Cp4.1LG13g10400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g10400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Sorting and assembly machinery component 50-like protein
Location	Cp4.1LG13: 6902817 .. 6906354 (-)
RNA-Seq Expression	Cp4.1LG13g10400
Synteny	Cp4.1LG13g10400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCATGGAGTTAGAATCCGATGAATCAATCAGAGTTCGCGCAGGCAGCATTGGTTTTCTTGTTGAATTCTGAGTAATGGAAGAAAAGGGCAAAGTAGGCGTCGTTGTGTGTTGAAGCCAGGGCTGGATTCTTTCATCTCTGCTGAATTGATCGTTAACCGCCGAGAATACTGCTCCAATCGTTCTCATTTCAGAATCTGCGATTTTCGAGTGAGTTCATTCAACCATTGGAAATTACTGTCTGTTTCTTAATCATTGTAAATGGAAAAATCCGAGGAAGTAGGGAAAAATACGATAAGAACGAGCTCCGAGGAGGAGGAGGAGGAGGAGGTAGAGCGTGAACCTTCCAATTTTGAAAATGGCGATGGAGAAGATGAGGAAGTTGAAGACGAGGAAGAAGACGAGGAAGATGAGGATGATGAGGATGACGATGAGGAGGAACCGCCGCGGAGGAAGCCTATTTTGGATGCTTCTAGGTTGATTGCTCAAAGGTCTAAGTTAGAGAATCTGGTTGAGCGAATGAGGAAGGAGAAGGTCAGACTTCGGGTTCATGATATTTTGATCAAGGGAAACTCGAAGACCAAGGATTCTCTAATCGAGGCCGAAGTGGAGGCTATTAAGAATGCCTCAACTATGCAAGAACTGCTGGAGGCCGCGGGCGTAGCCAATGCCAATCTCCAGAGGCTCGAGATCTTCGACTCTGTCAAGATTACTCTTGATTCAGGCCCGCCGGAGCTCCCTGGTACCGCAAATGTTGTCATCGAGGTTGTGGAGACGGGCAACCCTCTCTCCGGCGAATGCGGTGCTTACACAAAACCTGCGGTAAGATTTTGTTCTGTATGTATATATGTAGATATTCGTGTCTAATGCGTTAATCAATGGCTTGTTGTTTGATAAGATATTACCGAAGAAGGAAGAAAAGACCTGCATTGATATAGTTGTCTACCCCTCTAAATCTAAACGGTTTGATATCTTTTATGTGGCTTGTGCTTGTCGTGGTTCCCTCTTCAGATGTGCAAATTCTATACCCTAACATATGACAGAAGTGATTTGCTGCAATTTAGAATCTAAAAGTGAGCTTCCCAGGTAGTAAACAATGTCGATCGTATGCTCCCTGTATTTTGTACCTTATACACTATCTGGGCATAAAACTCATTAGAACTGTTCTGGAGCATGAAGGTCGTTACATTGGTGATCTTACACTCATTTCTTGCCTTAAGAATGGTTGTTTGTTCGAGTCATTATTCAGTATATGAGTATGAGAGTGAAGTGAACTATGTAGTGTCTTGAATTAAAGTAGATTGGAAGGAGGGTCATACTGTTGTCCGTGTGTGGAAGCACACTTCTCTGTCACTAGTAATGTGAAACCAAGATTTTTTTTTTCCCACTCTTATCATTGTTTTCAGAAACTTTACTCATGGCACCAAACCTCGTTACTATGGATATCGAACTTTTTAATGATTATTACATAACAATTAGAAACCCTGAGTTCTTAAACTCTGGTTATTTTTTTATGTGATCTCACTGTTCAAAACCAGACTATTGTTCCCTTCGATGATATATATATATATATATATATATATATATATATATATTTGTATAATTGGAATTCGTGCATGAACTATTTGGCTTGCTATCTCTAGTGGGAAGTTTGAAGTGGTATAATGCTTTTGTAGGCTCGTTCGTGGACTTTTGAAGGTTCTGTTAAGTATAAAAATTGGCTTGGATATGGGGATTTATGGGATGGCTCTTTGGCCTACGGTCCTAATCAAACATCTGAGGTGAGTGCCGGTGTTTATTTACCTAGGCTGAAGCGATTGATGACTCCTTTGGTGGCACGACTATCCCTACTTTCCCAAGATTGGATGGAGTTTTCATCTTACAAAGAGCGGTCTTTAGGTCTTTCTCTTGGTTTATATTCTACTAAGTATCATGATTTGGGATACAACCTTGGATGGCGCACCATAACTGACCCTTCACAGATGGCATCTAATTCAATAAGGAGACAACTTGGAAATAGTTTACTTTCTTCTCTAAAATATACTTTTAAGGTTGACAAGAGGAATTCAGCAGTGAGGCCAACTCGAGGATATGCTTTTGTTTCTACTAGTCAAATTGGTGGCCTTGCACCTGATCACCGGAGCTTGCGATTTGTCCGCCAGGTTTTCTTCTTGTCTTTTTGTCTCTCTTGTAACAACAAAACATTTGCGTAAGCCTGCATGTAGTTAACAGTTCGTTGTTGGACATTCATACTTGTACCATGCAATACTTGCTTCGTTCAATGTTGAGGAAAACTATGTTTCCAACGTTTGACAGGAATTTGATCTACGGTATGCCATTCCTTTCGGCTTTGATCGTGCTGCCATGAACTTTGGAGTCTCTGCCGGTGTTGTCCTTCCTTGGGGAAATGGATTCTTGAACAAGCCATCATCCCTTCCAGAACGCTTTTTCTTAGGTGGTGATTTCTCTCCAGTATGCACCATTGGAGGCCCCACAACTGTGTGGGGATTTAAAACGCGTGGAATGGGACCAACTGAGCCAAGGCGGGAAGTGAGAGACGAAAATAAGGGTGAAGACAATGATGCTCTTGGAAGGGATTTTGTTGGAGGGGATCTTGCAGTCACTGCTTTTGCTGATCTTTCATTTGACCTCCCACTTCGCTGGTTAAGAGAACATGGAATCCACGGACACATCTTTGCTGGTGCAGGGAACCTTGCTAAGTTGACAGAGAATGAGTTTCGTAGTTTCTCTTTTCAGAAGTTCATGGAAACATTCCGTACCTCTGTAGGAGTTGGGATTGTGGTTCCAACAAGACTCTTCCGCCTAGAGGTCAGTCGTAATCTCTGATTTGTGTGTTTTATTATTTTGGTGCCTAATTTATTGGTCTGGGTTTGATCCTATATAGTGTCATGCTTGCTGTTTCCACCGTATAATTTTCTTTTGAACAGGAAAAGGGACACCTATTGTAGAATGCTGTTCGATCTTTTATATACTTACTACTTATTCTAGTTTGGTTTATGAACAGGGGAACTTCTACTACATATTGAAGCAACAAGAGCATGATCGTGGAAAAACTGGCTTTCGGTTTAGCATTTCTGCTCCATCATAAATATTGAATTTTGACGAGATTTCATGTCCAGGAGTTACAGAGTAAGGCGGAAGTTAATTTCTTTCTGGCAATTTGTTTCATTTGCTTATTGACAGCTGCCCTTTCTTAGTTACAATTTGAACTGGTTGAAAAAACTTCCTTTTACACGTCCAGGGAAGTGACAAAAAAAGGAAAAAGAAAGTTTTGCTTCAACCATGGAGAATGGAGAATAATTTGATTTGTGATGCTGTATTTGAACAGGTTACGGAAATTTCCCCTCAAAATTCGTTCCATTAACCCAAATGGGCGGATAATTTTCTTCCTCCATCAATGAAATGAGACTTTTTCATTTCATAGCTTATATGGTTTATGATTTTCTGTTTCTCCACTATATATTTTGTGCTCATCATATGATCAATTTTGCTTTGAATAGAATCAAATACCTTCATGC

mRNA sequence

TCCATGGAGTTAGAATCCGATGAATCAATCAGAGTTCGCGCAGGCAGCATTGGTTTTCTTGTTGAATTCTGAGTAATGGAAGAAAAGGGCAAAGTAGGCGTCGTTGTGTGTTGAAGCCAGGGCTGGATTCTTTCATCTCTGCTGAATTGATCGTTAACCGCCGAGAATACTGCTCCAATCGTTCTCATTTCAGAATCTGCGATTTTCGAGTGAGTTCATTCAACCATTGGAAATTACTGTCTGTTTCTTAATCATTGTAAATGGAAAAATCCGAGGAAGTAGGGAAAAATACGATAAGAACGAGCTCCGAGGAGGAGGAGGAGGAGGAGGTAGAGCGTGAACCTTCCAATTTTGAAAATGGCGATGGAGAAGATGAGGAAGTTGAAGACGAGGAAGAAGACGAGGAAGATGAGGATGATGAGGATGACGATGAGGAGGAACCGCCGCGGAGGAAGCCTATTTTGGATGCTTCTAGGTTGATTGCTCAAAGGTCTAAGTTAGAGAATCTGGTTGAGCGAATGAGGAAGGAGAAGGTCAGACTTCGGGTTCATGATATTTTGATCAAGGGAAACTCGAAGACCAAGGATTCTCTAATCGAGGCCGAAGTGGAGGCTATTAAGAATGCCTCAACTATGCAAGAACTGCTGGAGGCCGCGGGCGTAGCCAATGCCAATCTCCAGAGGCTCGAGATCTTCGACTCTGTCAAGATTACTCTTGATTCAGGCCCGCCGGAGCTCCCTGGTACCGCAAATGTTGTCATCGAGGTTGTGGAGACGGGCAACCCTCTCTCCGGCGAATGCGGTGCTTACACAAAACCTGCGGCTCGTTCGTGGACTTTTGAAGGTTCTGTTAAGTATAAAAATTGGCTTGGATATGGGGATTTATGGGATGGCTCTTTGGCCTACGGTCCTAATCAAACATCTGAGGTGAGTGCCGGTGTTTATTTACCTAGGCTGAAGCGATTGATGACTCCTTTGGTGGCACGACTATCCCTACTTTCCCAAGATTGGATGGAGTTTTCATCTTACAAAGAGCGGTCTTTAGGTCTTTCTCTTGGTTTATATTCTACTAAGTATCATGATTTGGGATACAACCTTGGATGGCGCACCATAACTGACCCTTCACAGATGGCATCTAATTCAATAAGGAGACAACTTGGAAATAGTTTACTTTCTTCTCTAAAATATACTTTTAAGGTTGACAAGAGGAATTCAGCAGTGAGGCCAACTCGAGGATATGCTTTTGTTTCTACTAGTCAAATTGGTGGCCTTGCACCTGATCACCGGAGCTTGCGATTTGTCCGCCAGGAATTTGATCTACGGTATGCCATTCCTTTCGGCTTTGATCGTGCTGCCATGAACTTTGGAGTCTCTGCCGGTGTTGTCCTTCCTTGGGGAAATGGATTCTTGAACAAGCCATCATCCCTTCCAGAACGCTTTTTCTTAGGTGGTGATTTCTCTCCAGTATGCACCATTGGAGGCCCCACAACTGTGTGGGGATTTAAAACGCGTGGAATGGGACCAACTGAGCCAAGGCGGGAAGTGAGAGACGAAAATAAGGGTGAAGACAATGATGCTCTTGGAAGGGATTTTGTTGGAGGGGATCTTGCAGTCACTGCTTTTGCTGATCTTTCATTTGACCTCCCACTTCGCTGGTTAAGAGAACATGGAATCCACGGACACATCTTTGCTGGTGCAGGGAACCTTGCTAAGTTGACAGAGAATGAGTTTCGTAGTTTCTCTTTTCAGAAGTTCATGGAAACATTCCGTACCTCTGTAGGAGTTGGGATTGTGGTTCCAACAAGACTCTTCCGCCTAGAGGGGAACTTCTACTACATATTGAAGCAACAAGAGCATGATCGTGGAAAAACTGGCTTTCGGTTTAGCATTTCTGCTCCATCATAAATATTGAATTTTGACGAGATTTCATGTCCAGGAGTTACAGAGGAAGTGACAAAAAAAGGAAAAAGAAAGTTTTGCTTCAACCATGGAGAATGGAGAATAATTTGATTTGTGATGCTGTATTTGAACAGGTTACGGAAATTTCCCCTCAAAATTCGTTCCATTAACCCAAATGGGCGGATAATTTTCTTCCTCCATCAATGAAATGAGACTTTTTCATTTCATAGCTTATATGGTTTATGATTTTCTGTTTCTCCACTATATATTTTGTGCTCATCATATGATCAATTTTGCTTTGAATAGAATCAAATACCTTCATGC

Coding sequence (CDS)

ATGGAAAAATCCGAGGAAGTAGGGAAAAATACGATAAGAACGAGCTCCGAGGAGGAGGAGGAGGAGGAGGTAGAGCGTGAACCTTCCAATTTTGAAAATGGCGATGGAGAAGATGAGGAAGTTGAAGACGAGGAAGAAGACGAGGAAGATGAGGATGATGAGGATGACGATGAGGAGGAACCGCCGCGGAGGAAGCCTATTTTGGATGCTTCTAGGTTGATTGCTCAAAGGTCTAAGTTAGAGAATCTGGTTGAGCGAATGAGGAAGGAGAAGGTCAGACTTCGGGTTCATGATATTTTGATCAAGGGAAACTCGAAGACCAAGGATTCTCTAATCGAGGCCGAAGTGGAGGCTATTAAGAATGCCTCAACTATGCAAGAACTGCTGGAGGCCGCGGGCGTAGCCAATGCCAATCTCCAGAGGCTCGAGATCTTCGACTCTGTCAAGATTACTCTTGATTCAGGCCCGCCGGAGCTCCCTGGTACCGCAAATGTTGTCATCGAGGTTGTGGAGACGGGCAACCCTCTCTCCGGCGAATGCGGTGCTTACACAAAACCTGCGGCTCGTTCGTGGACTTTTGAAGGTTCTGTTAAGTATAAAAATTGGCTTGGATATGGGGATTTATGGGATGGCTCTTTGGCCTACGGTCCTAATCAAACATCTGAGGTGAGTGCCGGTGTTTATTTACCTAGGCTGAAGCGATTGATGACTCCTTTGGTGGCACGACTATCCCTACTTTCCCAAGATTGGATGGAGTTTTCATCTTACAAAGAGCGGTCTTTAGGTCTTTCTCTTGGTTTATATTCTACTAAGTATCATGATTTGGGATACAACCTTGGATGGCGCACCATAACTGACCCTTCACAGATGGCATCTAATTCAATAAGGAGACAACTTGGAAATAGTTTACTTTCTTCTCTAAAATATACTTTTAAGGTTGACAAGAGGAATTCAGCAGTGAGGCCAACTCGAGGATATGCTTTTGTTTCTACTAGTCAAATTGGTGGCCTTGCACCTGATCACCGGAGCTTGCGATTTGTCCGCCAGGAATTTGATCTACGGTATGCCATTCCTTTCGGCTTTGATCGTGCTGCCATGAACTTTGGAGTCTCTGCCGGTGTTGTCCTTCCTTGGGGAAATGGATTCTTGAACAAGCCATCATCCCTTCCAGAACGCTTTTTCTTAGGTGGTGATTTCTCTCCAGTATGCACCATTGGAGGCCCCACAACTGTGTGGGGATTTAAAACGCGTGGAATGGGACCAACTGAGCCAAGGCGGGAAGTGAGAGACGAAAATAAGGGTGAAGACAATGATGCTCTTGGAAGGGATTTTGTTGGAGGGGATCTTGCAGTCACTGCTTTTGCTGATCTTTCATTTGACCTCCCACTTCGCTGGTTAAGAGAACATGGAATCCACGGACACATCTTTGCTGGTGCAGGGAACCTTGCTAAGTTGACAGAGAATGAGTTTCGTAGTTTCTCTTTTCAGAAGTTCATGGAAACATTCCGTACCTCTGTAGGAGTTGGGATTGTGGTTCCAACAAGACTCTTCCGCCTAGAGGGGAACTTCTACTACATATTGAAGCAACAAGAGCATGATCGTGGAAAAACTGGCTTTCGGTTTAGCATTTCTGCTCCATCATAA

Protein sequence

MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEEPPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIKNASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLVARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLGNSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFRFSISAPS

Homology

[Close]

BLAST of Cp4.1LG13g10400 vs. ExPASy Swiss-Prot
Match: Q8BGH2 (Sorting and assembly machinery component 50 homolog OS=Mus musculus OX=10090 GN=Samm50 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 7.2e-29
Identity = 127/462 (27.49%), Postives = 202/462 (43.72%), Query Frame = 0


Query: 96  VHDILIKGNSKTKDSLIEAEVEAIKNASTMQELLEAAGVANANLQRLEIFDSVKITLDS- 155
           V  +   G  +TKD +I  E+  +  A  + E++  +  A   L RL IF  V + +D+ 
Sbjct: 47  VQHVHFDGLGRTKDDIIICEIGEVFKAKNLIEVMRRSHEAREKLLRLGIFRQVDVLIDTC 106

Query: 156 -GPPELPGTANVVIEVVETGNPLSGECGAYTKPAARSWTFEGS----VKYKNWLGYGDLW 215
            G   LP   +V  EV E    L    G+Y      +   EGS    +K  N LG  +  
Sbjct: 107 HGEDALPNGLDVTFEVTE----LRRLTGSYNTMVGNN---EGSMVLGLKLPNLLGRAEKV 166

Query: 216 DGSLAYGPNQTSEVSAGVYLPRLKRLMTPLVARLSLLSQDWMEFSSYKERSLGL----SL 275
               +YG  +TS      + P+           L  ++  +  +SS +E   G+    S 
Sbjct: 167 TFQFSYGTKETS-YGLSFFKPQPGNFERNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSF 226

Query: 276 GLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLGNSLLSSLKYTFKVDKRNSAVRPTRG 335
            L+ T  H + +   WR +   S+ AS ++R++ G+SL SSL +   +D RNS++ P RG
Sbjct: 227 PLWKTS-HTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRG 286

Query: 336 YAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVLPWGNGFLNK 395
             F    ++ G       + F++++F+L+   P   D +  +  +  G+++P G    +K
Sbjct: 287 ALFKVNQELAGYTGG--DVSFIKEDFELQLNKPLALD-SVFSTSLWGGMLVPIG----DK 346

Query: 396 PSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGEDNDALGRDFV 455
           PSS+ +RF+L          GGPT+V GF    +GP         +++G        D++
Sbjct: 347 PSSIADRFYL----------GGPTSVRGFSMHSIGP---------QSEG--------DYL 406

Query: 456 GGDLAVTAFADLSFDLPLRWLREHGIHG-----HIFAGAGNLAKLTENEFRSFSFQKFME 515
           GG+        L   LP R     G  G     H F  AGNL  L   E      +K  E
Sbjct: 407 GGEAYWAGGLHLYTPLPFR--PGQGGFGELFRTHFFLNAGNLCNLNYGEGPKAHIRKLAE 462

Query: 516 TFRTSVGVGIVVPT-RLFRLEGNFYYILKQQEHDRGKTGFRF 542
             R S G G+V+    + RLE N+   +  Q  DR   G +F
Sbjct: 467 CIRWSYGAGVVLRLGNIARLELNYCIPMGVQGGDRICDGVQF 462

[Close]

BLAST of Cp4.1LG13g10400 vs. ExPASy Swiss-Prot
Match: Q9Y512 (Sorting and assembly machinery component 50 homolog OS=Homo sapiens OX=9606 GN=SAMM50 PE=1 SV=3)

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-27
Identity = 126/462 (27.27%), Postives = 200/462 (43.29%), Query Frame = 0


Query: 96  VHDILIKGNSKTKDSLIEAEVEAIKNASTMQELLEAAGVANANLQRLEIFDSVKITLDS- 155
           V  +   G  +TKD +I  E+  +  A  + E++  +  A   L RL IF  V + +D+ 
Sbjct: 47  VQHVHFDGLGRTKDDIIICEIGDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106

Query: 156 -GPPELPGTANVVIEVVETGNPLSGECGAYTKPAARSWTFEGS----VKYKNWLGYGDLW 215
            G   LP   +V  EV E    L    G+Y      +   EGS    +K  N LG  +  
Sbjct: 107 QGDDALPNGLDVTFEVTE----LRRLTGSYNTMVGNN---EGSMVLGLKLPNLLGRAEKV 166

Query: 216 DGSLAYGPNQTSEVSAGVYLPRLKRLMTPLVARLSLLSQDWMEFSSYKERSLGL----SL 275
               +YG  +TS      + PR           L  ++  +  +SS +E   G+    S 
Sbjct: 167 TFQFSYGTKETS-YGLSFFKPRPGNFERNFSVNLYKVTGQF-PWSSLRETDRGMSAEYSF 226

Query: 276 GLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLGNSLLSSLKYTFKVDKRNSAVRPTRG 335
            ++ T  H + +   WR +   S+ AS ++R++ G+SL SSL +   +D RNS++ P RG
Sbjct: 227 PIWKTS-HTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRG 286

Query: 336 YAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVLPWGNGFLNK 395
                  ++ G       + F++++F+L+      FD +  +     G+++P G    +K
Sbjct: 287 ALLKVNQELAGYTGG--DVSFIKEDFELQLNKQLIFD-SVFSASFWGGMLVPIG----DK 346

Query: 396 PSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGEDNDALGRDFV 455
           PSS+ +RF+L          GGPT++ GF    +GP         +++G        D++
Sbjct: 347 PSSIADRFYL----------GGPTSIRGFSMHSIGP---------QSEG--------DYL 406

Query: 456 GGDLAVTAFADLSFDLPLRWLREHGIHG-----HIFAGAGNLAKLTENEFRSFSFQKFME 515
           GG+        L   LP R     G  G     H F  AGNL  L   E      +K  E
Sbjct: 407 GGEAYWAGGLHLYTPLPFR--PGQGGFGELFRTHFFLNAGNLCNLNYGEGPKAHIRKLAE 462

Query: 516 TFRTSVGVGIVVPT-RLFRLEGNFYYILKQQEHDRGKTGFRF 542
             R S G GIV+    + RLE N+   +  Q  DR   G +F
Sbjct: 467 CIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQF 462

[Close]

BLAST of Cp4.1LG13g10400 vs. ExPASy Swiss-Prot
Match: Q5U3I0 (Sorting and assembly machinery component 50 homolog B OS=Danio rerio OX=7955 GN=samm50b PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 4.0e-27
Identity = 124/461 (26.90%), Postives = 203/461 (44.03%), Query Frame = 0


Query: 96  VHDILIKGNSKTKDSLIEAEVEAIKNASTMQELLEAAGVANANLQRLEIFDSVKITLD-- 155
           V  + I+G  +TK+  +  E+  +  A  + E++  +  A   L RL IF  V++ +D  
Sbjct: 47  VQHVNIEGLGRTKEDYLGYEISDVFTARNLVEVMRKSHEARQRLLRLGIFRDVEVVIDIS 106

Query: 156 SGPPELPGTANVVIEVVETGNPLSGECGAYTKPAARSWTFEGS----VKYKNWLGYGDLW 215
            G   LP   +V  EV E    L    G+Y      +   EGS    +K  N LG G+  
Sbjct: 107 EGADALPNGLDVTFEVTE----LKRLTGSYNTMVGNN---EGSMVLGIKLPNMLGRGEKL 166

Query: 216 DGSLAYGPNQTSEVSAGVYLPRLKRLMTPLVARLSLLSQDWMEFSSYKERSLG----LSL 275
               +YG  +TS      + P+           L  ++  +  +SS KE   G    LSL
Sbjct: 167 TFQFSYGTKETS-YGLSFFKPQSGYFERNFTVNLYKVTGQF-PWSSLKETDRGVSTELSL 226

Query: 276 GLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLGNSLLSSLKYTFKVDKRNSAVRPTRG 335
            L+ T  H L +   WR +   ++ AS ++R + G++L S+L +T  VD RNSA+ P +G
Sbjct: 227 PLWMTD-HTLKWEGVWRELGCLARSASFAVREESGHTLKSALSHTMVVDTRNSAILPRKG 286

Query: 336 YAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVLPWGNGFLNK 395
                  ++ G         F++++ +L+    F +  + ++  +  G++ P G     +
Sbjct: 287 ALLRINQELAGYTGG--DANFLKEDVELQLNKQFIWG-SVLSASLWGGMIYPLG----AQ 346

Query: 396 PSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGEDNDALGRDFV 455
           P+S+ +RF+L          GGPT+V GF    +GP         +++G        D++
Sbjct: 347 PTSIADRFYL----------GGPTSVRGFGMYSIGP---------QSEG--------DYL 406

Query: 456 GGDLAVTAFADLSFDLPLRWLREHGI----HGHIFAGAGNLAKLTENEFRSFSFQKFMET 515
           GG+        L   LP R   + G+      H F  AGN+  L   E      QK  E 
Sbjct: 407 GGEAYWAGGLHLYTPLPFR-SNKGGLADLFRTHFFLNAGNICNLNYGEGPRAHLQKLAEC 462

Query: 516 FRTSVGVGIVVPT-RLFRLEGNFYYILKQQEHDRGKTGFRF 542
            R S G GI++    + RLE N+ + +  Q  DR   G +F
Sbjct: 467 IRWSYGAGIILRLGNIARLELNYCFPMGVQSGDRICDGVQF 462

[Close]

BLAST of Cp4.1LG13g10400 vs. ExPASy Swiss-Prot
Match: Q2HJ55 (Sorting and assembly machinery component 50 homolog OS=Bos taurus OX=9913 GN=SAMM50 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-26
Identity = 124/461 (26.90%), Postives = 199/461 (43.17%), Query Frame = 0


Query: 96  VHDILIKGNSKTKDSLIEAEVEAIKNASTMQELLEAAGVANANLQRLEIFDSVKITLDS- 155
           V  +   G  +TKD +I  E+  +  A  + E++  +  A   L RL IF  V + +D+ 
Sbjct: 47  VQHVHFDGLGRTKDDIIMYEIRDVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTC 106

Query: 156 -GPPELPGTANVVIEVVETGNPLSGECGAYTKPAARSWTFEGS----VKYKNWLGYGDLW 215
            G   LP   +V  EV E    L    G+Y      +   EGS    +K  N LG  +  
Sbjct: 107 QGDDALPNGLDVTFEVTE----LRRLTGSYNTMVGNN---EGSMVLGLKLPNLLGRAEKV 166

Query: 216 DGSLAYGPNQTSEVSAGVYLPRLKRLMTPLVARLSLLSQDWMEFSSYKERSLGLSLGLYS 275
               +YG  +TS      + P+           L  ++  +  +SS +E   G+S     
Sbjct: 167 TFQFSYGTKETS-YGLSFFKPQPGNFDRNFSVNLYKVTGQF-PWSSLRETDRGVSAEYSF 226

Query: 276 TKY---HDLGYNLGWRTITDPSQMASNSIRRQLGNSLLSSLKYTFKVDKRNSAVRPTRGY 335
             +   H + +   WR +   S++AS ++R++ G+SL SSL ++  +D RNS++ P RG 
Sbjct: 227 PTWKTSHTVKWEGVWRELGCLSRVASFAVRKESGHSLKSSLSHSMVIDSRNSSILPKRGA 286

Query: 336 AFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVLPWGNGFLNKP 395
                 ++ G       + F++++F+L+       D    +  +  G+++P G    +KP
Sbjct: 287 LLKVNQELAGYTGG--DVSFLKEDFELQLNKQLILD-TVFSASLWGGMLVPMG----DKP 346

Query: 396 SSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGEDNDALGRDFVG 455
           SS+ +RF+L          GGPT+V GF    +GP         +++G        D++G
Sbjct: 347 SSIADRFYL----------GGPTSVRGFSMHSVGP---------QSEG--------DYLG 406

Query: 456 GDLAVTAFADLSFDLPLRWLREHGIHG-----HIFAGAGNLAKLTENEFRSFSFQKFMET 515
           G+        L   LP R     G  G     H F  AGNL  L   E      +K  E 
Sbjct: 407 GEAYWAGGLHLYTPLPFR--PGQGGFGELFRTHFFLNAGNLCNLNYGEGPKAHIRKLAEC 462

Query: 516 FRTSVGVGIVVPT-RLFRLEGNFYYILKQQEHDRGKTGFRF 542
            R S G GIV+    + RLE N+   +  Q  DR   G +F
Sbjct: 467 IRWSYGAGIVLRLGNIARLELNYCVPMGVQRGDRICDGVQF 462

[Close]

BLAST of Cp4.1LG13g10400 vs. ExPASy Swiss-Prot
Match: Q6PA35 (Sorting and assembly machinery component 50 homolog B OS=Xenopus laevis OX=8355 GN=samm50-b PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-26
Identity = 132/506 (26.09%), Postives = 221/506 (43.68%), Query Frame = 0


Query: 52  DDEDDDEEEPPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSL 111
           DD D  E EP +++ IL+   ++ QR   E L                      +TKD L
Sbjct: 23  DDADLVEVEPEKKQEILENKDVVVQRVHFEGL---------------------GRTKDDL 82

Query: 112 IEAEVEAIKNASTMQELLEAAGVANANLQRLEIFDSVKITLDS--GPPELPGTANVVIEV 171
           I  E+  +  A  + E++  +  A   L RL +F +V++ +D+  G   +P   +V  EV
Sbjct: 83  IAHEIGQVFKAKNLIEVMRKSHEAREKLLRLGVFRNVEVLIDTSEGEDAVPNGLDVTFEV 142

Query: 172 VETGNPLSGECGAYTKPAARSWTFEGS----VKYKNWLGYGDLWDGSLAYGPNQTSEVSA 231
            E    L    G+Y      +   EGS    +K+ N  G  +      +YG  +TS    
Sbjct: 143 TE----LRRLTGSYNTMVGNN---EGSMVLGLKFPNLFGRAEKMTFQFSYGTKETS-YGL 202

Query: 232 GVYLPRLKRLMTPLVARLSLLSQDWMEFSSYKERSLGLS----LGLYSTKYHDLGYNLGW 291
             + P++          L  ++  +  +SS +E   G+S      ++ T  H L +   W
Sbjct: 203 SFFKPQVGNFERNFSVNLYKVTGQF-PWSSLRETDRGVSAEINFPIWKTS-HTLKWEGVW 262

Query: 292 RTITDPSQMASNSIRRQLGNSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDH 351
           R +   ++ AS +IR + G++L SSL +T  +D RN+++ P RG       ++ G     
Sbjct: 263 RELGCLARTASFAIREESGHTLKSSLSHTMVIDSRNASILPKRGALLKINQELAGYTGG- 322

Query: 352 RSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSP 411
             + F++++F+L+      +D + ++  +  G+++P G    ++PSS+ +RF+L      
Sbjct: 323 -DVSFLKEDFELQLNKQLAWD-SVLSTSLWGGMLVPVG----DRPSSIADRFYL------ 382

Query: 412 VCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDL 471
               GGPT+V GF    +GP         +++G        D++GG+        L   L
Sbjct: 383 ----GGPTSVRGFSMYSIGP---------QSEG--------DYLGGEAYWAGGVHLYTPL 442

Query: 472 PLRWLREHGIHG-----HIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPT-R 531
           P R  R  G  G     H F  AGNL  L   E      Q+  E  R S G G+V+    
Sbjct: 443 PFRPGR--GGFGDLFRTHFFLNAGNLCNLNYGEGPRAHLQRLAECIRWSYGAGLVLRLGN 461

Query: 532 LFRLEGNFYYILKQQEHDRGKTGFRF 542
           + RLE N+   +  Q  DR   G +F
Sbjct: 503 IARLELNYCIPMGVQSGDRICDGVQF 461

[Close]

BLAST of Cp4.1LG13g10400 vs. NCBI nr
Match: XP_023550898.1 (sorting and assembly machinery component 50 homolog B-like [Cucurbita pepo subsp. pepo] >XP_023550899.1 sorting and assembly machinery component 50 homolog B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1062 bits (2747), Expect = 0.0
Identity = 547/547 (100.00%), Postives = 547/547 (100.00%), Query Frame = 0


Query: 1   MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE 60
           MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE
Sbjct: 1   MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE 60

Query: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120
           PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK
Sbjct: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120

Query: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180
           NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC
Sbjct: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180

Query: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240
           GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV
Sbjct: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240

Query: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300
           ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG
Sbjct: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300

Query: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360
           NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG
Sbjct: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360

Query: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420
           FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG
Sbjct: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420

Query: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480
           PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG
Sbjct: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480

Query: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540
           NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540

Query: 541 FSISAPS 547
           FSISAPS
Sbjct: 541 FSISAPS 547

[Close]

BLAST of Cp4.1LG13g10400 vs. NCBI nr
Match: KAG6578810.1 (Sorting and assembly machinery component 50-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1052 bits (2720), Expect = 0.0
Identity = 543/547 (99.27%), Postives = 544/547 (99.45%), Query Frame = 0


Query: 1   MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE 60
           ME SEEVGKNTIRTSSEEEEEE VEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE
Sbjct: 1   MENSEEVGKNTIRTSSEEEEEE-VEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE 60

Query: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120
           PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHD+LIKGNSKTKDSLIEAEVEAIK
Sbjct: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDVLIKGNSKTKDSLIEAEVEAIK 120

Query: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180
           NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC
Sbjct: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180

Query: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240
           GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV
Sbjct: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240

Query: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300
           ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG
Sbjct: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300

Query: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360
           NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG
Sbjct: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360

Query: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420
           FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG
Sbjct: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420

Query: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480
           PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG
Sbjct: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480

Query: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540
           NLAKLTENEFRSFSFQKF ETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 481 NLAKLTENEFRSFSFQKFRETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540

Query: 541 FSISAPS 547
           FSISAPS
Sbjct: 541 FSISAPS 546

[Close]

BLAST of Cp4.1LG13g10400 vs. NCBI nr
Match: XP_022993263.1 (sorting and assembly machinery component 50 homolog B-like [Cucurbita maxima] >XP_022993264.1 sorting and assembly machinery component 50 homolog B-like [Cucurbita maxima])

HSP 1 Score: 1048 bits (2711), Expect = 0.0
Identity = 541/547 (98.90%), Postives = 544/547 (99.45%), Query Frame = 0


Query: 1   MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE 60
           ME SEEVG+NTIRTSSEEEEEE VEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDD+EE
Sbjct: 1   MESSEEVGENTIRTSSEEEEEE-VEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDDEE 60

Query: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120
           PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK
Sbjct: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120

Query: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180
           NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVE GNPLSGEC
Sbjct: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVEAGNPLSGEC 180

Query: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240
           GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV
Sbjct: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240

Query: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300
           ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG
Sbjct: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300

Query: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360
           NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG
Sbjct: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360

Query: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420
           FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG
Sbjct: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420

Query: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480
           PTEPRREVRDENKG+DNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG
Sbjct: 421 PTEPRREVRDENKGKDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480

Query: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540
           NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540

Query: 541 FSISAPS 547
           FSISAPS
Sbjct: 541 FSISAPS 546

[Close]

BLAST of Cp4.1LG13g10400 vs. NCBI nr
Match: XP_022939424.1 (sorting and assembly machinery component 50 homolog B-like [Cucurbita moschata] >XP_022939425.1 sorting and assembly machinery component 50 homolog B-like [Cucurbita moschata])

HSP 1 Score: 1047 bits (2708), Expect = 0.0
Identity = 542/547 (99.09%), Postives = 542/547 (99.09%), Query Frame = 0


Query: 1   MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE 60
           ME SEEVGKNTIRTSSEEEEEE VEREPSNFENGD EDEEVEDEEEDEEDEDDEDDDEEE
Sbjct: 1   MENSEEVGKNTIRTSSEEEEEE-VEREPSNFENGDEEDEEVEDEEEDEEDEDDEDDDEEE 60

Query: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120
           PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK
Sbjct: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120

Query: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180
           NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVE GNPLSGEC
Sbjct: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVEAGNPLSGEC 180

Query: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240
           GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV
Sbjct: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240

Query: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300
           ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG
Sbjct: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300

Query: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360
           NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG
Sbjct: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360

Query: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420
           FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG
Sbjct: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420

Query: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480
           PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG
Sbjct: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480

Query: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540
           NLAKLTENEFRSFSFQKF ETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 481 NLAKLTENEFRSFSFQKFRETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540

Query: 541 FSISAPS 547
           FSISAPS
Sbjct: 541 FSISAPS 546

[Close]

BLAST of Cp4.1LG13g10400 vs. NCBI nr
Match: XP_038885406.1 (sorting and assembly machinery component 50 homolog [Benincasa hispida] >XP_038885407.1 sorting and assembly machinery component 50 homolog [Benincasa hispida])

HSP 1 Score: 992 bits (2564), Expect = 0.0
Identity = 513/551 (93.10%), Postives = 529/551 (96.01%), Query Frame = 0


Query: 1   MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEE----VEDEEEDEEDEDDEDD 60
           M  SEEVG ++I  +SEEE+    EREPSNFENGDGEDE+    VEDEEEDEEDEDD D 
Sbjct: 1   MANSEEVGTSSIGLNSEEEQ---AEREPSNFENGDGEDEDGDEDVEDEEEDEEDEDDND- 60

Query: 61  DEEEPPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEV 120
             EE PRRKPI DASRL+AQRSKLENLVERMRKEKVRLRVHDILIKGN+KTKDSLIEAEV
Sbjct: 61  --EELPRRKPISDASRLLAQRSKLENLVERMRKEKVRLRVHDILIKGNTKTKDSLIEAEV 120

Query: 121 EAIKNASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPL 180
           EAIKNASTMQELLEAAGVANA LQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPL
Sbjct: 121 EAIKNASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPL 180

Query: 181 SGECGAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLM 240
           SGECGAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVY PRLKRL+
Sbjct: 181 SGECGAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYFPRLKRLV 240

Query: 241 TPLVARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIR 300
           TPLVARLSLLSQDW+EFSSYKERSLGLSLGLYSTKYHDLGYNLGWRT+TDPSQMASNS+R
Sbjct: 241 TPLVARLSLLSQDWLEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTLTDPSQMASNSVR 300

Query: 301 RQLGNSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYA 360
           RQLGNSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYA
Sbjct: 301 RQLGNSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYA 360

Query: 361 IPFGFDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKT 420
           IPFGFDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKT
Sbjct: 361 IPFGFDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKT 420

Query: 421 RGMGPTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIF 480
           RGMGPTEPRREVRDENKGE++D+LGRDFVGGDLAVTAFADLSFDLP+RWLREHGIHGHIF
Sbjct: 421 RGMGPTEPRREVRDENKGENDDSLGRDFVGGDLAVTAFADLSFDLPIRWLREHGIHGHIF 480

Query: 481 AGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGK 540
           AGAGNLAKLTENEFRSFSFQKFMETFRTSVG GIVVPTRLFRLEGNFYYILKQQ+HDRGK
Sbjct: 481 AGAGNLAKLTENEFRSFSFQKFMETFRTSVGAGIVVPTRLFRLEGNFYYILKQQQHDRGK 540

Query: 541 TGFRFSISAPS 547
           TGFRFSISAPS
Sbjct: 541 TGFRFSISAPS 545

[Close]

BLAST of Cp4.1LG13g10400 vs. ExPASy TrEMBL
Match: A0A6J1K1Q1 (sorting and assembly machinery component 50 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111489331 PE=4 SV=1)

HSP 1 Score: 1048 bits (2711), Expect = 0.0
Identity = 541/547 (98.90%), Postives = 544/547 (99.45%), Query Frame = 0


Query: 1   MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE 60
           ME SEEVG+NTIRTSSEEEEEE VEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDD+EE
Sbjct: 1   MESSEEVGENTIRTSSEEEEEE-VEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDDEE 60

Query: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120
           PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK
Sbjct: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120

Query: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180
           NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVE GNPLSGEC
Sbjct: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVEAGNPLSGEC 180

Query: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240
           GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV
Sbjct: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240

Query: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300
           ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG
Sbjct: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300

Query: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360
           NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG
Sbjct: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360

Query: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420
           FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG
Sbjct: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420

Query: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480
           PTEPRREVRDENKG+DNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG
Sbjct: 421 PTEPRREVRDENKGKDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480

Query: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540
           NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540

Query: 541 FSISAPS 547
           FSISAPS
Sbjct: 541 FSISAPS 546

[Close]

BLAST of Cp4.1LG13g10400 vs. ExPASy TrEMBL
Match: A0A6J1FH45 (sorting and assembly machinery component 50 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111445341 PE=4 SV=1)

HSP 1 Score: 1047 bits (2708), Expect = 0.0
Identity = 542/547 (99.09%), Postives = 542/547 (99.09%), Query Frame = 0


Query: 1   MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE 60
           ME SEEVGKNTIRTSSEEEEEE VEREPSNFENGD EDEEVEDEEEDEEDEDDEDDDEEE
Sbjct: 1   MENSEEVGKNTIRTSSEEEEEE-VEREPSNFENGDEEDEEVEDEEEDEEDEDDEDDDEEE 60

Query: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120
           PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK
Sbjct: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120

Query: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180
           NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVE GNPLSGEC
Sbjct: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVEAGNPLSGEC 180

Query: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240
           GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV
Sbjct: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240

Query: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300
           ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG
Sbjct: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300

Query: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360
           NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG
Sbjct: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360

Query: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420
           FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG
Sbjct: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420

Query: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480
           PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG
Sbjct: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480

Query: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540
           NLAKLTENEFRSFSFQKF ETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 481 NLAKLTENEFRSFSFQKFRETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540

Query: 541 FSISAPS 547
           FSISAPS
Sbjct: 541 FSISAPS 546

[Close]

BLAST of Cp4.1LG13g10400 vs. ExPASy TrEMBL
Match: A0A5A7T0T1 (Sorting and assembly machinery component 50-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00380 PE=4 SV=1)

HSP 1 Score: 989 bits (2557), Expect = 0.0
Identity = 507/547 (92.69%), Postives = 524/547 (95.80%), Query Frame = 0


Query: 1   MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE 60
           M  SEEVGK++I        EEEVER+PSNFENGDGEDE+VEDEEEDEE ED  D   EE
Sbjct: 1   MANSEEVGKSSI--------EEEVERDPSNFENGDGEDEDVEDEEEDEEYEDGND---EE 60

Query: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120
           PP+ KP+ DASRL+AQRSKLENLVERMRKEKVRLRVHDILIKGN+KTKDSLIEAEVEAIK
Sbjct: 61  PPQEKPVTDASRLLAQRSKLENLVERMRKEKVRLRVHDILIKGNTKTKDSLIEAEVEAIK 120

Query: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180
           NASTMQELLEAAGVANA LQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC
Sbjct: 121 NASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180

Query: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240
           GAYTKPAARSWTFEGS+KYKNWLGYGDLWDGSLAYGPNQTSEVSAGVY PRLKRL+TPLV
Sbjct: 181 GAYTKPAARSWTFEGSLKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYFPRLKRLVTPLV 240

Query: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300
           ARLSLLSQDW+EFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNS+RRQLG
Sbjct: 241 ARLSLLSQDWLEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSVRRQLG 300

Query: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360
           NSLLSSLKYTFKVDKRNSAVRPT GYAFVSTSQ+GGLAPDHRSLRFVRQEFDLRYAIPFG
Sbjct: 301 NSLLSSLKYTFKVDKRNSAVRPTSGYAFVSTSQVGGLAPDHRSLRFVRQEFDLRYAIPFG 360

Query: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420
           FDRAAMNFGVSAGVV PWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG
Sbjct: 361 FDRAAMNFGVSAGVVFPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420

Query: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480
           PTEPRREVRDENK E+ND+LGRDFVGGDLAVTAFADLSFDLP+RWLREHGIHGHIFAGAG
Sbjct: 421 PTEPRREVRDENKDENNDSLGRDFVGGDLAVTAFADLSFDLPIRWLREHGIHGHIFAGAG 480

Query: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540
           NLAKLTENEFRSFSFQKFMETFRTSVGVG+VVPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGVVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 536

Query: 541 FSISAPS 547
           FSISAPS
Sbjct: 541 FSISAPS 536

[Close]

BLAST of Cp4.1LG13g10400 vs. ExPASy TrEMBL
Match: A0A1S3C310 (LOW QUALITY PROTEIN: sorting and assembly machinery component 50 homolog OS=Cucumis melo OX=3656 GN=LOC103496447 PE=4 SV=1)

HSP 1 Score: 987 bits (2552), Expect = 0.0
Identity = 506/547 (92.50%), Postives = 523/547 (95.61%), Query Frame = 0


Query: 1   MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE 60
           M  SEEVGK++I        EEEVER+PSNFENGDGEDE+VEDEEEDEE ED  D   EE
Sbjct: 1   MANSEEVGKSSI--------EEEVERDPSNFENGDGEDEDVEDEEEDEEYEDGND---EE 60

Query: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120
           PP+ KP+ DASRL+AQRSKLENLVERMRKEKVRLRVHDILIKGN+KTKDSLIEAEVEAIK
Sbjct: 61  PPQEKPVTDASRLLAQRSKLENLVERMRKEKVRLRVHDILIKGNTKTKDSLIEAEVEAIK 120

Query: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180
           NASTMQELLEAAGVANA LQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC
Sbjct: 121 NASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180

Query: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240
           GAYTKPAARSWTFEGS+KYKNWLGYGDLWDGSLAYGPNQTSEVSAGVY PRLKRL+TPLV
Sbjct: 181 GAYTKPAARSWTFEGSLKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYFPRLKRLVTPLV 240

Query: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300
           ARLSLLSQDW+EFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNS+RRQLG
Sbjct: 241 ARLSLLSQDWLEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSVRRQLG 300

Query: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360
           NSLLSSLKYTFKVDKRNSAVRPT GYAFVSTSQ+GGLAPDHRSLRFVRQEFDLRYAIPFG
Sbjct: 301 NSLLSSLKYTFKVDKRNSAVRPTSGYAFVSTSQVGGLAPDHRSLRFVRQEFDLRYAIPFG 360

Query: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420
           FDRAAMNFGVSAGV  PWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG
Sbjct: 361 FDRAAMNFGVSAGVXFPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420

Query: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480
           PTEPRREVRDENK E+ND+LGRDFVGGDLAVTAFADLSFDLP+RWLREHGIHGHIFAGAG
Sbjct: 421 PTEPRREVRDENKDENNDSLGRDFVGGDLAVTAFADLSFDLPIRWLREHGIHGHIFAGAG 480

Query: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540
           NLAKLTENEFRSFSFQKFMETFRTSVGVG+VVPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGVVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 536

Query: 541 FSISAPS 547
           FSISAPS
Sbjct: 541 FSISAPS 536

[Close]

BLAST of Cp4.1LG13g10400 vs. ExPASy TrEMBL
Match: A0A0A0KE64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406550 PE=4 SV=1)

HSP 1 Score: 985 bits (2546), Expect = 0.0
Identity = 505/547 (92.32%), Postives = 524/547 (95.80%), Query Frame = 0


Query: 1   MEKSEEVGKNTIRTSSEEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEE 60
           M  SEEVGK++I        EEEVEREPSNFENGDGEDE+VED   DEEDE+ ED ++EE
Sbjct: 1   MANSEEVGKSSI--------EEEVEREPSNFENGDGEDEDVED---DEEDEEYEDGNDEE 60

Query: 61  PPRRKPILDASRLIAQRSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIK 120
            P+ KP+ DASRL+AQRSKLENLVERMRKEKVRLRVHDILIKGN+KTKDSLIEAEVEAIK
Sbjct: 61  LPQGKPVTDASRLLAQRSKLENLVERMRKEKVRLRVHDILIKGNTKTKDSLIEAEVEAIK 120

Query: 121 NASTMQELLEAAGVANANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180
            ASTMQELLEAAGVANA LQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC
Sbjct: 121 TASTMQELLEAAGVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGEC 180

Query: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLV 240
           GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVY PRLKRL+TPLV
Sbjct: 181 GAYTKPAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYFPRLKRLVTPLV 240

Query: 241 ARLSLLSQDWMEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLG 300
           ARLSLLSQDW+EFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNS+RRQLG
Sbjct: 241 ARLSLLSQDWLEFSSYKERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSVRRQLG 300

Query: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFG 360
           NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQ+GGLAPDHRSLRFVRQEFDLRYAIPFG
Sbjct: 301 NSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTSQVGGLAPDHRSLRFVRQEFDLRYAIPFG 360

Query: 361 FDRAAMNFGVSAGVVLPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420
           FDRAAMNFGVSAGVV PWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG
Sbjct: 361 FDRAAMNFGVSAGVVFPWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMG 420

Query: 421 PTEPRREVRDENKGEDNDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAG 480
           PTEPRREVRDENK ++ND+LGRDFVGGDLAVTAFADLSFDLP+RWLREHGIHGHIFAGAG
Sbjct: 421 PTEPRREVRDENKDDNNDSLGRDFVGGDLAVTAFADLSFDLPIRWLREHGIHGHIFAGAG 480

Query: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 540
           NLAKLTENEFRSFSFQKFMETFRTSVGVG+VVPTRLFRLEGNFYYILKQQEHDRGKTGFR
Sbjct: 481 NLAKLTENEFRSFSFQKFMETFRTSVGVGVVVPTRLFRLEGNFYYILKQQEHDRGKTGFR 536

Query: 541 FSISAPS 547
           FSISAPS
Sbjct: 541 FSISAPS 536

[Close]

BLAST of Cp4.1LG13g10400 vs. TAIR 10
Match: AT3G11070.1 (Outer membrane OMP85 family protein )

HSP 1 Score: 634.8 bits (1636), Expect = 6.4e-182
Identity = 328/531 (61.77%), Postives = 412/531 (77.59%), Query Frame = 0


Query: 17  EEEEEEEVEREPSNFENGDGEDEEVEDEEEDEEDEDDEDDDEEEPPRRKPILDASRLIAQ 76
           E E EEEVE E + +E  DG            ED+D EDDD E   + +     S     
Sbjct: 16  EPEAEEEVE-ELNGYEGDDG-----------GEDDDGEDDDTESKSQTR----ESGSSVD 75

Query: 77  RSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIKNASTMQELLEAAGVAN 136
           R K E+L  RMR   V +RVHD++I GN KTKD +IEAEV+A++ A+T+QELLEA+ VAN
Sbjct: 76  RIKAESLFRRMRAAPVPVRVHDVIIGGNEKTKDHIIEAEVDAVREATTLQELLEASRVAN 135

Query: 137 ANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPAARSWTFEGS 196
           +NL+ L+IFDSV ITLDSGPPELPGT NVVI+VVE+ +PL+G+ GAYT+  ARS + E S
Sbjct: 136 SNLRALDIFDSVNITLDSGPPELPGTTNVVIDVVESKSPLTGQIGAYTRAEARSSSVEAS 195

Query: 197 VKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLVARLSLLSQDWMEFSSY 256
           +KYKN  GYGD+WDGS+ YG + ++EV  G+YLPR + L TP  +RL L +QDW++FSSY
Sbjct: 196 LKYKNIFGYGDIWDGSIVYGCDNSAEVGLGMYLPRFRGLSTPFTSRLFLSTQDWLKFSSY 255

Query: 257 KERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLGNSLLSSLKYTFKVDKR 316
           KERSLGLSLGL+S+KYH+L Y + WR + DPSQ A+ SIRRQLG+SLLS+LKYTF+ D+R
Sbjct: 256 KERSLGLSLGLFSSKYHELIYTIAWRNLIDPSQAAAVSIRRQLGHSLLSALKYTFRFDQR 315

Query: 317 NSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVL 376
           NS++RPT GYAF+STSQIGGLAPD RSLRF++QE DLRYA+PFGF  AA+NFGVS GV  
Sbjct: 316 NSSLRPTNGYAFISTSQIGGLAPDSRSLRFLKQEVDLRYAVPFGFYNAAINFGVSGGVSF 375

Query: 377 PWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGED 436
           PWG+G+ N+PSS+PERFFLGG+ SPVC++ GP+ +WGFKTRG+GP+EP+R      KG+ 
Sbjct: 376 PWGSGYQNRPSSIPERFFLGGNSSPVCSLSGPSALWGFKTRGVGPSEPKR------KGDS 435

Query: 437 NDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQ 496
                RDFVGGD AVTAFADLSFDLP+RWLRE GIHGH+FA AGN+AKL+ENEFR+F+  
Sbjct: 436 E----RDFVGGDAAVTAFADLSFDLPVRWLRERGIHGHVFACAGNMAKLSENEFRNFTAP 495

Query: 497 KFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFRFSISAPS 548
           KF+ETFRTSVG GIV+PT LFR+E N+ +ILK+QEHD+ ++G   + SA S
Sbjct: 496 KFLETFRTSVGAGIVLPTSLFRMELNYCHILKKQEHDQARSGVFLTFSASS 520

[Close]

BLAST of Cp4.1LG13g10400 vs. TAIR 10
Match: AT5G05520.1 (Outer membrane OMP85 family protein )

HSP 1 Score: 632.9 bits (1631), Expect = 2.4e-181
Identity = 319/531 (60.08%), Postives = 421/531 (79.28%), Query Frame = 0


Query: 18  EEEEEEVEREPSNFE-NGDGEDEEVEDEEEDEEDEDDEDDDEEEPPRRKPILDASRLIAQ 77
           E   E+ +  PS  +   + E EE+ D   DEE+E++ +++++  PR +   DA   IA 
Sbjct: 2   ENPAEKPDPNPSKPKIESEDEREELGDINGDEEEEEEYEEEDDGKPRTRE--DA---IAD 61

Query: 78  RSKLENLVERMRKEKVRLRVHDILIKGNSKTKDSLIEAEVEAIKNASTMQELLEAAGVAN 137
           R K E+L  RMR   V +RVHD+++KGN KTKD +IEAEV+ ++ A+T+QELL+A+ VAN
Sbjct: 62  RIKAESLFRRMRATPVAVRVHDVIVKGNEKTKDHVIEAEVDVVRQATTLQELLKASKVAN 121

Query: 138 ANLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETGNPLSGECGAYTKPAARSWTFEGS 197
            NLQ L+IFDSVKITLDSGPPELPGT NVVI+VVE+ +P++G+ G +TK  ARS + EGS
Sbjct: 122 FNLQALDIFDSVKITLDSGPPELPGTTNVVIDVVESKSPITGQIGTFTKAEARSSSLEGS 181

Query: 198 VKYKNWLGYGDLWDGSLAYGPNQTSEVSAGVYLPRLKRLMTPLVARLSLLSQDWMEFSSY 257
           +KYKN  GYGD+WDGSLAYG + ++EV  G+YLPR +   TP  +R+ L +QDW++FSSY
Sbjct: 182 LKYKNIFGYGDIWDGSLAYGCDHSAEVGLGMYLPRFRGRPTPFTSRVYLSTQDWLKFSSY 241

Query: 258 KERSLGLSLGLYSTKYHDLGYNLGWRTITDPSQMASNSIRRQLGNSLLSSLKYTFKVDKR 317
           KER+LGLSLGL ++KYH+L YN+ WR + DPSQMAS SIRRQLG++L+S+LKYTFK D+R
Sbjct: 242 KERALGLSLGLIASKYHELAYNIAWRNLIDPSQMASRSIRRQLGHNLVSALKYTFKFDQR 301

Query: 318 NSAVRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVL 377
           NS++RPTRGY+F+STSQIGGLAPD R+LRF+RQE DLRYA+P GF RAA+NFG++ G+  
Sbjct: 302 NSSLRPTRGYSFISTSQIGGLAPDSRTLRFLRQEIDLRYAVPLGFYRAALNFGIAGGITF 361

Query: 378 PWGNGFLNKPSSLPERFFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKGED 437
           PWG+G+ ++ S +PERFFLGG+ SPVC++GGP+ +WGFKTRG+GP EPRREV+D+  G  
Sbjct: 362 PWGSGYKSRASCVPERFFLGGNISPVCSLGGPSALWGFKTRGLGPNEPRREVQDDESG-- 421

Query: 438 NDALGRDFVGGDLAVTAFADLSFDLPLRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQ 497
            D   RDFVGGD+AVTAFADLSFD PL+W R+ GIHGH+FA AGN+A+L+EN++R+F+  
Sbjct: 422 -DTYERDFVGGDVAVTAFADLSFDFPLKWFRDRGIHGHVFACAGNMAELSENKYRNFTAP 481

Query: 498 KFMETFRTSVGVGIVVPTRLFRLEGNFYYILKQQEHDRGKTGFRFSISAPS 548
           K +ETFR+SVG GIVVPT LFR+E N+ +ILK+QEHDR K+GF  + S  S
Sbjct: 482 KLLETFRSSVGAGIVVPTSLFRMELNYCHILKKQEHDRAKSGFFMTFSTSS 524

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g10400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8BGH2	7.2e-29	27.49	Sorting and assembly machinery component 50 homolog OS=Mus musculus OX=10090 GN=...	[more]
Q9Y512	1.4e-27	27.27	Sorting and assembly machinery component 50 homolog OS=Homo sapiens OX=9606 GN=S...	[more]
Q5U3I0	4.0e-27	26.90	Sorting and assembly machinery component 50 homolog B OS=Danio rerio OX=7955 GN=...	[more]
Q2HJ55	1.2e-26	26.90	Sorting and assembly machinery component 50 homolog OS=Bos taurus OX=9913 GN=SAM...	[more]
Q6PA35	1.2e-26	26.09	Sorting and assembly machinery component 50 homolog B OS=Xenopus laevis OX=8355 ...	[more]

BLAST of Cp4.1LG13g10400 vs. NCBI nr


Match Name	Identity	Description
XP_023550898.1	100.00	sorting and assembly machinery component 50 homolog B-like [Cucurbita pepo subsp...	[more]
KAG6578810.1	99.27	Sorting and assembly machinery component 50-like protein, partial [Cucurbita arg...	[more]
XP_022993263.1	98.90	sorting and assembly machinery component 50 homolog B-like [Cucurbita maxima] >X...	[more]
XP_022939424.1	99.09	sorting and assembly machinery component 50 homolog B-like [Cucurbita moschata] ...	[more]
XP_038885406.1	93.10	sorting and assembly machinery component 50 homolog [Benincasa hispida] >XP_0388...	[more]

BLAST of Cp4.1LG13g10400 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1K1Q1	98.90	sorting and assembly machinery component 50 homolog B-like OS=Cucurbita maxima O...	[more]
A0A6J1FH45	99.09	sorting and assembly machinery component 50 homolog B-like OS=Cucurbita moschata...	[more]
A0A5A7T0T1	92.69	Sorting and assembly machinery component 50-like protein OS=Cucumis melo var. ma...	[more]
A0A1S3C310	92.50	LOW QUALITY PROTEIN: sorting and assembly machinery component 50 homolog OS=Cucu...	[more]
A0A0A0KE64	92.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406550 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g10400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11070.1	6.4e-182	61.77	Outer membrane OMP85 family protein	[more]
AT5G05520.1	2.4e-181	60.08	Outer membrane OMP85 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 70..97
None	No IPR available	GENE3D	2.40.160.50	membrane protein fhac: a member of the omp85/tpsb transporter family	coord: 185..546 e-value: 5.9E-43 score: 149.6
None	No IPR available	GENE3D	3.10.20.310	membrane protein fhac	coord: 92..172 e-value: 3.0E-8 score: 35.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..438
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 420..438
None	No IPR available	PANTHER	PTHR12815:SF38	OUTER MEMBRANE OMP85 FAMILY PROTEIN	coord: 26..542
IPR010827	POTRA domain, BamA/TamA-like	PFAM	PF07244	POTRA	coord: 95..171 e-value: 1.7E-5 score: 25.3
IPR000184	Bacterial surface antigen (D15)	PFAM	PF01103	Omp85	coord: 201..544 e-value: 5.8E-30 score: 104.9
IPR039910	Surface antigen D15-like	PANTHER	PTHR12815	SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER	coord: 26..542

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g10400.1	Cp4.1LG13g10400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045040	protein insertion into mitochondrial outer membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009527	plastid outer membrane
cellular_component	GO:0001401	SAM complex
cellular_component	GO:0019867	outer membrane