACTTTTTAAATATAAAATAAAAATTATAAAAAATAAAATACAAAATTTGAAACTTATACTGTGATGGGATTGGATTAGATTGCAAATATGCATGCTCAAGGCGATGCATGAAAGTGAGGAGAAAGAAGATATGTATGCGGGCTTGCGGAAGTTGCTGCAGTCGGTGCCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGCTTGCCCTTGCTATGCTCGCCTCAGGACCCACGGCAATAGGCTCAAGTGCCCCTAAATTCCCATTGTTCTCTTCTTCTACCATATTTTCATTTTATGTTTGGAGCTGGTTCTATTTTATGCTATTTTCCGTTGATATTCAGACAATTTAAATACTCATAAATGTGGTTAAAAAAAATATATATATATATATATCACTGGTGCTTTTGTTGTGTCGTTATAAGGGCAGTGAATTATGTCTTTTGTTGTGTTCGTCAGAAGGGTGGTTGATTATGTAATTTGTTTTGTGATTGATAATAAATGAAGTGATTAAATATATGACTTTATTTTCTTATTTTTCTTATTTATTTTGTGCATAATAAGTCTTGAATTTTAAGAGTGTGTTAATATGTTCCTAAATTTACAATGTAGTGTCCGAAAAATTCTTCCATTAAAAAAAAAAATGTCTAATGTGCTTATAAAGTTACAATTTAAAGTTAAATAATTTATTAAATATGACGAAACTTA

mRNA sequence

TGAAGGCAAGCCATTGCAGTTTACTACTACATCAAAATTTGGGGATATCTTCTTCAGAAATGAAGCCACTCAGTGTTCTTTGCACTTTCGTTCTCCTTCTCCTTTTCTTGCAGGGTCTTTCAGAGGCTTTCACTAATGTGAATGAAGGGACCAACACGACAGCTCTCAACAAAAAGCATATCTATTCTCCAAAAATAAATTGCAAATATGCATGCTCAAGGCGATGCATGAAAGTGAGGAGAAAGAAGATATGTATGCGGGCTTGCGGAAGTTGCTGCAGTCGGTGCCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGCTTGCCCTTGCTATGCTCGCCTCAGGACCCACGGCAATAGGCTCAAGTGCCCCTAAATTCCCATTGTTCTCTTCTTCTACCATATTTTCATTTTATGTTTGGAGCTGGTTCTATTTTATGCTATTTTCCGTTGATATTCAGACAATTTAAATACTCATAAATGTGGTTAAAAAAAATATATATATATATATATCACTGGTGCTTTTGTTGTGTCGTTATAAGGGCAGTGAATTATGTCTTTTGTTGTGTTCGTCAGAAGGGTGGTTGATTATGTAATTTGTTTTGTGATTGATAATAAATGAAGTGATTAAATATATGACTTTATTTTCTTATTTTTCTTATTTATTTTGTGCATAATAAGTCTTGAATTTTAAGAGTGTGTTAATATGTTCCTAAATTTACAATGTAGTGTCCGAAAAATTCTTCCATTAAAAAAAAAAATGTCTAATGTGCTTATAAAGTTACAATTTAAAGTTAAATAATTTATTAAATATGACGAAACTTA

Coding sequence (CDS)

ATGAAGCCACTCAGTGTTCTTTGCACTTTCGTTCTCCTTCTCCTTTTCTTGCAGGGTCTTTCAGAGGCTTTCACTAATGTGAATGAAGGGACCAACACGACAGCTCTCAACAAAAAGCATATCTATTCTCCAAAAATAAATTGCAAATATGCATGCTCAAGGCGATGCATGAAAGTGAGGAGAAAGAAGATATGTATGCGGGCTTGCGGAAGTTGCTGCAGTCGGTGCCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGCTTGCCCTTGCTATGCTCGCCTCAGGACCCACGGCAATAGGCTCAAGTGCCCCTAA

Protein sequence

MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP

Homology

[Close]

BLAST of Cp4.1LG13g11500 vs. ExPASy Swiss-Prot
Match: Q8GWK5 (Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-25
Identity = 54/110 (49.09%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 4   LSVLCTFVLLLLFLQGLSEAFTN-------VNEGTNTTALNKKHIYSPKINCKYACSRRC 63
           ++++ +F+LL   L  LS +  N        N+   T A  + + + P+INC +AC+RRC
Sbjct: 10  VTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRC 69

Query: 64  MKVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 107
            K  RKK+C RACGSCC++C CVPPGT GN  +CPCYA +RTHGN+LKCP
Sbjct: 70  SKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Cp4.1LG13g11500 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-19
Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 38  KKHIYSPKINCKYACSRRCMKVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLR 97
           KK+ Y+ KI+C  AC  RC   RR ++C RACG+CC RC+CVPPGTYGN+  C CYA L 
Sbjct: 30  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 89

Query: 98  THGNRLKCP 107
           THG R KCP
Sbjct: 90  THGGRRKCP 98

[Close]

BLAST of Cp4.1LG13g11500 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.5e-19
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 10  FVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVRRKKICMRAC 69
           F  LLL L  L +  +   +   + A+++      KI+C  AC+ RC    R ++C RAC
Sbjct: 8   FASLLLSLLLLEQVQSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRLSSRPRLCNRAC 67

Query: 70  GSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 107
           G+CC+RC+CVPPGT GN + CPCYA L THGN+ KCP
Sbjct: 68  GTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of Cp4.1LG13g11500 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 40/62 (64.52%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 45  KINCKYACSRRCMKVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLK 104
           KI+C   C  RC K  R K+C+RAC SCCSRC+CVPPGT GN   CPCYA + THG RLK
Sbjct: 38  KIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLK 97

Query: 105 CP 107
           CP
Sbjct: 98  CP 99

[Close]

BLAST of Cp4.1LG13g11500 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.6e-17
Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 45  KINCKYACSRRCMKVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLK 104
           KI+C   C  RC K  R  +C+RAC SCC RC+CVPPGT GNH  CPCYA + T G RLK
Sbjct: 38  KIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLK 97

Query: 105 CP 107
           CP
Sbjct: 98  CP 99

[Close]

BLAST of Cp4.1LG13g11500 vs. NCBI nr
Match: XP_023550961.1 (gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226 bits (577), Expect = 1.27e-74
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVR 60
           MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVR
Sbjct: 21  MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVR 80

Query: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106
           RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP
Sbjct: 81  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 126

[Close]

BLAST of Cp4.1LG13g11500 vs. NCBI nr
Match: XP_022938854.1 (gibberellin-regulated protein 9 [Cucurbita moschata] >KAG6578328.1 Gibberellin-regulated protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223 bits (567), Expect = 2.22e-73
Identity = 104/106 (98.11%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVR 60
           MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNT AL+KKHIYSPKINCKYACSRRCMKVR
Sbjct: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTAALDKKHIYSPKINCKYACSRRCMKVR 60

Query: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106
           RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP
Sbjct: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106

[Close]

BLAST of Cp4.1LG13g11500 vs. NCBI nr
Match: XP_022993114.1 (gibberellin-regulated protein 9-like [Cucurbita maxima])

HSP 1 Score: 218 bits (556), Expect = 2.03e-71
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVR 60
           MKPLSVLCTFVLLLLFLQGLSEA TNVNEGTNT AL+KKHIYSPKINCKYACSRRCMKVR
Sbjct: 21  MKPLSVLCTFVLLLLFLQGLSEASTNVNEGTNTAALDKKHIYSPKINCKYACSRRCMKVR 80

Query: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106
           RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGN+LKCP
Sbjct: 81  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNKLKCP 126

[Close]

BLAST of Cp4.1LG13g11500 vs. NCBI nr
Match: XP_038885058.1 (gibberellin-regulated protein 9-like [Benincasa hispida])

HSP 1 Score: 182 bits (463), Expect = 1.63e-57
Identity = 83/106 (78.30%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVR 60
           MKPLS+LC F++L + LQG SEAFT V+EGTNT AL KK+ Y PKINCK  CSRRC KV 
Sbjct: 1   MKPLSLLCIFIILSILLQGFSEAFTTVDEGTNTVALTKKYHYHPKINCKRECSRRCSKVF 60

Query: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106
           RKKICMRACG+CCSRCHCVPPGTYGNHQACPCYARL+THGN+ KCP
Sbjct: 61  RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLKTHGNKPKCP 106

[Close]

BLAST of Cp4.1LG13g11500 vs. NCBI nr
Match: XP_008441216.1 (PREDICTED: gibberellin-regulated protein 9 [Cucumis melo])

HSP 1 Score: 179 bits (454), Expect = 3.85e-56
Identity = 82/106 (77.36%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVR 60
           MKPLS+LC F++L   LQG SEA T V+ GTNT AL+KK+ Y PKINCK  CSRRC KV 
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF 60

Query: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106
           RKKICMRACG+CCSRCHCVPPGTYGNHQACPCYARLRTHGN+ KCP
Sbjct: 61  RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Cp4.1LG13g11500 vs. ExPASy TrEMBL
Match: A0A6J1FFC2 (gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE=3 SV=1)

HSP 1 Score: 223 bits (567), Expect = 1.07e-73
Identity = 104/106 (98.11%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVR 60
           MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNT AL+KKHIYSPKINCKYACSRRCMKVR
Sbjct: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTAALDKKHIYSPKINCKYACSRRCMKVR 60

Query: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106
           RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP
Sbjct: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106

[Close]

BLAST of Cp4.1LG13g11500 vs. ExPASy TrEMBL
Match: A0A6J1JZB3 (gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231 PE=3 SV=1)

HSP 1 Score: 218 bits (556), Expect = 9.82e-72
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVR 60
           MKPLSVLCTFVLLLLFLQGLSEA TNVNEGTNT AL+KKHIYSPKINCKYACSRRCMKVR
Sbjct: 21  MKPLSVLCTFVLLLLFLQGLSEASTNVNEGTNTAALDKKHIYSPKINCKYACSRRCMKVR 80

Query: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106
           RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGN+LKCP
Sbjct: 81  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNKLKCP 126

[Close]

BLAST of Cp4.1LG13g11500 vs. ExPASy TrEMBL
Match: A0A0A0LMS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1)

HSP 1 Score: 179 bits (454), Expect = 1.86e-56
Identity = 82/106 (77.36%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVR 60
           MKPLS+LC F++L   LQG SEA   V+EGTNT AL KK+ Y PKINCK  CSRRC KV 
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEAIATVDEGTNTVALTKKYHYQPKINCKSECSRRCSKVF 60

Query: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106
           RKKICMRACG+CCSRCHCVPPGTYGNHQACPCYARLRTHGN+ KCP
Sbjct: 61  RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Cp4.1LG13g11500 vs. ExPASy TrEMBL
Match: A0A1S3B2G6 (gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=1)

HSP 1 Score: 179 bits (454), Expect = 1.86e-56
Identity = 82/106 (77.36%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 1   MKPLSVLCTFVLLLLFLQGLSEAFTNVNEGTNTTALNKKHIYSPKINCKYACSRRCMKVR 60
           MKPLS+LC F++L   LQG SEA T V+ GTNT AL+KK+ Y PKINCK  CSRRC KV 
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVF 60

Query: 61  RKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106
           RKKICMRACG+CCSRCHCVPPGTYGNHQACPCYARLRTHGN+ KCP
Sbjct: 61  RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Cp4.1LG13g11500 vs. ExPASy TrEMBL
Match: A0A6J1DG94 (gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 PE=3 SV=1)

HSP 1 Score: 168 bits (425), Expect = 5.41e-52
Identity = 79/109 (72.48%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 1   MKPLSVLCTFVLLLLFLQGLSEA---FTNVNEGTNTTALNKKHIYSPKINCKYACSRRCM 60
           MKP+S L   +LLL  LQ LSEA   ++ VN+G+N  A++KKH  SPKINCKYACSRRCM
Sbjct: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60

Query: 61  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106
           K  RKKICMRACGSCCSRCHCVPPGTYGNHQ CPCYARL+TH N+ KCP
Sbjct: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 109

[Close]

BLAST of Cp4.1LG13g11500 vs. TAIR 10
Match: AT1G22690.1 (Gibberellin-regulated family protein )

HSP 1 Score: 117.1 bits (292), Expect = 8.7e-27
Identity = 54/110 (49.09%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 4   LSVLCTFVLLLLFLQGLSEAFTN-------VNEGTNTTALNKKHIYSPKINCKYACSRRC 63
           ++++ +F+LL   L  LS +  N        N+   T A  + + + P+INC +AC+RRC
Sbjct: 10  VTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRC 69

Query: 64  MKVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 107
            K  RKK+C RACGSCC++C CVPPGT GN  +CPCYA +RTHGN+LKCP
Sbjct: 70  SKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Cp4.1LG13g11500 vs. TAIR 10
Match: AT1G22690.2 (Gibberellin-regulated family protein )

HSP 1 Score: 117.1 bits (292), Expect = 8.7e-27
Identity = 54/110 (49.09%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 4   LSVLCTFVLLLLFLQGLSEAFTN-------VNEGTNTTALNKKHIYSPKINCKYACSRRC 63
           ++++ +F+LL   L  LS +  N        N+   T A  + + + P+INC +AC+RRC
Sbjct: 10  VTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRC 69

Query: 64  MKVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 107
            K  RKK+C RACGSCC++C CVPPGT GN  +CPCYA +RTHGN+LKCP
Sbjct: 70  SKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Cp4.1LG13g11500 vs. TAIR 10
Match: AT1G22690.3 (Gibberellin-regulated family protein )

HSP 1 Score: 117.1 bits (292), Expect = 8.7e-27
Identity = 54/110 (49.09%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 4   LSVLCTFVLLLLFLQGLSEAFTN-------VNEGTNTTALNKKHIYSPKINCKYACSRRC 63
           ++++ +F+LL   L  LS +  N        N+   T A  + + + P+INC +AC+RRC
Sbjct: 10  VTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRC 69

Query: 64  MKVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 107
            K  RKK+C RACGSCC++C CVPPGT GN  +CPCYA +RTHGN+LKCP
Sbjct: 70  SKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Cp4.1LG13g11500 vs. TAIR 10
Match: AT1G75750.1 (GAST1 protein homolog 1 )

HSP 1 Score: 97.1 bits (240), Expect = 9.3e-21
Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 38  KKHIYSPKINCKYACSRRCMKVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLR 97
           KK+ Y+ KI+C  AC  RC   RR ++C RACG+CC RC+CVPPGTYGN+  C CYA L 
Sbjct: 30  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 89

Query: 98  THGNRLKCP 107
           THG R KCP
Sbjct: 90  THGGRRKCP 98

[Close]

BLAST of Cp4.1LG13g11500 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 97.1 bits (240), Expect = 9.3e-21
Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 38  KKHIYSPKINCKYACSRRCMKVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLR 97
           KK+ Y+ KI+C  AC  RC   RR ++C RACG+CC RC+CVPPGTYGN+  C CYA L 
Sbjct: 29  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 88

Query: 98  THGNRLKCP 107
           THG R KCP
Sbjct: 89  THGGRRKCP 97

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g11500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK5	1.2e-25	49.09	Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV...	[more]
P46689	1.3e-19	60.87	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]
Q93X17	8.5e-19	46.39	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
P46688	1.5e-18	64.52	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]
P46687	1.6e-17	61.29	Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV...	[more]

BLAST of Cp4.1LG13g11500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550961.1	1.27e-74	100.00	gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938854.1	2.22e-73	98.11	gibberellin-regulated protein 9 [Cucurbita moschata] >KAG6578328.1 Gibberellin-r...	[more]
XP_022993114.1	2.03e-71	96.23	gibberellin-regulated protein 9-like [Cucurbita maxima]	[more]
XP_038885058.1	1.63e-57	78.30	gibberellin-regulated protein 9-like [Benincasa hispida]	[more]
XP_008441216.1	3.85e-56	77.36	PREDICTED: gibberellin-regulated protein 9 [Cucumis melo]	[more]

BLAST of Cp4.1LG13g11500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFC2	1.07e-73	98.11	gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE...	[more]
A0A6J1JZB3	9.82e-72	96.23	gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231...	[more]
A0A0A0LMS4	1.86e-56	77.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1	[more]
A0A1S3B2G6	1.86e-56	77.36	gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=...	[more]
A0A6J1DG94	5.41e-52	72.48	gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 P...	[more]

BLAST of Cp4.1LG13g11500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22690.1	8.7e-27	49.09	Gibberellin-regulated family protein	[more]
AT1G22690.2	8.7e-27	49.09	Gibberellin-regulated family protein	[more]
AT1G22690.3	8.7e-27	49.09	Gibberellin-regulated family protein	[more]
AT1G75750.1	9.3e-21	60.87	GAST1 protein homolog 1	[more]
AT1G75750.2	9.3e-21	60.87	GAST1 protein homolog 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 47..106 e-value: 8.0E-21 score: 73.9
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 17..106
None	No IPR available	PANTHER	PTHR23201:SF20	GIBBERELLIN-REGULATED PROTEIN 9	coord: 17..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g11500.1	Cp4.1LG13g11500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane