Cp4.1LG13g10050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g10050
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DVL-like protein
Location	Cp4.1LG13: 7111873 .. 7112064 (-)
RNA-Seq Expression	Cp4.1LG13g10050
Synteny	Cp4.1LG13g10050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAAGAAAGAAGAAGGCTGTGCAGAAGGGAAGTACGCGACTCGTCGTCGGCTTGCAGTAGGAGATCAGCAACGACGTCGTTTAAGCAGAGATGCAGTTTACTGGTGAAAGAGCAGAGAGCTAGGTTTTACATTCTTCGCCGATGTGTCGTCATGCTCGTGTGTTGGAATTACTATGCTGACCCTTGA

mRNA sequence

ATGATGGAAGAAAGAAGAAGGCTGTGCAGAAGGGAAGTACGCGACTCGTCGTCGGCTTGCAGTAGGAGATCAGCAACGACGTCGTTTAAGCAGAGATGCAGTTTACTGGTGAAAGAGCAGAGAGCTAGGTTTTACATTCTTCGCCGATGTGTCGTCATGCTCGTGTGTTGGAATTACTATGCTGACCCTTGA

Coding sequence (CDS)

ATGATGGAAGAAAGAAGAAGGCTGTGCAGAAGGGAAGTACGCGACTCGTCGTCGGCTTGCAGTAGGAGATCAGCAACGACGTCGTTTAAGCAGAGATGCAGTTTACTGGTGAAAGAGCAGAGAGCTAGGTTTTACATTCTTCGCCGATGTGTCGTCATGCTCGTGTGTTGGAATTACTATGCTGACCCTTGA

Protein sequence

MMEERRRLCRREVRDSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP

Homology

[Close]

BLAST of Cp4.1LG13g10050 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.5e-07
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 7  RLCRREVRDSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCW-NYYAD 63
          R+ R     SSS   ++    +F ++C+ LVKEQRARFYI+RRCV+ML+CW + Y+D
Sbjct: 30 RITRSSSTSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRCVIMLICWRDNYSD 86

[Close]

BLAST of Cp4.1LG13g10050 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-06
Identity = 30/57 (52.63%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 6   RRLCRREVRDSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYAD 63
           R   R+E R SSS+ S      S  Q+ S L KEQ+ARFYI+RRCV MLVCW+ + D
Sbjct: 64  RSFSRKERRSSSSSSS------SITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGD 114

[Close]

BLAST of Cp4.1LG13g10050 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.9e-06
Identity = 21/31 (67.74%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 28 SFKQRCSLLVKEQRARFYILRRCVVMLVCWN 59
          +F Q+CS +VK+QRA+FYILRRC+ MLVCW+
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWH 44

[Close]

BLAST of Cp4.1LG13g10050 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 6.4e-06
Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 15 DSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCW 58
          +++ +  ++     F ++C  LVKEQRARFYI+RRCVVML+CW
Sbjct: 26 NTTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICW 68

[Close]

BLAST of Cp4.1LG13g10050 vs. ExPASy Swiss-Prot
Match: Q6IM82 (Small polypeptide DEVIL 19 OS=Arabidopsis thaliana OX=3702 GN=DVL19 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.2e-05
Identity = 21/35 (60.00%), Postives = 24/35 (68.57%), Query Frame = 0


Query: 28 SFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYAD 63
          +F  +C  LVKEQRAR YILRRC  ML CW  + D
Sbjct: 13 AFTSKCVSLVKEQRARLYILRRCATMLCCWYIHGD 47

[Close]

BLAST of Cp4.1LG13g10050 vs. NCBI nr
Match: KAG7016303.1 (hypothetical protein SDJN02_21410, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124 bits (310), Expect = 1.70e-35
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1  MMEERRRLCRREVRDSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60
          MMEERRRLCR EVRDSSSACSRRSAT SFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY
Sbjct: 1  MMEERRRLCRGEVRDSSSACSRRSATASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60

Query: 61 ADP 63
          ADP
Sbjct: 61 ADP 63

[Close]

BLAST of Cp4.1LG13g10050 vs. NCBI nr
Match: KAE8647306.1 (hypothetical protein Csa_004317 [Cucumis sativus])

HSP 1 Score: 106 bits (264), Expect = 1.65e-28
Identity = 54/63 (85.71%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 1  MMEERRRLCRREVRDSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60
          M EERRRLC+R     SSACSRRS T SFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY
Sbjct: 1  MTEERRRLCKRTP---SSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60

Query: 61 ADP 63
          ADP
Sbjct: 61 ADP 60

[Close]

BLAST of Cp4.1LG13g10050 vs. NCBI nr
Match: KAA0036490.1 (DVL-like protein [Cucumis melo var. makuwa] >TYJ99996.1 DVL-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 105 bits (262), Expect = 3.33e-28
Identity = 54/63 (85.71%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 1  MMEERRRLCRREVRDSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60
          M EE RRLC+R    SSSACSRRS T SFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY
Sbjct: 1  MTEEGRRLCKRT---SSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60

Query: 61 ADP 63
          ADP
Sbjct: 61 ADP 60

[Close]

BLAST of Cp4.1LG13g10050 vs. NCBI nr
Match: DAD28534.1 (TPA_asm: hypothetical protein HUJ06_030002 [Nelumbo nucifera])

HSP 1 Score: 68.6 bits (166), Expect = 1.28e-13
Identity = 36/51 (70.59%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 15 DSSSACSR--RSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 63
          +SSS C R  R    SF QRCS LVKEQRARFYILRRCV MLVCWN   DP
Sbjct: 4  NSSSFCCRHLRDPCRSFGQRCSRLVKEQRARFYILRRCVTMLVCWNECGDP 54

[Close]

BLAST of Cp4.1LG13g10050 vs. NCBI nr
Match: DAD26787.1 (TPA_asm: hypothetical protein HUJ06_028255 [Nelumbo nucifera])

HSP 1 Score: 68.2 bits (165), Expect = 1.82e-13
Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 17 SSACSR--RSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 63
          +S CSR  R    SF QRCS LVKEQRARFYILRRCV+MLVCWN   DP
Sbjct: 6  TSFCSRHLRDPCRSFGQRCSRLVKEQRARFYILRRCVIMLVCWNDCGDP 54

[Close]

BLAST of Cp4.1LG13g10050 vs. ExPASy TrEMBL
Match: A0A5A7SZH0 (DVL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00410 PE=4 SV=1)

HSP 1 Score: 105 bits (262), Expect = 1.61e-28
Identity = 54/63 (85.71%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 1  MMEERRRLCRREVRDSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60
          M EE RRLC+R    SSSACSRRS T SFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY
Sbjct: 1  MTEEGRRLCKRT---SSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60

Query: 61 ADP 63
          ADP
Sbjct: 61 ADP 60

[Close]

BLAST of Cp4.1LG13g10050 vs. ExPASy TrEMBL
Match: A0A2C9V3J5 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G049900 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.53e-13
Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 1  MMEERRRLCRREVRDSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60
          M +E    C R VRD            SF Q+CS LVKEQRA+FYILRRC+VML+CWN Y
Sbjct: 1  MKQENTSFCNRHVRDPCR---------SFGQKCSRLVKEQRAKFYILRRCIVMLICWNEY 53

Query: 61 AD 62
           D
Sbjct: 61 GD 53

[Close]

BLAST of Cp4.1LG13g10050 vs. ExPASy TrEMBL
Match: B9HLH7 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G035900 PE=4 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 2.96e-12
Identity = 34/63 (53.97%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 1  MMEERRRLCRREVRDSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60
          M +E    C + VRD            SF +RCS LVKEQRARFYILRRCV MLVCW+ Y
Sbjct: 1  MKQENTGFCSKHVRDPCR---------SFGRRCSSLVKEQRARFYILRRCVTMLVCWHDY 54

Query: 61 ADP 63
           +P
Sbjct: 61 GEP 54

[Close]

BLAST of Cp4.1LG13g10050 vs. ExPASy TrEMBL
Match: A0A3N7FP95 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G226250 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.03e-12
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 15 DSSSACSR--RSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 63
          +++  CS+  R    SF +RCS LVKEQRARFYILRRCV MLVCW+ Y +P
Sbjct: 5  ENTGFCSKHVREPCRSFGRRCSSLVKEQRARFYILRRCVTMLVCWHEYGEP 55

[Close]

BLAST of Cp4.1LG13g10050 vs. ExPASy TrEMBL
Match: A0A2P6SJ99 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0362751 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.48e-12
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 6  RRLCRREVRDSSSA----CSR--RSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNY 63
          R  C + V++ +S+    CS+  R    SF +RCS+LVKEQRARFYILRRC+ ML+CW  
Sbjct: 12 RNFCSKHVQEQNSSNSNFCSKHVRDPCRSFGRRCSMLVKEQRARFYILRRCITMLMCWRE 71

[Close]

BLAST of Cp4.1LG13g10050 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 )

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-08
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 7  RLCRREVRDSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCW-NYYAD 63
          R+ R     SSS   ++    +F ++C+ LVKEQRARFYI+RRCV+ML+CW + Y+D
Sbjct: 30 RITRSSSTSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRCVIMLICWRDNYSD 86

[Close]

BLAST of Cp4.1LG13g10050 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 )

HSP 1 Score: 53.1 bits (126), Expect = 9.2e-08
Identity = 30/57 (52.63%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 6   RRLCRREVRDSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYAD 63
           R   R+E R SSS+ S      S  Q+ S L KEQ+ARFYI+RRCV MLVCW+ + D
Sbjct: 64  RSFSRKERRSSSSSSS------SITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGD 114

[Close]

BLAST of Cp4.1LG13g10050 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein )

HSP 1 Score: 51.2 bits (121), Expect = 3.5e-07
Identity = 21/31 (67.74%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 28 SFKQRCSLLVKEQRARFYILRRCVVMLVCWN 59
          +F Q+CS +VK+QRA+FYILRRC+ MLVCW+
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWH 44

[Close]

BLAST of Cp4.1LG13g10050 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 )

HSP 1 Score: 50.8 bits (120), Expect = 4.6e-07
Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 15 DSSSACSRRSATTSFKQRCSLLVKEQRARFYILRRCVVMLVCW 58
          +++ +  ++     F ++C  LVKEQRARFYI+RRCVVML+CW
Sbjct: 26 NTTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICW 68

[Close]

BLAST of Cp4.1LG13g10050 vs. TAIR 10
Match: AT1G53708.1 (ROTUNDIFOLIA like 9 )

HSP 1 Score: 48.1 bits (113), Expect = 3.0e-06
Identity = 21/35 (60.00%), Postives = 24/35 (68.57%), Query Frame = 0


Query: 28 SFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYAD 63
          +F  +C+ LVKEQRAR YILRRC  ML CW    D
Sbjct: 13 AFTSKCASLVKEQRARLYILRRCATMLCCWYIQGD 47

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g10050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8S3	1.5e-07	49.12	Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1	[more]
Q8L7D0	1.3e-06	52.63	Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1	[more]
Q7XXN8	4.9e-06	67.74	Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1	[more]
Q6IM93	6.4e-06	51.16	Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1	[more]
Q6IM82	4.2e-05	60.00	Small polypeptide DEVIL 19 OS=Arabidopsis thaliana OX=3702 GN=DVL19 PE=3 SV=1	[more]

BLAST of Cp4.1LG13g10050 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016303.1	1.70e-35	96.83	hypothetical protein SDJN02_21410, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAE8647306.1	1.65e-28	85.71	hypothetical protein Csa_004317 [Cucumis sativus]	[more]
KAA0036490.1	3.33e-28	85.71	DVL-like protein [Cucumis melo var. makuwa] >TYJ99996.1 DVL-like protein [Cucumi...	[more]
DAD28534.1	1.28e-13	70.59	TPA_asm: hypothetical protein HUJ06_030002 [Nelumbo nucifera]	[more]
DAD26787.1	1.82e-13	71.43	TPA_asm: hypothetical protein HUJ06_028255 [Nelumbo nucifera]	[more]

BLAST of Cp4.1LG13g10050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZH0	1.61e-28	85.71	DVL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G004...	[more]
A0A2C9V3J5	2.53e-13	54.84	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G049900 PE=4 SV=...	[more]
B9HLH7	2.96e-12	53.97	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G035900 PE=4 ...	[more]
A0A3N7FP95	3.03e-12	60.78	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G226250 PE=4 ...	[more]
A0A2P6SJ99	3.48e-12	51.56	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0362751 PE=4...	[more]

BLAST of Cp4.1LG13g10050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39705.1	1.1e-08	49.12	ROTUNDIFOLIA like 8	[more]
AT2G29125.1	9.2e-08	52.63	ROTUNDIFOLIA like 2	[more]
AT2G36985.1	3.5e-07	67.74	DVL family protein	[more]
AT3G55515.1	4.6e-07	51.16	ROTUNDIFOLIA like 7	[more]
AT1G53708.1	3.0e-06	60.00	ROTUNDIFOLIA like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 38..56 e-value: 7.6E-13 score: 48.0
None	No IPR available	PANTHER	PTHR33102	DVL19-RELATED-RELATED	coord: 11..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g10050.1	Cp4.1LG13g10050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005886	plasma membrane