Cp4.1LG13g09480 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g09480
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Protein of unknown function, DUF547
Location	Cp4.1LG13: 7536030 .. 7536311 (+)
RNA-Seq Expression	Cp4.1LG13g09480
Synteny	Cp4.1LG13g09480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGAGCTGGGGTTGGCAAAAGTGGAGTATTTGGAAGCATCAGTGGGGATGACAAGCAAGAAGAAGATAATGGTGCCAAAGCTTCTTGAATGGCACATGAAAGACTTTGCAGACGACATGGAATCGATGTTGGAATGGATTTATAGCCAACTTCCGGGCTCTGCAAGCTTGAAGAGGTTAATAATGGAGTGTTTGAATGGCGAAACTAAGTCTCCTATCAAGAAAATGGTGGAAATTCAACCTTATGAATCCGAGTTTCGTTACTTGCTACCCATGTAA

mRNA sequence

ATGAACGAGCTGGGGTTGGCAAAAGTGGAGTATTTGGAAGCATCAGTGGGGATGACAAGCAAGAAGAAGATAATGGTGCCAAAGCTTCTTGAATGGCACATGAAAGACTTTGCAGACGACATGGAATCGATGTTGGAATGGATTTATAGCCAACTTCCGGGCTCTGCAAGCTTGAAGAGGTTAATAATGGAGTGTTTGAATGGCGAAACTAAGTCTCCTATCAAGAAAATGGTGGAAATTCAACCTTATGAATCCGAGTTTCGTTACTTGCTACCCATGTAA

Coding sequence (CDS)

ATGAACGAGCTGGGGTTGGCAAAAGTGGAGTATTTGGAAGCATCAGTGGGGATGACAAGCAAGAAGAAGATAATGGTGCCAAAGCTTCTTGAATGGCACATGAAAGACTTTGCAGACGACATGGAATCGATGTTGGAATGGATTTATAGCCAACTTCCGGGCTCTGCAAGCTTGAAGAGGTTAATAATGGAGTGTTTGAATGGCGAAACTAAGTCTCCTATCAAGAAAATGGTGGAAATTCAACCTTATGAATCCGAGTTTCGTTACTTGCTACCCATGTAA

Protein sequence

MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKRLIMECLNGETKSPIKKMVEIQPYESEFRYLLPM

Homology

[Close]

BLAST of Cp4.1LG13g09480 vs. NCBI nr
Match: KAG7016230.1 (hypothetical protein SDJN02_21336, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187 bits (476), Expect = 4.67e-56
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           +NELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR
Sbjct: 302 VNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 361

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 93
           LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM
Sbjct: 362 LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 394

[Close]

BLAST of Cp4.1LG13g09480 vs. NCBI nr
Match: XP_022938374.1 (uncharacterized protein LOC111444641 [Cucurbita moschata])

HSP 1 Score: 187 bits (476), Expect = 3.80e-55
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           +NELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR
Sbjct: 396 VNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 455

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 93
           LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM
Sbjct: 456 LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 488

[Close]

BLAST of Cp4.1LG13g09480 vs. NCBI nr
Match: XP_023550198.1 (uncharacterized protein LOC111808448 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189 bits (480), Expect = 3.93e-55
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR
Sbjct: 470 MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 529

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 93
           LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM
Sbjct: 530 LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 562

[Close]

BLAST of Cp4.1LG13g09480 vs. NCBI nr
Match: KAG6578691.1 (hypothetical protein SDJN03_23139, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187 bits (476), Expect = 4.47e-55
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           +NELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR
Sbjct: 404 VNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 463

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 93
           LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM
Sbjct: 464 LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 496

[Close]

BLAST of Cp4.1LG13g09480 vs. NCBI nr
Match: XP_022992692.1 (uncharacterized protein LOC111488956 [Cucurbita maxima])

HSP 1 Score: 187 bits (476), Expect = 1.49e-54
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           +NELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR
Sbjct: 469 VNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 528

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 93
           LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM
Sbjct: 529 LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 561

[Close]

BLAST of Cp4.1LG13g09480 vs. ExPASy TrEMBL
Match: A0A6J1FDW5 (uncharacterized protein LOC111444641 OS=Cucurbita moschata OX=3662 GN=LOC111444641 PE=4 SV=1)

HSP 1 Score: 187 bits (476), Expect = 1.84e-55
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           +NELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR
Sbjct: 396 VNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 455

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 93
           LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM
Sbjct: 456 LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 488

[Close]

BLAST of Cp4.1LG13g09480 vs. ExPASy TrEMBL
Match: A0A6J1JQL7 (uncharacterized protein LOC111488956 OS=Cucurbita maxima OX=3661 GN=LOC111488956 PE=4 SV=1)

HSP 1 Score: 187 bits (476), Expect = 7.22e-55
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           +NELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR
Sbjct: 469 VNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 528

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 93
           LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM
Sbjct: 529 LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 561

[Close]

BLAST of Cp4.1LG13g09480 vs. ExPASy TrEMBL
Match: A0A6J1JR78 (uncharacterized protein LOC111487111 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487111 PE=4 SV=1)

HSP 1 Score: 177 bits (450), Expect = 2.66e-51
Identity = 86/93 (92.47%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           +NELG+AKVEYLEASVGMTSKKKIMVPKLL+WHMKDFADDMES+LEWIYSQLP SASLKR
Sbjct: 436 VNELGMAKVEYLEASVGMTSKKKIMVPKLLQWHMKDFADDMESLLEWIYSQLPRSASLKR 495

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 93
           LIMECLNGETKSPI KMVEIQPYESEFRYLLP+
Sbjct: 496 LIMECLNGETKSPIPKMVEIQPYESEFRYLLPI 528

[Close]

BLAST of Cp4.1LG13g09480 vs. ExPASy TrEMBL
Match: A0A6J1JSC3 (uncharacterized protein LOC111487111 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487111 PE=4 SV=1)

HSP 1 Score: 177 bits (450), Expect = 2.75e-51
Identity = 86/93 (92.47%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           +NELG+AKVEYLEASVGMTSKKKIMVPKLL+WHMKDFADDMES+LEWIYSQLP SASLKR
Sbjct: 438 VNELGMAKVEYLEASVGMTSKKKIMVPKLLQWHMKDFADDMESLLEWIYSQLPRSASLKR 497

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 93
           LIMECLNGETKSPI KMVEIQPYESEFRYLLP+
Sbjct: 498 LIMECLNGETKSPIPKMVEIQPYESEFRYLLPI 530

[Close]

BLAST of Cp4.1LG13g09480 vs. ExPASy TrEMBL
Match: A0A0A0KUA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517190 PE=4 SV=1)

HSP 1 Score: 175 bits (444), Expect = 1.88e-50
Identity = 84/93 (90.32%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           +NELGLAKVEYLEASVGMTSKKKIMVPKLL+WHMKDFADDMES+LEWIYSQLP SA+LKR
Sbjct: 432 VNELGLAKVEYLEASVGMTSKKKIMVPKLLQWHMKDFADDMESLLEWIYSQLPRSATLKR 491

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 93
            IMECLNGETKSP+ KMVEIQPY+SEFRYLLPM
Sbjct: 492 SIMECLNGETKSPVNKMVEIQPYDSEFRYLLPM 524

[Close]

BLAST of Cp4.1LG13g09480 vs. TAIR 10
Match: AT2G39690.1 (Protein of unknown function, DUF547 )

HSP 1 Score: 135.2 bits (339), Expect = 2.7e-32
Identity = 64/93 (68.82%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           +N+LG A+VEYLEASVG++SKKKI+VP+LL+WHMKDFADD+ES+LEWIYSQLP S +LK 
Sbjct: 406 VNDLGRARVEYLEASVGVSSKKKIVVPQLLQWHMKDFADDIESLLEWIYSQLPRSGNLKG 465

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 94
           +IMECL  + K P+ K+VEIQ Y  EFRYLL +
Sbjct: 466 MIMECLKRKAKVPLAKIVEIQTYGHEFRYLLSL 498

[Close]

BLAST of Cp4.1LG13g09480 vs. TAIR 10
Match: AT2G39690.2 (Protein of unknown function, DUF547 )

HSP 1 Score: 135.2 bits (339), Expect = 2.7e-32
Identity = 64/93 (68.82%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKR 60
           +N+LG A+VEYLEASVG++SKKKI+VP+LL+WHMKDFADD+ES+LEWIYSQLP S +LK 
Sbjct: 326 VNDLGRARVEYLEASVGVSSKKKIVVPQLLQWHMKDFADDIESLLEWIYSQLPRSGNLKG 385

Query: 61  LIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 94
           +IMECL  + K P+ K+VEIQ Y  EFRYLL +
Sbjct: 386 MIMECLKRKAKVPLAKIVEIQTYGHEFRYLLSL 418

[Close]

BLAST of Cp4.1LG13g09480 vs. TAIR 10
Match: AT3G12540.1 (Protein of unknown function, DUF547 )

HSP 1 Score: 92.0 bits (227), Expect = 2.6e-19
Identity = 45/96 (46.88%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 1   MNELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSA---S 60
           +NEL  A+ EYLEAS+G++ +KKI++P+ L   ++DFA+D  S++EWI SQLP +     
Sbjct: 410 VNELIKARTEYLEASIGVSGRKKIVIPRFLHKRLRDFAEDEGSLIEWICSQLPPAQRCFQ 469

Query: 61  LKRLIMECLNGETKSPIKKMVEIQPYESEFRYLLPM 94
           LK   ME LN +++S +KK++E++ +E EFRYLL +
Sbjct: 470 LKETAMEGLNKKSESQLKKLIEVRSHEYEFRYLLAL 505

[Close]

BLAST of Cp4.1LG13g09480 vs. TAIR 10
Match: AT4G37080.2 (Protein of unknown function, DUF547 )

HSP 1 Score: 82.0 bits (201), Expect = 2.7e-16
Identity = 37/89 (41.57%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 3   ELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKRLI 62
           EL  AK +YL+ASVG++   K+M+PK+L+W++ DFA D+ES+L+W+  QLP    L+   
Sbjct: 522 ELEAAKRDYLQASVGISKNNKLMLPKVLDWYLLDFAKDLESLLDWVCLQLPD--KLREEA 581

Query: 63  MECLNGETKSPIKKMVEIQPYESEFRYLL 92
            +C+  + K  + ++V++ PY+  FR LL
Sbjct: 582 TKCMERKNKESLMELVQVVPYDFSFRLLL 608

[Close]

BLAST of Cp4.1LG13g09480 vs. TAIR 10
Match: AT4G37080.1 (Protein of unknown function, DUF547 )

HSP 1 Score: 82.0 bits (201), Expect = 2.7e-16
Identity = 37/89 (41.57%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 3   ELGLAKVEYLEASVGMTSKKKIMVPKLLEWHMKDFADDMESMLEWIYSQLPGSASLKRLI 62
           EL  AK +YL+ASVG++   K+M+PK+L+W++ DFA D+ES+L+W+  QLP    L+   
Sbjct: 509 ELEAAKRDYLQASVGISKNNKLMLPKVLDWYLLDFAKDLESLLDWVCLQLPD--KLREEA 568

Query: 63  MECLNGETKSPIKKMVEIQPYESEFRYLL 92
            +C+  + K  + ++V++ PY+  FR LL
Sbjct: 569 TKCMERKNKESLMELVQVVPYDFSFRLLL 595

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g09480 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG13g09480 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016230.1	4.67e-56	98.92	hypothetical protein SDJN02_21336, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022938374.1	3.80e-55	98.92	uncharacterized protein LOC111444641 [Cucurbita moschata]	[more]
XP_023550198.1	3.93e-55	100.00	uncharacterized protein LOC111808448 [Cucurbita pepo subsp. pepo]	[more]
KAG6578691.1	4.47e-55	98.92	hypothetical protein SDJN03_23139, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022992692.1	1.49e-54	98.92	uncharacterized protein LOC111488956 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG13g09480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDW5	1.84e-55	98.92	uncharacterized protein LOC111444641 OS=Cucurbita moschata OX=3662 GN=LOC1114446...	[more]
A0A6J1JQL7	7.22e-55	98.92	uncharacterized protein LOC111488956 OS=Cucurbita maxima OX=3661 GN=LOC111488956...	[more]
A0A6J1JR78	2.66e-51	92.47	uncharacterized protein LOC111487111 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JSC3	2.75e-51	92.47	uncharacterized protein LOC111487111 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0KUA6	1.88e-50	90.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517190 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g09480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39690.1	2.7e-32	68.82	Protein of unknown function, DUF547	[more]
AT2G39690.2	2.7e-32	68.82	Protein of unknown function, DUF547	[more]
AT3G12540.1	2.6e-19	46.88	Protein of unknown function, DUF547	[more]
AT4G37080.2	2.7e-16	41.57	Protein of unknown function, DUF547	[more]
AT4G37080.1	2.7e-16	41.57	Protein of unknown function, DUF547	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46248	EXPRESSED PROTEIN	coord: 1..92
None	No IPR available	PANTHER	PTHR46248:SF4	TERNARY COMPLEX FACTOR MIP1, LEUCINE-ZIPPER-RELATED	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g09480.1	Cp4.1LG13g09480.1	mRNA