Cp4.1LG13g08980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG13g08980
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionProteasome assembly chaperone 3
LocationCp4.1LG13: 7686287 .. 7689231 (+)
RNA-Seq ExpressionCp4.1LG13g08980
SyntenyCp4.1LG13g08980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTAAGGGCACTGTTTAAAGAACTAGAAGAACAGAGAAAAACAAATGGTGGGTGGATTGACTTCGAAGTTCAAGAGTTGGTGAGCAAAGAAACTTGATTGAATTGACCCTAGTCACAACACTTTCACTCTTCCTTCCCGCATGGAAAGCTCGGGTGGTACTCGCTTTCCGGTTTCCCACAAGCAGGCCTCATTGGAAATCAAGGTATGGATTACTTGCTCTGGATTAAATTAATCCATCCTACACAGTCCTTGAACGAATTCGGGATTAGGGTGTTGTGATTTTCCCTGTAGCAGCGTTGTTTTCAAGGGTTGATTTTAATTTAAAGGATTCGCGTTTGCACATAACCTGTTTGCTTAAATGCCGCAGCTAGTTTTATTAGCTTTAATAGACTGGTGATTCTTCTGCGAGTTGCTGATGGGGAAGCTTGAATTTGGATGATACGGAAACAAATTTAAAGTGGGGTTAAGTGATTTGAGGTTTTAAATGGTGAATTTGTTCTTATTTTTTGGTGAATTCGAGTTAGGGATATGCAGGATGTTTACCGAAATTAAATTGCTTCTTCCTGCTTGTATTAATCATTTGAATATAATGCTTGCTTCAAATCCTCCTTGCGGCTTATTGTTTTTCATCGATAGTTACTTGATTTTGATGAACCAATACATTTCTTGCAAGATTCTACGCCTGTCATTGTATATTTTTTGAACATCTGTGGATTTCATTGCCTATGTTCTAGTTCAAATTCAGGGCACTTTACTATTCATCATTGGTTAGCTGAGGGAGTTAGTAATCTCATTCATATGTCTTCTGCTTTCAGGGAATCAAAACGGATATAGTCGTCTGTCGCCACGACGATCATTTTCTTGTCAGTAGGAGTTCGGTTTTATATTATTACAAGTGCATATGTTTTTGTTGGAGGAGGATGGGGAAATGGGGATTTTGGTATCTATTAGTGTGTGTTATTTACATCTCTGATGTTTGAAACTGATTTGAAGGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGCTGCAAGCGAGGTGAGCAATTACTGGTCATTTCTGCAAAATTTAGCGATTCTATACCCTCAAATACACATATTTGTAATCAAACTTCCATCAATTAAGATCACAACCATTACACTTCGCAGACTTTCTTTTGGAGGAGTAACGCTTCATAGCTTTCAGCTTAAATATTGCTGAAAAAAATTTAACTTCCCAAGTTATTGGAACTAATGATTTATGCTTATTATGTTATGCTATATTAGAAGCTTCTTCTACATCTATATGTTACAATCCGCAGGAAGGAGGAGGGGATGGCAATTCATTCAACCTTCTCAGTGTCTACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTACGTTACAGTAGTTTGTTAGTGAATAATGCTGCGATTGATACATGGAATTTTCAGCCGATGCTGGTTGCATGTGCACGTCAGTTGATCGAACAAATCAGGTAAACCTTCCAATTCAACATCATCGAACTTTACGGTTTGAACACTTCTACTCCTTTTGAAGATCTGACTTCTGGGCATGTGTGTATGTGCTCTTTGGAAATCTGCGGATAATGTATACAATAACCGAAACGTGCTATATTTCTATTAAGTAGATAATCTGTCTTAATGTTTGGGATCTTGACTTGTCAGACTCTGATTTATGGAAATGCTACATTCCTTATTTGGTGTCTTTTAGCTTTGCTGGGTGTTCTACTAGAGACGCTTCTTAAAGCTTCTTTAACATGGCTTAAGGCTTAATGAGAGATCCAACTATAGAGCTTAAAACTTGTCATATTATAAGGAATGCTTTCTTTGTTCGCTTCTCCAACTGATGTGAGATCTCACAATAGCCGAAAGAAGACAACATCTGCTAGCGGTAGGCTTGGACTATTACAAATGGTATCGGAGCTAGACACCAAGCGGAGTGCCAGCGAGGACGCTAGGACCCTAAGGGGGGTAGATTGTGAGATCCTACATTGGTTGGAGAGAGGAACGAAACATTCCTTATACAGTCCAAAGTTAAGGTCCTTAACTTTTTGGAGTGGGATCTCTGACTAACTAGATGGGTAGACTTTGTGGTGATGCTTGGCAATTCCACTTTCTCTGGGAGGGAGAACTTTATGGCAATGCAAGGGCTTTTCACTACTACTTTAGACATTTACTTGAAGTAGACCCACTTGTAGAATTCTTAGAATACATTTATTGATGTGCATATTGAAGCATAGAACTTTTTACGCCCCATCAAGATAGCCACATTCAAATAACATGCTGAAATTATTCTTTTGTTTATGCAGTTTATCAGGTTCATACAAGCCATTATTAATCTCTCTTGGCCTAAAAGACCATTCTGTGGTAATTACTCAAATATGTTATTTTTTCCAGACTTAGTAAATTGAATAAGTTTAATTGGATTCTTCCTGTTTTGCAGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAAACTTTGGTAATATTTGACTTTTGCTGCTTAAACCCTCGTTTTGTTCACATTCAGTAAGATACATATTTATATTCCTACTTCTGTGACCTTTTTTGGTGGGGTTTTGACGATTTATTGGCAAATGATCTCTTGTCTGATCAATAAGATAGTAGACGAGAATGAGATTTCAAAAGTAGATTGTGTGATTAGCTCTATTGTTTTTAGTTAACGATGTATCAGTGAAGATTCAAACATCTAACTTTAAGAATAGATGTAATATCTTATCCTGTTTGTTGGAGAATGAAACGTGGTTCCAGGCATTCAAACATCTATTCTTGACGATGTATCAGTGAAGATTCAAATATCTAACTTTAAGAATAGATGTAATATCTTATCCTGTTTGTTGGAGAATGAAACGTGGTTCACGGCGGAGGTTCTAAAGCCACCCATTAGTGACTCAGTGGCTTGCTTTCATAT

mRNA sequence

TGTAAGGGCACTGTTTAAAGAACTAGAAGAACAGAGAAAAACAAATGGTGGGTGGATTGACTTCGAAGTTCAAGAGTTGGTGAGCAAAGAAACTTGATTGAATTGACCCTAGTCACAACACTTTCACTCTTCCTTCCCGCATGGAAAGCTCGGGTGGTACTCGCTTTCCGGTTTCCCACAAGCAGGCCTCATTGGAAATCAAGGGAATCAAAACGGATATAGTCGTCTGTCGCCACGACGATCATTTTCTTGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGCTGCAAGCGAGGAAGGAGGAGGGGATGGCAATTCATTCAACCTTCTCAGTGTCTACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTACGTTACAGTAGTTTGTTAGTGAATAATGCTGCGATTGATACATGGAATTTTCAGCCGATGCTGGTTGCATGTGCACGTCAGTTGATCGAACAAATCAGTTTATCAGGTTCATACAAGCCATTATTAATCTCTCTTGGCCTAAAAGACCATTCTGTGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAAACTTTGGTAATATTTGACTTTTGCTGCTTAAACCCTCGTTTTGTTCACATTCAGTAAGATACATATTTATATTCCTACTTCTGTGACCTTTTTTGGTGGGGTTTTGACGATTTATTGGCAAATGATCTCTTGTCTGATCAATAAGATAGTAGACGAGAATGAGATTTCAAAAGTAGATTGTGTGATTAGCTCTATTGTTTTTAGTTAACGATGTATCAGTGAAGATTCAAACATCTAACTTTAAGAATAGATGTAATATCTTATCCTGTTTGTTGGAGAATGAAACGTGGTTCCAGGCATTCAAACATCTATTCTTGACGATGTATCAGTGAAGATTCAAATATCTAACTTTAAGAATAGATGTAATATCTTATCCTGTTTGTTGGAGAATGAAACGTGGTTCACGGCGGAGGTTCTAAAGCCACCCATTAGTGACTCAGTGGCTTGCTTTCATAT

Coding sequence (CDS)

ATGGAAAGCTCGGGTGGTACTCGCTTTCCGGTTTCCCACAAGCAGGCCTCATTGGAAATCAAGGGAATCAAAACGGATATAGTCGTCTGTCGCCACGACGATCATTTTCTTGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGCTGCAAGCGAGGAAGGAGGAGGGGATGGCAATTCATTCAACCTTCTCAGTGTCTACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTACGTTACAGTAGTTTGTTAGTGAATAATGCTGCGATTGATACATGGAATTTTCAGCCGATGCTGGTTGCATGTGCACGTCAGTTGATCGAACAAATCAGTTTATCAGGTTCATACAAGCCATTATTAATCTCTCTTGGCCTAAAAGACCATTCTGTGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAAACTTTGGTAA

Protein sequence

MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Homology
[Close]
BLAST of Cp4.1LG13g08980 vs. ExPASy Swiss-Prot
Match: Q55G88 (Proteasome assembly chaperone 3 OS=Dictyostelium discoideum OX=44689 GN=psmG3 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.1e-07
Identity = 36/139 (25.90%), Postives = 62/139 (44.60%), Query Frame = 0 

Query: 10  PVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI-HSTFSVST 69
           PV  K  S +I  + TDI +    D   +  +Q     T ++A K +G+ +   ++ + T
Sbjct: 30  PVKSKVLSKKINNVDTDIAISSFADAIFITISQNQKFNTWIRASKSDGILLDEPSYQIDT 89

Query: 70  VFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLLISLGLKD 129
           + G   +V                      +    ARQLIE I    S K L++S+ + D
Sbjct: 90  LLGNNQDV----------------------LFSIYARQLIENIG-ETSNKSLMLSISITD 145

Query: 130 HSVETMRGIVTAVSENKLW 148
            S +T + I++ + ENK+W
Sbjct: 150 KSKDTFKQILSTIFENKVW 145

[Close]
BLAST of Cp4.1LG13g08980 vs. ExPASy Swiss-Prot
Match: Q2NKS3 (Proteasome assembly chaperone 3 OS=Bos taurus OX=9913 GN=PSMG3 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 9.7e-05
Identity = 30/137 (21.90%), Postives = 60/137 (43.80%), Query Frame = 0 

Query: 11  VSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAIHSTFSVSTVF 70
           ++ KQ +  + G+ T +V      H LV+ TQ+G MGT++              SV++  
Sbjct: 7   LTSKQKTAVVCGVPTQVVCTAFSSHILVVVTQLGKMGTLVSLEPS---------SVTSDV 66

Query: 71  GKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLLISLGLKDHS 130
           GK             V    +     +P++   A+ L+  +S     + +L++L  KD S
Sbjct: 67  GKP------------VLTTKVLLGKDEPLVHVFAKNLVAFVSQEAGNRAVLLALATKDKS 122

Query: 131 VETMRGIVTAVSENKLW 148
           +E ++ +   +   ++W
Sbjct: 127 MEAVKALQEVIQACQVW 122

[Close]
BLAST of Cp4.1LG13g08980 vs. NCBI nr
Match: KAG7016194.1 (hypothetical protein SDJN02_21299 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 281 bits (719), Expect = 3.63e-95
Identity = 145/152 (95.39%), Postives = 146/152 (96.05%), Query Frame = 0 

Query: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLV-----IATQIGAMGTMLQARKE 60
           MESSGGTRFPVSHKQAS EIKGIKTDIVVCRHDDHFLV     IATQIGAMGTMLQARKE
Sbjct: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE 60

Query: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSG 120
           EGMAIHSTFSVSTVFGKRDEVSQLRYSSLL+NNAAIDTWNFQPMLVACARQLIEQISLSG
Sbjct: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG 120

Query: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 147
           SYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Sbjct: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 152

[Close]
BLAST of Cp4.1LG13g08980 vs. NCBI nr
Match: XP_022993682.1 (uncharacterized protein LOC111489603 isoform X1 [Cucurbita maxima] >XP_023551096.1 uncharacterized protein LOC111809020 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235 bits (599), Expect = 2.91e-77
Identity = 125/147 (85.03%), Postives = 125/147 (85.03%), Query Frame = 0 

Query: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60
           MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI
Sbjct: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60

Query: 61  HSTFSVSTVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPL 120
           HSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSGSYKPL
Sbjct: 61  HSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSGSYKPL 120

Query: 121 LISLGLKDHSVETMRGIVTAVSENKLW 147
           LISLGLKDHSVETMRGIVTAVSENKLW
Sbjct: 121 LISLGLKDHSVETMRGIVTAVSENKLW 125

[Close]
BLAST of Cp4.1LG13g08980 vs. NCBI nr
Match: XP_022939014.1 (uncharacterized protein LOC111445047 isoform X1 [Cucurbita moschata] >KAG6578653.1 Proteasome assembly chaperone 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233 bits (593), Expect = 2.39e-76
Identity = 124/147 (84.35%), Postives = 124/147 (84.35%), Query Frame = 0 

Query: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60
           MESSGGTRFPVSHKQAS EIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI
Sbjct: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60

Query: 61  HSTFSVSTVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPL 120
           HSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSGSYKPL
Sbjct: 61  HSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSGSYKPL 120

Query: 121 LISLGLKDHSVETMRGIVTAVSENKLW 147
           LISLGLKDHSVETMRGIVTAVSENKLW
Sbjct: 121 LISLGLKDHSVETMRGIVTAVSENKLW 125

[Close]
BLAST of Cp4.1LG13g08980 vs. NCBI nr
Match: XP_022993683.1 (uncharacterized protein LOC111489603 isoform X2 [Cucurbita maxima] >XP_022993684.1 uncharacterized protein LOC111489603 isoform X3 [Cucurbita maxima] >XP_023551097.1 uncharacterized protein LOC111809020 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023551098.1 uncharacterized protein LOC111809020 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231 bits (588), Expect = 1.34e-75
Identity = 124/146 (84.93%), Postives = 124/146 (84.93%), Query Frame = 0 

Query: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60
           MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI
Sbjct: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60

Query: 61  HSTFSVSTVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPL 120
           HSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSGSYKPL
Sbjct: 61  HSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSGSYKPL 120

Query: 121 LISLGLKDHSVETMRGIVTAVSENKL 146
           LISLGLKDHSVETMRGIVTAVSENKL
Sbjct: 121 LISLGLKDHSVETMRGIVTAVSENKL 124

[Close]
BLAST of Cp4.1LG13g08980 vs. NCBI nr
Match: XP_022939015.1 (uncharacterized protein LOC111445047 isoform X2 [Cucurbita moschata] >XP_022939016.1 uncharacterized protein LOC111445047 isoform X3 [Cucurbita moschata])

HSP 1 Score: 228 bits (582), Expect = 1.10e-74
Identity = 123/146 (84.25%), Postives = 123/146 (84.25%), Query Frame = 0 

Query: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60
           MESSGGTRFPVSHKQAS EIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI
Sbjct: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60

Query: 61  HSTFSVSTVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPL 120
           HSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSGSYKPL
Sbjct: 61  HSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSGSYKPL 120

Query: 121 LISLGLKDHSVETMRGIVTAVSENKL 146
           LISLGLKDHSVETMRGIVTAVSENKL
Sbjct: 121 LISLGLKDHSVETMRGIVTAVSENKL 124

[Close]
BLAST of Cp4.1LG13g08980 vs. ExPASy TrEMBL
Match: A0A6J1JTJ3 (uncharacterized protein LOC111489603 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489603 PE=4 SV=1)

HSP 1 Score: 235 bits (599), Expect = 1.41e-77
Identity = 125/147 (85.03%), Postives = 125/147 (85.03%), Query Frame = 0 

Query: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60
           MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI
Sbjct: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60

Query: 61  HSTFSVSTVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPL 120
           HSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSGSYKPL
Sbjct: 61  HSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSGSYKPL 120

Query: 121 LISLGLKDHSVETMRGIVTAVSENKLW 147
           LISLGLKDHSVETMRGIVTAVSENKLW
Sbjct: 121 LISLGLKDHSVETMRGIVTAVSENKLW 125

[Close]
BLAST of Cp4.1LG13g08980 vs. ExPASy TrEMBL
Match: A0A6J1FFU1 (uncharacterized protein LOC111445047 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445047 PE=4 SV=1)

HSP 1 Score: 233 bits (593), Expect = 1.16e-76
Identity = 124/147 (84.35%), Postives = 124/147 (84.35%), Query Frame = 0 

Query: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60
           MESSGGTRFPVSHKQAS EIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI
Sbjct: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60

Query: 61  HSTFSVSTVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPL 120
           HSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSGSYKPL
Sbjct: 61  HSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSGSYKPL 120

Query: 121 LISLGLKDHSVETMRGIVTAVSENKLW 147
           LISLGLKDHSVETMRGIVTAVSENKLW
Sbjct: 121 LISLGLKDHSVETMRGIVTAVSENKLW 125

[Close]
BLAST of Cp4.1LG13g08980 vs. ExPASy TrEMBL
Match: A0A6J1K306 (uncharacterized protein LOC111489603 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489603 PE=4 SV=1)

HSP 1 Score: 231 bits (588), Expect = 6.47e-76
Identity = 124/146 (84.93%), Postives = 124/146 (84.93%), Query Frame = 0 

Query: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60
           MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI
Sbjct: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60

Query: 61  HSTFSVSTVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPL 120
           HSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSGSYKPL
Sbjct: 61  HSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSGSYKPL 120

Query: 121 LISLGLKDHSVETMRGIVTAVSENKL 146
           LISLGLKDHSVETMRGIVTAVSENKL
Sbjct: 121 LISLGLKDHSVETMRGIVTAVSENKL 124

[Close]
BLAST of Cp4.1LG13g08980 vs. ExPASy TrEMBL
Match: A0A6J1FLG3 (uncharacterized protein LOC111445047 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445047 PE=4 SV=1)

HSP 1 Score: 228 bits (582), Expect = 5.32e-75
Identity = 123/146 (84.25%), Postives = 123/146 (84.25%), Query Frame = 0 

Query: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60
           MESSGGTRFPVSHKQAS EIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI
Sbjct: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60

Query: 61  HSTFSVSTVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPL 120
           HSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSGSYKPL
Sbjct: 61  HSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSGSYKPL 120

Query: 121 LISLGLKDHSVETMRGIVTAVSENKL 146
           LISLGLKDHSVETMRGIVTAVSENKL
Sbjct: 121 LISLGLKDHSVETMRGIVTAVSENKL 124

[Close]
BLAST of Cp4.1LG13g08980 vs. ExPASy TrEMBL
Match: A0A6J1JPF5 (uncharacterized protein LOC111487705 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487705 PE=4 SV=1)

HSP 1 Score: 213 bits (541), Expect = 9.44e-69
Identity = 112/147 (76.19%), Postives = 121/147 (82.31%), Query Frame = 0 

Query: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60
           ME SG +RFP SHKQAS+EIKGIKTD+V+CRHDDHFLVIATQIGAMGTMLQARKEEGMAI
Sbjct: 1   MEISG-SRFPFSHKQASMEIKGIKTDVVICRHDDHFLVIATQIGAMGTMLQARKEEGMAI 60

Query: 61  HSTFSVSTVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPL 120
           H TFSVSTVFGKR+E                      PML+ACARQLIEQISLSGSYKPL
Sbjct: 61  HPTFSVSTVFGKRNE----------------------PMLIACARQLIEQISLSGSYKPL 120

Query: 121 LISLGLKDHSVETMRGIVTAVSENKLW 147
           LISLGLKDHSVETMRGI++AVSEN+LW
Sbjct: 121 LISLGLKDHSVETMRGILSAVSENRLW 124

[Close]
BLAST of Cp4.1LG13g08980 vs. TAIR 10
Match: AT5G14710.1 (CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 148.7 bits (374), Expect = 3.7e-36
Identity = 77/141 (54.61%), Postives = 94/141 (66.67%), Query Frame = 0 

Query: 7   TRFPVSHKQASLEIKGIKTDIVVCRHDDHFLVIATQIGAMGTMLQARKEEGMAIHSTFSV 66
           T FPV H++ S E KG KT+IV+C ++DH L+IATQIGAMGT+L ARKEEGM++  TFSV
Sbjct: 6   TNFPVRHRKVSFESKGNKTEIVICSYEDHILIIATQIGAMGTILHARKEEGMSVEPTFSV 65

Query: 67  STVFGKRDEVSQLRYSSLLVNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLLISLGL 126
           S +FGKRDE                      PML A AR+LIE IS     KPL++SLGL
Sbjct: 66  SVIFGKRDE----------------------PMLTATARRLIEHISSIVPSKPLVLSLGL 124

Query: 127 KDHSVETMRGIVTAVSENKLW 148
           KDHS ET++ IV  V EN+LW
Sbjct: 126 KDHSSETLKEIVATVIENRLW 124

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g08980 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q55G886.1e-0725.90Proteasome assembly chaperone 3 OS=Dictyostelium discoideum OX=44689 GN=psmG3 PE... [more]
Q2NKS39.7e-0521.90Proteasome assembly chaperone 3 OS=Bos taurus OX=9913 GN=PSMG3 PE=2 SV=1[more]
BLAST of Cp4.1LG13g08980 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7016194.13.63e-9595.39hypothetical protein SDJN02_21299 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022993682.12.91e-7785.03uncharacterized protein LOC111489603 isoform X1 [Cucurbita maxima] >XP_023551096... [more]
XP_022939014.12.39e-7684.35uncharacterized protein LOC111445047 isoform X1 [Cucurbita moschata] >KAG6578653... [more]
XP_022993683.11.34e-7584.93uncharacterized protein LOC111489603 isoform X2 [Cucurbita maxima] >XP_022993684... [more]
XP_022939015.11.10e-7484.25uncharacterized protein LOC111445047 isoform X2 [Cucurbita moschata] >XP_0229390... [more]
BLAST of Cp4.1LG13g08980 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JTJ31.41e-7785.03uncharacterized protein LOC111489603 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FFU11.16e-7684.35uncharacterized protein LOC111445047 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1K3066.47e-7684.93uncharacterized protein LOC111489603 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FLG35.32e-7584.25uncharacterized protein LOC111445047 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JPF59.44e-6976.19uncharacterized protein LOC111487705 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Cp4.1LG13g08980 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G14710.13.7e-3654.61CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788)... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018788Proteasome assembly chaperone 3PFAMPF10178PAC3coord: 38..88
e-value: 4.4E-8
score: 33.2
coord: 97..144
e-value: 1.9E-12
score: 47.2
IPR018788Proteasome assembly chaperone 3PANTHERPTHR31051PROTEASOME ASSEMBLY CHAPERONE 3coord: 5..147
NoneNo IPR availableGENE3D3.30.230.90coord: 7..147
e-value: 6.4E-26
score: 92.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g08980.1Cp4.1LG13g08980.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043248 proteasome assembly
cellular_component GO:0000502 proteasome complex