Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTCATAAACCCAAGCCAACAAATGCACATGTTGTTTCGTCGGCGTTTATTATTTTGTCTGCCTCTTTGGGTTTTCCACAGGAAGTCTCATGCAATTGAACATGATAGTCGGCCTTTATTATCGCCTTTATTATTTCGTCTGCCTCTTTGACTTTTACACAAGGCAGATAGTCTCATGCAATTGAATATGATACTCTTCTGTTAGAATAAAGAGTATTAAATTCAAATTTAACTATGAAAAAATTTTCTAAAATGATACTCTTTTCTTTTGCCATTTTTAGAGGGTTTAAAAAATGAGATTCTTTTTATAATTCACCGGAAGTTGATCCAGAGATTACGGAATGAACCTTTTCAAAGGTTATTGATTTCATCATCTGAACATACTAACACCTAACAACAATAAAAAGAATTACTAACCTCGGTGTAATTAATCAAATCCTAATTTTTTTTCTCATTTCTACCAGGGCAGTCACATCAGGTTGATACCGTCACCGTGACTGACTGAAGGTGCTGTAGGAAGCACATTGCAATGTGATGGTCTGAGGATGACCCGTCATGTCCACGACTCGAATTTCTTCGATACAAAATCCTCATCGTCACCGTAACCTACAACTTCATCATGTTATCGAATCCTTTATGTTTTTGTTTGCATTTCTTGATTTTATGGACTAGCTATGTCATGTTCTTATGTCGATTAAGACTAATCCTTAGAAAATTGATATGTCTCCCACAACTCCTAAAAAACAGAATCAATTTAGACACATTTTTAATTTTGGCACTTGGGTTCAGCTCTAAAGTTTTTGGTTTCATGTTTCACAACTCATATTTTATTGGGTCAAAATAGAAGAAAAAACAAAAAAGAATAGAAGTCAAAATTCTTAAGAAAACAAAAACTCAAATTAAAAATGAACCCAAAAACAAAAACCCAGATAAAAAATAATAAAAAAAAAAAGTAAAATAAAGTTCAGAATGCCATTGATATGCATAAGCTATCCATCAAACTAGTTCTTCTAAATCACAGGATATTATACATCTTCAAACTTGGGCATGTTTTGATGCTTGGCCTCACCTGATGCTGAGGATGCTTTATTATTCTTACTAGGAGCGACCTCAAAAATCTTCTTTTGATGCTTTGATGCAAACTTACTAACAGCAACCTTAAAGGCCTCATCCCAAACAGTAGCAGCTAGGAGAAATTGGCAGACCATTTCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGGACGAGGGAAAACAATAA
mRNA sequence
ATGGGGCAGTCACATCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGGACGAGGGAAAACAATAA
Coding sequence (CDS)
ATGGGGCAGTCACATCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGACCATTCCTCACTATGTATCGTTTGCTTTGAGAAATTGGCAGGACGAGGGAAAACAATAA
Protein sequence
MGQSHQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQDEGKQ
Homology
BLAST of Cp4.1LG13g11060 vs. NCBI nr
Match:
CAD7411460.1 (unnamed protein product, partial [Timema cristinae])
HSP 1 Score: 130 bits (328), Expect = 7.94e-30
Identity = 92/317 (29.02%), Postives = 160/317 (50.47%), Query Frame = 0
Query: 8 IPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHY 67
I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y
Sbjct: 256 IVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRY 315
Query: 68 VSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFA 127
S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A
Sbjct: 316 NSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYA 375
Query: 128 LRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNW 187
+ + I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A+ +
Sbjct: 376 MHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTF 435
Query: 188 QTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIP 247
I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A+ + I
Sbjct: 436 LCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIV 495
Query: 248 HYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVS 307
Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S
Sbjct: 496 RYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNS 555
Query: 308 FALRNWQTIPHYVSFAL 324
+A+ + I Y S+A+
Sbjct: 556 YAMHTFLCIVRYSSYAI 572
BLAST of Cp4.1LG13g11060 vs. NCBI nr
Match:
KAE8612868.1 (hypothetical protein XENTR_v10013021, partial [Xenopus tropicalis])
HSP 1 Score: 110 bits (275), Expect = 2.04e-22
Identity = 84/315 (26.67%), Postives = 138/315 (43.81%), Query Frame = 0
Query: 7 TIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPH 66
++PH S L ++P+ S L ++PH S L ++PH S L + ++PH
Sbjct: 369 SVPHTQSHTLTPTHSVPYTHSHTLSPTHSVPHTQSHTLSPTHSVPHTHSHTLSPYNSVPH 428
Query: 67 YVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSF 126
S L ++PH S L ++PH S L ++P+ S L ++PH S
Sbjct: 429 TQSHTLSPTHSVPHTHSHTLTPTHSLPHTQSHTLSPTHSVPYTQSHTLSPTHSVPHTQSH 488
Query: 127 ALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRN 186
L ++PH S L ++P+ S L ++PH S L ++PH S L
Sbjct: 489 TLTPTHSVPHTQSHTLTPTHSVPYTQSHTLSPTHSVPHTHSHTLSPIHSLPHTQSHTLSP 548
Query: 187 WQTIP----HYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRN 246
++P H S L ++PH S L ++PH S L ++PH S L
Sbjct: 549 THSVPYTQSHTQSHTLSPTHSLPHTQSHTLTPTHSVPHTQSHTLSPTHSVPHTQSHTLTP 608
Query: 247 WQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTI 306
++PH S L ++PH S L ++ H S L + ++P+ S L + ++
Sbjct: 609 THSVPHTQSHTLSPTHSVPHTHSHTLSPIHSVTHTQSHTLSHTHSVPYTQSHTLSHTHSV 668
Query: 307 PHYVSFALRNWQTIP 317
PH S L + ++P
Sbjct: 669 PHTQSHTLSSTHSVP 683
BLAST of Cp4.1LG13g11060 vs. NCBI nr
Match:
XP_036175334.1 (uncharacterized protein LOC118661393 [Myotis myotis])
HSP 1 Score: 78.2 bits (191), Expect = 3.72e-12
Identity = 85/291 (29.21%), Postives = 152/291 (52.23%), Query Frame = 0
Query: 34 QTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIP 93
Q +P +SF + + H S+A R+ + H S+A R+ + H S+A R+ +
Sbjct: 21 QMVP--ISFKYFSQVWLLHSTSWAPRSQVWLLHSTSWAPRSQVWLLHSTSWAPRSQVWLL 80
Query: 94 HYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVS 153
H +S A R+ + H S A R+ + H S+ALR+ + H S+A R+ + H S
Sbjct: 81 HSISRAPRSQVWLLHSTSRAPRSQVWLLHSTSWALRSQVWLLHSTSWAPRSQVWLLHSTS 140
Query: 154 FALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALR 213
+A R+ + H S+A R+ + H +S+A R+ + H S+A R+ + H S+A R
Sbjct: 141 WAPRSQVWLLHSTSWAPRSQVWLLHSISWAPRSQVWLLHSTSWAPRSQVWLLHSTSWAPR 200
Query: 214 NWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQT 273
+ + H S+A R+ + H +S+A R+ + + H +S+A R+ + H +S+A R+
Sbjct: 201 SQVWLLHSTSWAPRSQVWLLHRISWAPRSQEWLLHSISWAPRSQVWLLHSISWAHRSQVW 260
Query: 274 IPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFAL 324
+ H +S A R+ + H +S A R+ + H +S A R+ + H +S+AL
Sbjct: 261 LLHSISRAPRSQVWLLHSISRAPRSQVWLLHSISQAPRSQVWLLHSISWAL 309
BLAST of Cp4.1LG13g11060 vs. NCBI nr
Match:
KAF3833463.1 (hypothetical protein F7725_024667, partial [Dissostichus mawsoni])
HSP 1 Score: 75.5 bits (184), Expect = 1.04e-10
Identity = 65/183 (35.52%), Postives = 92/183 (50.27%), Query Frame = 0
Query: 150 HYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVS 209
H+VSF + PH+VSF + PH+VSF ++ P +VSF + PH+VS
Sbjct: 2347 HFVSFTTSD----PHFVSFT----NSDPHFVSFT----KSDPRFVSFTTSD----PHFVS 2406
Query: 210 F---------ALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTI 269
F +L T+PH+VSF + PH+VSF + PH+VSF +
Sbjct: 2407 FTTQTLTLSPSLNQTLTLPHFVSFT----NSDPHFVSFT----NSDPHFVSFTTSD---- 2466
Query: 270 PHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYV 323
PH+VSF + PH+VSF + PH+VSF + PH+VSF + PH+V
Sbjct: 2467 PHFVSFT----NSDPHFVSFT----NSDPHFVSFTTSD----PHFVSFTTSD----PHFV 2485
BLAST of Cp4.1LG13g11060 vs. NCBI nr
Match:
KAF3833465.1 (hypothetical protein F7725_024669 [Dissostichus mawsoni])
HSP 1 Score: 69.7 bits (169), Expect = 7.01e-09
Identity = 87/277 (31.41%), Postives = 131/277 (47.29%), Query Frame = 0
Query: 9 PHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYV 68
PH+VSF PH+VSF +T PH+ + L PH+VSF ++ P +V
Sbjct: 217 PHFVSFTN---SIDPHFVSFT----KTDPHF-TLTLSPSLIRPHFVSFT----KSDPDFV 276
Query: 69 SFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFAL 128
SF + PH+VSF + PH+VSF + +PH+VSF ++ P +VSF
Sbjct: 277 SFT----NSDPHFVSFT----NSDPHFVSFTTSDPHFVPHFVSFT----KSDPIFVSFT- 336
Query: 129 RNWQTIPHYVSFALRNWQTIPHYVSF---------ALRNWQTIPHYVSFALRNWQTIPHY 188
++ P +VSF ++ P +VSF +L T+P F + PH+
Sbjct: 337 ---KSDPDFVSFT----KSDPIFVSFTKSTLSLSPSLNPTLTLPSLCLFTTSD----PHF 396
Query: 189 VSFA-LRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSF---------ALRNW 248
V+ L ++ PH+VSF + PH+VSF + PH+VSF +L
Sbjct: 397 VTNRPLFLTKSDPHFVSFT----NSDPHFVSFT----NSDPHFVSFTKSDLTLSPSLNQT 441
Query: 249 QTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSF 266
T+P F ++ PH+VSF + PH+VSF
Sbjct: 457 LTLPSLCLFT----KSDPHFVSFT----NSDPHFVSF 441
BLAST of Cp4.1LG13g11060 vs. ExPASy TrEMBL
Match:
A0A7R9DD49 (Hypothetical protein (Fragment) OS=Timema cristinae OX=61476 GN=TCEB3V08_LOCUS10948 PE=4 SV=1)
HSP 1 Score: 130 bits (328), Expect = 3.84e-30
Identity = 92/317 (29.02%), Postives = 160/317 (50.47%), Query Frame = 0
Query: 8 IPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHY 67
I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y
Sbjct: 256 IVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRY 315
Query: 68 VSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFA 127
S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A
Sbjct: 316 NSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYA 375
Query: 128 LRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNW 187
+ + I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A+ +
Sbjct: 376 MHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTF 435
Query: 188 QTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIP 247
I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A+ + I
Sbjct: 436 LCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIV 495
Query: 248 HYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVS 307
Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S
Sbjct: 496 RYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNSYAMHTFLCIVRYNS 555
Query: 308 FALRNWQTIPHYVSFAL 324
+A+ + I Y S+A+
Sbjct: 556 YAMHTFLCIVRYSSYAI 572
BLAST of Cp4.1LG13g11060 vs. ExPASy TrEMBL
Match:
A0A7J5X9H2 (Uncharacterized protein OS=Dissostichus mawsoni OX=36200 GN=F7725_024667 PE=4 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 5.02e-11
Identity = 65/183 (35.52%), Postives = 92/183 (50.27%), Query Frame = 0
Query: 150 HYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVS 209
H+VSF + PH+VSF + PH+VSF ++ P +VSF + PH+VS
Sbjct: 2347 HFVSFTTSD----PHFVSFT----NSDPHFVSFT----KSDPRFVSFTTSD----PHFVS 2406
Query: 210 F---------ALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTI 269
F +L T+PH+VSF + PH+VSF + PH+VSF +
Sbjct: 2407 FTTQTLTLSPSLNQTLTLPHFVSFT----NSDPHFVSFT----NSDPHFVSFTTSD---- 2466
Query: 270 PHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYV 323
PH+VSF + PH+VSF + PH+VSF + PH+VSF + PH+V
Sbjct: 2467 PHFVSFT----NSDPHFVSFT----NSDPHFVSFTTSD----PHFVSFTTSD----PHFV 2485
BLAST of Cp4.1LG13g11060 vs. ExPASy TrEMBL
Match:
A0A7J5X8Z7 (Uncharacterized protein OS=Dissostichus mawsoni OX=36200 GN=F7725_024669 PE=4 SV=1)
HSP 1 Score: 69.7 bits (169), Expect = 3.40e-09
Identity = 87/277 (31.41%), Postives = 131/277 (47.29%), Query Frame = 0
Query: 9 PHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYV 68
PH+VSF PH+VSF +T PH+ + L PH+VSF ++ P +V
Sbjct: 217 PHFVSFTN---SIDPHFVSFT----KTDPHF-TLTLSPSLIRPHFVSFT----KSDPDFV 276
Query: 69 SFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFAL 128
SF + PH+VSF + PH+VSF + +PH+VSF ++ P +VSF
Sbjct: 277 SFT----NSDPHFVSFT----NSDPHFVSFTTSDPHFVPHFVSFT----KSDPIFVSFT- 336
Query: 129 RNWQTIPHYVSFALRNWQTIPHYVSF---------ALRNWQTIPHYVSFALRNWQTIPHY 188
++ P +VSF ++ P +VSF +L T+P F + PH+
Sbjct: 337 ---KSDPDFVSFT----KSDPIFVSFTKSTLSLSPSLNPTLTLPSLCLFTTSD----PHF 396
Query: 189 VSFA-LRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSF---------ALRNW 248
V+ L ++ PH+VSF + PH+VSF + PH+VSF +L
Sbjct: 397 VTNRPLFLTKSDPHFVSFT----NSDPHFVSFT----NSDPHFVSFTKSDLTLSPSLNQT 441
Query: 249 QTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSF 266
T+P F ++ PH+VSF + PH+VSF
Sbjct: 457 LTLPSLCLFT----KSDPHFVSFT----NSDPHFVSF 441
BLAST of Cp4.1LG13g11060 vs. ExPASy TrEMBL
Match:
A0A7R9GQ51 (Hypothetical protein OS=Timema cristinae OX=61476 GN=TCEB3V08_LOCUS1301 PE=4 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 1.34e-08
Identity = 88/317 (27.76%), Postives = 137/317 (43.22%), Query Frame = 0
Query: 5 HQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTI 64
H T P V+ L + T P V+ L + T P V+ L + T P ++ L + T
Sbjct: 6399 HSTKPGVVTGDLTEYTTKPGIVTGGLTVYSTKPGVVTGDLTEYTTKPGVITGDLTEYPTK 6458
Query: 65 PHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYV 124
P V+ L + T P V+ L + T P V+ +L + T V+ L + T P V
Sbjct: 6459 PGIVAGGLTEYSTKPGVVTGGLTEYTTKPGIVTGSLTEYSTKAGVVTGDLTEYTTKPGIV 6518
Query: 125 SFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFAL 184
+ L + T P V+ L + T V+ L + T P V+ L + P V+ L
Sbjct: 6519 TGDLTEYPTKPGMVTGDLTEYTTKLGVVTGGLTKYPTKPGIVTSDLTEYTNKPGIVTGDL 6578
Query: 185 RNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQ 244
+ T P V+ LR + T P V+ L + T V+ LR + T P V+ L +
Sbjct: 6579 TKYTTKPGVVTGDLRKYTTKPGVVTGGLTEYSTEAGLVTGDLREYTTKPGVVTGDLTEYT 6638
Query: 245 TIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPH 304
T P V+ L ++ T P V+ L + T P V+ + + T P V+ L + T P
Sbjct: 6639 TKPGVVTGDLTDYTTKPGIVTGDLTEYTTKPGVVTGSFTEYSTKPGIVTGDLIEYITKPG 6698
Query: 305 YVSFALRNWQTIPHYVS 321
V+ L + T P V+
Sbjct: 6699 VVTGGLTEYTTKPGVVT 6715
BLAST of Cp4.1LG13g11060 vs. ExPASy TrEMBL
Match:
A0A7R9HTN0 (Hypothetical protein (Fragment) OS=Timema monikensis OX=170555 GN=TMSB3V08_LOCUS11352 PE=4 SV=1)
HSP 1 Score: 58.9 bits (141), Expect = 7.53e-06
Identity = 39/135 (28.89%), Postives = 73/135 (54.07%), Query Frame = 0
Query: 120 IPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHY 179
I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y S+A+ + I Y
Sbjct: 7 IVRYNSYAMHTFLYIVRYNSYAMHTFLYIARYNSYAMHTFLCIVPYNSYAMHTFLCIVRY 66
Query: 180 VSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFALRNWQTIPHYVSFA 239
+S+A+ ++ I Y ++A+ ++ I Y S+A+ + I Y S+A+ + I Y S+A
Sbjct: 67 ISYAMHSFLCIVLYNNYAMHSFLYIVRYNSYAMHTFLCIVPYNSYAMHTFFCIVRYSSYA 126
Query: 240 LRNWQTIPHYVSFAL 254
+ ++ I Y S+A+
Sbjct: 127 IHSFLCIVRYSSYAM 141
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| CAD7411460.1 | 7.94e-30 | 29.02 | unnamed protein product, partial [Timema cristinae] | [more] |
| KAE8612868.1 | 2.04e-22 | 26.67 | hypothetical protein XENTR_v10013021, partial [Xenopus tropicalis] | [more] |
| XP_036175334.1 | 3.72e-12 | 29.21 | uncharacterized protein LOC118661393 [Myotis myotis] | [more] |
| KAF3833463.1 | 1.04e-10 | 35.52 | hypothetical protein F7725_024667, partial [Dissostichus mawsoni] | [more] |
| KAF3833465.1 | 7.01e-09 | 31.41 | hypothetical protein F7725_024669 [Dissostichus mawsoni] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A7R9DD49 | 3.84e-30 | 29.02 | Hypothetical protein (Fragment) OS=Timema cristinae OX=61476 GN=TCEB3V08_LOCUS10... | [more] |
| A0A7J5X9H2 | 5.02e-11 | 35.52 | Uncharacterized protein OS=Dissostichus mawsoni OX=36200 GN=F7725_024667 PE=4 SV... | [more] |
| A0A7J5X8Z7 | 3.40e-09 | 31.41 | Uncharacterized protein OS=Dissostichus mawsoni OX=36200 GN=F7725_024669 PE=4 SV... | [more] |
| A0A7R9GQ51 | 1.34e-08 | 27.76 | Hypothetical protein OS=Timema cristinae OX=61476 GN=TCEB3V08_LOCUS1301 PE=4 SV=... | [more] |
| A0A7R9HTN0 | 7.53e-06 | 28.89 | Hypothetical protein (Fragment) OS=Timema monikensis OX=170555 GN=TMSB3V08_LOCUS... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
