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Cp4.1LG13g10380 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCCAAATGGTTTTAGTGAACCAAATTCTGAGCTTCTTGGTCGGTGTAATTTATCCTCTTCCTCCTCATCCATTGGCGGAGGCGGCGGCGGAGGCGGCGGAGGCGGCGGCGAGGATGAGCAGGAGGATGTGGCGAAGTGCCTCATCCTTCTTTCTCAAGGCCTACCAGCTTCTCAACCGTCCTCTTCGATGGTAAAATTCATCGAAGACCCACAAGGTCAAAATGGTAATTATAACATATATATTTATTTATTTATTTTAAATAAGAATTTAAAATTAAAAAAATAATAATGAGTATGTATTTAAATTGTAGGCGCGGGCAAGGCAACAGAGTGTTACGCATACGAGTGCAAAACCTGCAGCCGAACCTTCCCATCATTTCGAGCCCTAGCCATGACCGCCGGCGACAAGAAATCGATCTCCGGCACATCGCCGGCCTACAAACATCAACAACAGCGATTCAACAACACCATTTCAAGCCCTTTCGATCCGCTTCGTATGAACGAACCGGTTATTATCACAAGACGCACGAGTGCTCCGTCTGTGACTCCGAGTTCACTTCCGTCCAGGTCCTCAGCGGCCACATGTGCCGCCACCGCCGTGGCTGCGGCAGAGATTCCGGCGAAATTGCTCATCGTCGTCCTAAGAGGCATAGAAGTAATTTGTTGTGTTTGGAGTTGGATCTCAATCATCCAACCACCGAAGAGAATAAAAGAGATCAATCCGGCGTCGTTTCAATGGCCGCCATGGATCTGGTAA ATGAATCCAAATGGTTTTAGTGAACCAAATTCTGAGCTTCTTGGTCGGTGTAATTTATCCTCTTCCTCCTCATCCATTGGCGGAGGCGGCGGCGGAGGCGGCGGAGGCGGCGGCGAGGATGAGCAGGAGGATGTGGCGAAGTGCCTCATCCTTCTTTCTCAAGGCCTACCAGCTTCTCAACCGTCCTCTTCGATGGTAAAATTCATCGAAGACCCACAAGGTCAAAATGGCGCGGGCAAGGCAACAGAGTGTTACGCATACGAGTGCAAAACCTGCAGCCGAACCTTCCCATCATTTCGAGCCCTAGCCATGACCGCCGGCGACAAGAAATCGATCTCCGGCACATCGCCGGCCTACAAACATCAACAACAGCGATTCAACAACACCATTTCAAGCCCTTTCGATCCGCTTCGTATGAACGAACCGGTTATTATCACAAGACGCACGAGTGCTCCGTCTGTGACTCCGAGTTCACTTCCGTCCAGGTCCTCAGCGGCCACATGTGCCGCCACCGCCGTGGCTGCGGCAGAGATTCCGGCGAAATTGCTCATCGTCGTCCTAAGAGGCATAGAAGTAATTTGTTGTGTTTGGAGTTGGATCTCAATCATCCAACCACCGAAGAGAATAAAAGAGATCAATCCGGCGTCGTTTCAATGGCCGCCATGGATCTGGTAA ATGAATCCAAATGGTTTTAGTGAACCAAATTCTGAGCTTCTTGGTCGGTGTAATTTATCCTCTTCCTCCTCATCCATTGGCGGAGGCGGCGGCGGAGGCGGCGGAGGCGGCGGCGAGGATGAGCAGGAGGATGTGGCGAAGTGCCTCATCCTTCTTTCTCAAGGCCTACCAGCTTCTCAACCGTCCTCTTCGATGGTAAAATTCATCGAAGACCCACAAGGTCAAAATGGCGCGGGCAAGGCAACAGAGTGTTACGCATACGAGTGCAAAACCTGCAGCCGAACCTTCCCATCATTTCGAGCCCTAGCCATGACCGCCGGCGACAAGAAATCGATCTCCGGCACATCGCCGGCCTACAAACATCAACAACAGCGATTCAACAACACCATTTCAAGCCCTTTCGATCCGCTTCGTATGAACGAACCGGTTATTATCACAAGACGCACGAGTGCTCCGTCTGTGACTCCGAGTTCACTTCCGTCCAGGTCCTCAGCGGCCACATGTGCCGCCACCGCCGTGGCTGCGGCAGAGATTCCGGCGAAATTGCTCATCGTCGTCCTAAGAGGCATAGAAGTAATTTGTTGTGTTTGGAGTTGGATCTCAATCATCCAACCACCGAAGAGAATAAAAGAGATCAATCCGGCGTCGTTTCAATGGCCGCCATGGATCTGGTAA MNPNGFSEPNSELLGRCNLSSSSSSIGGGGGGGGGGGGEDEQEDVAKCLILLSQGLPASQPSSSMVKFIEDPQGQNGAGKATECYAYECKTCSRTFPSFRALAMTAGDKKSISGTSPAYKHQQQRFNNTISSPFDPLRMNEPVIITRRTSAPSVTPSSLPSRSSAATCAATAVAAAEIPAKLLIVVLRGIEVICCVWSWISIIQPPKRIKEINPASFQWPPWIW Homology
BLAST of Cp4.1LG13g10380 vs. NCBI nr
Match: XP_022939503.1 (zinc finger protein ZAT5-like [Cucurbita moschata]) HSP 1 Score: 257 bits (656), Expect = 9.77e-83 Identity = 134/150 (89.33%), Postives = 135/150 (90.00%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. NCBI nr
Match: KAG7016322.1 (Zinc finger protein ZAT5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 257 bits (656), Expect = 9.77e-83 Identity = 134/150 (89.33%), Postives = 135/150 (90.00%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. NCBI nr
Match: KAG6578792.1 (Zinc finger protein ZAT5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 254 bits (649), Expect = 6.04e-82 Identity = 133/150 (88.67%), Postives = 134/150 (89.33%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. NCBI nr
Match: XP_022992979.1 (zinc finger protein ZAT5-like [Cucurbita maxima]) HSP 1 Score: 201 bits (512), Expect = 2.13e-61 Identity = 115/151 (76.16%), Postives = 117/151 (77.48%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. NCBI nr
Match: XP_038885865.1 (zinc finger protein ZAT5-like [Benincasa hispida]) HSP 1 Score: 148 bits (374), Expect = 1.31e-39 Identity = 94/157 (59.87%), Postives = 106/157 (67.52%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. ExPASy TrEMBL
Match: A0A6J1FLT9 (zinc finger protein ZAT5-like OS=Cucurbita moschata OX=3662 GN=LOC111445388 PE=4 SV=1) HSP 1 Score: 257 bits (656), Expect = 4.73e-83 Identity = 134/150 (89.33%), Postives = 135/150 (90.00%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. ExPASy TrEMBL
Match: A0A6J1JYY6 (zinc finger protein ZAT5-like OS=Cucurbita maxima OX=3661 GN=LOC111489144 PE=4 SV=1) HSP 1 Score: 201 bits (512), Expect = 1.03e-61 Identity = 115/151 (76.16%), Postives = 117/151 (77.48%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. ExPASy TrEMBL
Match: A0A1S3C335 (zinc finger protein ZAT5-like OS=Cucumis melo OX=3656 GN=LOC103496465 PE=4 SV=1) HSP 1 Score: 117 bits (294), Expect = 1.66e-28 Identity = 84/165 (50.91%), Postives = 102/165 (61.82%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. ExPASy TrEMBL
Match: A0A0A0LQC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326490 PE=4 SV=1) HSP 1 Score: 102 bits (253), Expect = 7.73e-23 Identity = 75/160 (46.88%), Postives = 91/160 (56.88%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. ExPASy TrEMBL
Match: A0A5D3BNW6 (Zinc finger protein ZAT5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00060 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 7.11e-15 Identity = 68/151 (45.03%), Postives = 87/151 (57.62%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. TAIR 10
Match: AT3G10470.1 (C2H2-type zinc finger family protein ) HSP 1 Score: 49.7 bits (117), Expect = 3.6e-06 Identity = 48/166 (28.92%), Postives = 70/166 (42.17%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. TAIR 10
Match: AT5G04390.1 (C2H2-type zinc finger family protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.4e-05 Identity = 43/114 (37.72%), Postives = 57/114 (50.00%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. TAIR 10
Match: AT5G03510.1 (C2H2-type zinc finger family protein ) HSP 1 Score: 46.2 bits (108), Expect = 4.0e-05 Identity = 33/85 (38.82%), Postives = 42/85 (49.41%), Query Frame = 0
BLAST of Cp4.1LG13g10380 vs. TAIR 10
Match: AT2G28200.1 (C2H2-type zinc finger family protein ) HSP 1 Score: 43.1 bits (100), Expect = 3.4e-04 Identity = 34/96 (35.42%), Postives = 47/96 (48.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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