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Cp4.1LG13g10330 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGTTCTATAAATAGCCCTTATTACTTGGACTGAGAAACCCATTACTCAGTGAAAAAGAATGAGAAAATAGGAGAGGAATGCCAACAATTTTCCTCTGTCAATAGCAAAAATCAACGGAGAAGCTCCTTTCTATCTTCTTCTTCATCAAATTCATCCGAATTGGTCACTGCAATTCAATTAATGGAGGCTGATTGCACATCTTTGAGCTGGGAATTCTGCACTCATCAAGATGTGGGTATCTCATTTGATTCTGTTTCTGTTGAAGTTTTGGATTTCTGGGTTTTGTTCTAAACTGATCCAAGTTTTTCAGGGAATGGAAGAGCTTAGGTATGCTCTTTTCTACACGAATTTGGAGCTTGAAACAACAATCATGTCAGCTAAGGAGGAGATTTCGAGGAGAGAATGTGAAATTATGAACTTGAGGGATCTTCTCGACAGAGCCATTAAAGAGAAAGATGAATTTGAAGCAAAATGTGGTAAGCTAATGTTGGAAAATTTGTTTCTGCTTGAACAGCACAAGAATCAGGAACTTGAAATCACTCCACAAAGTGATAGTGACTCTAGCAAGATCTTTGATTGTTCTGGTTCTGATGATAACGCAACTCAATCTCCACAAACTGACCCGATTGTGGGAGAGCCATTGTTATTAAAAGATCTCCCACCAACTGTTTGTAAAAATGCCTGTAAGAATGAGAAGCCATTGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCATTGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCATTGTTATCTCAAGAACACCCAACTGTTCGTAAAAATGCCTGTGAGAATGAGAAGCCATTGTTATCTCAAGAACACCCACCAACTGTTTGGAAAAATGCGTGTGAGAATAAGATGCCATTGTTATCTCAAGAACTCCCACCAACTGTTCATAAAAATGCCTGTGAGAACGAGAAGCCGTTGTTATCTCAAGAACCCCCCTCAAGTGTTTGGAAAAACGCCTGTGAGAAGCAATTGCCACAGAAAGGCAAGCTTCTACAGGCAGTGATTGAAGCTGGCCCCCTTCTCCAGAATCTCCTCCTTGCCGGGCCGCTGCCTCATTGGCAGCACCCGCCACTGCTCATCAACTCAAGCGACATCCCACCGGTGATCATCTCACCTCGCCCTTCACGGCCCCTAGCTCAAAGCTCTGCCATTGACATTAGAAAGAGAACCCATTCACATCTCTCTGAGGTCTCTCAACATTCCCAGAAGCATCAAAAAGTGGCCCAGTAATATTCCAAGTAACTCTGATCCCTCATTCTCTCTACTTCTTTTCAATACCCATCTACTGAATTACTGTCATCTTTTTTTCTTTGTGCTGTGACTGTGAGATGTATAATCTGGAGATTGTCTGTTCCATTCTCTTTCAAATCACAGTTACACCCAACAAAAAAACTGGGTGAATTCTCATTCACTTCGTTCCAAAAATCAAGTACAAAGCTCTTTGAACAAATTTTGTGATTCTACAAATGCCATTCATTTCCATTTTGTCTGAACAAGAATGACAGAACCACCACCCCGGCCTTGTTTATGGATCATCTTTCAGTTTTGTACTGTGAGATCCCATATCGGTTGGAGAGGAGAACGAATCATTTTTTATAAGTGTGTGAAAACCTCTCCCTAACATACGTGTTTTAAAAACCTCGAGGGATAGCCCAAAAATGACAATATCTATTAGTAGTGGGCTTAGGCCGTTATATATACCATATTACTTTTATCACTAATGATTTGCTGCTGAATGTTGATGCTTAAGAGTTCATTTTTGCGCACTTTTTGGCCAATATCTTAGGGCCCTTTTGCTGCTTTTGCTCTGTTTTAAGAGATGAAGTATGATTACTACATACAGGGGAAAGATAGATCTTCACAAAGATTCTGCTTTGTCTATGTAGAATTAGGAGATACCCACCATTCATAGTGGGTCTGCTGTGGCTTTAATTAGTGCAGCAATCTTTGTAGATTCCCCCTTCATTATCCAAGCATTCAAAGCTTGGCCTTTGTGCAAAAGGGGACACACTTAACCCACACCATTTGGATGGTTAAAGACACCAAAAGTTCATTCAAACTCAATGAAGTTCTTGAGATTTTATGTTGATGTTGGGAAGTTCTTGTTTTTCTCTCTCTATTTTTCTATGACCCAACGAGTTATGTTCTTACTGTTAACTGATTGATATTGACTAAGTGACGAGTATGTTTGATGAGAACTAAGGTTGATTAGATTGAATTCGACTATTTATGTGTTTTTTAAGTTTGGTTCGTTAAATATTTGATTTTT ATGATTGTTCTATAAATAGCCCTTATTACTTGGACTGAGAAACCCATTACTCAGTGAAAAAGAATGAGAAAATAGGAGAGGAATGCCAACAATTTTCCTCTGTCAATAGCAAAAATCAACGGAGAAGCTCCTTTCTATCTTCTTCTTCATCAAATTCATCCGAATTGGTCACTGCAATTCAATTAATGGAGGCTGATTGCACATCTTTGAGCTGGGAATTCTGCACTCATCAAGATGGAATGGAAGAGCTTAGGTATGCTCTTTTCTACACGAATTTGGAGCTTGAAACAACAATCATGTCAGCTAAGGAGGAGATTTCGAGGAGAGAATGTGAAATTATGAACTTGAGGGATCTTCTCGACAGAGCCATTAAAGAGAAAGATGAATTTGAAGCAAAATGTGGTAAGCTAATGTTGGAAAATTTGTTTCTGCTTGAACAGCACAAGAATCAGGAACTTGAAATCACTCCACAAAGTGATAGTGACTCTAGCAAGATCTTTGATTGTTCTGGTTCTGATGATAACGCAACTCAATCTCCACAAACTGACCCGATTGTGGGAGAGCCATTGTTATTAAAAGATCTCCCACCAACTGTTTGTAAAAATGCCTGTAAGAATGAGAAGCCATTGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCATTGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCATTGTTATCTCAAGAACACCCAACTGTTCGTAAAAATGCCTGTGAGAATGAGAAGCCATTGTTATCTCAAGAACACCCACCAACTGTTTGGAAAAATGCGTGTGAGAATAAGATGCCATTGTTATCTCAAGAACTCCCACCAACTGTTCATAAAAATGCCTGTGAGAACGAGAAGCCGTTGTTATCTCAAGAACCCCCCTCAAGTGTTTGGAAAAACGCCTGTGAGAAGCAATTGCCACAGAAAGGCAAGCTTCTACAGGCAGTGATTGAAGCTGGCCCCCTTCTCCAGAATCTCCTCCTTGCCGGGCCGCTGCCTCATTGGCAGCACCCGCCACTGCTCATCAACTCAAGCGACATCCCACCGGTGATCATCTCACCTCGCCCTTCACGGCCCCTAGCTCAAAGCTCTGCCATTGACATTAGAAAGAGAACCCATTCACATCTCTCTGAGGTCTCTCAACATTCCCAGAAGCATCAAAAAGTGGCCCAGTAATATTCCAAAATTAGGAGATACCCACCATTCATAGTGGGTCTGCTGTGGCTTTAATTAGTGCAGCAATCTTTGTAGATTCCCCCTTCATTATCCAAGCATTCAAAGCTTGGCCTTTGTGCAAAAGGGGACACACTTAACCCACACCATTTGGATGGTTAAAGACACCAAAAGTTCATTCAAACTCAATGAAGTTCTTGAGATTTTATGTTGATGTTGGGAAGTTCTTGTTTTTCTCTCTCTATTTTTCTATGACCCAACGAGTTATGTTCTTACTGTTAACTGATTGATATTGACTAAGTGACGAGTATGTTTGATGAGAACTAAGGTTGATTAGATTGAATTCGACTATTTATGTGTTTTTTAAGTTTGGTTCGTTAAATATTTGATTTTT ATGGAGGCTGATTGCACATCTTTGAGCTGGGAATTCTGCACTCATCAAGATGGAATGGAAGAGCTTAGGTATGCTCTTTTCTACACGAATTTGGAGCTTGAAACAACAATCATGTCAGCTAAGGAGGAGATTTCGAGGAGAGAATGTGAAATTATGAACTTGAGGGATCTTCTCGACAGAGCCATTAAAGAGAAAGATGAATTTGAAGCAAAATGTGGTAAGCTAATGTTGGAAAATTTGTTTCTGCTTGAACAGCACAAGAATCAGGAACTTGAAATCACTCCACAAAGTGATAGTGACTCTAGCAAGATCTTTGATTGTTCTGGTTCTGATGATAACGCAACTCAATCTCCACAAACTGACCCGATTGTGGGAGAGCCATTGTTATTAAAAGATCTCCCACCAACTGTTTGTAAAAATGCCTGTAAGAATGAGAAGCCATTGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCATTGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCAATGTTATCTCAAGAACTCCCACCAACTGTTTGTAAAAATGCCTGTGAGAATGAGAAGCCATTGTTATCTCAAGAACACCCAACTGTTCGTAAAAATGCCTGTGAGAATGAGAAGCCATTGTTATCTCAAGAACACCCACCAACTGTTTGGAAAAATGCGTGTGAGAATAAGATGCCATTGTTATCTCAAGAACTCCCACCAACTGTTCATAAAAATGCCTGTGAGAACGAGAAGCCGTTGTTATCTCAAGAACCCCCCTCAAGTGTTTGGAAAAACGCCTGTGAGAAGCAATTGCCACAGAAAGGCAAGCTTCTACAGGCAGTGATTGAAGCTGGCCCCCTTCTCCAGAATCTCCTCCTTGCCGGGCCGCTGCCTCATTGGCAGCACCCGCCACTGCTCATCAACTCAAGCGACATCCCACCGGTGATCATCTCACCTCGCCCTTCACGGCCCCTAGCTCAAAGCTCTGCCATTGACATTAGAAAGAGAACCCATTCACATCTCTCTGAGGTCTCTCAACATTCCCAGAAGCATCAAAAAGTGGCCCAGTAA MEADCTSLSWEFCTHQDGMEELRYALFYTNLELETTIMSAKEEISRRECEIMNLRDLLDRAIKEKDEFEAKCGKLMLENLFLLEQHKNQELEITPQSDSDSSKIFDCSGSDDNATQSPQTDPIVGEPLLLKDLPPTVCKNACKNEKPLLSQELPPTVCKNACENEKPMLSQELPPTVCKNACENEKPLLSQELPPTVCKNACENEKPMLSQELPPTVCKNACENEKPMLSQELPPTVCKNACENEKPMLSQELPPTVCKNACENEKPMLSQELPPTVCKNACENEKPMLSQELPPTVCKNACENEKPMLSQELPPTVCKNACENEKPMLSQELPPTVCKNACENEKPLLSQEHPTVRKNACENEKPLLSQEHPPTVWKNACENKMPLLSQELPPTVHKNACENEKPLLSQEPPSSVWKNACEKQLPQKGKLLQAVIEAGPLLQNLLLAGPLPHWQHPPLLINSSDIPPVIISPRPSRPLAQSSAIDIRKRTHSHLSEVSQHSQKHQKVAQ Homology
BLAST of Cp4.1LG13g10330 vs. NCBI nr
Match: XP_023550309.1 (uncharacterized protein LOC111808510 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 1023 bits (2646), Expect = 0.0 Identity = 510/510 (100.00%), Postives = 510/510 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. NCBI nr
Match: KAG6578793.1 (SHUGOSHIN 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 609 bits (1570), Expect = 1.34e-208 Identity = 337/510 (66.08%), Postives = 344/510 (67.45%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. NCBI nr
Match: KAG7016324.1 (hypothetical protein SDJN02_21431 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 565 bits (1457), Expect = 4.28e-198 Identity = 305/440 (69.32%), Postives = 311/440 (70.68%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. NCBI nr
Match: XP_038885538.1 (uncharacterized protein LOC120075878 isoform X1 [Benincasa hispida]) HSP 1 Score: 341 bits (874), Expect = 3.22e-111 Identity = 226/509 (44.40%), Postives = 242/509 (47.54%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. NCBI nr
Match: XP_038885539.1 (uncharacterized protein LOC120075878 isoform X2 [Benincasa hispida]) HSP 1 Score: 308 bits (789), Expect = 1.20e-98 Identity = 210/491 (42.77%), Postives = 225/491 (45.82%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. ExPASy TrEMBL
Match: A0A5D3BLC7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00070 PE=4 SV=1) HSP 1 Score: 295 bits (755), Expect = 6.80e-94 Identity = 210/510 (41.18%), Postives = 223/510 (43.73%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. ExPASy TrEMBL
Match: A0A1S3C4R8 (uncharacterized protein LOC103496464 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496464 PE=4 SV=1) HSP 1 Score: 295 bits (755), Expect = 6.80e-94 Identity = 210/510 (41.18%), Postives = 223/510 (43.73%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. ExPASy TrEMBL
Match: A0A0A0LJW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326480 PE=4 SV=1) HSP 1 Score: 289 bits (740), Expect = 1.22e-91 Identity = 206/510 (40.39%), Postives = 223/510 (43.73%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. ExPASy TrEMBL
Match: A0A1S3C463 (uncharacterized protein LOC103496464 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496464 PE=4 SV=1) HSP 1 Score: 268 bits (685), Expect = 1.11e-82 Identity = 196/492 (39.84%), Postives = 208/492 (42.28%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. ExPASy TrEMBL
Match: A0A6J1BV97 (uncharacterized protein LOC111006018 OS=Momordica charantia OX=3673 GN=LOC111006018 PE=4 SV=1) HSP 1 Score: 242 bits (617), Expect = 1.81e-73 Identity = 188/511 (36.79%), Postives = 209/511 (40.90%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. TAIR 10
Match: AT2G28140.1 (Protein of unknown function (DUF1635) ) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-13 Identity = 50/121 (41.32%), Postives = 75/121 (61.98%), Query Frame = 0
HSP 2 Score: 67.4 bits (163), Expect = 3.8e-11 Identity = 37/88 (42.05%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. TAIR 10
Match: AT3G44940.1 (Protein of unknown function (DUF1635) ) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-13 Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 0
HSP 2 Score: 70.5 bits (171), Expect = 4.5e-12 Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. TAIR 10
Match: AT5G22930.1 (Protein of unknown function (DUF1635) ) HSP 1 Score: 71.6 bits (174), Expect = 2.0e-12 Identity = 45/88 (51.14%), Postives = 56/88 (63.64%), Query Frame = 0
HSP 2 Score: 59.3 bits (142), Expect = 1.0e-08 Identity = 62/213 (29.11%), Postives = 104/213 (48.83%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. TAIR 10
Match: AT2G28690.1 (Protein of unknown function (DUF1635) ) HSP 1 Score: 65.9 bits (159), Expect = 1.1e-10 Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of Cp4.1LG13g10330 vs. TAIR 10
Match: AT5G59760.1 (Protein of unknown function (DUF1635) ) HSP 1 Score: 55.5 bits (132), Expect = 1.5e-07 Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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