Cp4.1LG13g09460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g09460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CASP-like protein
Location	Cp4.1LG13: 7480740 .. 7483253 (+)
RNA-Seq Expression	Cp4.1LG13g09460
Synteny	Cp4.1LG13g09460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGTGAACCAGTTAGAGATATTAAATTCATTAGCAATTACAAAAATGGAACCTAAAATGGGTACCAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACCTTCGTCTTCCTCCTAATTTCCATCATAGTTCTTGGAACCACTTCCAAGACCGTAGGAGATGACAAGGTTCAATTCCATAATGTCAATTCCTATAGGTATTTATTTATTTATTTATTTCCATTTATTTTCATTTATTTCTATTGGGTTTCATGATTTATTTATTATTATTATTAAATTTGAAAAAAAAAAAATCAAAATTTGAAGGTTTGCAATGGCGACGATCATCATTGGAGGAGCATTCAACCTCTTGCAAATAGCCTTAGCCCTTTATCGTCTCATAACCAAAACCGACGGCGGTGTTTTATTCGACTTCTTCGGTGATAAGGTTTTGTCGTACTTTCTGCTGGCGGGAGCGGCGGCGGCGCTGGGTTCTACCATAGACTTGAAGGCCAATATTGACTGGTTGAACTCGTTTTTCGACCAAGGCAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTCCTATGCAGTGCTGTGGTTTCTGTTCTTTCCTCTTTTGCCCTTTCTCACAAACCTACTTAGTTTTGTTTTTTATTTATTGCAAAATTCATAGCACAATCTTTGTCGGACACCCTTTTATCAAATTCTTTCTCGTTTCATGTTCATGGAGTGTATTTTTCTAGGACACAATTTTTAAATCAAATTTAATTATTTGGATCCTAAATTATTTCAACTTAATCTAAAATTTATAACTAAATCAATCTATTATATTAAAGATAATATTAGGAGATATTTTAATTTTTATAGTGTAGAAATAAAAGGGGAATATTATCATGTTTAGATGTGTTTTTTTTTTTTTTTATAGCAATTTGAAATTATAATTAATTATTAAGATATTGCTCTACATTAAAGATATTAAATATCAATAATAGAACTAAATGGGCCCACATTCGTCTAAACTTTCAAACCGGCCCAACAAGAGTCTTTTGGCCCACATTCGTCTAAACTTTTAAAACGGCCCAACAAGAATCTTTCGGCCCACATTTGTCTGAACTTCTTTGATAAGTCATTTAACTTTTAAGAATTAAAATTAAAATTAAAAGTGTAGAGATTTTGGTTTTAAAATTTAAGAATTAATCTAAAAGATAAATAGATTATATCAAATTTCTTGATTTTATACCATATAAGTCTTTAAATATATAGTATTTTAGTTTAAATTTAATTACTTTATATAAAGAAGTGTATATATTTTTTTTTAATTTAACCAATGTTAACACCGTTCAAACGACTCGATGACTCAGTATTTTATTTAGGAAAAGTTTAAAGCAAGAAGAAATAATCTTAAAAGGAATATTTATGTTTATTTTTTAAAAAGTGTAGAGTTATTTTTTTAAAAATCATATTAATGTATTTAATTTGGGGAAAGATATTGTTGAAGAAAAAGAGTTATTTTATTAATTTGGAGGCAAAGAAGGGTTGAAACAAAGCTCAAATGAAATGAAAGGATTCGTCACACAAACTCACAATCAAAAAGTAAAAAAAGAAAAAAAAAACACACAGCTGAGGACAGGAAAAGAACATGAAAAAACCTGGGAAGAAACTAAGATTGTTTCATGTAAGCAGGTCGACCAAGAACGAGGCAAGAATCGTGGTGGGATCGCCAATAACGATACTGATAACTGTCTTGACGATGAATTTCATGACTCTCCAAAACTTCTCTATGCCTCCTCTCTCCACCTGCCGTCTTGCCTGAATCTCTCTCGGATTCAACCTCACAGCCACAGATTGCGTTCCACTAGTGGTGCTCCTCGTGCTACCGCCGCCGCCGCTTTGATTCTTGTACCATTCATCTAAAGCCATTTTAGTGACACAAGCGACATGAACATGATACTCCCCGCACTCCGACACGTACGACCATCCATTGTCCTCACCACCATCTTCAAGCCTCTCACTCTTGCACCACATACACTCCCCTGGTAAATATTACTTTCTATTTATAGTTAAATATCTTTGGTAATATTTGATGATTATAAATAAAGAATTTATTACCTTCCATTTTCCATTGGAGGTTAAACTTCACGTCTTCGATTTGGTAGCTTCTTTTAAGCTCACGGCAGCACGGGTGAATATCCGAATTATTTTCCTCACAGTGAAACACGAACCCTTTGATAGTCTTCCTGCAAGCGTTGCACCTAATTTTGCATTTTCGGTGGCAGGGTTTTGGTGGAATTCTCATGAACCTGAACCTCGAATTGGGGAAAAATTCATGCGAAACTGGCGCAATCCAGTCGTAAGTGCAGGGTTTATGTAGATCAAAATCGCACTTTTCGCATCGGTATCGTGGGCCGAACCCCTTCTCCTTGCACCCGTTACAGGTGTATGGCTCCATGTAGTTCTTCAGCTCTAGAACATGCCTCCGGTGGCTTGGATGATTTCGGAGAACCTCCTCCGTCGCCATTTCTCCTTGTTCAAGTA

mRNA sequence

AAAAGGTGAACCAGTTAGAGATATTAAATTCATTAGCAATTACAAAAATGGAACCTAAAATGGGTACCAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACCTTCGTCTTCCTCCTAATTTCCATCATAGTTCTTGGAACCACTTCCAAGACCGTAGGAGATGACAAGGTTCAATTCCATAATGTCAATTCCTATAGGTTTGCAATGGCGACGATCATCATTGGAGGAGCATTCAACCTCTTGCAAATAGCCTTAGCCCTTTATCGTCTCATAACCAAAACCGACGGCGGTGTTTTATTCGACTTCTTCGGTGATAAGGTTTTGTCGTACTTTCTGCTGGCGGGAGCGGCGGCGGCGCTGGGTTCTACCATAGACTTGAAGGCCAATATTGACTGGTTGAACTCGTTTTTCGACCAAGGCAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTCCTATGCAGTGCTGTGGTTTCTGTTCTTTCCTCTTTTGCCCTTTCTCACAAACCTACTTAGTTTTGTTTTTTATTTATTGCAAAATTCATAGCACAATCTTTGTCGGACACCCTTTTATCAAATTCTTTCTCGTTTCATGTTCATGGAGTGTATTTTTCTAGGACACAATTTTTAAATCAAATTTAATTATTTGGATCCTAAATTATTTCAACTTAATCTAAAATTTATAACTAAATCAATCTATTATATTAAAGATAATATTAGGAGATATTTTAATTTTTATAGTGTAGAAATAAAAGGGGAATATTATCATGTTTAGATGTGTTTTTTTTTTTTTTTATAGCAATTTGAAATTATAATTAATTATTAAGATATTGCTCTACATTAAAGATATTAAATATCAATAATAGAACTAAATGGGCCCACATTCGTCTAAACTTTCAAACCGGCCCAACAAGAGTCTTTTGGCCCACATTCGTCTAAACTTTTAAAACGGCCCAACAAGAATCTTTCGGCCCACATTTGTCTGAACTTCTTTGATAAGTCATTTAACTTTTAAGAATTAAAATTAAAATTAAAAGTGTAGAGATTTTGGTTTTAAAATTTAAGAATTAATCTAAAAGATAAATAGATTATATCAAATTTCTTGATTTTATACCATATAAGTCTTTAAATATATAGTATTTTAGTTTAAATTTAATTACTTTATATAAAGAAGTGTATATATTTTTTTTTAATTTAACCAATGTTAACACCGTTCAAACGACTCGATGACTCAGTATTTTATTTAGGAAAAGTTTAAAGCAAGAAGAAATAATCTTAAAAGGAATATTTATGTTTATTTTTTAAAAAGTGTAGAGTTATTTTTTTAAAAATCATATTAATGTATTTAATTTGGGGAAAGATATTGTTGAAGAAAAAGAGTTATTTTATTAATTTGGAGGCAAAGAAGGGTTGAAACAAAGCTCAAATGAAATGAAAGGATTCGTCACACAAACTCACAATCAAAAAGTAAAAAAAGAAAAAAAAAACACACAGCTGAGGACAGGAAAAGAACATGAAAAAACCTGGGAAGAAACTAAGATTGTTTCATGTAAGCAGGTCGACCAAGAACGAGGCAAGAATCGTGGTGGGATCGCCAATAACGATACTGATAACTGTCTTGACGATGAATTTCATGACTCTCCAAAACTTCTCTATGCCTCCTCTCTCCACCTGCCGTCTTGCCTGAATCTCTCTCGGATTCAACCTCACAGCCACAGATTGCGTTCCACTAGTGGTGCTCCTCGTGCTACCGCCGCCGCCGCTTTGATTCTTGTACCATTCATCTAAAGCCATTTTAGTGACACAAGCGACATGAACATGATACTCCCCGCACTCCGACACGTACGACCATCCATTGTCCTCACCACCATCTTCAAGCCTCTCACTCTTGCACCACATACACTCCCCTGGTTAAACTTCACGTCTTCGATTTGGTAGCTTCTTTTAAGCTCACGGCAGCACGGGGTTTTGGTGGAATTCTCATGAACCTGAACCTCGAATTGGGGAAAAATTCATGCGAAACTGGCGCAATCCAGTCGTAAGTGCAGGGTTTATGTAGATCAAAATCGCACTTTTCGCATCGGTATCGTGGGCCGAACCCCTTCTCCTTGCACCCGTTACAGGTGTATGGCTCCATGTAGTTCTTCAGCTCTAGAACATGCCTCCGGTGGCTTGGATGATTTCGGAGAACCTCCTCCGTCGCCATTTCTCCTTGTTCAAGTA

Coding sequence (CDS)

ATGGAACCTAAAATGGGTACCAAAATTGCTTCTTTTGTGCTCAGAGTTCTCACCTTCGTCTTCCTCCTAATTTCCATCATAGTTCTTGGAACCACTTCCAAGACCGTAGGAGATGACAAGGTTCAATTCCATAATGTCAATTCCTATAGGTTTGCAATGGCGACGATCATCATTGGAGGAGCATTCAACCTCTTGCAAATAGCCTTAGCCCTTTATCGTCTCATAACCAAAACCGACGGCGGTGTTTTATTCGACTTCTTCGGTGATAAGGTTTTGTCGTACTTTCTGCTGGCGGGAGCGGCGGCGGCGCTGGGTTCTACCATAGACTTGAAGGCCAATATTGACTGGTTGAACTCGTTTTTCGACCAAGGCAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTCCTATGCAGTGCTGTGGTTTCTGTTCTTTCCTCTTTTGCCCTTTCTCACAAACCTACTTAG

Protein sequence

MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGGAFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT

Homology

[Close]

BLAST of Cp4.1LG13g09460 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.0e-28
Identity = 70/154 (45.45%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 6   GTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDD--KVQFHNVNSYRFAMATIIIGGAFN 65
           G++    +LRVLTFVFLLI++I++    +T  +   +++F+++ +YR+ ++TIIIG A+N
Sbjct: 16  GSRTVLLLLRVLTFVFLLIALILIAIVKQTDDETGVEIKFNDIYAYRYMISTIIIGFAYN 75

Query: 66  LLQIALALYRLIT-----KTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLN 125
           LLQ+AL+++ +++       DGG LFDFFGDK++SY L++G+AA  G T++L   +   N
Sbjct: 76  LLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGRGVP-SN 135

Query: 126 SFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
           SF D+ NA+A+LLL+AFL +AV S  +SFAL  K
Sbjct: 136 SFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of Cp4.1LG13g09460 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.0e-28
Identity = 71/159 (44.65%), Postives = 109/159 (68.55%), Query Frame = 0


Query: 3   PKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDD----KVQFHNVNSYRFAMATIII 62
           P + +++A+ +LR+LTF+FL+ S+++L T + T+  D    KV F +V +YR+ +ATI+I
Sbjct: 6   PSLASRMAALILRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVI 65

Query: 63  GGAFNLLQIALALYRLIT-----KTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLK-- 122
           G A+ +LQIA  LY + T       DG + FDFFGDKV+SY L+ GAAA   ST D+K  
Sbjct: 66  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPV 125

Query: 123 -ANIDWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFAL 150
            +     ++F ++G A+A+LLL+ F+C+AV+SV SS+AL
Sbjct: 126 FSGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of Cp4.1LG13g09460 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 6.1e-26
Identity = 69/162 (42.59%), Postives = 106/162 (65.43%), Query Frame = 0


Query: 3   PKMGTKIASFVLRVLTFVFLLISIIVLGTTSKT----VGDDKVQFHNVNSYRFAMATIII 62
           P M +++ +  LRVLTF FL++S++++ T + T    + + KV+  +  SYR+ +A I  
Sbjct: 15  PSMVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGIDEFKVRSKDFYSYRYMLAAIAF 74

Query: 63  GGAFNLLQIALALYRLI------TKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKA 122
           G  + +LQIAL L  +       T  DG ++FDF+GDKV+SY L  GAAAA G+T +LK 
Sbjct: 75  GLTYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKT 134

Query: 123 NIDWL--NSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
            +  L  + FF++G A+A+LLLL F+C+A++SV SS+AL  K
Sbjct: 135 QLAGLGGDKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of Cp4.1LG13g09460 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-22
Identity = 66/149 (44.30%), Postives = 96/149 (64.43%), Query Frame = 0


Query: 11  SFVLRVLTFVFLLISIIVLGTTSKTV----GDDKVQFHNVNSYRFAMATIIIGGAFNLLQ 70
           S ++R+LT + LLIS IV+ T ++TV    GD K++F +  +YR+ +AT+IIG A+ LLQ
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTVSTVAGDVKIKFKDFYAYRYLIATVIIGMAYTLLQ 73

Query: 71  IALALYRLITKT----DGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLK--ANIDWLNSF 130
           IA ++  L T      +G +LFDF+GDK +SYFL+ GAAA+ G T DLK     D  + F
Sbjct: 74  IAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDLKQLEGSDNYSKF 133

Query: 131 FDQGNAAAALLLLAFLCSAVVSVLSSFAL 150
            +  NAAA+L L+ F  +   S+ SS+ L
Sbjct: 134 LNTSNAAASLCLIGFFFAVASSIFSSYNL 162

[Close]

BLAST of Cp4.1LG13g09460 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19
Identity = 61/165 (36.97%), Postives = 96/165 (58.18%), Query Frame = 0


Query: 3   PKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDD----KVQFHNVNSYRFAMATIII 62
           P +  K+   +LRVLT VFL+I++I+L T S T+       K  F +V +YR+ ++  +I
Sbjct: 9   PAVSLKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVI 68

Query: 63  GGAFNLLQIALALYRLIT--KTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLK----- 122
           G  + ++Q+   +    T  K       DF+GDK++SY +  G+AA  G T DLK     
Sbjct: 69  GLVYAVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLA 128

Query: 123 ----ANIDWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
                + D ++ FF +G A+A+LLL AF+C AV+SV SSFA++ +
Sbjct: 129 LVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Cp4.1LG13g09460 vs. NCBI nr
Match: XP_023551429.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290 bits (741), Expect = 2.29e-98
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGG 60
           MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGG
Sbjct: 1   MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120
           AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF
Sbjct: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT 154
           FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT
Sbjct: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT 154

[Close]

BLAST of Cp4.1LG13g09460 vs. NCBI nr
Match: XP_022992769.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 284 bits (726), Expect = 4.43e-96
Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGG 60
           ME KMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGD+K+QFHNVNSYRFAMATIIIGG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120
           AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF
Sbjct: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT 154
           FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT
Sbjct: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT 154

[Close]

BLAST of Cp4.1LG13g09460 vs. NCBI nr
Match: XP_022939465.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 282 bits (721), Expect = 2.57e-95
Identity = 149/154 (96.75%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGG 60
           ME KMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGD+K+QFHNVNSYRFAMATIIIGG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120
           AFNLLQIALALYRLITK+DGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF
Sbjct: 61  AFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT 154
           FDQGNAAAALLLLAFLCSA+VSVLSSFALSHKPT
Sbjct: 121 FDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT 154

[Close]

BLAST of Cp4.1LG13g09460 vs. NCBI nr
Match: KAG7016238.1 (CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261 bits (667), Expect = 2.51e-85
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 10  ASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGGAFNLLQIAL 69
           A  +  VLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGGAFNLLQIAL
Sbjct: 131 ALLLFAVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGGAFNLLQIAL 190

Query: 70  ALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSFFDQGNAAAA 129
           ALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSFFDQGNAAAA
Sbjct: 191 ALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSFFDQGNAAAA 250

Query: 130 LLLLAFLCSAVVSVLSSFALSHKPT 154
           LLLLAFLCSA+VSVLSSFALSHKPT
Sbjct: 251 LLLLAFLCSAIVSVLSSFALSHKPT 275

[Close]

BLAST of Cp4.1LG13g09460 vs. NCBI nr
Match: XP_008458887.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo])

HSP 1 Score: 255 bits (652), Expect = 8.47e-85
Identity = 132/153 (86.27%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 1   MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGG 60
           ME KM TKIASFVLRVLTFVFLL+SIIVLGT SKT+G+D+V FHNVNSYR+AMATIIIGG
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDEVHFHNVNSYRYAMATIIIGG 60

Query: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120
           AFNLLQIALALYRL+TKTDG +LFDF+GDKVLSYFLLAGAAAALGS++DLKAN+D LNSF
Sbjct: 61  AFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 153
           FDQGNAAAALLLLAFLCSA++SVLSS ALS+KP
Sbjct: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 153

[Close]

BLAST of Cp4.1LG13g09460 vs. ExPASy TrEMBL
Match: A0A6J1JYE7 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489007 PE=3 SV=1)

HSP 1 Score: 284 bits (726), Expect = 2.15e-96
Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGG 60
           ME KMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGD+K+QFHNVNSYRFAMATIIIGG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120
           AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF
Sbjct: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT 154
           FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT
Sbjct: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT 154

[Close]

BLAST of Cp4.1LG13g09460 vs. ExPASy TrEMBL
Match: A0A6J1FMS6 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445361 PE=3 SV=1)

HSP 1 Score: 282 bits (721), Expect = 1.24e-95
Identity = 149/154 (96.75%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGG 60
           ME KMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGD+K+QFHNVNSYRFAMATIIIGG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120
           AFNLLQIALALYRLITK+DGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF
Sbjct: 61  AFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKPT 154
           FDQGNAAAALLLLAFLCSA+VSVLSSFALSHKPT
Sbjct: 121 FDQGNAAAALLLLAFLCSAIVSVLSSFALSHKPT 154

[Close]

BLAST of Cp4.1LG13g09460 vs. ExPASy TrEMBL
Match: A0A1S3C911 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1)

HSP 1 Score: 255 bits (652), Expect = 4.10e-85
Identity = 132/153 (86.27%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 1   MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGG 60
           ME KM TKIASFVLRVLTFVFLL+SIIVLGT SKT+G+D+V FHNVNSYR+AMATIIIGG
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDEVHFHNVNSYRYAMATIIIGG 60

Query: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120
           AFNLLQIALALYRL+TKTDG +LFDF+GDKVLSYFLLAGAAAALGS++DLKAN+D LNSF
Sbjct: 61  AFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLNSF 120

Query: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 153
           FDQGNAAAALLLLAFLCSA++SVLSS ALS+KP
Sbjct: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 153

[Close]

BLAST of Cp4.1LG13g09460 vs. ExPASy TrEMBL
Match: A0A6J1BZ60 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006565 PE=3 SV=1)

HSP 1 Score: 193 bits (490), Expect = 1.81e-60
Identity = 106/149 (71.14%), Postives = 124/149 (83.22%), Query Frame = 0


Query: 5   MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGGAFNL 64
           MG+KIAS VLRV+TFVFL ISIIVL T S+      + FHNVNSYRFAMATIIIGGAFNL
Sbjct: 7   MGSKIASLVLRVVTFVFLFISIIVLATNSQ----GNIHFHNVNSYRFAMATIIIGGAFNL 66

Query: 65  LQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSFFDQG 124
           LQIAL+LY +I+K+ G +LF F+GDKVLSY LL+GAAA LG  IDL ANI+ + SFF +G
Sbjct: 67  LQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFGKG 126

Query: 125 NAAAALLLLAFLCSAVVSVLSSFALSHKP 153
           NAAAALLL+AFLCSA +S+LSS ALS+KP
Sbjct: 127 NAAAALLLIAFLCSAAISILSSLALSNKP 151

[Close]

BLAST of Cp4.1LG13g09460 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 158 bits (400), Expect = 1.22e-46
Identity = 87/163 (53.37%), Postives = 118/163 (72.39%), Query Frame = 0


Query: 1   MEPKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV-----GDDKVQFHNVNSYRFAMAT 60
           M    G++IAS +LR+LTFV + IS++++ T SKTV      + KV+F +V SYR+  A 
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  IIIGGAFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANID 120
            +IG A +LLQIAL LY ++TK+DG   FD F DK+L+Y LL+GA+A LG+ IDL++N  
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 WL-----NSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 153
            L     NSFFD+G+A+AA+LLLAF+CSAVVS+LSS AL  KP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of Cp4.1LG13g09460 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 61/165 (36.97%), Postives = 96/165 (58.18%), Query Frame = 0


Query: 3   PKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDD----KVQFHNVNSYRFAMATIII 62
           P +  K+   +LRVLT VFL+I++I+L T S T+       K  F +V +YR+ ++  +I
Sbjct: 9   PAVSLKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVI 68

Query: 63  GGAFNLLQIALALYRLIT--KTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLK----- 122
           G  + ++Q+   +    T  K       DF+GDK++SY +  G+AA  G T DLK     
Sbjct: 69  GLVYAVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLA 128

Query: 123 ----ANIDWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 153
                + D ++ FF +G A+A+LLL AF+C AV+SV SSFA++ +
Sbjct: 129 LVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Cp4.1LG13g09460 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 92.4 bits (228), Expect = 3.3e-19
Identity = 60/166 (36.14%), Postives = 98/166 (59.04%), Query Frame = 0


Query: 3   PKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTV----GDDKVQFHNVNSYRFAMATIII 62
           P +  +    +LRVLT  FLLI+++++ T + T+       K+ F++V +YR+ ++  +I
Sbjct: 9   PSVTLRTVLLLLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVI 68

Query: 63  GGAFNLLQIALALYRLITKTDGGVL--FDFFGDKVLSYFLLAGAAAALGSTIDLK----- 122
           G  + ++Q+ L + +  T     +   FDF+GDKV+SY L  G+AA  G + DLK     
Sbjct: 69  GLVYAVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIA 128

Query: 123 ----ANIDWLNSFFDQGNAAAALLLLAFLCSAVVSVLSSFALSHKP 154
                + D ++ FF +G A+A+LLL AF+  AV+SV SS ALS +P
Sbjct: 129 LIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g09460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C6T1Z6	1.0e-28	45.45	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9SXY8	5.0e-28	44.65	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
B9NBE5	6.1e-26	42.59	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
A1XGB4	1.4e-22	44.30	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]
Q56X75	1.5e-19	36.97	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]

BLAST of Cp4.1LG13g09460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551429.1	2.29e-98	100.00	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022992769.1	4.43e-96	98.05	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_022939465.1	2.57e-95	96.75	CASP-like protein 4D1 [Cucurbita moschata]	[more]
KAG7016238.1	2.51e-85	95.86	CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008458887.1	8.47e-85	86.27	PREDICTED: CASP-like protein 4D1 [Cucumis melo]	[more]

BLAST of Cp4.1LG13g09460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JYE7	2.15e-96	98.05	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489007 PE=3 SV=1	[more]
A0A6J1FMS6	1.24e-95	96.75	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445361 PE=3 SV=1	[more]
A0A1S3C911	4.10e-85	86.27	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1	[more]
A0A6J1BZ60	1.81e-60	71.14	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006565 PE=3 SV=1	[more]
A0A6J1C1A4	1.22e-46	53.37	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]

BLAST of Cp4.1LG13g09460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39518.1	1.0e-20	36.97	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	3.3e-19	36.14	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..137 e-value: 1.3E-21 score: 77.0
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 7..152
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 7..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g09460.1	Cp4.1LG13g09460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding