Cp4.1LG13g11290 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g11290
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ribulose-phosphate 3-epimerase
Location	Cp4.1LG13: 8976694 .. 8979720 (-)
RNA-Seq Expression	Cp4.1LG13g11290
Synteny	Cp4.1LG13g11290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTTTTTTTTTTTTTTTTTTCCAAAATCATAATCTGTGTAAAATTTCCTTGCCCCCATTTACGGAAAAAAATGGCGTCAAAGTTTAGGAAAGTGGAGTTGTGGATTGACGAGAAGAAGCCAAGAATGTTGTGAAGACGCGATAATTTACGAAAAAAATGTAGAAAAGGAGGGATGCCACTTTCAGACGGTCCAAAAAGAGCCCACGAAGGACGATCTTCTTATTTATCAGTCGAGCCGCCAGGGGTTGGTAAGATAATCTATAAAAACGAAAAAGCATCGGAGTTGGGAGTTGGGGTTTCTTTGTCTTAGAATTTTCGAGAATTAAATCTGTATCTGCAAATTCCTCGCTGTTGAATTACTCGAGTTTTTGATCGGCTAAGCGAGTAAGAGGCAGACGAAAATGGGAGTAGCTGCGAAAATCGCACCGTCAATGCTATCCTCAGATTTTGCCAATTTAGCTTCGGAGGCCGAAAGAATGCTTAGATTTGGAGCGGATTGGCTTCACATGGATATTATGGTACCCACACGCTCTCTATTTCTGTTTTCCTGAATCGCCATTTCTCTCCAGTTATAATTGGACGAAGTACCTTTTGATTCTTGCTCCCATTTGGTTCTGTTTCATAACCCAATAATTTGATCCTAGTTTTTGCCTTCTTACTCTAATTTCCCACCGGTTAGTTCTCGTGTAGTTTAATTTGTTCATAATCTACTTGACTAATTGTTTGAATCGTCTAATTTGTCTGTGCTTTTCTGGGTCTTAATAAAATTTTATCTACCCTAATTTAGTACTTCTGTAGTAATAGTGTAAGGTAGTCCATGGAGGACGAGCAGACTTTTACCTTCACCAATGATTTCTCTCTGCTGCTAATTGTTATAGTCCTGTTTAAAGAATGGATTTTACTTTCTTGTAAATGGGCTGATGACAGTGTAGAGAAAGGCGCTTGGAGATGCATAATTCAATTAGTGATCTTATAATGACATGCTTGCAAGGTTTGAGATAAATTTATCTGCCATCACATCTGATATCTGTTGTTGCTTTATTTGCAGGATGGGTAGGCTCATTCTTTGCTGATATCATACTCCTGTTGAACTGCAATGTGCTTCATGTGAATGGGTTTTAAATTTCCTCTAAATAACTTGACCTCGACCTGTGTGGTGTTTTGATCGCTTGTAGTATCTACTTTCCAGCCAGATGCCTGCTTATTTATAAATATTTGCTGAAGAAACTTGAGAAATATCTAGTTTTATTTATTGATTTTATTATTTCTAAAGTAAAAAAAAATGTGAGATCTCGTATCGGTTAGAGAGAAGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGACGCGTTTTAAAACCTTGAGTGTAGCTTAGGGAAAGCTGGTCTACCTTCAGAACATTCTTTCTGCTACCATCCTTTTTAATAGGAAATAAATCTGGGGCTGCAAACTAAAAAAGTGTTGGCCCCTACCCAGAATGAACTATTATCAAGAAAATCACAAAGATTTTTCTTTTAAATGCATCGACATGGTGGCCCCGTGAAAATCTATCCATTATCATTTGGTTGAGTTCATTCTGTAACAGGATTGTGGATCATTTCTCGGTGATGTGATTTGTGCATCATCTGGATTAACACAAGTTGGGCTTGCTTTTCTAGCAAAGTAATAGTTTTTTTGTTTATGCATTTACCGCAGGCACTTCGTCCCGAATCTGACAATTGGTGCTCCAGTCATCGAGAGTTTAAGAAAACATACGAAGTAATCTAACCTCTTTGCTTCTTCAGTTTGAGGAATTTGGATTTTTTTGATGACATTACCTGAGTTTATGAGGAATTAATTTCTTGTCTTGCAGGGCATATCTTGATTGCCACCTTATGGTTACAAATCCACTTGATTACGTTGAACCCTTCGCAAAAGCTGGTGCTTCAGGCTTTACATTTCATGTTGAAGTATCCAAAGGTATATTGTGTTTGAACTTCAGATTTGTTCTACTTCTATGGCATCAAAATTGTTTTAACTTTTCTTTCCCTCTTCTCTGGTAGACAATTGGCAGCAATTAATCCAAGAAATCAAGTCAAAGGGCATGAAGTCAGGGGTTGCGCTAAAACCCGGAACACCCATTGAAGAAGTTTATCCTTTGGTATGCAATTCATCTTTACATCTTCTCCCCCAATCTCATATCCTTCATTTACAAGGATGTTATAGTTCATTGATATATAGCGCTGCAAAGTGCTTATGGTTTTGTGCAAATGCTGCTTCATCAAATTTTTTATAATTGGTAAGTTATGCTTGTTCTTTTTTTCAATTTTCAGGTAGAAAGTGAAAATCCTGTGGAAATGGTCCTTGTTATGACAGTCGAACCTGGTTTTGGTGGCCAAAAGTTCATGCCCGAAACGATGGATAAGGTTCCATTACTTCGACGTTTTTCAATATTCCTTGAGGATTGTTTGATTGGCGTTTCTTGTTGAATCTCATTACTGATTTTAACTTATCCAGGTACGGAAGTTAAGACAGAAGTACCCATCTCTTGACATTGAGGTAAACGCTACGTAGCGTGTACTCGTTGCAGTTCAAATTCAGCGTACAGATGGCTGTATGAGGGATGGTTTCTGACTGGTCATTTTTGCTTTGGTGGGCAGGTGGATGGCGGGTTGGGACCTTCGACCATAGATGCAGCAGCTTCAGCTGGGGCAAACTGCATCGTTGCAGGAAGTTCGGTGTTTGGAGCTCCCGAGCCTTCCGAAGTTATATTCATTCTGAGGAAAAGTGTTGAGGAGGCTCAACAGAACTCTTGATCCTTGAACAAGCTTCAAGAATCCGCCATCAAATCTTGTTTTACACTTTTTGCAATTCATACGGGATATTTTTAGATTGATAGAAGTTGATTTGAGTCAAGTGGTGTCAGTATAATCTGAACTAACATATGGTTTGTGAGCCCCCAATACTGAGTATCATGATTCCTTTCTGGTTTTTGATTATGCTGAAATGGATTGGCTTCATGGTGGTTTGGCAATGAA

mRNA sequence

TTTGTTTTTTTTTTTTTTTTTTCCAAAATCATAATCTGTGTAAAATTTCCTTGCCCCCATTTACGGAAAAAAATGGCGTCAAAGTTTAGGAAAGTGGAGTTGTGGATTGACGAGAAGAAGCCAAGAATGTTGTGAAGACGCGATAATTTACGAAAAAAATGTAGAAAAGGAGGGATGCCACTTTCAGACGGTCCAAAAAGAGCCCACGAAGGACGATCTTCTTATTTATCAGTCGAGCCGCCAGGGGTTGGTAAGATAATCTATAAAAACGAAAAAGCATCGGAGTTGGGAGTTGGGGTTTCTTTGTCTTAGAATTTTCGAGAATTAAATCTGTATCTGCAAATTCCTCGCTGTTGAATTACTCGAGTTTTTGATCGGCTAAGCGAGTAAGAGGCAGACGAAAATGGGAGTAGCTGCGAAAATCGCACCGTCAATGCTATCCTCAGATTTTGCCAATTTAGCTTCGGAGGCCGAAAGAATGCTTAGATTTGGAGCGGATTGGCTTCACATGGATATTATGTGTAGAGAAAGGCGCTTGGAGATGCATAATTCAATTAGTGATCTTATAATGACATGCTTGCAAGGATGGGTAGGCTCATTCTTTGCTGATATCATACTCCTGTTGAACTGCAATGTGCTTCATGTGAATGGGCACTTCGTCCCGAATCTGACAATTGGTGCTCCAGTCATCGAGAGTTTAAGAAAACATACGAAGGCATATCTTGATTGCCACCTTATGGTTACAAATCCACTTGATTACGTTGAACCCTTCGCAAAAGCTGGTGCTTCAGGCTTTACATTTCATGTTGAAGTATCCAAAGACAATTGGCAGCAATTAATCCAAGAAATCAAGTCAAAGGGCATGAAGTCAGGGGTTGCGCTAAAACCCGGAACACCCATTGAAGAAGTTTATCCTTTGGTAGAAAGTGAAAATCCTGTGGAAATGGTCCTTGTTATGACAGTCGAACCTGGTTTTGGTGGCCAAAAGTTCATGCCCGAAACGATGGATAAGGTACGGAAGTTAAGACAGAAGTACCCATCTCTTGACATTGAGGTGGATGGCGGGTTGGGACCTTCGACCATAGATGCAGCAGCTTCAGCTGGGGCAAACTGCATCGTTGCAGGAAGTTCGGTGTTTGGAGCTCCCGAGCCTTCCGAAGTTATATTCATTCTGAGGAAAAGTGTTGAGGAGGCTCAACAGAACTCTTGATCCTTGAACAAGCTTCAAGAATCCGCCATCAAATCTTGTTTTACACTTTTTGCAATTCATACGGGATATTTTTAGATTGATAGAAGTTGATTTGAGGGTTTGTGAGCCCCCAATACTGAGTATCATGATTCCTTTCTGGTTTTTGATTATGCTGAAATGGATTGGCTTCATGGTGGTTTGGCAATGAA

Coding sequence (CDS)

ATGGGAGTAGCTGCGAAAATCGCACCGTCAATGCTATCCTCAGATTTTGCCAATTTAGCTTCGGAGGCCGAAAGAATGCTTAGATTTGGAGCGGATTGGCTTCACATGGATATTATGTGTAGAGAAAGGCGCTTGGAGATGCATAATTCAATTAGTGATCTTATAATGACATGCTTGCAAGGATGGGTAGGCTCATTCTTTGCTGATATCATACTCCTGTTGAACTGCAATGTGCTTCATGTGAATGGGCACTTCGTCCCGAATCTGACAATTGGTGCTCCAGTCATCGAGAGTTTAAGAAAACATACGAAGGCATATCTTGATTGCCACCTTATGGTTACAAATCCACTTGATTACGTTGAACCCTTCGCAAAAGCTGGTGCTTCAGGCTTTACATTTCATGTTGAAGTATCCAAAGACAATTGGCAGCAATTAATCCAAGAAATCAAGTCAAAGGGCATGAAGTCAGGGGTTGCGCTAAAACCCGGAACACCCATTGAAGAAGTTTATCCTTTGGTAGAAAGTGAAAATCCTGTGGAAATGGTCCTTGTTATGACAGTCGAACCTGGTTTTGGTGGCCAAAAGTTCATGCCCGAAACGATGGATAAGGTACGGAAGTTAAGACAGAAGTACCCATCTCTTGACATTGAGGTGGATGGCGGGTTGGGACCTTCGACCATAGATGCAGCAGCTTCAGCTGGGGCAAACTGCATCGTTGCAGGAAGTTCGGTGTTTGGAGCTCCCGAGCCTTCCGAAGTTATATTCATTCTGAGGAAAAGTGTTGAGGAGGCTCAACAGAACTCTTGA

Protein sequence

MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQGWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSEVIFILRKSVEEAQQNS

Homology

[Close]

BLAST of Cp4.1LG13g11290 vs. ExPASy Swiss-Prot
Match: Q9SE42 (Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0505700 PE=1 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.5e-101
Identity = 188/265 (70.94%), Postives = 208/265 (78.49%), Query Frame = 0


Query: 4   AAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQGWV 63
           AAKIAPSMLSSDFANLA+EA+RM+R GADWLHMDIM                        
Sbjct: 6   AAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIM------------------------ 65

Query: 64  GSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPF 123
                             +GHFVPNLTIGAPVI+SLRKHTKAYLDCHLMVTNP DYVEP 
Sbjct: 66  ------------------DGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPL 125

Query: 124 AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVEMVL 183
           AKAGASGFTFH+EVS+DNWQ+LIQ IK+KGM+ GV+L+PGTP+EEV+PLVE+ENPVE+VL
Sbjct: 126 AKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVL 185

Query: 184 VMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVAGSS 243
           VMTVEPGFGGQKFMPE M+KVR LR+KYPSLDIEVDGGLGPSTID AASAGANCIVAGSS
Sbjct: 186 VMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSS 228

Query: 244 VFGAPEPSEVIFILRKSVEEAQQNS 269
           +FGA EP EVI  LRKSVE +Q  S
Sbjct: 246 IFGAAEPGEVISALRKSVEGSQNKS 228

[Close]

BLAST of Cp4.1LG13g11290 vs. ExPASy Swiss-Prot
Match: O14105 (Ribulose-phosphate 3-epimerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC31G5.05c PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.6e-56
Identity = 125/267 (46.82%), Postives = 161/267 (60.30%), Query Frame = 0


Query: 3   VAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQGW 62
           V AKIAPS+L+ DFANL  E  RML++G+DWLH+D+M                       
Sbjct: 2   VQAKIAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVM----------------------- 61

Query: 63  VGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKH---TKAYLDCHLMVTNPLDY 122
                              +  FVPNLTIG  V++++R H    +A+ DCHLMV  P  Y
Sbjct: 62  -------------------DAQFVPNLTIGPIVVKAMRNHYTKEEAFFDCHLMVIEPERY 121

Query: 123 VEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPV 182
           ++  A AGAS F FH E ++ + +++I     KGM  G ALKP TP+E + P VE    +
Sbjct: 122 IDQLADAGASLFCFHYEATEKH-EEIISRAHEKGMLVGCALKPKTPVEVILPFVEK---L 181

Query: 183 EMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIV 242
           +MVLVMTVEPG GGQ FMPE + KV  LR+KYP+L++EVDGGL   T+DAAA AGAN IV
Sbjct: 182 DMVLVMTVEPGKGGQSFMPECLPKVEFLRKKYPTLNVEVDGGLSLKTVDAAADAGANVIV 222

Query: 243 AGSSVFGAPEPSEVIFILRKSVEEAQQ 267
           AG++VF A  P EVI  LR SV +AQ+
Sbjct: 242 AGTAVFHAQSPEEVISGLRNSVMKAQE 222

[Close]

BLAST of Cp4.1LG13g11290 vs. ExPASy Swiss-Prot
Match: Q96AT9 (Ribulose-phosphate 3-epimerase OS=Homo sapiens OX=9606 GN=RPE PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.1e-53
Identity = 119/268 (44.40%), Postives = 158/268 (58.96%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           M    KI PS+L+SD ANL +E  RML  GAD+LH+D+M                     
Sbjct: 1   MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVM--------------------- 60

Query: 61  GWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKH--TKAYLDCHLMVTNPLD 120
                                +GHFVPN+T G PV+ESLRK      + D H+MV+ P  
Sbjct: 61  ---------------------DGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQ 120

Query: 121 YVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENP 180
           +V+P A AGA+ +TFH+E + +N   LI++I+  GMK G+A+KPGT +E + P     N 
Sbjct: 121 WVKPMAVAGANQYTFHLEAT-ENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWA---NQ 180

Query: 181 VEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCI 240
           ++M LVMTVEPGFGGQKFM + M KV  LR ++PSLDIEVDGG+GP T+   A AGAN I
Sbjct: 181 IDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMI 222

Query: 241 VAGSSVFGAPEPSEVIFILRKSVEEAQQ 267
           V+GS++  + +P  VI +LR    EA Q
Sbjct: 241 VSGSAIMRSEDPRSVINLLRNVCSEAAQ 222

[Close]

BLAST of Cp4.1LG13g11290 vs. ExPASy Swiss-Prot
Match: Q6FL81 (Ribulose-phosphate 3-epimerase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=RPE1 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.7e-53
Identity = 117/273 (42.86%), Postives = 156/273 (57.14%), Query Frame = 0


Query: 7   IAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQGWVGSF 66
           IAPS+L+SDFANL  E  R++  GA+WLH+D+M                           
Sbjct: 6   IAPSILASDFANLGCECHRVINSGAEWLHIDVM--------------------------- 65

Query: 67  FADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRK----------------HTKAYLDCH 126
                          +GHFVPN+T+G P++ SLR+                   A+ DCH
Sbjct: 66  ---------------DGHFVPNITLGQPIVTSLRRAVPRSQEEEKASGEVARPTAFFDCH 125

Query: 127 LMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVY 186
           +MV  P  +V  FAKAGA  FTFH E +KD    L++ IK  G+K+  A+KPGTP++ ++
Sbjct: 126 MMVEEPEKWVADFAKAGADQFTFHYEATKDP-LSLVKLIKENGIKAACAIKPGTPVDVLF 185

Query: 187 PLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAA 246
            L      ++M LVMTVEPGFGGQKFMP+ M KV  LR K+P ++I+VDGGLG  TI  A
Sbjct: 186 ELAPY---LDMALVMTVEPGFGGQKFMPDMMPKVEALRTKFPHMNIQVDGGLGKETIGVA 232

Query: 247 ASAGANCIVAGSSVFGAPEPSEVIFILRKSVEE 264
           A AGAN IVAG+SVF A +P EVI  +++ V +
Sbjct: 246 AKAGANVIVAGTSVFTASDPHEVISFMKEEVRK 232

[Close]

BLAST of Cp4.1LG13g11290 vs. ExPASy Swiss-Prot
Match: P46969 (Ribulose-phosphate 3-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPE1 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.5e-53
Identity = 117/270 (43.33%), Postives = 157/270 (58.15%), Query Frame = 0


Query: 7   IAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQGWVGSF 66
           IAPS+L+SDFANL  E  +++  GADWLH+D+M                           
Sbjct: 6   IAPSILASDFANLGCECHKVINAGADWLHIDVM--------------------------- 65

Query: 67  FADIILLLNCNVLHVNGHFVPNLTIGAPVIESLR-------------KHTKAYLDCHLMV 126
                          +GHFVPN+T+G P++ SLR             K   A+ DCH+MV
Sbjct: 66  ---------------DGHFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDCHMMV 125

Query: 127 TNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLV 186
            NP  +V+ FAK GA  FTFH E ++D    L++ IKSKG+K+  A+KPGT ++ ++ L 
Sbjct: 126 ENPEKWVDDFAKCGADQFTFHYEATQDP-LHLVKLIKSKGIKAACAIKPGTSVDVLFELA 185

Query: 187 ESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASA 246
                ++M LVMTVEPGFGGQKFM + M KV  LR K+P L+I+VDGGLG  TI  AA A
Sbjct: 186 PH---LDMALVMTVEPGFGGQKFMEDMMPKVETLRAKFPHLNIQVDGGLGKETIPKAAKA 229

Query: 247 GANCIVAGSSVFGAPEPSEVIFILRKSVEE 264
           GAN IVAG+SVF A +P +VI  +++ V +
Sbjct: 246 GANVIVAGTSVFTAADPHDVISFMKEEVSK 229

[Close]

BLAST of Cp4.1LG13g11290 vs. NCBI nr
Match: XP_023551616.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424 bits (1091), Expect = 1.26e-148
Identity = 225/268 (83.96%), Postives = 226/268 (84.33%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIM                     
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIM--------------------- 60

Query: 61  GWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120
                                +GHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV
Sbjct: 61  ---------------------DGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120

Query: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180
           EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE
Sbjct: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180

Query: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 240
           MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA
Sbjct: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 226

Query: 241 GSSVFGAPEPSEVIFILRKSVEEAQQNS 268
           GSSVFGAPEPSEVIFILRKSVEEAQQNS
Sbjct: 241 GSSVFGAPEPSEVIFILRKSVEEAQQNS 226

[Close]

BLAST of Cp4.1LG13g11290 vs. NCBI nr
Match: XP_022992624.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita maxima] >KAG6578373.1 Ribulose-phosphate 3-epimerase, cytoplasmic isoform, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 420 bits (1080), Expect = 5.98e-147
Identity = 223/268 (83.21%), Postives = 225/268 (83.96%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           MGVAAKIAPSMLSSDFANLASEAERML+FGADWLHMDIM                     
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM--------------------- 60

Query: 61  GWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120
                                +GHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV
Sbjct: 61  ---------------------DGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120

Query: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180
           EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE
Sbjct: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180

Query: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 240
           MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA
Sbjct: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 226

Query: 241 GSSVFGAPEPSEVIFILRKSVEEAQQNS 268
           GSSVFGAPEPSEVI ILRKSVEEAQQNS
Sbjct: 241 GSSVFGAPEPSEVISILRKSVEEAQQNS 226

[Close]

BLAST of Cp4.1LG13g11290 vs. NCBI nr
Match: XP_022939918.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita moschata])

HSP 1 Score: 418 bits (1074), Expect = 4.91e-146
Identity = 222/268 (82.84%), Postives = 224/268 (83.58%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           MGVAAKIAPSMLSSDFANLASEAERML+FGADWLHMDIM                     
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM--------------------- 60

Query: 61  GWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120
                                +GHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV
Sbjct: 61  ---------------------DGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120

Query: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180
           EP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE
Sbjct: 121 EPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180

Query: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 240
           MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA
Sbjct: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 226

Query: 241 GSSVFGAPEPSEVIFILRKSVEEAQQNS 268
           GSSVFGAPEPSEVI ILRKSVEEAQQNS
Sbjct: 241 GSSVFGAPEPSEVISILRKSVEEAQQNS 226

[Close]

BLAST of Cp4.1LG13g11290 vs. NCBI nr
Match: KAE8652263.1 (hypothetical protein Csa_022656 [Cucumis sativus])

HSP 1 Score: 411 bits (1057), Expect = 3.39e-143
Identity = 223/271 (82.29%), Postives = 228/271 (84.13%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           MGVAAKIAPSMLSSDFANLASEAERML+FGADWLHMDIM      +  NS+      CL 
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM------KAPNSV------CLD 60

Query: 61  GWVGSFFADIILLLNCNVLHVNG---HFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPL 120
                            VLH      HFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPL
Sbjct: 61  -----------------VLHAYPWVRHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPL 120

Query: 121 DYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESEN 180
           DYVEP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESEN
Sbjct: 121 DYVEPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESEN 180

Query: 181 PVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANC 240
           PV++VLVMTVEPGFGGQKFMPETMDKVR LRQKYPSLDIEVDGGLGPSTIDAAASAGANC
Sbjct: 181 PVDLVLVMTVEPGFGGQKFMPETMDKVRNLRQKYPSLDIEVDGGLGPSTIDAAASAGANC 240

Query: 241 IVAGSSVFGAPEPSEVIFILRKSVEEAQQNS 268
           IVAGSSVFGAPEPSEVI ILR SVEEAQQ S
Sbjct: 241 IVAGSSVFGAPEPSEVISILRNSVEEAQQKS 242

[Close]

BLAST of Cp4.1LG13g11290 vs. NCBI nr
Match: XP_008441351.1 (PREDICTED: ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucumis melo] >XP_008441352.1 PREDICTED: ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucumis melo])

HSP 1 Score: 410 bits (1055), Expect = 3.85e-143
Identity = 217/268 (80.97%), Postives = 221/268 (82.46%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           MGVAAKIAPSMLSSDFANLASEAERML+FGADWLHMDIM                     
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM--------------------- 60

Query: 61  GWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120
                                +GHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV
Sbjct: 61  ---------------------DGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120

Query: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180
           EP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTP+EEVYPLVESENPVE
Sbjct: 121 EPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPVEEVYPLVESENPVE 180

Query: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 240
           +VLVMTVEPGFGGQKFMPETMDKVR LRQKYPSLDIEVDGGLGPSTIDAA SAGANCIVA
Sbjct: 181 LVLVMTVEPGFGGQKFMPETMDKVRNLRQKYPSLDIEVDGGLGPSTIDAATSAGANCIVA 226

Query: 241 GSSVFGAPEPSEVIFILRKSVEEAQQNS 268
           GSSVFGAPEPSEVI ILRKSVEEAQQ S
Sbjct: 241 GSSVFGAPEPSEVISILRKSVEEAQQKS 226

[Close]

BLAST of Cp4.1LG13g11290 vs. ExPASy TrEMBL
Match: A0A6J1JY19 (Ribulose-phosphate 3-epimerase OS=Cucurbita maxima OX=3661 GN=LOC111488913 PE=3 SV=1)

HSP 1 Score: 420 bits (1080), Expect = 2.90e-147
Identity = 223/268 (83.21%), Postives = 225/268 (83.96%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           MGVAAKIAPSMLSSDFANLASEAERML+FGADWLHMDIM                     
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM--------------------- 60

Query: 61  GWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120
                                +GHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV
Sbjct: 61  ---------------------DGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120

Query: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180
           EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE
Sbjct: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180

Query: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 240
           MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA
Sbjct: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 226

Query: 241 GSSVFGAPEPSEVIFILRKSVEEAQQNS 268
           GSSVFGAPEPSEVI ILRKSVEEAQQNS
Sbjct: 241 GSSVFGAPEPSEVISILRKSVEEAQQNS 226

[Close]

BLAST of Cp4.1LG13g11290 vs. ExPASy TrEMBL
Match: A0A6J1FMW0 (Ribulose-phosphate 3-epimerase OS=Cucurbita moschata OX=3662 GN=LOC111445640 PE=3 SV=1)

HSP 1 Score: 418 bits (1074), Expect = 2.38e-146
Identity = 222/268 (82.84%), Postives = 224/268 (83.58%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           MGVAAKIAPSMLSSDFANLASEAERML+FGADWLHMDIM                     
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM--------------------- 60

Query: 61  GWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120
                                +GHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV
Sbjct: 61  ---------------------DGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120

Query: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180
           EP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE
Sbjct: 121 EPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180

Query: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 240
           MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA
Sbjct: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 226

Query: 241 GSSVFGAPEPSEVIFILRKSVEEAQQNS 268
           GSSVFGAPEPSEVI ILRKSVEEAQQNS
Sbjct: 241 GSSVFGAPEPSEVISILRKSVEEAQQNS 226

[Close]

BLAST of Cp4.1LG13g11290 vs. ExPASy TrEMBL
Match: A0A1S3B391 (Ribulose-phosphate 3-epimerase OS=Cucumis melo OX=3656 GN=LOC103485491 PE=3 SV=1)

HSP 1 Score: 410 bits (1055), Expect = 1.87e-143
Identity = 217/268 (80.97%), Postives = 221/268 (82.46%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           MGVAAKIAPSMLSSDFANLASEAERML+FGADWLHMDIM                     
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM--------------------- 60

Query: 61  GWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120
                                +GHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV
Sbjct: 61  ---------------------DGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120

Query: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180
           EP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTP+EEVYPLVESENPVE
Sbjct: 121 EPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPVEEVYPLVESENPVE 180

Query: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 240
           +VLVMTVEPGFGGQKFMPETMDKVR LRQKYPSLDIEVDGGLGPSTIDAA SAGANCIVA
Sbjct: 181 LVLVMTVEPGFGGQKFMPETMDKVRNLRQKYPSLDIEVDGGLGPSTIDAATSAGANCIVA 226

Query: 241 GSSVFGAPEPSEVIFILRKSVEEAQQNS 268
           GSSVFGAPEPSEVI ILRKSVEEAQQ S
Sbjct: 241 GSSVFGAPEPSEVISILRKSVEEAQQKS 226

[Close]

BLAST of Cp4.1LG13g11290 vs. ExPASy TrEMBL
Match: A0A0A0LMZ3 (Ribulose-phosphate 3-epimerase OS=Cucumis sativus OX=3659 GN=Csa_2G406760 PE=3 SV=1)

HSP 1 Score: 409 bits (1052), Expect = 5.34e-143
Identity = 217/268 (80.97%), Postives = 221/268 (82.46%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           MGVAAKIAPSMLSSDFANLASEAERML+FGADWLHMDIM                     
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM--------------------- 60

Query: 61  GWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120
                                +GHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV
Sbjct: 61  ---------------------DGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120

Query: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180
           EP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPV+
Sbjct: 121 EPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVD 180

Query: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 240
           +VLVMTVEPGFGGQKFMPETMDKVR LRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA
Sbjct: 181 LVLVMTVEPGFGGQKFMPETMDKVRNLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 226

Query: 241 GSSVFGAPEPSEVIFILRKSVEEAQQNS 268
           GSSVFGAPEPSEVI ILR SVEEAQQ S
Sbjct: 241 GSSVFGAPEPSEVISILRNSVEEAQQKS 226

[Close]

BLAST of Cp4.1LG13g11290 vs. ExPASy TrEMBL
Match: A0A6J1JKW6 (Ribulose-phosphate 3-epimerase OS=Cucurbita maxima OX=3661 GN=LOC111487815 PE=3 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 1.53e-142
Identity = 217/268 (80.97%), Postives = 221/268 (82.46%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           MGVAAKIAPSMLSSDFANLASEAERML+FGADWLHMDIM                     
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIM--------------------- 60

Query: 61  GWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120
                                +GHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV
Sbjct: 61  ---------------------DGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120

Query: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180
           EP AKAGASG TFHVEVSKDNWQQLIQEIKSKGMK+GVALKPGTPIEEVY LVESENPVE
Sbjct: 121 EPLAKAGASGLTFHVEVSKDNWQQLIQEIKSKGMKAGVALKPGTPIEEVYALVESENPVE 180

Query: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 240
           MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA
Sbjct: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 226

Query: 241 GSSVFGAPEPSEVIFILRKSVEEAQQNS 268
           GSSVFGAPEPSEVI +LRKSVEEAQ NS
Sbjct: 241 GSSVFGAPEPSEVISVLRKSVEEAQLNS 226

[Close]

BLAST of Cp4.1LG13g11290 vs. TAIR 10
Match: AT3G01850.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 355.1 bits (910), Expect = 4.8e-98
Identity = 181/263 (68.82%), Postives = 202/263 (76.81%), Query Frame = 0


Query: 3   VAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQGW 62
           V+ KIAPSMLSSDFANLA+EA RM+  GA+WLHMDIM                       
Sbjct: 2   VSPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIM----------------------- 61

Query: 63  VGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEP 122
                              +GHFVPNLTIGAPVIESLRKHT AYLDCHLMVTNP+DYV  
Sbjct: 62  -------------------DGHFVPNLTIGAPVIESLRKHTNAYLDCHLMVTNPMDYVAQ 121

Query: 123 FAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVEMV 182
            AKAGASGFTFHVEV++DNWQQL+++IKS GM+ GVALKPGTP+E+VYPLVE   PVEMV
Sbjct: 122 MAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTPVEQVYPLVEGTTPVEMV 181

Query: 183 LVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVAGS 242
           LVMTVEPGFGGQKFMP+ MDKVR LRQKYP+LDI+VDGGLGPSTID AA+AGANCIVAGS
Sbjct: 182 LVMTVEPGFGGQKFMPDMMDKVRALRQKYPTLDIQVDGGLGPSTIDTAAAAGANCIVAGS 222

Query: 243 SVFGAPEPSEVIFILRKSVEEAQ 266
           SVFGAPEP +VI +LR SVE+AQ
Sbjct: 242 SVFGAPEPGDVISLLRTSVEKAQ 222

[Close]

BLAST of Cp4.1LG13g11290 vs. TAIR 10
Match: AT3G01850.2 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 355.1 bits (910), Expect = 4.8e-98
Identity = 181/263 (68.82%), Postives = 202/263 (76.81%), Query Frame = 0


Query: 3   VAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQGW 62
           V+ KIAPSMLSSDFANLA+EA RM+  GA+WLHMDIM                       
Sbjct: 2   VSPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIM----------------------- 61

Query: 63  VGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEP 122
                              +GHFVPNLTIGAPVIESLRKHT AYLDCHLMVTNP+DYV  
Sbjct: 62  -------------------DGHFVPNLTIGAPVIESLRKHTNAYLDCHLMVTNPMDYVAQ 121

Query: 123 FAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVEMV 182
            AKAGASGFTFHVEV++DNWQQL+++IKS GM+ GVALKPGTP+E+VYPLVE   PVEMV
Sbjct: 122 MAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTPVEQVYPLVEGTTPVEMV 181

Query: 183 LVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVAGS 242
           LVMTVEPGFGGQKFMP+ MDKVR LRQKYP+LDI+VDGGLGPSTID AA+AGANCIVAGS
Sbjct: 182 LVMTVEPGFGGQKFMPDMMDKVRALRQKYPTLDIQVDGGLGPSTIDTAAAAGANCIVAGS 222

Query: 243 SVFGAPEPSEVIFILRKSVEEAQ 266
           SVFGAPEP +VI +LR SVE+AQ
Sbjct: 242 SVFGAPEPGDVISLLRTSVEKAQ 222

[Close]

BLAST of Cp4.1LG13g11290 vs. TAIR 10
Match: AT1G63290.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 353.2 bits (905), Expect = 1.8e-97
Identity = 179/268 (66.79%), Postives = 207/268 (77.24%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQ 60
           +GV+ KIAPSMLSSDFANLA+EA+RM+  GA+WLHMDIM                     
Sbjct: 2   VGVSPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIM--------------------- 61

Query: 61  GWVGSFFADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYV 120
                                +GHFV NLTIGAPVIESLRKHT AYLDCHLMVTNP+DYV
Sbjct: 62  ---------------------DGHFVSNLTIGAPVIESLRKHTNAYLDCHLMVTNPMDYV 121

Query: 121 EPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVE 180
           +  AKAGASGFTFHVEV+++NWQ+L+++IK+ GM+ GVALKPGTP+E+VYPLVE  NPVE
Sbjct: 122 DQMAKAGASGFTFHVEVAQENWQELVKKIKAAGMRPGVALKPGTPVEQVYPLVEGTNPVE 181

Query: 181 MVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVA 240
           MVLVMTVEPGFGGQKFMP  MDKVR LR KYP+LDIEVDGGLGPSTIDAAA+AGANCIVA
Sbjct: 182 MVLVMTVEPGFGGQKFMPSMMDKVRALRNKYPTLDIEVDGGLGPSTIDAAAAAGANCIVA 227

Query: 241 GSSVFGAPEPSEVIFILRKSVEEAQQNS 269
           GSSVFGAP+P +VI +LR SVE+AQ ++
Sbjct: 242 GSSVFGAPKPGDVISLLRASVEKAQPST 227

[Close]

BLAST of Cp4.1LG13g11290 vs. TAIR 10
Match: AT5G61410.1 (D-ribulose-5-phosphate-3-epimerase )

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-34
Identity = 91/263 (34.60%), Postives = 136/263 (51.71%), Query Frame = 0


Query: 7   IAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQGWVGSF 66
           ++PS+LS++FA L  + + +   G DW+H+D+M                           
Sbjct: 60  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVM--------------------------- 119

Query: 67  FADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPFAKA 126
                          +G FVPN+TIG  V+++LR  T   LD HLM+  P   V  F KA
Sbjct: 120 ---------------DGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 179

Query: 127 GASGFTFHVE-VSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVEMVLVM 186
           GA   + H E  S  +  + + +IKS G K+GV L PGTP+  +  +++    V++VL+M
Sbjct: 180 GADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLSAIEYVLDM---VDLVLIM 239

Query: 187 TVEPGFGGQKFMPETMDKVRKLR----QKYPSLDIEVDGGLGPSTIDAAASAGANCIVAG 246
           +V PGFGGQ F+   + K+  LR    +K  +  IEVDGG+ P+       AGAN +VAG
Sbjct: 240 SVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPANAYKVIEAGANALVAG 277

Query: 247 SSVFGAPEPSEVIFILRKSVEEA 265
           S+VFGA + +E I  ++ S   A
Sbjct: 300 SAVFGAKDYAEAIKGIKASKRPA 277

[Close]

BLAST of Cp4.1LG13g11290 vs. TAIR 10
Match: AT5G61410.2 (D-ribulose-5-phosphate-3-epimerase )

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-34
Identity = 91/263 (34.60%), Postives = 136/263 (51.71%), Query Frame = 0


Query: 7   IAPSMLSSDFANLASEAERMLRFGADWLHMDIMCRERRLEMHNSISDLIMTCLQGWVGSF 66
           ++PS+LS++FA L  + + +   G DW+H+D+M                           
Sbjct: 60  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVM--------------------------- 119

Query: 67  FADIILLLNCNVLHVNGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPFAKA 126
                          +G FVPN+TIG  V+++LR  T   LD HLM+  P   V  F KA
Sbjct: 120 ---------------DGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKA 179

Query: 127 GASGFTFHVE-VSKDNWQQLIQEIKSKGMKSGVALKPGTPIEEVYPLVESENPVEMVLVM 186
           GA   + H E  S  +  + + +IKS G K+GV L PGTP+  +  +++    V++VL+M
Sbjct: 180 GADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLSAIEYVLDM---VDLVLIM 239

Query: 187 TVEPGFGGQKFMPETMDKVRKLR----QKYPSLDIEVDGGLGPSTIDAAASAGANCIVAG 246
           +V PGFGGQ F+   + K+  LR    +K  +  IEVDGG+ P+       AGAN +VAG
Sbjct: 240 SVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPANAYKVIEAGANALVAG 277

Query: 247 SSVFGAPEPSEVIFILRKSVEEA 265
           S+VFGA + +E I  ++ S   A
Sbjct: 300 SAVFGAKDYAEAIKGIKASKRPA 277

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g11290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SE42	3.5e-101	70.94	Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japon...	[more]
O14105	2.6e-56	46.82	Ribulose-phosphate 3-epimerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]
Q96AT9	2.1e-53	44.40	Ribulose-phosphate 3-epimerase OS=Homo sapiens OX=9606 GN=RPE PE=1 SV=1	[more]
Q6FL81	2.7e-53	42.86	Ribulose-phosphate 3-epimerase OS=Candida glabrata (strain ATCC 2001 / CBS 138 /...	[more]
P46969	3.5e-53	43.33	Ribulose-phosphate 3-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 /...	[more]

BLAST of Cp4.1LG13g11290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551616.1	1.26e-148	83.96	ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [Cucurbita pepo subsp. ...	[more]
XP_022992624.1	5.98e-147	83.21	ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita maxima] >KAG65783...	[more]
XP_022939918.1	4.91e-146	82.84	ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita moschata]	[more]
KAE8652263.1	3.39e-143	82.29	hypothetical protein Csa_022656 [Cucumis sativus]	[more]
XP_008441351.1	3.85e-143	80.97	PREDICTED: ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucumis melo] >X...	[more]

BLAST of Cp4.1LG13g11290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JY19	2.90e-147	83.21	Ribulose-phosphate 3-epimerase OS=Cucurbita maxima OX=3661 GN=LOC111488913 PE=3 ...	[more]
A0A6J1FMW0	2.38e-146	82.84	Ribulose-phosphate 3-epimerase OS=Cucurbita moschata OX=3662 GN=LOC111445640 PE=...	[more]
A0A1S3B391	1.87e-143	80.97	Ribulose-phosphate 3-epimerase OS=Cucumis melo OX=3656 GN=LOC103485491 PE=3 SV=1	[more]
A0A0A0LMZ3	5.34e-143	80.97	Ribulose-phosphate 3-epimerase OS=Cucumis sativus OX=3659 GN=Csa_2G406760 PE=3 S...	[more]
A0A6J1JKW6	1.53e-142	80.97	Ribulose-phosphate 3-epimerase OS=Cucurbita maxima OX=3661 GN=LOC111487815 PE=3 ...	[more]

BLAST of Cp4.1LG13g11290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01850.1	4.8e-98	68.82	Aldolase-type TIM barrel family protein	[more]
AT3G01850.2	4.8e-98	68.82	Aldolase-type TIM barrel family protein	[more]
AT1G63290.1	1.8e-97	66.79	Aldolase-type TIM barrel family protein	[more]
AT5G61410.1	2.2e-34	34.60	D-ribulose-5-phosphate-3-epimerase	[more]
AT5G61410.2	2.2e-34	34.60	D-ribulose-5-phosphate-3-epimerase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 2..268 e-value: 2.0E-94 score: 316.8
IPR026019	Ribulose-phosphate 3-epimerase	PIRSF	PIRSF001461	RPE	coord: 67..268 e-value: 4.8E-67 score: 223.3 coord: 1..75 e-value: 3.5E-10 score: 37.3
IPR026019	Ribulose-phosphate 3-epimerase	HAMAP	MF_02227	RPE	coord: 4..260 score: 46.6968
IPR000056	Ribulose-phosphate 3-epimerase-like	PFAM	PF00834	Ribul_P_3_epim	coord: 6..39 e-value: 7.8E-7 score: 28.7 coord: 76..245 e-value: 3.8E-57 score: 192.9
IPR000056	Ribulose-phosphate 3-epimerase-like	PANTHER	PTHR11749	RIBULOSE-5-PHOSPHATE-3-EPIMERASE	coord: 1..267
IPR000056	Ribulose-phosphate 3-epimerase-like	PROSITE	PS01086	RIBUL_P_3_EPIMER_2	coord: 182..204
IPR000056	Ribulose-phosphate 3-epimerase-like	CDD	cd00429	RPE	coord: 6..258 e-value: 4.36064E-112 score: 319.81
None	No IPR available	PANTHER	PTHR11749:SF3	RIBULOSE-PHOSPHATE 3-EPIMERASE	coord: 1..267
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 5..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g11290.1	Cp4.1LG13g11290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0019323	pentose catabolic process
biological_process	GO:0009052	pentose-phosphate shunt, non-oxidative branch
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004750	ribulose-phosphate 3-epimerase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives