Cp4.1LG13g08500 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g08500
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ribonuclease 1-like
Location	Cp4.1LG13: 7986033 .. 7987100 (+)
RNA-Seq Expression	Cp4.1LG13g08500
Synteny	Cp4.1LG13g08500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATTCTCTTTCTCATCTTCCAGCTTCTTGGTAGAACCGTAACATGTCAAGACGACATTGCATCATATAACTCTTCACAGGTAATTATTGAGTATTGAAACTAAATTGTTTATACTTTCCATTCAGAGTTGATGAAATTGACATCCCCTTTTGTTTACCTATCCAGCCGGTCTCAGAAGGCAGTGGAAACTCTGACTTCTTTTACCTTGTTCAACAGGTAATCAAATTTTGTTTGTTCCCATTTGGTAATCTCACGATCTCTCTTCTAATTTCTGGCTATTTGATGGTAAGCATCAGTGGCAGATTTCTCTATGCAATTTGAAGCCTTGTCAAAAGCCAGCAACACCCACTTTCAGCATTTATGGCTTCTGGCCTGCTTGTTCTTCTGGGATGCCCAATTGCAAAACTAGAACCACTTTTGACCCTTCAAAGGTACTTTTCTGTAGAGATATAGAGAGGGTTTGATGATTCATATGGATTATATGATGTATTGTTTTGTAAATGGGTTTTTACAGATGTCGGATCTGAAAAATGAGTTAGATAAAGAATGGCCATCTCTTGAGGAGGAGGAGAATGAGAAGATATGGAAGAAAGAATGGGAAAGGCATGGAATTTGTTCTGAACCATTGCTCACTCAGCATGCTTTCTTTGAAACTGCACTCAAGCTTAAGCAAACTTATGATCTCTTCAATATCCTAGCAAACAGAGGTGTGTGTTTCCAAACAAAAAAAGTAATGATACTAACTTGGAGAAGGCAATGCTGATGAATGGTTGTTTGTGATGCAGCGATATTTCCATTTGGAGAGGTGTATGGGTTAGAGAACATAAGTGATGCCATTAAAGCTGCGACGGGGCACACTCCACAAGTGGAATGCAAGTCATATAAACGCATCCCTCTGCTCTCCAACATCTTCCTTTGCTTCCAATACACTGCAACATCTTCCATTCATATTGTGGACTGCCCCCTCGTAACAAGATGCAAATTCCAAGCCGTCCTTTTCCCTTATGATATTTTTGGTCCATCTTACAACTTCAAATCTACTACTTTAAGCAATCCCCACTAG

mRNA sequence

ATGTTGATTCTCTTTCTCATCTTCCAGCTTCTTGGTAGAACCGTAACATGTCAAGACGACATTGCATCATATAACTCTTCACAGCCGGTCTCAGAAGGCAGTGGAAACTCTGACTTCTTTTACCTTGTTCAACAGTGGCAGATTTCTCTATGCAATTTGAAGCCTTGTCAAAAGCCAGCAACACCCACTTTCAGCATTTATGGCTTCTGGCCTGCTTGTTCTTCTGGGATGCCCAATTGCAAAACTAGAACCACTTTTGACCCTTCAAAGATGTCGGATCTGAAAAATGAGTTAGATAAAGAATGGCCATCTCTTGAGGAGGAGGAGAATGAGAAGATATGGAAGAAAGAATGGGAAAGGCATGGAATTTGTTCTGAACCATTGCTCACTCAGCATGCTTTCTTTGAAACTGCACTCAAGCTTAAGCAAACTTATGATCTCTTCAATATCCTAGCAAACAGAGCGATATTTCCATTTGGAGAGGTGTATGGGTTAGAGAACATAAGTGATGCCATTAAAGCTGCGACGGGGCACACTCCACAAGTGGAATGCAAGTCATATAAACGCATCCCTCTGCTCTCCAACATCTTCCTTTGCTTCCAATACACTGCAACATCTTCCATTCATATTGTGGACTGCCCCCTCGTAACAAGATGCAAATTCCAAGCCGTCCTTTTCCCTTATGATATTTTTGGTCCATCTTACAACTTCAAATCTACTACTTTAAGCAATCCCCACTAG

Coding sequence (CDS)

ATGTTGATTCTCTTTCTCATCTTCCAGCTTCTTGGTAGAACCGTAACATGTCAAGACGACATTGCATCATATAACTCTTCACAGCCGGTCTCAGAAGGCAGTGGAAACTCTGACTTCTTTTACCTTGTTCAACAGTGGCAGATTTCTCTATGCAATTTGAAGCCTTGTCAAAAGCCAGCAACACCCACTTTCAGCATTTATGGCTTCTGGCCTGCTTGTTCTTCTGGGATGCCCAATTGCAAAACTAGAACCACTTTTGACCCTTCAAAGATGTCGGATCTGAAAAATGAGTTAGATAAAGAATGGCCATCTCTTGAGGAGGAGGAGAATGAGAAGATATGGAAGAAAGAATGGGAAAGGCATGGAATTTGTTCTGAACCATTGCTCACTCAGCATGCTTTCTTTGAAACTGCACTCAAGCTTAAGCAAACTTATGATCTCTTCAATATCCTAGCAAACAGAGCGATATTTCCATTTGGAGAGGTGTATGGGTTAGAGAACATAAGTGATGCCATTAAAGCTGCGACGGGGCACACTCCACAAGTGGAATGCAAGTCATATAAACGCATCCCTCTGCTCTCCAACATCTTCCTTTGCTTCCAATACACTGCAACATCTTCCATTCATATTGTGGACTGCCCCCTCGTAACAAGATGCAAATTCCAAGCCGTCCTTTTCCCTTATGATATTTTTGGTCCATCTTACAACTTCAAATCTACTACTTTAAGCAATCCCCACTAG

Protein sequence

MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPATPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWERHGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTPQVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPSYNFKSTTLSNPH

Homology

[Close]

BLAST of Cp4.1LG13g08500 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-30
Identity = 81/209 (38.76%), Postives = 108/209 (51.67%), Query Frame = 0


Query: 31  SEGSGNSDFFYLVQQWQISLCNL-KPC-----QKPATPTFSIYGFWPACSSGM--PNCKT 90
           S  S + DFFY VQQW  S C+  K C      KPA   F I+G WP    G    NC  
Sbjct: 24  SSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAA-DFGIHGLWPNYKDGTYPSNCDA 83

Query: 91  RTTFDPSKMSDLKNELDKEWPSL--EEEENEKIWKKEWERHGICSEPLLTQHAFFETALK 150
              FD S +SDL   + K WP+L       E  W+ EWE+HG CSE ++ QH +F+TAL 
Sbjct: 84  SKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALN 143

Query: 151 LKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTPQVEC-KSYKRIPLLSNIFLC 210
           LKQ  +L   L    I P G+ Y LE+I D+IK + G TP VEC +       L  ++LC
Sbjct: 144 LKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLC 203

Query: 211 FQYTATSSIHIVDCPLVTRCKFQA-VLFP 228
              + +    +++CP+    K  A + FP
Sbjct: 204 VDRSGSG---LIECPVFPHGKCGAEIEFP 228

[Close]

BLAST of Cp4.1LG13g08500 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 5.5e-29
Identity = 73/189 (38.62%), Postives = 104/189 (55.03%), Query Frame = 0


Query: 38  DFFYLVQQWQISLCNLK-PCQKPAT----PTFSIYGFWPACSSGM--PNCKTRTTFDPSK 97
           DFFY VQQW  S C+ K  C  P T      F I+G WP  + G    NC   + +D S+
Sbjct: 30  DFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIHGLWPNNNDGTYPSNCDPNSPYDQSQ 89

Query: 98  MSDLKNELDKEWPSL--EEEENEKIWKKEWERHGICSEPLLT-QHAFFETALKLKQTYDL 157
           +SDL + + + WP+L          W  EWE+HG C+E +LT QHA+F+ AL LK   DL
Sbjct: 90  ISDLISSMQQNWPTLACPSGSGSTFWSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDL 149

Query: 158 FNILANRAIFPFGEVYGLENISDAIKAATGHTPQVECK-SYKRIPLLSNIFLCFQYTATS 216
            +IL    I P GE Y L NI +AIK+A G+TP ++C         L  +++C   + +S
Sbjct: 150 LSILQGADIHPDGESYDLVNIRNAIKSAIGYTPWIQCNVDQSGNSQLYQVYICVDGSGSS 209

[Close]

BLAST of Cp4.1LG13g08500 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.7e-28
Identity = 76/202 (37.62%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 38  DFFYLVQQWQISLCNLK-PCQKPAT----PTFSIYGFWPACSSG--MPNCKTRTTFDPSK 97
           DFFY V QW  + C+ +  C  P T      F I+G WP   +G    NC   + FD  +
Sbjct: 23  DFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPNYKTGGWPQNCNPDSRFDDLR 82

Query: 98  MSDLKNELDKEWPSLEEEENE--KIWKKEWERHGICSEPLLTQHAFFETALKLKQTYDLF 157
           +SDL ++L +EWP+L    N+  K W  EWE+HG C+E  L QH +FE  LKLKQ  +L 
Sbjct: 83  VSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKANLL 142

Query: 158 NILANRAIFPFGEVYGLENISDAIKAATGHTPQVEC-KSYKRIPLLSNIFLCFQYTATSS 217
           + L N  I P  + Y +++I + IK   G  P +EC K       L  I+LC     TS+
Sbjct: 143 HALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYLCVD---TSA 202

Query: 218 IHIVDCPLVT--RCKFQAVLFP 228
              ++CP++   RC    V FP
Sbjct: 203 SKFINCPVMPHGRCD-SRVQFP 220

[Close]

BLAST of Cp4.1LG13g08500 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-27
Identity = 75/193 (38.86%), Postives = 102/193 (52.85%), Query Frame = 0


Query: 34  SGNSDFFYLVQQWQISLCNL-KPCQKPAT----PTFSIYGFWPACSSGM--PNCKTRTTF 93
           S + DFFY VQQW  S C+  + C  P T      FSI+G WP    G    NC   ++ 
Sbjct: 25  SQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYKDGKWPQNCDRESSL 84

Query: 94  DPSKMSDLKNELDKEWPSL--EEEENEKIWKKEWERHGICSEPLLTQHAFFETALKLKQT 153
           D S+ SDL + ++K WPSL     +  K W  EW +HG CS   L QHA+F+TAL  K  
Sbjct: 85  DESEFSDLISTMEKNWPSLACPSSDGLKFWSHEWLKHGTCS--ALNQHAYFQTALDFKTK 144

Query: 154 YDLFNILANRAIFP-FGEVYGLENISDAIKAATGHTPQVECK-SYKRIPLLSNIFLCFQY 213
            +L   L N  I P  G+ YG+E+I  AI+   GHTP +EC    +    L  ++LC   
Sbjct: 145 SNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPFIECNVDSQGNHQLYQVYLCVDS 204

Query: 214 TATSSIHIVDCPL 216
           +A+     +DCP+
Sbjct: 205 SASK---FIDCPI 212

[Close]

BLAST of Cp4.1LG13g08500 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22
Identity = 56/182 (30.77%), Postives = 93/182 (51.10%), Query Frame = 0


Query: 38  DFFYLVQQWQISLCNLK---PCQKPATPTFSIYGFWPACS-SGMPNCKTRTTFDPSKMSD 97
           D F+ VQQW  ++C+ +    C      TF+I+G WP  S + + NC   + FD +K+S 
Sbjct: 2   DSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFDITKISH 61

Query: 98  LKNELDKEWPSLEEEENEKIWKKEWERHGICSEPLLTQHAFFETALKLKQTYDLFNILAN 157
           L+++L+  WP++    N++ W  EW +HG CSE    Q A+F+ A+ ++  YD+   L  
Sbjct: 62  LQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRP 121

Query: 158 RAIFPFGEVYGLENISDAIKAATGHTPQVECKS--YKRIPLLSNIFLCFQYTATSSIHIV 214
            A  P G     + I   +KA  G  P + C++    ++  L  +  CF   A     ++
Sbjct: 122 HAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACF---AQDGSTLI 180

[Close]

BLAST of Cp4.1LG13g08500 vs. NCBI nr
Match: XP_023550124.1 (ribonuclease 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 512 bits (1319), Expect = 1.89e-183
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPA 60
           MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPA
Sbjct: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPA 60

Query: 61  TPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120
           TPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER
Sbjct: 61  TPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120

Query: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180
           HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP
Sbjct: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180

Query: 181 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPSYNFKST 240
           QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPSYNFKST
Sbjct: 181 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPSYNFKST 240

Query: 241 TLSNPH 246
           TLSNPH
Sbjct: 241 TLSNPH 246

[Close]

BLAST of Cp4.1LG13g08500 vs. NCBI nr
Match: KAG6578582.1 (Ribonuclease 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 499 bits (1286), Expect = 2.04e-178
Identity = 240/246 (97.56%), Postives = 243/246 (98.78%), Query Frame = 0


Query: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPA 60
           MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPC+KPA
Sbjct: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCKKPA 60

Query: 61  TPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120
           TPTFSI GFWPACSSG+ NCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER
Sbjct: 61  TPTFSISGFWPACSSGITNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120

Query: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180
           HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP
Sbjct: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180

Query: 181 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPSYNFKST 240
           QVECKSYKRIPLLSNIFLCFQYTA SSIHIVDCPLVTRCKFQAVLFPYDIFGPSYNFKST
Sbjct: 181 QVECKSYKRIPLLSNIFLCFQYTAASSIHIVDCPLVTRCKFQAVLFPYDIFGPSYNFKST 240

Query: 241 TLSNPH 246
           TL+NPH
Sbjct: 241 TLNNPH 246

[Close]

BLAST of Cp4.1LG13g08500 vs. NCBI nr
Match: XP_022939131.1 (ribonuclease 1-like [Cucurbita moschata])

HSP 1 Score: 496 bits (1277), Expect = 4.80e-177
Identity = 239/246 (97.15%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPA 60
           MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPC+KPA
Sbjct: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCKKPA 60

Query: 61  TPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120
           TPTFSI GFWPACSSG+ NCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER
Sbjct: 61  TPTFSISGFWPACSSGITNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120

Query: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180
           HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP
Sbjct: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180

Query: 181 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPSYNFKST 240
           QVECKSYKRIPLLSNIFLCFQYTA SSIHIVDCPLVTRCKFQAVLFP DIFGPSYNFKST
Sbjct: 181 QVECKSYKRIPLLSNIFLCFQYTAASSIHIVDCPLVTRCKFQAVLFPCDIFGPSYNFKST 240

Query: 241 TLSNPH 246
           TL+NPH
Sbjct: 241 TLNNPH 246

[Close]

BLAST of Cp4.1LG13g08500 vs. NCBI nr
Match: XP_022993703.1 (ribonuclease 1-like, partial [Cucurbita maxima])

HSP 1 Score: 490 bits (1261), Expect = 4.26e-174
Identity = 237/246 (96.34%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPA 60
           MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNS FFYLVQQWQISLCNLKPCQKPA
Sbjct: 33  MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSVFFYLVQQWQISLCNLKPCQKPA 92

Query: 61  TPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120
           TPTFSIYGFWPACSSG+PN KT TTFDPSK+SDLKNELDKEWPSLEEEENEK+WKKEWER
Sbjct: 93  TPTFSIYGFWPACSSGIPNRKTGTTFDPSKISDLKNELDKEWPSLEEEENEKMWKKEWER 152

Query: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180
           HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVY LENISDAIKAATGHTP
Sbjct: 153 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYVLENISDAIKAATGHTP 212

Query: 181 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPSYNFKST 240
           QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFP+DIFGPSYN KST
Sbjct: 213 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPFDIFGPSYNLKST 272

Query: 241 TLSNPH 246
           TLSNPH
Sbjct: 273 TLSNPH 278

[Close]

BLAST of Cp4.1LG13g08500 vs. NCBI nr
Match: XP_038890875.1 (ribonuclease 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 403 bits (1036), Expect = 3.32e-140
Identity = 195/234 (83.33%), Postives = 215/234 (91.88%), Query Frame = 0


Query: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPA 60
           MLILFL+FQLLG T++CQD IAS+NSSQ +S+GSG+ DFFYLVQQWQISLCNLKPCQKPA
Sbjct: 23  MLILFLLFQLLGVTISCQD-IASHNSSQLISKGSGDYDFFYLVQQWQISLCNLKPCQKPA 82

Query: 61  TPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120
            PTFSIYGFWP+ S G+PNCK  T FDPSKM DLKNELD+EWPSLE EENE++WKKEWER
Sbjct: 83  RPTFSIYGFWPS-SYGIPNCKIGTKFDPSKMLDLKNELDREWPSLEVEENEEMWKKEWER 142

Query: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180
           HGICSEPLL+QHA+FETALKLKQT+DLF ILANR IFPFGEVYGLENISDAI+ ATGHTP
Sbjct: 143 HGICSEPLLSQHAYFETALKLKQTFDLFIILANRGIFPFGEVYGLENISDAIRGATGHTP 202

Query: 181 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPS 234
           QVECKSYK IPLLSNIFLCFQYTATS IHIVDCPL+ RC FQA+LFP+D+FGPS
Sbjct: 203 QVECKSYKHIPLLSNIFLCFQYTATS-IHIVDCPLIRRCNFQAILFPFDLFGPS 253

[Close]

BLAST of Cp4.1LG13g08500 vs. ExPASy TrEMBL
Match: A0A6J1FF23 (ribonuclease 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445130 PE=3 SV=1)

HSP 1 Score: 496 bits (1277), Expect = 2.33e-177
Identity = 239/246 (97.15%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPA 60
           MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPC+KPA
Sbjct: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCKKPA 60

Query: 61  TPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120
           TPTFSI GFWPACSSG+ NCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER
Sbjct: 61  TPTFSISGFWPACSSGITNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120

Query: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180
           HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP
Sbjct: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180

Query: 181 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPSYNFKST 240
           QVECKSYKRIPLLSNIFLCFQYTA SSIHIVDCPLVTRCKFQAVLFP DIFGPSYNFKST
Sbjct: 181 QVECKSYKRIPLLSNIFLCFQYTAASSIHIVDCPLVTRCKFQAVLFPCDIFGPSYNFKST 240

Query: 241 TLSNPH 246
           TL+NPH
Sbjct: 241 TLNNPH 246

[Close]

BLAST of Cp4.1LG13g08500 vs. ExPASy TrEMBL
Match: A0A6J1K331 (ribonuclease 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489614 PE=3 SV=1)

HSP 1 Score: 490 bits (1261), Expect = 2.06e-174
Identity = 237/246 (96.34%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPA 60
           MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNS FFYLVQQWQISLCNLKPCQKPA
Sbjct: 33  MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSVFFYLVQQWQISLCNLKPCQKPA 92

Query: 61  TPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120
           TPTFSIYGFWPACSSG+PN KT TTFDPSK+SDLKNELDKEWPSLEEEENEK+WKKEWER
Sbjct: 93  TPTFSIYGFWPACSSGIPNRKTGTTFDPSKISDLKNELDKEWPSLEEEENEKMWKKEWER 152

Query: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180
           HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVY LENISDAIKAATGHTP
Sbjct: 153 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYVLENISDAIKAATGHTP 212

Query: 181 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPSYNFKST 240
           QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFP+DIFGPSYN KST
Sbjct: 213 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPFDIFGPSYNLKST 272

Query: 241 TLSNPH 246
           TLSNPH
Sbjct: 273 TLSNPH 278

[Close]

BLAST of Cp4.1LG13g08500 vs. ExPASy TrEMBL
Match: A0A6J1C1D3 (ribonuclease 1-like OS=Momordica charantia OX=3673 GN=LOC111006533 PE=3 SV=1)

HSP 1 Score: 394 bits (1011), Expect = 8.35e-137
Identity = 194/241 (80.50%), Postives = 213/241 (88.38%), Query Frame = 0


Query: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQ----PVSEG---SGNSDFFYLVQQWQISLCNL 60
           M +L L+ QLL RT++ Q+ IAS+NSSQ    PVSE    SGN DFFYLVQQWQ+SLCN+
Sbjct: 9   MFLLVLLLQLLVRTISRQN-IASHNSSQSLPQPVSEALLCSGNHDFFYLVQQWQVSLCNV 68

Query: 61  KPCQKPATPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKI 120
           KPCQKPA P FSIYGFWP+ SSG PNCK  TTFDPSK+ DLK ELD+EWPSLEEEENEK 
Sbjct: 69  KPCQKPARPIFSIYGFWPSSSSGTPNCKIGTTFDPSKILDLKEELDREWPSLEEEENEKE 128

Query: 121 WKKEWERHGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIK 180
           WKKEWERHGICSEPLLT+HAFFETALKLKQTYDLFN+LAN+AIFPFGEVYGLENISDAIK
Sbjct: 129 WKKEWERHGICSEPLLTEHAFFETALKLKQTYDLFNMLANKAIFPFGEVYGLENISDAIK 188

Query: 181 AATGHTPQVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGP 234
           AATGHTPQVEC+SYK IPLLSNIFLCFQYTATS I I+DCPL+TRC FQA+LFPYD+FGP
Sbjct: 189 AATGHTPQVECESYKHIPLLSNIFLCFQYTATS-IDIIDCPLITRCNFQAILFPYDLFGP 247

[Close]

BLAST of Cp4.1LG13g08500 vs. ExPASy TrEMBL
Match: A0A0A0KSB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636550 PE=3 SV=1)

HSP 1 Score: 370 bits (951), Expect = 1.23e-127
Identity = 181/234 (77.35%), Postives = 205/234 (87.61%), Query Frame = 0


Query: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPA 60
           MLILFL+FQLLG T++CQ+ IASYNSSQ  SEG+G  +FFYLVQQWQ+SLCNL+PCQKPA
Sbjct: 19  MLILFLLFQLLGITISCQN-IASYNSSQLFSEGNGEYEFFYLVQQWQVSLCNLRPCQKPA 78

Query: 61  TPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120
            PTFSI GF P+ S G+PNCK  T+FD SKM DLK ELD+EWPSLE EENE+IW+KEWE 
Sbjct: 79  IPTFSINGFRPS-SYGIPNCKIGTSFDSSKMLDLKTELDREWPSLEVEENEEIWRKEWEN 138

Query: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180
           HGICS+PLLTQHAFFETALKLKQT+D+F ILANR IFPFGEVY LENISDAI+ ATGHTP
Sbjct: 139 HGICSQPLLTQHAFFETALKLKQTFDIFTILANRGIFPFGEVYDLENISDAIRDATGHTP 198

Query: 181 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPS 234
           QVECKSYK+IPLLSNIFLCF+Y   ++IHIVDCPL+ RC FQA+LFPY  FGPS
Sbjct: 199 QVECKSYKQIPLLSNIFLCFKYN-DNAIHIVDCPLIRRCNFQAILFPYAQFGPS 249

[Close]

BLAST of Cp4.1LG13g08500 vs. ExPASy TrEMBL
Match: A0A1S3C9D7 (ribonuclease 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498487 PE=3 SV=1)

HSP 1 Score: 364 bits (934), Expect = 3.59e-125
Identity = 178/234 (76.07%), Postives = 202/234 (86.32%), Query Frame = 0


Query: 1   MLILFLIFQLLGRTVTCQDDIASYNSSQPVSEGSGNSDFFYLVQQWQISLCNLKPCQKPA 60
           MLILFL FQLL  T++CQ+ IASYNSSQ +SEG+G  DFFYLVQQWQ+SLCNL+PCQKPA
Sbjct: 11  MLILFLFFQLLAITISCQN-IASYNSSQLISEGNGEYDFFYLVQQWQVSLCNLRPCQKPA 70

Query: 61  TPTFSIYGFWPACSSGMPNCKTRTTFDPSKMSDLKNELDKEWPSLEEEENEKIWKKEWER 120
            PTFSI GF P+ S G+ +CK  T+FD SKM DLKNELD+EWPSLE EENE++WKKEWE 
Sbjct: 71  IPTFSINGFRPS-SHGISSCKIGTSFDSSKMLDLKNELDREWPSLEVEENEEMWKKEWES 130

Query: 121 HGICSEPLLTQHAFFETALKLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTP 180
           HGICS+PLLTQH+FFETALKLKQ +DLF ILANR IFPFGEVY LENIS+AI+ ATGHTP
Sbjct: 131 HGICSQPLLTQHSFFETALKLKQNFDLFTILANRGIFPFGEVYDLENISNAIRDATGHTP 190

Query: 181 QVECKSYKRIPLLSNIFLCFQYTATSSIHIVDCPLVTRCKFQAVLFPYDIFGPS 234
           QVEC+SYK IPLLSNIFLCFQY   ++IHIVDCPL+ RC FQA+LFPY  FGPS
Sbjct: 191 QVECQSYKNIPLLSNIFLCFQYNR-NAIHIVDCPLIRRCNFQAILFPYSQFGPS 241

[Close]

BLAST of Cp4.1LG13g08500 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 138.3 bits (347), Expect = 8.5e-33
Identity = 78/199 (39.20%), Postives = 105/199 (52.76%), Query Frame = 0


Query: 30  VSEGSGNSDFFYLVQQWQISLCNLK-----PCQKPATPTFSIYGFWPACSSGM--PNCKT 89
           VS    + DFFY V QW  + C+       P        F I+G WP  + G    NC  
Sbjct: 21  VSRPQEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIHGLWPNYNGGSWPSNCDP 80

Query: 90  RTTFDPSKMSDLKNELDKEWPSLEEEENE--KIWKKEWERHGICSEPLLTQHAFFETALK 149
            + FD S++SDL + L K WP+L    NE    W+ EWE+HG CSE ++ QH +FE ALK
Sbjct: 81  DSQFDRSQISDLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESVMDQHEYFENALK 140

Query: 150 LKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTPQVEC-KSYKRIPLLSNIFLC 209
           LKQ  +L  IL N  I P    Y L+ I++AIK   G TP +EC K  +R   L  I++C
Sbjct: 141 LKQKANLLQILKNSGINPDDGFYNLDKITNAIKDGIGFTPGIECNKDPERNAQLHQIYIC 200

Query: 210 FQYTATSSIHIVDCPLVTR 219
                TS    ++CP++ R
Sbjct: 201 VD---TSGTEFIECPVLPR 216

[Close]

BLAST of Cp4.1LG13g08500 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 132.9 bits (333), Expect = 3.6e-31
Identity = 81/209 (38.76%), Postives = 108/209 (51.67%), Query Frame = 0


Query: 31  SEGSGNSDFFYLVQQWQISLCNL-KPC-----QKPATPTFSIYGFWPACSSGM--PNCKT 90
           S  S + DFFY VQQW  S C+  K C      KPA   F I+G WP    G    NC  
Sbjct: 24  SSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAA-DFGIHGLWPNYKDGTYPSNCDA 83

Query: 91  RTTFDPSKMSDLKNELDKEWPSL--EEEENEKIWKKEWERHGICSEPLLTQHAFFETALK 150
              FD S +SDL   + K WP+L       E  W+ EWE+HG CSE ++ QH +F+TAL 
Sbjct: 84  SKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALN 143

Query: 151 LKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTPQVEC-KSYKRIPLLSNIFLC 210
           LKQ  +L   L    I P G+ Y LE+I D+IK + G TP VEC +       L  ++LC
Sbjct: 144 LKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLC 203

Query: 211 FQYTATSSIHIVDCPLVTRCKFQA-VLFP 228
              + +    +++CP+    K  A + FP
Sbjct: 204 VDRSGSG---LIECPVFPHGKCGAEIEFP 228

[Close]

BLAST of Cp4.1LG13g08500 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-29
Identity = 76/202 (37.62%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 38  DFFYLVQQWQISLCNLK-PCQKPAT----PTFSIYGFWPACSSG--MPNCKTRTTFDPSK 97
           DFFY V QW  + C+ +  C  P T      F I+G WP   +G    NC   + FD  +
Sbjct: 23  DFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPNYKTGGWPQNCNPDSRFDDLR 82

Query: 98  MSDLKNELDKEWPSLEEEENE--KIWKKEWERHGICSEPLLTQHAFFETALKLKQTYDLF 157
           +SDL ++L +EWP+L    N+  K W  EWE+HG C+E  L QH +FE  LKLKQ  +L 
Sbjct: 83  VSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKANLL 142

Query: 158 NILANRAIFPFGEVYGLENISDAIKAATGHTPQVEC-KSYKRIPLLSNIFLCFQYTATSS 217
           + L N  I P  + Y +++I + IK   G  P +EC K       L  I+LC     TS+
Sbjct: 143 HALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYLCVD---TSA 202

Query: 218 IHIVDCPLVT--RCKFQAVLFP 228
              ++CP++   RC    V FP
Sbjct: 203 SKFINCPVMPHGRCD-SRVQFP 220

[Close]

BLAST of Cp4.1LG13g08500 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein )

HSP 1 Score: 106.3 bits (264), Expect = 3.6e-23
Identity = 63/198 (31.82%), Postives = 94/198 (47.47%), Query Frame = 0


Query: 31  SEGSGNSDFFYLVQQWQISLCNLK-----PCQKPATPTFSIYGFWPACSSGM--PNCKTR 90
           S+   + +FFY V  W  ++C+ +     P +      F I+G WP  ++G     C   
Sbjct: 20  SQTEPDFNFFYWVNYWPGAICDSQKGCCPPTKGNTASDFIIHGLWPQFNNGTWPAFCDQT 79

Query: 91  TTFDPSKMSDLKNELDKEWPSLE----EEENEKIWKKEWERHGICSEPLLTQHAFFETAL 150
             FD SK+SDL  +++K+W              +W+ EW +HG C + +  QH++F T L
Sbjct: 80  NLFDISKISDLVCQMEKKWTEWGVWACPSNETNLWEHEWNKHGTCVQSIFDQHSYFRTNL 139

Query: 151 KLKQTYDLFNILANRAIFPFGEVYGLENISDAIKAATGHTPQVEC-KSYKRIPLLSNIFL 210
           K K    L NIL  + I P    Y L+ I +AIK A G  P +EC +  K    L  I++
Sbjct: 140 KFKHKVHLLNILIQKGIKPNDGFYSLDEIKNAIKCAIGFAPGIECNEDVKGNKQLFQIYI 199

Query: 211 CFQYTATSSIHIVDCPLV 217
           C    A      V+CP V
Sbjct: 200 CLDNYAK---EFVECPYV 214

[Close]

BLAST of Cp4.1LG13g08500 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 75.5 bits (184), Expect = 6.7e-14
Identity = 58/182 (31.87%), Postives = 84/182 (46.15%), Query Frame = 0


Query: 38  DFFYLVQQWQISLC--NLKPCQKPA------TPT-FSIYGFWPACSSG-MPNCKTRTTFD 97
           D+F L  QW  + C      C K A       PT F+I+G WP  + G  P+C  R+ F 
Sbjct: 33  DYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYRSDFK 92

Query: 98  PSKMSDLKNELDKEWPSLE-------EEENEKIWKKEWERHGICSEPLL-TQHAFFETAL 157
             ++S L + L+K WPSL               W  EWE+HG CS P+   ++ +F T L
Sbjct: 93  EKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTTL 152

Query: 158 KLKQTYDLFNILANRA-IFPFGEVYGLENISDAIKAATGHTPQVECKSYKRIPLLSNIFL 201
            L   +++ ++L     +    E Y L  I  AI+ A   TP+V CK       +  I +
Sbjct: 153 NLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKR----DAIDEIRI 210

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g08500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42813	5.0e-30	38.76	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
P80022	5.5e-29	38.62	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P42815	2.7e-28	37.62	Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1	[more]
P80196	1.4e-27	38.86	Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2	[more]
P23540	1.3e-22	30.77	Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1	[more]

BLAST of Cp4.1LG13g08500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550124.1	1.89e-183	100.00	ribonuclease 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6578582.1	2.04e-178	97.56	Ribonuclease 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022939131.1	4.80e-177	97.15	ribonuclease 1-like [Cucurbita moschata]	[more]
XP_022993703.1	4.26e-174	96.34	ribonuclease 1-like, partial [Cucurbita maxima]	[more]
XP_038890875.1	3.32e-140	83.33	ribonuclease 3-like isoform X1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG13g08500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FF23	2.33e-177	97.15	ribonuclease 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445130 PE=3 SV=1	[more]
A0A6J1K331	2.06e-174	96.34	ribonuclease 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489614 PE=3 SV=1	[more]
A0A6J1C1D3	8.35e-137	80.50	ribonuclease 1-like OS=Momordica charantia OX=3673 GN=LOC111006533 PE=3 SV=1	[more]
A0A0A0KSB0	1.23e-127	77.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636550 PE=3 SV=1	[more]
A0A1S3C9D7	3.59e-125	76.07	ribonuclease 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498487 PE=3 SV=1	[more]

BLAST of Cp4.1LG13g08500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14220.1	8.5e-33	39.20	Ribonuclease T2 family protein	[more]
AT2G02990.1	3.6e-31	38.76	ribonuclease 1	[more]
AT1G26820.1	2.0e-29	37.62	ribonuclease 3	[more]
AT1G14210.1	3.6e-23	31.82	Ribonuclease T2 family protein	[more]
AT2G39780.1	6.7e-14	31.87	ribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 38..202 e-value: 5.3E-40 score: 137.5
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 1..234
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 31..229 e-value: 8.9E-48 score: 165.0
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 34..221
None	No IPR available	PANTHER	PTHR11240:SF61	EXTRACELLULAR RIBONUCLEASE LE-LIKE ISOFORM X1	coord: 1..234
IPR033697	Ribonuclease T2, eukaryotic	CDD	cd01061	RNase_T2_euk	coord: 38..226 e-value: 5.58656E-52 score: 165.583

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g08500.1	Cp4.1LG13g08500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006401	RNA catabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding