Cp4.1LG13g10020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g10020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	rhomboid-like protein 19
Location	Cp4.1LG13: 7236254 .. 7242284 (+)
RNA-Seq Expression	Cp4.1LG13g10020
Synteny	Cp4.1LG13g10020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTAGCGTTGTACACTACACCTCACCACACCCAATAACCCACATCTCTACGTTTCGGCTCACTCTCTCTTTAACCCAAAAGTCTCAGGCGAAGCAAAACAATCCATTTTGATCCCGCAACTCCGATCACCGTCATCCACTGTCCGCCGTCTCCGCCCATGAGTACTCCAGCAGTTCCGGGGGTAAGCTCTGATACAATTGTTTGCTTTTAATCTCTTCTTAAATGGTGGTCTCTTAGTCGCATTCAGATCTCGTAGTTCGTCTTTTTTTATCTTCTAATGTGCATGCCAGATCTTGACATTGTCTCGAAATTCAGCGACGTTTCTATTGATTTTTTTTTTCTTGTTTTGTTTTGTATTTGGACAGAGCTCTGGTTTGTTTACTGGATTCACCAAGCTATGCAAGGGCTTGGCCGTCGTGCTAATTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGCTGTTAACTATCTTGCTCTTATTCCATCCAGGTATCTTTTTTGGAGAATTTAGTTTTTGGATTAGTGGTAATGAAAACTGTGCGAAGATGATGACTTCATAGCCGAATCTATGCGATGCGTACGTTCTTGTAGTAATGCCAGTAGGTTTCCGATTAGAAATGACTTCGTTTATCGAGTTGAAATTTAGTTTGGAAAGAATCTAGAATCTTGTGATCACTTCGATTGTGAGTGAATTATTGTGATCTAGAGGCTTGTCTTGTGGGATTGATGGAAGTTGGTCAATAGTTTAGTTGCATTGCTTGGAAATGTTGTCATAATTGCAACGATTCTGTCGATTCCACAATTGGCCATACAATCCATGTACTGTTCTGTTCTTCTTCAGAATAGAACGCTTATGTTTATAGGAAGTAGCAACAGACCATCTGAGAGGCTACGCAATCTACTGGTTTAGGGTGCCAATGGTTGTGTTGCAGGGGCCTGAGTGTATTATTTTGATNTTTTTTTTTTTTGTAGTGAAGAATCCAAAGATGTTATTACCTCCATGTAGCCAGATGTTTTCACTGCTAACCAATCTGAATTATGAACTCTGCTGAATAATTAGGGGAAGCATCCCCACCTGAGTGTGAAATGTGAATCCCTTACCATTCTGAATTGGCTTAATTTCCTGATAGGGAAAAAGAAATTAAGTGAAAATGTAGAGAAAGATATCCTCTGTTAGAGAAGGAAATTAGAGAAAAAAATCAAGCCATCTAGAGGAAAAATGTATAAAAATGAGCCCAAAATCTGAATGTTCACACTCTTGGACCAGCAAGAGGTATAATATAAATATTTTTTCTCTGAAATTTATCCATCTTAATATTTTTGTTAGAAAATAAAAGTCTTCCTTTCCTACCCAACTACTCAACGAAGAGCTGAAACTGCATGCATTTAATATGACCTTGATCTTTGACATCTTCTGAAATCATTCTAATTATTAGAGAATTCACATCTCTTAGGGAAACCTAACAAATATTTAATTTAAAAGTAACTCAAACAACCCTGAATTTGCTACAAAAATCAAAATGGAGAAAAGTATCACGTACCAAAGAGTCGAAGGCCCATTAATTTAGGCAAAATATGATGACTGGTGTGATAATATAGGCAATGAAATCTCGATCAACTGAAAGTCTTGAATTCTTGTCACTAGTGGACATACATTTAAACACTTAATAGATTAGTTGTGACACTTGCCTATCCTATTACAAACTTACGATGCAGAGATCATGATGCATTCCACGTAGGAAGCTTCCCTTGCGACTGAATTTGGGAGTGAAAAATTTATAGTTCTTTCTCATTGCCTGTTCATCTAAATATCAAAATTGTCGTTATCTTTCAGTATTCTATCAACATTTTTCATTGCTCCCTTCTTACATTTAGAGTTATCAAGATAGCTCTATTGAATCTCTGACTCTTGACTATATCAATAAAATTATTTATCTTAATGTAGAAATATGTACCCATTTTAATTAATTAGTTTGTTTTATTTGTATGAGGTGAAAATATTTCCTCTGTAGTATAGGAATTGATTAAGTTCAGAGATGGCCTTAATATCTGACCAACTATTGAGTTGTTCAATTCAAACGGAAAGCGTGTAAGCTATAAATGGTTGGGTTATTCATTCCTTTGAACTTCTATTTTGTAGGACAATACCTTTTGCCTGGAATCTCTTAACTGCTGGTTATGTTGAACAGTCAGTATATGGGGTATGCACTCACATTTTCACACACTATATTTTGTTTCATTTACAATAACAATTAGAATTTATCTCACTATTTTAAGTGAGTCTCCACTAGAAGTTCGACTCATTGAGAGACATATATTGCAGGTTGTTGTCAGCACAGTTGGTCTTCTTTTTGTTGGGAAGCTGCTTGAACCCATATGGGGCTCTAGAGAATTTTTGAAGTTCATCTTTATAGTCAATTTTCTAACTTCTTTATGTGTTTTTATCACAGCGATTGCCCTGTACTATATTACGCAGGAGGAAATTTATCTGTAAGTGCTACTGAGTCCTCGTGCATCAGTGGCACCATTTAGGCGTACATGTGTTCATGTCTTTAGCTGATAGATCATTCTGCGGGTTTCATCACTTAAGGCTGTTTTAATCCAATTTGATTTTTGTTTAAATCAATTTTGTCTGATTCCTTCCCTTTATCAAGTCCTTTTTAAGCCATGTTTCGTGTCTGCTTTGCCTCTCAGGCTTTCCAGACATCTTATTTACATCTTTTTGTGGTCTCAGTTATTTCCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTACCTGTACTGAAACTAAGAGCTAAGGTATGAAATATGTAGTTAGGTATATCCATATTTCAAATAATTTTTATCAGAGTTTTATTTGAACCTCATCTGATCTTTTGCTTCCAATTTCATGCAGTGGTTACCGTCTCTTGCTGTATTTGTATCCATTGCTGTAAGCTTTTGGACAACTGGGGCAGCAACATATCTTCCAACAATAATATTTGGGACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGATCCAAGTGATGATTTTGCATTCTCTACATTCTTCCCTGAACTTTTACGGTATACTGTTTTATTTTGAAGCCTTTTCTATTTTTAAGCTTCTCTTTCCCATGTTTCAGGAATATTCTGTGTTCTCTCTCTCCATAGTCCATACTGTACTCTGAGTCTTGATGGTTTTGTGCAGGCCAGTCATCGATCCAGTTGCATCAGTATTTCATCGTCTTCTTTGTGGAAGATCTGAATCCCCTAACAATGCTGAGGACTATACTGCTGGAGGCACCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGAAGGAGGTAATATTTGTTAATGCTTTTCTCCTGGCTCATAAACTTGATCATACTACATGTGTTTTCCACTTTTAGCGTGTTCTATAGTTTGCAGCAGGAACTGATTTTTAGTAACTATTTTTGTTTTAAATGGTTTGAGGTAGACAGGACAGGACAGAACAAAAAATTACAACAAGATGAAAGAGTTTTAAATTTAAATTTTAAACATATCCTTTTAAATTTTCTTTTGGGGGCAAATTAGGGCTTCTAAATTTGTTTTATCATCTAGAAATTAGGGGCTAAATTTAAAGTTAAAATTTTGTATGAACAATTTTCAGTTTCAAGTATTGATTTCCCCTCACCTAACGATTATGCATCTACCTGCGTGGTGACGTTTCTCTCATTATTTGCATCCTTTGCTCGTCTATTGGCTTTGTCTGCACAAGTTGTTGCCCTATTAATCACCCACATTGAAGAACATTGTTGTCAGAACTTTTTCAGAAAGAAAAACCATACAAAGGGGGGTGACAGGGTGTCAACTCATAAGGAAATCTAGAGGAGAGAATAGTAAAGAATGTTATAAACATAAAGGAAATGTGTGTAACAAAAAAAAATAATAATAATAAATAAATAAAGGACTTAGAGGAGAGGAGAGAATACTCTATAAAATTTAAACACTCTACTCGTTGCAGAGAACGGGGAGCTAGAGCTTTGGAAGAAAGACTGGCTGCTGAGAGACTGGCTGCAGCCAGAAGTGCTCAAGAGTCAGGAAGGGATGCAACGGATAGCGTCTGATTGATTATATGTGGTCATCTGCTAGGGCCTATGTTTGTTGATTAACTTGGGGACTGTGCAGTACATCAAGAGGTCCTCTTTTCTTTTTTCTAAGATACAATTTTGTTTTGCACATTTCCTTATGTNGTTGCTTCGTTTGTGCTTTGCAGCATTGGGGATTTTATCTGTATACAGCCGGATATATATATATATATATATATATACGAGTAGAATTTCATCAAGTTTTTTCCACTGCTCTGCTTGGAATGTTGGAGATGGTTAAAATCACTTTCGAACATATTTTTAACTATTTGAAAGCATTTTTTTCTCCTTTTTACTTTGTGAATTTTAATTTGAATCCTTTATTGGGAATCTAACCAGATTAGCTGCAAACCAGACTTGGTCCAGATGAAGTAACTTTCAAGATTCAAGGTAATCTATCATTTATGTGTGTGTTTGACGCGTTTTCTTCTATCATAATGATCTAATTAGATTGGCAAACTTTACACATGTCGCTATTGAATGTTGAGTAATTTTCAAAGGCAAAAAAGAAAGCAATAGTGCGACATTGTGATAAAAAGTAGAGAGGCTTCATCATGCACTTTAAAGTAGCCTATGATTACAGCATAAAAAGAAAGCCCTGAAAATACCCATTCCCTTTCACTGGAATCGAAAAACACTAGGAATTTTCTAGCTCTAGGAAACCAACACTGATAGAAGATGGGATTTCAACAGTTAGTATAGCTCCTTCCTGTCCTCCAACCATCTCCGCCTGCAAGAACAGAAGTTGTAAGACAAGCTTCACTCATCAAGTATAATGCTAAATAAACACGAACGTTCAAAGATACCGGTAGATTACTACTTACATCTTGTGATCCCATGTGGGTTGAATTTTGATCATACGATTCTCGCCATGTGCGTAATCAGTTTGAACTCGTTTGGTGTTTCGAAACGCACAACAACCGATAGAGTAAACGGCAATGAGAAAAATGAGCATGACAATATTGAGAACTGAGAGCTTATGCCAGTCCCTTCTTGCAGTCTCAAGCACACCTGCTTTGCATGAAATGCAGTCATAGCACAGCACGTTGGGTGCCCCATTCCACCGGTAGCAATCGGGATCTTGAACGTTCTCGGTGCATGAAGCCGGTGGCTTGCAGCACCCCGCCTGCAACCAAAATTTTGACTTGTTTAAGTTTGATCATAGAACCAGCAAGTGTATTGAAAATTTAGGAGAGTACCTGAATGGGAGTTATCTGTCTCTGTAAATAATTAAGAGGAGTCCAAGAAGAAACCTGGTTGCAAGTATTAGACCCCAAAATGCAGCTCTTAATAGTGCCCCAATACTGAGGATTATTAACTCTATTCCTTAACCATACAGAGTAATCCCCAAACCGATGCTCGCCTCCATCGCCGCCGCCGCCGCCTTTGCTGGCGACGACGAGGCCGAAGAGGGTGAAGCCCAAAAGCGTAGCAATGAGCAGCAACATGGCGAACAAATAGAGCCATAGTGCCCAAGTAACGTTGAAACAGGCCCCCACGAACCCCGCCAGTGAAATCAAAAGCACCAAAAACCCGAGCACCAGCAGCGGCGTCTGCAGAAACGCCTCGCAGGTGGTGCTGTTCCTAGCCATCCACAGGGCTCCCCCTATGATCGGGATTGACCCTAACAGCGTTAAGAAGTTCAGTAGCCCGATCACTGAGTTGCTCAATTTGTTCATTTCTAATGATTCTTGGGTTTGGTTGTTGTGGGAGTTTCGTTTCTTAAATGGAGGGAAAATTTATTGCTTTTTTCCTTGGTCCTCCTCAGCTTTTAAGTTGGCCTATAAATTGTCTCTAAATACTTTTAAAAATGTACCAGCTTTTAAGACAGCATGCCT

mRNA sequence

GTGTAGCGTTGTACACTACACCTCACCACACCCAATAACCCACATCTCTACGTTTCGGCTCACTCTCTCTTTAACCCAAAAGTCTCAGGCGAAGCAAAACAATCCATTTTGATCCCGCAACTCCGATCACCGTCATCCACTGTCCGCCGTCTCCGCCCATGAGTACTCCAGCAGTTCCGGGGAGCTCTGGTTTGTTTACTGGATTCACCAAGCTATGCAAGGGCTTGGCCGTCGTGCTAATTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGCTGTTAACTATCTTGCTCTTATTCCATCCAGGACAATACCTTTTGCCTGGAATCTCTTAACTGCTGGTTATGTTGAACAGTCAGTATATGGGGTTGTTGTCAGCACAGTTGGTCTTCTTTTTGTTGGGAAGCTGCTTGAACCCATATGGGGCTCTAGAGAATTTTTGAAGTTCATCTTTATAGTCAATTTTCTAACTTCTTTATGTGTTTTTATCACAGCGATTGCCCTGTACTATATTACGCAGGAGGAAATTTATCTTTATTTCCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTACCTGTACTGAAACTAAGAGCTAAGTGGTTACCGTCTCTTGCTGTATTTGTATCCATTGCTGTAAGCTTTTGGACAACTGGGGCAGCAACATATCTTCCAACAATAATATTTGGGACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGATCCAAGTGATGATTTTGCATTCTCTACATTCTTCCCTGAACTTTTACGGCCAGTCATCGATCCAGTTGCATCAGTATTTCATCGTCTTCTTTGTGGAAGATCTGAATCCCCTAACAATGCTGAGGACTATACTGCTGGAGGCACCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGAAGGAGAGAACGGGGAGCTAGAGCTTTGGAAGAAAGACTGGCTGCTGAGAGACTGGCTGCAGCCAGAAGTGCTCAAGAGTCAGGAAGGGATGCAACGGATAGCGTCTGATTGATTATATGTGGTCATCTGCTAGGGCCTATGTTTGTTGATTAACTTGGGGACTGTGCAGTACATCAAGAGATTAGCTGCAAACCAGACTTGGTCCAGATGAAGTAACTTTCAAGATTCAAGGTAATCTATCATTTATGTGTGTGTTTGACGCGTTTTCTTCTATCATAATGATCTAATTAGATTGGCAAACTTTACACATGTCGCTATTGAATGTTGAGTAATTTTCAAAGGCAAAAAAGAAAGCAATAGTGCGACATTGTGATAAAAAGTAGAGAGGCTTCATCATGCACTTTAAAGTAGCCTATGATTACAGCATAAAAAGAAAGCCCTGAAAATACCCATTCCCTTTCACTGGAATCGAAAAACACTAGGAATTTTCTAGCTCTAGGAAACCAACACTGATAGAAGATGGGATTTCAACAGTTAGTATAGCTCCTTCCTGTCCTCCAACCATCTCCGCCTGCAAGAACAGAAGTTGTAAGACAAGCTTCACTCATCAAGTATAATGCTAAATAAACACGAACGTTCAAAGATACCGGTAGATTACTACTTACATCTTGTGATCCCATGTGGGTTGAATTTTGATCATACGATTCTCGCCATGTGCGTAATCAGTTTGAACTCGTTTGGTGTTTCGAAACGCACAACAACCGATAGAGTAAACGGCAATGAGAAAAATGAGCATGACAATATTGAGAACTGAGAGCTTATGCCAGTCCCTTCTTGCAGTCTCAAGCACACCTGCTTTGCATGAAATGCAGTCATAGCACAGCACGTTGGGTGCCCCATTCCACCGGTAGCAATCGGGATCTTGAACGTTCTCGGTGCATGAAGCCGGTGGCTTGCAGCACCCCGCCTGCAACCAAAATTTTGACTTGTTTAAGTTTGATCATAGAACCAGCAAGTGTATTGAAAATTTAGGAGAGTACCTGAATGGGAGTTATCTGTCTCTGTAAATAATTAAGAGGAGTCCAAGAAGAAACCTGGTTGCAAGTATTAGACCCCAAAATGCAGCTCTTAATAGTGCCCCAATACTGAGGATTATTAACTCTATTCCTTAACCATACAGAGTAATCCCCAAACCGATGCTCGCCTCCATCGCCGCCGCCGCCGCCTTTGCTGGCGACGACGAGGCCGAAGAGGGTGAAGCCCAAAAGCGTAGCAATGAGCAGCAACATGGCGAACAAATAGAGCCATAGTGCCCAAGTAACGTTGAAACAGGCCCCCACGAACCCCGCCAGTGAAATCAAAAGCACCAAAAACCCGAGCACCAGCAGCGGCGTCTGCAGAAACGCCTCGCAGGTGGTGCTGTTCCTAGCCATCCACAGGGCTCCCCCTATGATCGGGATTGACCCTAACAGCGTTAAGAAGTTCAGTAGCCCGATCACTGAGTTGCTCAATTTGTTCATTTCTAATGATTCTTGGGTTTGGTTGTTGTGGGAGTTTCGTTTCTTAAATGGAGGGAAAATTTATTGCTTTTTTCCTTGGTCCTCCTCAGCTTTTAAGTTGGCCTATAAATTGTCTCTAAATACTTTTAAAAATGTACCAGCTTTTAAGACAGCATGCCT

Coding sequence (CDS)

ATGAGTACTCCAGCAGTTCCGGGGAGCTCTGGTTTGTTTACTGGATTCACCAAGCTATGCAAGGGCTTGGCCGTCGTGCTAATTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGCTGTTAACTATCTTGCTCTTATTCCATCCAGGACAATACCTTTTGCCTGGAATCTCTTAACTGCTGGTTATGTTGAACAGTCAGTATATGGGGTTGTTGTCAGCACAGTTGGTCTTCTTTTTGTTGGGAAGCTGCTTGAACCCATATGGGGCTCTAGAGAATTTTTGAAGTTCATCTTTATAGTCAATTTTCTAACTTCTTTATGTGTTTTTATCACAGCGATTGCCCTGTACTATATTACGCAGGAGGAAATTTATCTTTATTTCCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTACCTGTACTGAAACTAAGAGCTAAGTGGTTACCGTCTCTTGCTGTATTTGTATCCATTGCTGTAAGCTTTTGGACAACTGGGGCAGCAACATATCTTCCAACAATAATATTTGGGACATACATCAGCTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGATCCAAGTGATGATTTTGCATTCTCTACATTCTTCCCTGAACTTTTACGGCCAGTCATCGATCCAGTTGCATCAGTATTTCATCGTCTTCTTTGTGGAAGATCTGAATCCCCTAACAATGCTGAGGACTATACTGCTGGAGGCACCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGAAGGAGAGAACGGGGAGCTAGAGCTTTGGAAGAAAGACTGGCTGCTGAGAGACTGGCTGCAGCCAGAAGTGCTCAAGAGTCAGGAAGGGATGCAACGGATAGCGTCTGA

Protein sequence

MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLTAGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYITQEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFHRLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQESGRDATDSV

Homology

[Close]

BLAST of Cp4.1LG13g10020 vs. ExPASy Swiss-Prot
Match: Q8LF05 (Rhomboid-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RBL19 PE=2 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 7.2e-119
Identity = 212/302 (70.20%), Postives = 252/302 (83.44%), Query Frame = 0


Query: 7   PGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLTAGYVEQ 66
           PG+S +FT FTKLCKGLA+VL+ GH++VQ  PA V YLALIP+RTIPFAWNL+T+GY E 
Sbjct: 4   PGTS-MFTNFTKLCKGLALVLVVGHLVVQFIPATVPYLALIPARTIPFAWNLITSGYFEL 63

Query: 67  SVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYITQEEIYL 126
           SVYGVV STV LLF+GK LEP+WGS EFLKFIF+VNFLT LCVF+TAIALYYIT+ E+YL
Sbjct: 64  SVYGVVFSTVSLLFMGKFLEPVWGSTEFLKFIFVVNFLTYLCVFVTAIALYYITRLEVYL 123

Query: 127 YFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTGAATYLP 186
           Y P +GF+G+LAG LVGIKQIIPDQE+ +LK++AKWLPS+ + +SIA SF+T  +A YLP
Sbjct: 124 YMPFAGFHGVLAGLLVGIKQIIPDQEILLLKIKAKWLPSIMLILSIASSFFTLDSAAYLP 183

Query: 187 TIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFHRLLCGR 246
           T+IFGTY+ W+YLRY QR+PE KL+GDPSDDFAFSTFFPELLRPVIDP+A +FHR+LCGR
Sbjct: 184 TLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFHRMLCGR 243

Query: 247 SESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQESGRDATD 306
           S + +   DY+  G PLPGSD  EASRRRERGARALEERL  ERL  AR+  E   D  D
Sbjct: 244 SNATSEDHDYSTSGAPLPGSDSAEASRRRERGARALEERLGTERLVPARNKDELQSDGLD 303

Query: 307 SV 309
           +V
Sbjct: 304 NV 304

[Close]

BLAST of Cp4.1LG13g10020 vs. ExPASy Swiss-Prot
Match: Q9WUH1 (Transmembrane protein 115 OS=Mus musculus OX=10090 GN=Tmem115 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-29
Identity = 96/296 (32.43%), Postives = 152/296 (51.35%), Query Frame = 0


Query: 5   AVPGS----SGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIP---FAWN 64
           A+PG+      +    + + K L  V++  ++L   F      LA+ P    P   + W 
Sbjct: 4   ALPGARQHLGAILASASVVVKALCAVVLFLYLL--SFAVDTGCLAVTPGYLFPPNFWIWT 63

Query: 65  LLTAGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALY 124
           L T G +EQ V+ V +S   ++  G+LLEP+WG+ E L F  +VN    L   +  +  Y
Sbjct: 64  LATHGLMEQHVWDVAISLATVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGALAYLLTY 123

Query: 125 YITQEEIYLY-FPVSGFYGILAGFLVGIKQIIPD-QELPVLKLRAKWLPSLAVFVSIAVS 184
             +   +YL+   + G  G L G LV +KQ + D   L V ++R   +P L + + + + 
Sbjct: 124 MASFNLVYLFTIRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVVPMLLLALLLLLR 183

Query: 185 FWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPV 244
             T   +  L +  FG   SW+YLR++QR   ++ +GD +D FAF+TFFPE+L+PV+  +
Sbjct: 184 LATLLQSPALASYGFGLLSSWVYLRFYQR--HSRGRGDMADHFAFATFFPEILQPVVGLL 243

Query: 245 ASVFHRLLCGRSESPNNAEDYTAGG-----TPLPGSDPIEASRRRERGARALEERL 287
           A++ H LL          + Y  G        LPG+DP +A RRR+   +AL ERL
Sbjct: 244 ANLVHGLLVKVKICQKTVKRYDVGAPSSITISLPGTDPQDAERRRQLALKALNERL 295

[Close]

BLAST of Cp4.1LG13g10020 vs. ExPASy Swiss-Prot
Match: Q12893 (Transmembrane protein 115 OS=Homo sapiens OX=9606 GN=TMEM115 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.1e-29
Identity = 94/286 (32.87%), Postives = 145/286 (50.70%), Query Frame = 0


Query: 23  LAVVLIGGHILVQVFPAAVNY------------LALIPSRTIP---FAWNLLTAGYVEQS 82
           L  +L    ++V+   AAV +            LA+ P    P   + W L T G +EQ 
Sbjct: 12  LGAILASASVVVKALCAAVLFLYLLSFAVDTGCLAVTPGYLFPPNFWIWTLATHGLMEQH 71

Query: 83  VYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYITQEEIYLY 142
           V+ V +S   ++  G+LLEP+WG+ E L F  +VN    L      +  Y  +   +YL+
Sbjct: 72  VWDVAISLTTVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNLVYLF 131

Query: 143 -FPVSGFYGILAGFLVGIKQIIPD-QELPVLKLRAKWLPSLAVFVSIAVSFWTTGAATYL 202
              + G  G L G LV +KQ + D   L V ++R   +P L + + + +   T   +  L
Sbjct: 132 TVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVMPMLLLALLLLLRLATLLQSPAL 191

Query: 203 PTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFHRLLCG 262
            +  FG   SW+YLR++QR   ++ +GD +D FAF+TFFPE+L+PV+  +A++ H LL  
Sbjct: 192 ASYGFGLLSSWVYLRFYQR--HSRGRGDMADHFAFATFFPEILQPVVGLLANLVHSLLVK 251

Query: 263 RSESPNNAEDYTAGG-----TPLPGSDPIEASRRRERGARALEERL 287
                   + Y  G        LPG+DP +A RRR+   +AL ERL
Sbjct: 252 VKICQKTVKRYDVGAPSSITISLPGTDPQDAERRRQLALKALNERL 295

[Close]

BLAST of Cp4.1LG13g10020 vs. ExPASy Swiss-Prot
Match: A4FUB8 (Transmembrane protein 115 OS=Bos taurus OX=9913 GN=TMEM115 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-28
Identity = 95/296 (32.09%), Postives = 151/296 (51.01%), Query Frame = 0


Query: 5   AVPGS----SGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIP---FAWN 64
           A+PG+      + +  + + K L   ++  ++L   F      LA+ P    P   + W 
Sbjct: 4   ALPGARQHLGAILSSASVVVKALCAAVLFLYLL--SFAVDTGCLAVTPGYLFPPNFWIWT 63

Query: 65  LLTAGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALY 124
           L T G +EQ V+ V +S   ++  G+LLEP+WG+ E L F  +VN    L      +  Y
Sbjct: 64  LATHGLMEQHVWDVAISLATVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTY 123

Query: 125 YITQEEIYLY-FPVSGFYGILAGFLVGIKQIIPD-QELPVLKLRAKWLPSLAVFVSIAVS 184
             +   +YL+   + G  G L G LV +KQ + D   L V ++R   +P L + + + + 
Sbjct: 124 MASFNLVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVVPMLLLGLLLLLR 183

Query: 185 FWTTGAATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPV 244
             T   +  L +  FG   SW+YLR++QR   ++ +GD +D FAF+TFFPE+L+PV+  +
Sbjct: 184 LATLLQSPALASYGFGLISSWVYLRFYQR--HSRGRGDMADHFAFATFFPEILQPVVGLL 243

Query: 245 ASVFHRLLCGRSESPNNAEDYTAGG-----TPLPGSDPIEASRRRERGARALEERL 287
           A++ H LL          + Y  G        LPG+DP +A RRR+   +AL ERL
Sbjct: 244 ANLVHGLLVKVKICQKTVKRYDVGAPSSITISLPGTDPQDAERRRQLALKALNERL 295

[Close]

BLAST of Cp4.1LG13g10020 vs. ExPASy Swiss-Prot
Match: Q12239 (Transmembrane protein 115 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YOL107W PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 68/273 (24.91%), Postives = 127/273 (46.52%), Query Frame = 0


Query: 44  LALIPSRTIPFAWNLLTAGYVEQSVYGVVVSTVGLLFVGKLLEPIW-GSREFLKFIFIVN 103
           L ++PS+   +  +L+ + +++   + VVV+ + L+  G  +E  W  S+E  KFI ++ 
Sbjct: 68  LQMVPSQIWRYPTSLVLSNFIDTKAWKVVVNLLNLIIGGSFIERNWNSSKEMFKFIIVLG 127

Query: 104 FLTSLCVFITAIALYYITQEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLK----- 163
            LT++ + +  + + + +  ++ L  P+ G Y IL GF +  +Q++P+  +  LK     
Sbjct: 128 SLTNVLIIMLTLLVSFFS-NKVRLDIPLDGNYTILIGFPIIYRQLLPETTIIHLKTPQFL 187

Query: 164 ---LRAKWLPSLAVFVSIAVSFWTTGAATYLPTIIFGTYISWIYLRYWQRKP-------- 223
               R K LP   +F               L +I    + SW YLR++Q+          
Sbjct: 188 AKNFRFKLLPIFVMFTMTVTQIIWFHHFAQLFSIWVTFFASWSYLRFFQKLAPLNCPSLP 247

Query: 224 -------EAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFHRLLCGRSE--SPNNAEDYT 283
                  +  L GD SD F    FFP+L++P++ P+ +  + ++  + +   P +  D  
Sbjct: 248 TTNSQGGQEILVGDASDTFQLIYFFPDLIKPILRPIFNFIYNVVVVKFKVIKPFHDIDID 307

Query: 284 AGGT--PLPGSDPIEA--SRRRERGARALEERL 287
            G T     G+  I     RRR+   + LEER+
Sbjct: 308 IGNTIAESRGAKKIMTVEERRRQLALQVLEERM 339

[Close]

BLAST of Cp4.1LG13g10020 vs. NCBI nr
Match: XP_023551332.1 (rhomboid-like protein 19 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 595 bits (1534), Expect = 3.87e-214
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60

Query: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 308
           GRDATDSV
Sbjct: 301 GRDATDSV 308

[Close]

BLAST of Cp4.1LG13g10020 vs. NCBI nr
Match: XP_022993030.1 (rhomboid-like protein 19 [Cucurbita maxima])

HSP 1 Score: 588 bits (1516), Expect = 2.14e-211
Identity = 304/308 (98.70%), Postives = 306/308 (99.35%), Query Frame = 0


Query: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYI 
Sbjct: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIM 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAE+LAAAR AQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAEKLAAARIAQES 300

Query: 301 GRDATDSV 308
           GRDATDSV
Sbjct: 301 GRDATDSV 308

[Close]

BLAST of Cp4.1LG13g10020 vs. NCBI nr
Match: KAG6578756.1 (Rhomboid-like protein 19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 588 bits (1515), Expect = 3.04e-211
Identity = 305/308 (99.03%), Postives = 305/308 (99.03%), Query Frame = 0


Query: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60

Query: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSV GVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAV FWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFG YISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH
Sbjct: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 308
           GRDATDSV
Sbjct: 301 GRDATDSV 308

[Close]

BLAST of Cp4.1LG13g10020 vs. NCBI nr
Match: KAG7016283.1 (Rhomboid-like protein 19 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 586 bits (1511), Expect = 1.24e-210
Identity = 304/308 (98.70%), Postives = 304/308 (98.70%), Query Frame = 0


Query: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSG FTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60

Query: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSV GVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAV FWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFG YISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH
Sbjct: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 308
           GRDATDSV
Sbjct: 301 GRDATDSV 308

[Close]

BLAST of Cp4.1LG13g10020 vs. NCBI nr
Match: XP_022939647.1 (rhomboid-like protein 19 [Cucurbita moschata])

HSP 1 Score: 575 bits (1481), Expect = 3.85e-206
Identity = 299/308 (97.08%), Postives = 301/308 (97.73%), Query Frame = 0


Query: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPV+KLRAKWLPSLAVFVSIAVSFWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVVKLRAKWLPSLAVFVSIAVSFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFST FPELLRPVIDPVASV H
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTLFPELLRPVIDPVASVIH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAA     ARSAQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAA-----ARSAQES 300

Query: 301 GRDATDSV 308
           GRDATDSV
Sbjct: 301 GRDATDSV 303

[Close]

BLAST of Cp4.1LG13g10020 vs. ExPASy TrEMBL
Match: A0A6J1JXD8 (rhomboid-like protein 19 OS=Cucurbita maxima OX=3661 GN=LOC111489172 PE=4 SV=1)

HSP 1 Score: 588 bits (1516), Expect = 1.04e-211
Identity = 304/308 (98.70%), Postives = 306/308 (99.35%), Query Frame = 0


Query: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYI 
Sbjct: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIM 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAE+LAAAR AQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAEKLAAARIAQES 300

Query: 301 GRDATDSV 308
           GRDATDSV
Sbjct: 301 GRDATDSV 308

[Close]

BLAST of Cp4.1LG13g10020 vs. ExPASy TrEMBL
Match: A0A6J1FHE1 (rhomboid-like protein 19 OS=Cucurbita moschata OX=3662 GN=LOC111445478 PE=4 SV=1)

HSP 1 Score: 575 bits (1481), Expect = 1.86e-206
Identity = 299/308 (97.08%), Postives = 301/308 (97.73%), Query Frame = 0


Query: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPV+KLRAKWLPSLAVFVSIAVSFWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVVKLRAKWLPSLAVFVSIAVSFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFST FPELLRPVIDPVASV H
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTLFPELLRPVIDPVASVIH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAA     ARSAQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAA-----ARSAQES 300

Query: 301 GRDATDSV 308
           GRDATDSV
Sbjct: 301 GRDATDSV 303

[Close]

BLAST of Cp4.1LG13g10020 vs. ExPASy TrEMBL
Match: A0A6J1C1K7 (rhomboid-like protein 19 OS=Momordica charantia OX=3673 GN=LOC111006580 PE=4 SV=1)

HSP 1 Score: 565 bits (1457), Expect = 1.02e-202
Identity = 287/308 (93.18%), Postives = 297/308 (96.43%), Query Frame = 0


Query: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPG SGLFTGFTKLCKGLAVVL+GGHILVQ FPA VNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGGSGLFTGFTKLCKGLAVVLVGGHILVQFFPAVVNYLALIPTRTIPFAWNLLT 60

Query: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSVYGVV ST+GLLFVGKLLEPIWGSREFLKFIF+VNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVYGVVASTIGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180
           QEE YLY P+SGFYGILAGFLVGIKQIIPDQELP+LKLRAKWLPSLA+ VSIAVSFWT G
Sbjct: 121 QEESYLYMPISGFYGILAGFLVGIKQIIPDQELPLLKLRAKWLPSLALLVSIAVSFWTVG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVAS+FH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASIFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSES NNA+DYT GG PLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RLLCGRSESSNNADDYTVGGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 308
           GRDATD+V
Sbjct: 301 GRDATDNV 308

[Close]

BLAST of Cp4.1LG13g10020 vs. ExPASy TrEMBL
Match: A0A5D3C5G3 (Rhomboid-like protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00860 PE=4 SV=1)

HSP 1 Score: 560 bits (1444), Expect = 9.76e-201
Identity = 283/308 (91.88%), Postives = 299/308 (97.08%), Query Frame = 0


Query: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPG SG FTGFTKLCKGLAVVLIGGHILVQ+FPA VNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGGSGSFTGFTKLCKGLAVVLIGGHILVQLFPAVVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGY+EQS+YGVVVSTVGLLFVGKLLEPIWGSREFLKFIF+VNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYIEQSIYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180
           QEE YLY PVSGFYGILAGFLVGIKQ+IPDQELPVLKL+AKWLPS+AV VSIA+SFWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPVLKLKAKWLPSVAVLVSIAISFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDP+AS+FH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           R+LCGRSES +NAEDYTA G PLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RMLCGRSESRDNAEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 308
           G+DAT++V
Sbjct: 301 GKDATENV 308

[Close]

BLAST of Cp4.1LG13g10020 vs. ExPASy TrEMBL
Match: A0A0A0KQN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G491820 PE=4 SV=1)

HSP 1 Score: 560 bits (1444), Expect = 9.76e-201
Identity = 281/308 (91.23%), Postives = 299/308 (97.08%), Query Frame = 0


Query: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTP+VPG SG FTGFTKLCKG+AVVLIGGHILVQ+FP  VNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPSVPGGSGSFTGFTKLCKGIAVVLIGGHILVQLFPVVVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGY+EQS+YGVVVSTVGLLFVGKLLEPIWGSREFLKFIF+VNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYIEQSIYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180
           QEE YLY PVSGFYGILAGFLVGIKQ+IPDQELPVLKL+AKWLPSLAV +SIAVSFWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPVLKLKAKWLPSLAVLLSIAVSFWTTG 180

Query: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDP+AS+FH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           R+LCGRSESP+NAEDYTA G PLPGSDP+EASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RMLCGRSESPDNAEDYTAAGAPLPGSDPVEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 308
           G+DAT++V
Sbjct: 301 GKDATENV 308

[Close]

BLAST of Cp4.1LG13g10020 vs. TAIR 10
Match: AT3G07950.1 (rhomboid protein-related )

HSP 1 Score: 428.3 bits (1100), Expect = 5.1e-120
Identity = 212/302 (70.20%), Postives = 252/302 (83.44%), Query Frame = 0


Query: 7   PGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLTAGYVEQ 66
           PG+S +FT FTKLCKGLA+VL+ GH++VQ  PA V YLALIP+RTIPFAWNL+T+GY E 
Sbjct: 4   PGTS-MFTNFTKLCKGLALVLVVGHLVVQFIPATVPYLALIPARTIPFAWNLITSGYFEL 63

Query: 67  SVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYITQEEIYL 126
           SVYGVV STV LLF+GK LEP+WGS EFLKFIF+VNFLT LCVF+TAIALYYIT+ E+YL
Sbjct: 64  SVYGVVFSTVSLLFMGKFLEPVWGSTEFLKFIFVVNFLTYLCVFVTAIALYYITRLEVYL 123

Query: 127 YFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTGAATYLP 186
           Y P +GF+G+LAG LVGIKQIIPDQE+ +LK++AKWLPS+ + +SIA SF+T  +A YLP
Sbjct: 124 YMPFAGFHGVLAGLLVGIKQIIPDQEILLLKIKAKWLPSIMLILSIASSFFTLDSAAYLP 183

Query: 187 TIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFHRLLCGR 246
           T+IFGTY+ W+YLRY QR+PE KL+GDPSDDFAFSTFFPELLRPVIDP+A +FHR+LCGR
Sbjct: 184 TLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFHRMLCGR 243

Query: 247 SESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQESGRDATD 306
           S + +   DY+  G PLPGSD  EASRRRERGARALEERL  ERL  AR+  E   D  D
Sbjct: 244 SNATSEDHDYSTSGAPLPGSDSAEASRRRERGARALEERLGTERLVPARNKDELQSDGLD 303

Query: 307 SV 309
           +V
Sbjct: 304 NV 304

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g10020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LF05	7.2e-119	70.20	Rhomboid-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RBL19 PE=2 SV=1	[more]
Q9WUH1	1.8e-29	32.43	Transmembrane protein 115 OS=Mus musculus OX=10090 GN=Tmem115 PE=1 SV=1	[more]
Q12893	3.1e-29	32.87	Transmembrane protein 115 OS=Homo sapiens OX=9606 GN=TMEM115 PE=1 SV=1	[more]
A4FUB8	1.2e-28	32.09	Transmembrane protein 115 OS=Bos taurus OX=9913 GN=TMEM115 PE=2 SV=1	[more]
Q12239	1.1e-13	24.91	Transmembrane protein 115 homolog OS=Saccharomyces cerevisiae (strain ATCC 20450...	[more]

BLAST of Cp4.1LG13g10020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551332.1	3.87e-214	100.00	rhomboid-like protein 19 [Cucurbita pepo subsp. pepo]	[more]
XP_022993030.1	2.14e-211	98.70	rhomboid-like protein 19 [Cucurbita maxima]	[more]
KAG6578756.1	3.04e-211	99.03	Rhomboid-like protein 19, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7016283.1	1.24e-210	98.70	Rhomboid-like protein 19 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022939647.1	3.85e-206	97.08	rhomboid-like protein 19 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG13g10020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JXD8	1.04e-211	98.70	rhomboid-like protein 19 OS=Cucurbita maxima OX=3661 GN=LOC111489172 PE=4 SV=1	[more]
A0A6J1FHE1	1.86e-206	97.08	rhomboid-like protein 19 OS=Cucurbita moschata OX=3662 GN=LOC111445478 PE=4 SV=1	[more]
A0A6J1C1K7	1.02e-202	93.18	rhomboid-like protein 19 OS=Momordica charantia OX=3673 GN=LOC111006580 PE=4 SV=...	[more]
A0A5D3C5G3	9.76e-201	91.88	Rhomboid-like protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0KQN7	9.76e-201	91.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G491820 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g10020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07950.1	5.1e-120	70.20	rhomboid protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01160	DUF1751_2	coord: 48..146 e-value: 1.7E-44 score: 163.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..277
None	No IPR available	PANTHER	PTHR13377:SF9	RHOMBOID-LIKE PROTEIN 19	coord: 9..308
IPR013861	TMEM115/Pdh1/Rbl19	PFAM	PF08551	DUF1751	coord: 48..146 e-value: 1.3E-32 score: 112.3
IPR013861	TMEM115/Pdh1/Rbl19	PANTHER	PTHR13377	PLACENTAL PROTEIN 6	coord: 9..308
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 16..211 e-value: 8.7E-7 score: 30.7
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 19..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g10020.1	Cp4.1LG13g10020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane