Cp4.1LG13g10200 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g10200
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RRM domain-containing protein
Location	Cp4.1LG13: 7086111 .. 7089720 (+)
RNA-Seq Expression	Cp4.1LG13g10200
Synteny	Cp4.1LG13g10200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTCTCAGTCTTCTCTCCGAGTTCCTGTGCTCGATTCACCGATCGAACCCACCGTTCCCTTTTGGTGGATGCGATGTTCATTTCCTCTGAATCCAGACAGGCTTCTATTCAATTCGCCTGGAATTTCGCATCTCATTCTAGTCAGGTGTCGATTTACAATCGTTCTAGACTAGCGGTGAGTTTACAGCCACTTTTTCTAGCTTTATTTCCCAAATCATGCTTAGAAAATGGAATCATGCTTAGAAAATGGAATTCCTGATTTACCGCTTCTTAGTTATGTTGATTACGTGATATGTAGTGTTGTTTTCGAGAGATGCATCGGTTTTTCTGTTGGTGAATTTCTGGTCGAGAAAGTACAAATCGAAAGAGAATCGGGGCCAGGAATGTTTGAAACTACGGAATTTAGGAGACATTTAAGATTCAAGACAACGCTGAACATGATTCAAACAGAACTTAGTATAATTCCTGAGGCTAATCTTAACCTAGATGGCGTAGAAATTCAAAACATCAAAGTTCAAACCAGATAGTAGGGCAATCATGCATCCAACTTACCTCCAATGGCGGCAAGCCTTTCATCGATCAGTTCCCCACCTTGACGAACAGATTCCAGTGAAGCTTCCACTGCTTTATATAGCAACAACCGGCACTCTCCCAATTTTTTAGATTTTTTTTTTTTTTTTTTTTAATTTAACCTAAATTTTATTGTTAACGATTTTAAAAATAGAATCCAATTTAAAAGTTTATTTATTTTATTTTATTTTATTTTATTTTTAATTATTGAATGAAATGGTGTAATAAACCGGGTCAAGACCAAGTCAAAGCTTAAAACGGCAGCGTTTAACCTGTCCTCCAGTCCTCGACCTACGTCCTGGTGATACGTCGCCTCCAACTTCACCGCGCTCTCTCTTTTCGTGCCTCTTCTTCCTCTTACTGTGTTTTCAGGTCAGTTCTCTCGAAACCCTAATCTTCGTTTTACTCTTCATAAACCCTAACTTTCCACTTGAATCTCGATTCCTCTTTTCCATTTCAGTTTTGAAATTCGGACTCATATCGTTACTTTCCGCTTCGGATTTCCTGAAATTTTCTTTGGCTGTTTGTTTGTTTGTTTGTTTTAGATCAATGGGGGCCAAGGCGAAGAAGGCTATGAAGAAGAAACTCAGTAAGGTTACTTCTTCCTTATCGGACAAGAAGGAATCTGCCGATTTCTTGGTATGTATGCTCTTCACACACTGTTCATCAATCCCTTCGACTCGGATTTTTATTTTGATTTTTGTTCATCCTTTCTCTTAACCTCTCTAGTGTTCTATGTACTTATTCCTCTCTCTTGCCTCTGTTTTTAGCCATTGGAGGGTGGTCCTGGGCGTAAATTACCAGCACAGAAGCCCCTGGAAAATACTGCTACTGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGTTTGGCCGCCTACATTTTACATTCAATGAAATTTTAAGTATAATTTTCTCGTTATCTTGTCTGCTGCTTCTTAAGGTATAGTTTTCTGTAGGGTTTTTCGGACAGTTTGGGAAAGTTAAAAGAATAAGAATTGCACGAAATAGAAAGGTATAGCTGGTTCCTATGGAGAATGTTGCATTGTATTAAGTTAATTCATCATGTAATTGAACATTCTTGCTCAGTATCTTCATCCATGGTTGAATTTTTGTACGCAGACTGGGAAGTCGAGGCATTTTGGATACATTGAATTTGAATCTCCAGAGGTATGTTAGGGCATTTGTACATGTAATTGTTCTAGATGTTCGTCATCTTAGACACTTTCAGTTTACCCCAAATTTGGATTTCGTGCGCACAGGTGGCAAAAATTGTGGCTGATTCTATGCATAACTATTTGTTGTATGAACACCTTCTGAAAGTCCATCTAATTTCTCCTGAGCATGTTCATCCCAAACTGTAAGTAATCAATTACATTTCTCCTGCTAGATTTTTGCATCAATCCTTGTGGGGGTGTAGTTGTTGAATTTTTCGAAGAACATTGTTTCGTTTGTCGTTTAAATGTTGTCATATTTGCAGATGGAAAGGTTTTAGCTATCGCCACAAGCCCTTAGATTGGTCTGAACTTGAGCGTAAGCAGCATAACAAGGTATTAAGCTTGGAAAATGATCTTTTAGACCATAAACATGCATCTCTATTTACTTGTTCTATGATAACTTTTCAGGAAAGGACATTGGACGAGCACAAGAAGTTGGTAGCGAGGATCTTGAAGCGGGATCAGGCTAGAAAGAAGAGGATAAGAGCTGCTGGGATTGATTATGAGTGTCCAGAAATTGTAAGAATCTTTTTTTTTCCAAAGATTATTAAATTGTAGCTGTTAATTTTTTTTAAAAAAAATGATAGATGTTTATTCACCAACCCCTGATTTCTACTTATCCTTGGAATTTTAACATTAATATAGATAGTGAGTCCATTCCTTAGTTTGATTGGCTGATTTCTGCTCCTGTGGTCAAACTCAATTCCCATGACAAAAACATTTCTGATTTTTTTTGCTATGATCGTCGACGAAACCATATTTTTGTGGCGAGAAAACAAGGCTGTCCAATATGAGCCAAACAAAACTAAACCATATACTTTTGATTTGGAGACATTTTTATGATTTCGTTAGTAACTAAAGAAATCATAAAAATGTCTCCAAATCAAAAGTATATGGTTAAGAGGGTAATTATAGAAGACATTAGAAGGGTAATTATGAAAGACCTCAGGTGTAGACATTGATTGGGTATGTTCTCGAGTTGAACAAACTGCAAACCTATATAGCTTCGAGTGCTTGTACATGGCTTCTAAGAACTTAAGCAACTTATTATGCCCCCCCTCTTCATGAGATACGATAGGTCGAAGTGAGATTCAGTGCCATGATTTGAATGCTGCAATCTGCTGGGGCTTCACCCCGATCTAGTTGGTGTTCTGCTGAGTTCTAGAATGTACAATTGCAGTCTAGTTTCCTAATGTGTTGACTCTGGATAATTTGCAGGTGGGCAGTGTCCAACCAGCTCCCAAGAAGATCAAGTTCGATGAAGATTAGAACGAGCGTTCGGTTCGTAGAAGGCTACAATATCATCACACCACAGGGAGGAAGGAAGGAAGGAGAGCGGGGGAGGTGATGAGCCCTTCCATCTTTCAAATTTCTTATGCTGGAGGGTAACCTTCCCAATATCCTTGAATCTCCAAATTTGATCTTTGGAATTTTGTGTCAAACATATTTTGAACTTTAGTAGTATGAATTTCCTTTTATAAAAATGAAAAAAAAAGTTATGTTGAAGCTTTATGGCTTACAATTCGGACTCGTCGCTAGGATGGGAAACCGAATGATCTATATGTATATTTTATCGTGTTTCAGCTTTGTCCATTCAAGTCTGTTTAGGGTCATTAAAATGATTGTCAATTTGATCATAACTCATTGAACGAGACATAAATTATCGATCTAAAAACCGATAATGAGATCTTGAATGGGCCATGATTGGGTTGAAAAAATGGAAAATGAGATATTTAAAAGATGGGACTAAAAAATGTGAACCAAATAAAGTAAAGTGGGTAAGGGTTGCCTCCCATTTTG

mRNA sequence

ATGTCACTCTCAGTCTTCTCTCCGAGTTCCTGTGCTCGATTCACCGATCGAACCCACCGTTCCCTTTTGGTGGATGCGATGTTCATTTCCTCTGAATCCAGACAGGCTTCTATTCAATTCGCCTGGAATTTCGCATCTCATTCTAGTCAGGTGTCGATTTACAATCGTTCTAGACTAGCGTCCTCGACCTACGTCCTGGTGATACGTCGCCTCCAACTTCACCGCGCTCTCTCTTTTCGTGCCTCTTCTTCCTCTTACTGTGTTTTCAGATCAATGGGGGCCAAGGCGAAGAAGGCTATGAAGAAGAAACTCAGTAAGGTTACTTCTTCCTTATCGGACAAGAAGGAATCTGCCGATTTCTTGCCATTGGAGGGTGGTCCTGGGCGTAAATTACCAGCACAGAAGCCCCTGGAAAATACTGCTACTGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTCGGACAGTTTGGGAAAGTTAAAAGAATAAGAATTGCACGAAATAGAAAGACTGGGAAGTCGAGGCATTTTGGATACATTGAATTTGAATCTCCAGAGGTGGCAAAAATTGTGGCTGATTCTATGCATAACTATTTGTTGTATGAACACCTTCTGAAAGTCCATCTAATTTCTCCTGAGCATGTTCATCCCAAACTATGGAAAGGTTTTAGCTATCGCCACAAGCCCTTAGATTGGTCTGAACTTGAGCGTAAGCAGCATAACAAGGAAAGGACATTGGACGAGCACAAGAAGTTGGTAGCGAGGATCTTGAAGCGGGATCAGGCTAGAAAGAAGAGGATAAGAGCTGCTGGGATTGATTATGAGTGTCCAGAAATTGTGGGCAGTGTCCAACCAGCTCCCAAGAAGATCAAGTTCGATGAAGATTAGAACGAGCGTTCGGTTCGTAGAAGGCTACAATATCATCACACCACAGGGAGGAAGGAAGGAAGGAGAGCGGGGGAGGTGATGAGCCCTTCCATCTTTCAAATTTCTTATGCTGGAGGGTAACCTTCCCAATATCCTTGAATCTCCAAATTTGATCTTTGGAATTTTGTGTCAAACATATTTTGAACTTTAGTAGTATGAATTTCCTTTTATAAAAATGAAAAAAAAAGTTATGTTGAAGCTTTATGGCTTACAATTCGGACTCGTCGCTAGGATGGGAAACCGAATGATCTATATGTATATTTTATCGTGTTTCAGCTTTGTCCATTCAAGTCTGTTTAGGGTCATTAAAATGATTGTCAATTTGATCATAACTCATTGAACGAGACATAAATTATCGATCTAAAAACCGATAATGAGATCTTGAATGGGCCATGATTGGGTTGAAAAAATGGAAAATGAGATATTTAAAAGATGGGACTAAAAAATGTGAACCAAATAAAGTAAAGTGGGTAAGGGTTGCCTCCCATTTTG

Coding sequence (CDS)

ATGTCACTCTCAGTCTTCTCTCCGAGTTCCTGTGCTCGATTCACCGATCGAACCCACCGTTCCCTTTTGGTGGATGCGATGTTCATTTCCTCTGAATCCAGACAGGCTTCTATTCAATTCGCCTGGAATTTCGCATCTCATTCTAGTCAGGTGTCGATTTACAATCGTTCTAGACTAGCGTCCTCGACCTACGTCCTGGTGATACGTCGCCTCCAACTTCACCGCGCTCTCTCTTTTCGTGCCTCTTCTTCCTCTTACTGTGTTTTCAGATCAATGGGGGCCAAGGCGAAGAAGGCTATGAAGAAGAAACTCAGTAAGGTTACTTCTTCCTTATCGGACAAGAAGGAATCTGCCGATTTCTTGCCATTGGAGGGTGGTCCTGGGCGTAAATTACCAGCACAGAAGCCCCTGGAAAATACTGCTACTGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTCGGACAGTTTGGGAAAGTTAAAAGAATAAGAATTGCACGAAATAGAAAGACTGGGAAGTCGAGGCATTTTGGATACATTGAATTTGAATCTCCAGAGGTGGCAAAAATTGTGGCTGATTCTATGCATAACTATTTGTTGTATGAACACCTTCTGAAAGTCCATCTAATTTCTCCTGAGCATGTTCATCCCAAACTATGGAAAGGTTTTAGCTATCGCCACAAGCCCTTAGATTGGTCTGAACTTGAGCGTAAGCAGCATAACAAGGAAAGGACATTGGACGAGCACAAGAAGTTGGTAGCGAGGATCTTGAAGCGGGATCAGGCTAGAAAGAAGAGGATAAGAGCTGCTGGGATTGATTATGAGTGTCCAGAAATTGTGGGCAGTGTCCAACCAGCTCCCAAGAAGATCAAGTTCGATGAAGATTAG

Protein sequence

MSLSVFSPSSCARFTDRTHRSLLVDAMFISSESRQASIQFAWNFASHSSQVSIYNRSRLASSTYVLVIRRLQLHRALSFRASSSSYCVFRSMGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQARKKRIRAAGIDYECPEIVGSVQPAPKKIKFDED

Homology

[Close]

BLAST of Cp4.1LG13g10200 vs. ExPASy Swiss-Prot
Match: O74978 (Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1827.05c PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.5e-31
Identity = 65/155 (41.94%), Postives = 103/155 (66.45%), Query Frame = 0


Query: 129 RKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYI 188
           +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V R+R++RNRKTG S+H+ +I
Sbjct: 92  KKVSENKNLQKKKGVLYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFI 151

Query: 189 EFESPEVAKIVADSMHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQH 248
           EFES +VA +VA++MHNYLLY  LL+  +I  + VH  ++KG     K +  + + R QH
Sbjct: 152 EFESLDVANVVAETMHNYLLYGKLLQCKVIPEDQVHENMFKGADVPFKRIPHATIARLQH 211

Query: 249 NKERTLDEHKKLVARILKRDQARKKRIRAAGIDYE 284
            K  + ++  KL+ R  ++ + +K++++  GI  E
Sbjct: 212 EKPLSKEKADKLITRHNRKLKLKKRKLKELGITLE 246

[Close]

BLAST of Cp4.1LG13g10200 vs. ExPASy Swiss-Prot
Match: Q8JIY8 (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio OX=7955 GN=nifk PE=2 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29
Identity = 67/154 (43.51%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 143 VLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADS 202
           VLY+G +P G FE +++ +F QFGKV R+R++R++KTG S+ +G++EFE  EVAKIVA++
Sbjct: 46  VLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAET 105

Query: 203 MHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVA 262
           M+NYL+ E ++K H+I PE VH KL+ G     K   +  + R  +NK  T D+ KK+  
Sbjct: 106 MNNYLMGERIIKCHVIPPEKVHEKLFVGSIAGFKKPKYPAVTR--YNKTHTEDDVKKVGT 165

Query: 263 RILKRDQARKKRIRAAGIDYECPEIVGSVQPAPK 297
           ++L ++   +KR+ A GIDY+ P     + PA K
Sbjct: 166 KLLSKESKLRKRLAAKGIDYDFPGFAAQI-PAKK 196

[Close]

BLAST of Cp4.1LG13g10200 vs. ExPASy Swiss-Prot
Match: Q6GL69 (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis OX=8364 GN=nifk PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.2e-27
Identity = 62/143 (43.36%), Postives = 93/143 (65.03%), Query Frame = 0


Query: 143 VLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADS 202
           V+YIG IP   +E ++  +F QFG V R+R++R++KTG S+ + Y+EFE  EVAKIVAD+
Sbjct: 42  VIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADT 101

Query: 203 MHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVA 262
           M+NYL  E LLK   + PE VHP+L+ G + + +      + R  +NK R+  E KK+  
Sbjct: 102 MNNYLFCERLLKCEFVPPEKVHPRLFIGCTAKFRKPTKPAVSR--YNKRRSEAEQKKMTQ 161

Query: 263 RILKRDQARKKRIRAAGIDYECP 286
           R+L ++   +KR+   GIDY+ P
Sbjct: 162 RMLSKENKVRKRLAEKGIDYDFP 182

[Close]

BLAST of Cp4.1LG13g10200 vs. ExPASy Swiss-Prot
Match: Q7SYS2 (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis OX=8355 GN=nifk PE=2 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-27
Identity = 61/146 (41.78%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 140 TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIV 199
           T  V+YIG IP    E +++ +F QFG V R+R++R++KTG S+ + Y+E+E  EVAKIV
Sbjct: 39  TPGVIYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIV 98

Query: 200 ADSMHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKK 259
           AD+M+NYL  E LLK   ++PE VHP+L+ G + R +      + R  +N +R  +E KK
Sbjct: 99  ADTMNNYLFCERLLKCEFVTPEKVHPRLFIGCNTRFRKPTKPAVTR--YNSKRNKEEVKK 158

Query: 260 LVARILKRDQARKKRIRAAGIDYECP 286
           +  R++ ++   +KR+   GIDY+ P
Sbjct: 159 MTQRMISKEYKLRKRLAEKGIDYDFP 182

[Close]

BLAST of Cp4.1LG13g10200 vs. ExPASy Swiss-Prot
Match: Q3SZM1 (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus OX=9913 GN=NIFK PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.1e-26
Identity = 60/160 (37.50%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 129 RKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYI 188
           R    Q+  + T  V+Y+G +P   +E ++  +F QFG V R R++R++KTG S+ +G++
Sbjct: 32  RATKQQEKQKPTPGVIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFV 91

Query: 189 EFESPEVAKIVADSMHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQH 248
           EFES +VAKI A++M+NYL  E LLK H I PE VH +L++ +    K   +  +  K++
Sbjct: 92  EFESEDVAKIAAETMNNYLFGERLLKCHFIPPEKVHEELFREWHMPFKRPSYPAV--KRY 151

Query: 249 NKERTLDEHKKLVARILKRDQARKKRIRAAGIDYECPEIV 289
           N+ R+L +  ++  R  K+++  +KR+   GIDY  P +V
Sbjct: 152 NQNRSLVQKLRMEERFKKKEKLLRKRLAKKGIDYNFPSLV 189

[Close]

BLAST of Cp4.1LG13g10200 vs. NCBI nr
Match: XP_023550343.1 (MKI67 FHA domain-interacting nucleolar phosphoprotein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 597 bits (1538), Expect = 1.75e-214
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MSLSVFSPSSCARFTDRTHRSLLVDAMFISSESRQASIQFAWNFASHSSQVSIYNRSRLA 60
           MSLSVFSPSSCARFTDRTHRSLLVDAMFISSESRQASIQFAWNFASHSSQVSIYNRSRLA
Sbjct: 28  MSLSVFSPSSCARFTDRTHRSLLVDAMFISSESRQASIQFAWNFASHSSQVSIYNRSRLA 87

Query: 61  SSTYVLVIRRLQLHRALSFRASSSSYCVFRSMGAKAKKAMKKKLSKVTSSLSDKKESADF 120
           SSTYVLVIRRLQLHRALSFRASSSSYCVFRSMGAKAKKAMKKKLSKVTSSLSDKKESADF
Sbjct: 88  SSTYVLVIRRLQLHRALSFRASSSSYCVFRSMGAKAKKAMKKKLSKVTSSLSDKKESADF 147

Query: 121 LPLEGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTG 180
           LPLEGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTG
Sbjct: 148 LPLEGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTG 207

Query: 181 KSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDW 240
           KSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDW
Sbjct: 208 KSRHFGYIEFESPEVAKIVADSMHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDW 267

Query: 241 SELERKQHNKERTLDEHKKLVARILKRDQARKKRIRAAGIDYECPEIVGSVQPAPKKIKF 300
           SELERKQHNKERTLDEHKKLVARILKRDQARKKRIRAAGIDYECPEIVGSVQPAPKKIKF
Sbjct: 268 SELERKQHNKERTLDEHKKLVARILKRDQARKKRIRAAGIDYECPEIVGSVQPAPKKIKF 327

Query: 301 DED 303
           DED
Sbjct: 328 DED 330

[Close]

BLAST of Cp4.1LG13g10200 vs. NCBI nr
Match: KAG6578778.1 (MKI67 FHA domain-interacting nucleolar phosphoprotein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 452 bits (1162), Expect = 9.94e-158
Identity = 225/228 (98.68%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 76  ALSFRASSSSYCVFRSMGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQK 135
           +LSFRASSSSYC+F SMGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQK
Sbjct: 70  SLSFRASSSSYCIFISMGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQK 129

Query: 136 PLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEV 195
           PLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEV
Sbjct: 130 PLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEV 189

Query: 196 AKIVADSMHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLD 255
           AKIVADSMHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLD
Sbjct: 190 AKIVADSMHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLD 249

Query: 256 EHKKLVARILKRDQARKKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 303
           EHKKLVARILKRDQARKKRIRAAGIDYECPEIVGSVQPAPKKIKFDED
Sbjct: 250 EHKKLVARILKRDQARKKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 297

[Close]

BLAST of Cp4.1LG13g10200 vs. NCBI nr
Match: KAG7016308.1 (MKI67 FHA domain-interacting nucleolar phosphoprotein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427 bits (1098), Expect = 2.58e-149
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 92  MGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 151
           MGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 152 GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 211
           GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 212 LLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 271
           LLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 180

Query: 272 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 303
           KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 212

[Close]

BLAST of Cp4.1LG13g10200 vs. NCBI nr
Match: XP_022938360.1 (uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata])

HSP 1 Score: 423 bits (1087), Expect = 1.22e-147
Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 92  MGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 151
           MGAKAKKAMKKKLSKVT SLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKVTYSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 152 GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 211
           GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 212 LLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 271
           LLKVHLISPEHVHPKLWKGFSY HKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFSYHHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 180

Query: 272 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 303
           KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 212

[Close]

BLAST of Cp4.1LG13g10200 vs. NCBI nr
Match: XP_022993750.1 (uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima])

HSP 1 Score: 422 bits (1086), Expect = 1.73e-147
Identity = 209/212 (98.58%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 92  MGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 151
           MGAKAKKAMKKKLSK TSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKATSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 152 GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 211
           GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 212 LLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 271
           LLKVHLISPEHVHPKLWKGF+YRHKPLDWSELERKQHNKERTLDEHKKLV RILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFNYRHKPLDWSELERKQHNKERTLDEHKKLVERILKRDQAR 180

Query: 272 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 303
           KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 212

[Close]

BLAST of Cp4.1LG13g10200 vs. ExPASy TrEMBL
Match: A0A6J1FJK1 (uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662 GN=LOC111444637 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 5.91e-148
Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 92  MGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 151
           MGAKAKKAMKKKLSKVT SLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKVTYSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 152 GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 211
           GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 212 LLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 271
           LLKVHLISPEHVHPKLWKGFSY HKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFSYHHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 180

Query: 272 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 303
           KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 212

[Close]

BLAST of Cp4.1LG13g10200 vs. ExPASy TrEMBL
Match: A0A6J1JZE0 (uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita maxima OX=3661 GN=LOC111489660 PE=4 SV=1)

HSP 1 Score: 422 bits (1086), Expect = 8.40e-148
Identity = 209/212 (98.58%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 92  MGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 151
           MGAKAKKAMKKKLSK TSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKATSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 152 GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 211
           GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 212 LLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 271
           LLKVHLISPEHVHPKLWKGF+YRHKPLDWSELERKQHNKERTLDEHKKLV RILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFNYRHKPLDWSELERKQHNKERTLDEHKKLVERILKRDQAR 180

Query: 272 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 303
           KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 212

[Close]

BLAST of Cp4.1LG13g10200 vs. ExPASy TrEMBL
Match: A0A1S3C4U7 (uncharacterized RNA-binding protein C1827.05c OS=Cucumis melo OX=3656 GN=LOC103496493 PE=4 SV=1)

HSP 1 Score: 395 bits (1016), Expect = 3.83e-137
Identity = 193/212 (91.04%), Postives = 202/212 (95.28%), Query Frame = 0


Query: 92  MGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 151
           MGAKAKKAMKKKL K T   SDKKESADFLPLEGGPGRKLP QKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPH 60

Query: 152 GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 211
           GFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGY+EFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEH 120

Query: 212 LLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 271
           +LKVHLI+PEHVHPKLWKGF+YRH PL+WSELERKQHNKERTL EHKKLV RILKRDQAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQAR 180

Query: 272 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 303
           +KRIRAAGIDYECPEIVGSVQP PKKIKFDED
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 212

[Close]

BLAST of Cp4.1LG13g10200 vs. ExPASy TrEMBL
Match: A0A6J1E350 (uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662 GN=LOC111430401 PE=4 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 6.33e-136
Identity = 191/212 (90.09%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 92  MGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 151
           MGAKAKKAMKKKL+K TS LS+KKESADFLPLEGGPGRKLPAQKPLE+TATVLYI RIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPH 60

Query: 152 GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 211
           GFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGYIEF+SPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEH 120

Query: 212 LLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 271
           +LKVHLI+PEHVHPKLWKGF+YRH PL+WSELERK+HNKERTL EH+KLV RILKR+QAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQAR 180

Query: 272 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 303
           +KRIRAAGIDYECPEIVGSVQP PKKIKFDED
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 212

[Close]

BLAST of Cp4.1LG13g10200 vs. ExPASy TrEMBL
Match: A0A6J1BYN0 (uncharacterized RNA-binding protein C1827.05c OS=Momordica charantia OX=3673 GN=LOC111006666 PE=4 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 7.36e-135
Identity = 192/211 (91.00%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 92  MGAKAKKAMKKKLSKVTSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 151
           MGAKAKKAMKKKL+K TS LS+KKESADFLPL GGPGRKLPAQKPLENTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 152 GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 211
           GFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 212 LLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 271
           +LKVHLI PEHVHPKLWKGF+YR+KPL+  ELERKQHNKERTL EH+KLV RILKRDQAR
Sbjct: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180

Query: 272 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDE 302
           +KRIRAAGI+YECPEIVGSVQPAPKKIKFDE
Sbjct: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211

[Close]

BLAST of Cp4.1LG13g10200 vs. TAIR 10
Match: AT5G04600.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 283.1 bits (723), Expect = 2.6e-76
Identity = 138/221 (62.44%), Postives = 176/221 (79.64%), Query Frame = 0


Query: 92  MGAKAKKAMKKKLSKVTSSLS--------DKKESADFLPLEGGPGRKLP-AQKPLENTAT 151
           MGAKAKKA+KK + KV +S S        + K SADFLPLEGGP RK P    PL+N AT
Sbjct: 1   MGAKAKKALKKNMKKVAASASSSQLPLPQNPKPSADFLPLEGGPARKAPVTTPPLQNKAT 60

Query: 152 VLYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADS 211
           VLYIGRIPHGF+E E+E FF QFG VKR+R+ARN+KTGKS+HFG+I+FE PEVA+I A +
Sbjct: 61  VLYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAGA 120

Query: 212 MHNYLLYEHLLKVHLISPEHVHPKLWKGFSYRHKPLDWSELERKQHNKERTLDEHKKLVA 271
           M++YLL EH+LKVH+I PE+V P LW+GF    KP+D  ++ER+Q NKERTL+EH+K++ 
Sbjct: 121 MNDYLLMEHMLKVHVIEPENVKPNLWRGFKCNFKPVDSVQIERRQLNKERTLEEHRKMLQ 180

Query: 272 RILKRDQARKKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 304
           +I+K+DQ R+KRI AAGI+YECPE+VG+ QP PK+IKF E+
Sbjct: 181 KIVKKDQKRRKRIEAAGIEYECPELVGNTQPVPKRIKFSEE 221

[Close]

BLAST of Cp4.1LG13g10200 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-07
Identity = 33/110 (30.00%), Postives = 54/110 (49.09%), Query Frame = 0


Query: 132 PAQKPLENTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIE 191
           P ++ +E+ + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG+I 
Sbjct: 3   PEEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIV 62

Query: 192 FESPEVAKIVADSMH-----------------NYLLYEHLLKVHLISPEH 223
           F  P VA+ V    H                   +L  H   +HLISP H
Sbjct: 63  FADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSH 112

[Close]

BLAST of Cp4.1LG13g10200 vs. TAIR 10
Match: AT4G26650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-06
Identity = 31/96 (32.29%), Postives = 46/96 (47.92%), Query Frame = 0


Query: 144 LYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSM 203
           L+IG I     E+ ++ +FG++G +    I R+R TG++R FG+I F  P VA+ V    
Sbjct: 14  LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDK 73

Query: 204 H-----------------NYLLYEHLLKVHLISPEH 223
           H                   +L  H   +HLISP H
Sbjct: 74  HIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSH 109

[Close]

BLAST of Cp4.1LG13g10200 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06
Identity = 24/62 (38.71%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 144 LYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSM 203
           L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG++ F  P VA+IV    
Sbjct: 8   LFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITEK 67

Query: 204 HN 206
           HN
Sbjct: 68  HN 69

[Close]

BLAST of Cp4.1LG13g10200 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06
Identity = 24/62 (38.71%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 144 LYIGRIPHGFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSM 203
           L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG++ F  P VA+IV    
Sbjct: 8   LFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITEK 67

Query: 204 HN 206
           HN
Sbjct: 68  HN 69

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g10200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74978	9.5e-31	41.94	Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe (stra...	[more]
Q8JIY8	1.1e-29	43.51	MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio OX=7955 GN=...	[more]
Q6GL69	2.2e-27	43.36	MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis...	[more]
Q7SYS2	3.7e-27	41.78	MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis OX=...	[more]
Q3SZM1	4.1e-26	37.50	MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus OX=9913 GN=N...	[more]

BLAST of Cp4.1LG13g10200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550343.1	1.75e-214	100.00	MKI67 FHA domain-interacting nucleolar phosphoprotein-like [Cucurbita pepo subsp...	[more]
KAG6578778.1	9.94e-158	98.68	MKI67 FHA domain-interacting nucleolar phosphoprotein, partial [Cucurbita argyro...	[more]
KAG7016308.1	2.58e-149	100.00	MKI67 FHA domain-interacting nucleolar phosphoprotein, partial [Cucurbita argyro...	[more]
XP_022938360.1	1.22e-147	99.06	uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]	[more]
XP_022993750.1	1.73e-147	98.58	uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG13g10200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJK1	5.91e-148	99.06	uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JZE0	8.40e-148	98.58	uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A1S3C4U7	3.83e-137	91.04	uncharacterized RNA-binding protein C1827.05c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1E350	6.33e-136	90.09	uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1BYN0	7.36e-135	91.00	uncharacterized RNA-binding protein C1827.05c OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of Cp4.1LG13g10200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04600.1	2.6e-76	62.44	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	2.6e-07	30.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.2	1.3e-06	32.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	2.9e-06	38.71	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	2.9e-06	38.71	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 243..263
None	No IPR available	PANTHER	PTHR46754:SF9	SUBFAMILY NOT NAMED	coord: 92..303
None	No IPR available	PANTHER	PTHR46754	MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN	coord: 92..303
None	No IPR available	CDD	cd12307	RRM_NIFK_like	coord: 143..216 e-value: 1.17689E-41 score: 136.936
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 143..216 e-value: 8.6E-20 score: 81.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 144..212 e-value: 1.2E-13 score: 50.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 142..220 score: 15.050424
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 90..225 e-value: 2.2E-21 score: 78.4
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 124..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g10200.1	Cp4.1LG13g10200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding