Cp4.1LG13g09390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATATTAAAGAAAGTCGAAATCTTTACAAATATGTAGAGATTCTAATGGCATGGGAAGCCACCAAAGTTCAATAGCTCAAAACCCGGGTGGACTTGACCATCTTGGTCGTGGGTGGCGTGTCTGCGTGGTTGGTTGAGTCATCGTTTTTGACAACTGGGCTGCGGCAGGCCATCTATATAAACCCACTCCGCAAAATATTCGTTGAAGCTGGACAAAGAGAAACGCAAAGATGGCGATTGGAACTTTGGAGGTGAAATTGGTAAACGCAAAGGGACTTCGAGGCACAGATTTTCTGGGTAATACTCTCTCTTCGTTCCCATATCCTCTGGTGTTCTTCAGATTCTTGATTGATTCCATTTTTTCTGGCTTGTAATGACTAATTTAGAAGAATCGGGGGTTTCTACTTGCCCTTGTTTATTGAATCAAGCTGTTAGATCTGGATGGGTTTGTAATTGGAATGAAGTTAGTTTGTGATTAAGCTAATGATCTTCTTCTCACATAACAGGTGGAATTGACCCTTATGTTCTGATTCAGTATAAGGGCCAAGAGCGCAAGAGCAGTGTTGCCAGAGGTTACTCTTCCTCCTTATTGCTTGCTACCTCATAAATGATGAACTAATATATATATATGGTATCAATTTTTTCATTGAGAATCTGCTTAGGCTGCACCAAAACATCTATTAGTTCATTTTCTCTCTTGATGAGTACTCCTGTTCATATGATCTGTTAAAATGGCATCTGTGTTCTTGGGAATGCAACTGGGCTTTTGTGTGATTAAGCATAGGAAATTAAGAACATTTTTGATCTGGGTTTGGGAAAGTGAGATGTGCTGTTCTTGTTTGTGGAACTTTCATGGTGCAGATGAAGGAGGCAGTCCGGTATGGAACGAGACATTTACATTCCGAGCAGAGTACCCCGGAAGCTGTGATGACTTCAAGCTCGTCCTCAAGATCATGGACCATGACAACTTCTCTGCTGATGATTTCATTGGCCAAACCTCGTAAGACCCTTGATCTTCATCTAGATTATGCCAGATGAAAAGAACATGAGTGTTCTCATGCAGATGTTGTCCTCTTTACACTTTTTCTTTTAGGTTTCCCCTCAAGGTTTAAAACTCGGAGAGGTTTCACACCCTTGTAAAAAATGATTCGTTCTCCTCTCCAACCGATGTGAGATCTCACGATCTACCCTCTTCGGGGCCCAGCATTATCGCTGGAACTCATTCCCCTCCACAATCAATGTGGAAACCTCAATCCACCCACTTCGGGGCCCAGCGTCCTCACTGGCACACTGCCTAATGTCCACCCCCTACAGGGCTCAGCCTCCTCGCCAGCACGTTACCCAGTGTTTGACTCTGATATCATTTATAACAGCCCAAACTCACTATTAGCCGATATTGTCCTCCTTGGATTTTCCGTTCTGAGCTTTCCCTCGAGGTTTTAAAACGCGTTAATTAGGGAGAGGTTTCCACACCCTTATAAGGAATGATTTGTTCCCCTCTCCAACCGACGTGGGATCTCACACTATACCAGTACTCTACCAACACCAACTAGATTGCAACATTACGACAGAAAATAAGAACGATTCATTTGTTTCACACTGTTACAGGATATACGTCGAAGATTTGTTAGCTCTTGGAGCTGAGAACGGCGTGTCGGAGTTACGGGCTCAAAAGTATAGCGTGGTAGGAGCCAATCTGAACTACTCGGGAGAAATTCAAGTGGGAGTGAGCTTCACCCAGAAGGTAATTGAGCTCGTTTACTCATAAAAAAGGGCTAAAATGAGATGAACATTAGTTGATAAAGTTGGTTACATGGTTCACAGGAGACCCAATATGATGGAGAGGAAGTGGGAGGATGGCAGGAGAGTGAATACTAAGGTGGCTTCATCAGCACCACTGTGATACCTGTAGCCTGCAAGGGGGGATTTTTTTTTCTTGGCTTCTGCATCTTCATTATTTCTACTGTAAAATTCCTCATTCAGAACAGAAATTTATAATATTAATCTTAGACCCATTTTATTATTATTATTATTATTATTAATTTGTTTAATATTAGAAGATTAAA ATATATTAAAGAAAGTCGAAATCTTTACAAATATGTAGAGATTCTAATGGCATGGGAAGCCACCAAAGTTCAATAGCTCAAAACCCGGGTGGACTTGACCATCTTGGTCGTGGGTGGCGTGTCTGCGTGGTTGGTTGAGTCATCGTTTTTGACAACTGGGCTGCGGCAGGCCATCTATATAAACCCACTCCGCAAAATATTCGTTGAAGCTGGACAAAGAGAAACGCAAAGATGGCGATTGGAACTTTGGAGGTGAAATTGGTAAACGCAAAGGGACTTCGAGGCACAGATTTTCTGGGTGGAATTGACCCTTATGTTCTGATTCAGTATAAGGGCCAAGAGCGCAAGAGCAGTGTTGCCAGAGATGAAGGAGGCAGTCCGGTATGGAACGAGACATTTACATTCCGAGCAGAGTACCCCGGAAGCTGTGATGACTTCAAGCTCGTCCTCAAGATCATGGACCATGACAACTTCTCTGCTGATGATTTCATTGGCCAAACCTCGATATACGTCGAAGATTTGTTAGCTCTTGGAGCTGAGAACGGCGTGTCGGAGTTACGGGCTCAAAAGTATAGCGTGGTAGGAGCCAATCTGAACTACTCGGGAGAAATTCAAGTGGGAGTGAGCTTCACCCAGAAGGAGACCCAATATGATGGAGAGGAAGTGGGAGGATGGCAGGAGAGTGAATACTAAGGTGGCTTCATCAGCACCACTGTGATACCTGTAGCCTGCAAGGGGGGATTTTTTTTTCTTGGCTTCTGCATCTTCATTATTTCTACTGTAAAATTCCTCATTCAGAACAGAAATTTATAATATTAATCTTAGACCCATTTTATTATTATTATTATTATTATTAATTTGTTTAATATTAGAAGATTAAA ATGGCGATTGGAACTTTGGAGGTGAAATTGGTAAACGCAAAGGGACTTCGAGGCACAGATTTTCTGGGTGGAATTGACCCTTATGTTCTGATTCAGTATAAGGGCCAAGAGCGCAAGAGCAGTGTTGCCAGAGATGAAGGAGGCAGTCCGGTATGGAACGAGACATTTACATTCCGAGCAGAGTACCCCGGAAGCTGTGATGACTTCAAGCTCGTCCTCAAGATCATGGACCATGACAACTTCTCTGCTGATGATTTCATTGGCCAAACCTCGATATACGTCGAAGATTTGTTAGCTCTTGGAGCTGAGAACGGCGTGTCGGAGTTACGGGCTCAAAAGTATAGCGTGGTAGGAGCCAATCTGAACTACTCGGGAGAAATTCAAGTGGGAGTGAGCTTCACCCAGAAGGAGACCCAATATGATGGAGAGGAAGTGGGAGGATGGCAGGAGAGTGAATACTAA MAIGTLEVKLVNAKGLRGTDFLGGIDPYVLIQYKGQERKSSVARDEGGSPVWNETFTFRAEYPGSCDDFKLVLKIMDHDNFSADDFIGQTSIYVEDLLALGAENGVSELRAQKYSVVGANLNYSGEIQVGVSFTQKETQYDGEEVGGWQESEY Homology
BLAST of Cp4.1LG13g09390 vs. ExPASy Swiss-Prot
Match: Q9M2T2 (16 kDa phloem protein 1 OS=Arabidopsis thaliana OX=3702 GN=PP16-1 PE=1 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 7.6e-45 Identity = 82/154 (53.25%), Postives = 122/154 (79.22%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. ExPASy Swiss-Prot
Match: A2WWV5 (Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ERG1 PE=2 SV=2) HSP 1 Score: 155.2 bits (391), Expect = 5.9e-37 Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. ExPASy Swiss-Prot
Match: Q0JHU5 (Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG1 PE=1 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 5.9e-37 Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. ExPASy Swiss-Prot
Match: Q9ZT47 (16 kDa phloem protein 1 OS=Cucurbita maxima OX=3661 GN=PP16-1 PE=1 SV=3) HSP 1 Score: 134.4 bits (337), Expect = 1.1e-30 Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. ExPASy Swiss-Prot
Match: Q9ZT46 (16 kDa phloem protein 2 OS=Cucurbita maxima OX=3661 GN=PP16-2 PE=1 SV=3) HSP 1 Score: 133.3 bits (334), Expect = 2.4e-30 Identity = 65/137 (47.45%), Postives = 87/137 (63.50%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. NCBI nr
Match: XP_023550200.1 (elicitor-responsive protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 308 bits (789), Expect = 1.01e-105 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. NCBI nr
Match: XP_022938500.1 (elicitor-responsive protein 1-like [Cucurbita moschata]) HSP 1 Score: 301 bits (772), Expect = 3.97e-103 Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. NCBI nr
Match: KAG6578692.1 (16 kDa phloem protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 301 bits (772), Expect = 3.97e-103 Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. NCBI nr
Match: XP_022992698.1 (elicitor-responsive protein 1-like [Cucurbita maxima]) HSP 1 Score: 294 bits (753), Expect = 3.14e-100 Identity = 147/153 (96.08%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. NCBI nr
Match: XP_038890560.1 (16 kDa phloem protein 1 [Benincasa hispida]) HSP 1 Score: 283 bits (725), Expect = 5.84e-96 Identity = 139/153 (90.85%), Postives = 146/153 (95.42%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. ExPASy TrEMBL
Match: A0A6J1FJZ3 (elicitor-responsive protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444720 PE=4 SV=1) HSP 1 Score: 301 bits (772), Expect = 1.92e-103 Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. ExPASy TrEMBL
Match: A0A6J1K000 (elicitor-responsive protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488961 PE=4 SV=1) HSP 1 Score: 294 bits (753), Expect = 1.52e-100 Identity = 147/153 (96.08%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. ExPASy TrEMBL
Match: A0A5A7T4B4 (Elicitor-responsive protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00220 PE=4 SV=1) HSP 1 Score: 271 bits (694), Expect = 1.51e-91 Identity = 132/153 (86.27%), Postives = 144/153 (94.12%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. ExPASy TrEMBL
Match: A0A1S3CA43 (elicitor-responsive protein 1-like OS=Cucumis melo OX=3656 GN=LOC103498144 PE=4 SV=1) HSP 1 Score: 271 bits (694), Expect = 1.51e-91 Identity = 132/153 (86.27%), Postives = 144/153 (94.12%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. ExPASy TrEMBL
Match: A0A0A0KNV3 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517180 PE=4 SV=1) HSP 1 Score: 267 bits (682), Expect = 1.02e-89 Identity = 130/153 (84.97%), Postives = 143/153 (93.46%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. TAIR 10
Match: AT3G55470.2 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 183.0 bits (463), Expect = 1.9e-46 Identity = 82/153 (53.59%), Postives = 120/153 (78.43%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. TAIR 10
Match: AT3G55470.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 181.4 bits (459), Expect = 5.4e-46 Identity = 82/154 (53.25%), Postives = 122/154 (79.22%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. TAIR 10
Match: AT1G63220.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 95.5 bits (236), Expect = 3.9e-20 Identity = 62/155 (40.00%), Postives = 84/155 (54.19%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. TAIR 10
Match: AT4G00467.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 77.0 bits (188), Expect = 1.4e-14 Identity = 43/137 (31.39%), Postives = 81/137 (59.12%), Query Frame = 0
BLAST of Cp4.1LG13g09390 vs. TAIR 10
Match: AT1G20080.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 55.8 bits (133), Expect = 3.4e-08 Identity = 33/97 (34.02%), Postives = 48/97 (49.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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