Cp4.1LG13g08390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g08390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Expansin
Location	Cp4.1LG13: 8016994 .. 8018499 (-)
RNA-Seq Expression	Cp4.1LG13g08390
Synteny	Cp4.1LG13g08390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGGAAACAGCTATGGGCGTGTAATAAATAAGGGAAAGAGGCATTTAATAATAATGCACGTCAAATGGTAGAACATAGTCCATGTGCCTCTACCCCATCACTCATCTCTCTTTCACCCTTCCCTAATCAAACCCCACATTTCCCATCTCGACTCTGTTTTTTCAATCGGGTCTTGAATATAACTCAATTGGTTAATTATGGTGTGGTCGTCTCGACGTTTGAAATCTCAATAACGTCCATTAGATCTATATAATGTTACAAACGGTGTGTACTAACTTGACCATGACGTCCATGTCCATGCCCTCTATTTATTACCCTTTTAAGTCCCTCTTGTTTTCTTCATTTCCTCAAACCAATTCCATCTGACTCTGTTTTTGAAAATAAATTTCTGGCACTGAATGGCTTCATTGGGGATCATAATCCTCTTAGTGGGTGTTTCTTGGATGGTGTCGTGTGTTAATGGCGATTATGGGGGTTGGATCAACGCGCACGCCACTTTCTATGGTGGCAGTGATGCATCTGGGACAATGGGTTTGTTTTGGGTTATGTTAATGATGCCAATTAGTAAGAATTCAATGGTTTACTAATGTTGTTTGTTTGTTGTTGTTGTTGTTGTAACAGGGGGGGCTTGTGGGTATGGAAATTTATACAGCCAAGGGTATGGAACCAACACTGCAGCGCTAAGCACGGCGCTATTTGACAATGGCCTTAGCTGTGGCGCTTGCTTTGAGCTGCGCTGTGTCAACGACCCACAGTGGTGTATTCCAGGCACTATTGTTGTCACTGCCACTAACTTCTGCCCTCCTGGCGGCTGGTGCGACCCTCCCAACCACCATTTCGATCTCTCTCAGCCTATCTTCCAACACATTGCCCAATATCGTGCCGGAATTGTCCCCGTGGCTTACCGCAGGTACTCCTGTGGTGTAACTCATAAAGATTACTTCAAAATTTTAATTATAAACGTGAATTTTGCAGGGTAAGGTGCAGAAGAAGTGGGGGGATAAGATTTACAATCAACGGCCATTCATATTTCAATTTGGTACTAGTGACCAACGTGGGGGGTGCCGGGGATATACATTCAGTAGCGATTAAGGGTTCGAGGACCCGATGGCAACCCATGTCGAGAAATTGGGGCCAAAATTGGCAGTCCAACTCTTATCTGAACGGACAGAGTCTCTCCTTTCTGGTGACAGCCAGCGACGGGCGACAAGTGCTGTCCTACAACGTGGCTCCCTCCGGCTGGTCCTTCGGACAGACATACGTGGGCGCACAGTTCCGCTATTAATTCAACCTTTTTACGTATACATGCATATGCTGATATCTACCAAGCGAGCGAGCGAGAGAGAAAAAAAAAAAAAAAAAAAAAAAATTAAAACAGAATCAAGAATATTCCAATCCCCCAAATTCCAAAAAGGGTTTTTATGATTTAAAAAGATTCCCCTTTTTGGTTTTGTAGCTGTTCAGTTGATGGGGTTGAAGGGTTTGTTTGTTTGGCTGCTGAATTA

mRNA sequence

GGGGGAAACAGCTATGGGCGTGTAATAAATAAGGGAAAGAGGCATTTAATAATAATGCACGTCAAATGGTAGAACATAGTCCATGTGCCTCTACCCCATCACTCATCTCTCTTTCACCCTTCCCTAATCAAACCCCACATTTCCCATCTCGACTCTGTTTTTTCAATCGGGTCTTGAATATAACTCAATTGGTTAATTATGGTGTGGTCGTCTCGACGTTTGAAATCTCAATAACGTCCATTAGATCTATATAATGTTACAAACGGTGTGTACTAACTTGACCATGACGTCCATGTCCATGCCCTCTATTTATTACCCTTTTAAGTCCCTCTTGTTTTCTTCATTTCCTCAAACCAATTCCATCTGACTCTGTTTTTGAAAATAAATTTCTGGCACTGAATGGCTTCATTGGGGATCATAATCCTCTTAGTGGGTGTTTCTTGGATGGTGTCGTGTGTTAATGGCGATTATGGGGGTTGGATCAACGCGCACGCCACTTTCTATGGTGGCAGTGATGCATCTGGGACAATGGGGGGGGCTTGTGGGTATGGAAATTTATACAGCCAAGGGTATGGAACCAACACTGCAGCGCTAAGCACGGCGCTATTTGACAATGGCCTTAGCTGTGGCGCTTGCTTTGAGCTGCGCTGTGTCAACGACCCACAGTGGTGTATTCCAGGCACTATTGTTGTCACTGCCACTAACTTCTGCCCTCCTGGCGGCTGGTGCGACCCTCCCAACCACCATTTCGATCTCTCTCAGCCTATCTTCCAACACATTGCCCAATATCGTGCCGGAATTGTCCCCGTGGCTTACCGCAGCTGTTCAGTTGATGGGGTTGAAGGGTTTGTTTGTTTGGCTGCTGAATTA

Coding sequence (CDS)

ATGGCTTCATTGGGGATCATAATCCTCTTAGTGGGTGTTTCTTGGATGGTGTCGTGTGTTAATGGCGATTATGGGGGTTGGATCAACGCGCACGCCACTTTCTATGGTGGCAGTGATGCATCTGGGACAATGGGGGGGGCTTGTGGGTATGGAAATTTATACAGCCAAGGGTATGGAACCAACACTGCAGCGCTAAGCACGGCGCTATTTGACAATGGCCTTAGCTGTGGCGCTTGCTTTGAGCTGCGCTGTGTCAACGACCCACAGTGGTGTATTCCAGGCACTATTGTTGTCACTGCCACTAACTTCTGCCCTCCTGGCGGCTGGTGCGACCCTCCCAACCACCATTTCGATCTCTCTCAGCCTATCTTCCAACACATTGCCCAATATCGTGCCGGAATTGTCCCCGTGGCTTACCGCAGCTGTTCAGTTGATGGGGTTGAAGGGTTTGTTTGTTTGGCTGCTGAATTA

Protein sequence

MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIVPVAYRSCSVDGVEGFVCLAAEL

Homology

[Close]

BLAST of Cp4.1LG13g08390 vs. ExPASy Swiss-Prot
Match: Q9LDR9 (Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.1e-58
Identity = 107/148 (72.30%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60
           M  LG +++++ V  M S V+G  GGWINAHATFYGG DASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MGHLGFLVMIM-VGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPP--------GGWCDP 120
           +TAALSTALF+NGLSCG+CFE+RC ND +WC+PG+IVVTATNFCPP        GGWC+P
Sbjct: 61  STAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNP 120

Query: 121 PNHHFDLSQPIFQHIAQYRAGIVPVAYR 141
           P  HFDL+QP+FQ IAQYRAGIVPV+YR
Sbjct: 121 PLEHFDLAQPVFQRIAQYRAGIVPVSYR 147

[Close]

BLAST of Cp4.1LG13g08390 vs. ExPASy Swiss-Prot
Match: Q9C554 (Expansin-A1 OS=Arabidopsis thaliana OX=3702 GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.7e-58
Identity = 108/147 (73.47%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 3   SLGIIILLVGVSWMVSCVNG-DYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTN 62
           +L   + +  +  M S VNG   GGW+NAHATFYGG DASGTMGGACGYGNLYSQGYGTN
Sbjct: 2   ALVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 61

Query: 63  TAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPP--------GGWCDPP 122
           TAALSTALF+NGLSCGACFE+RC ND +WC+PG+IVVTATNFCPP        GGWC+PP
Sbjct: 62  TAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPP 121

Query: 123 NHHFDLSQPIFQHIAQYRAGIVPVAYR 141
             HFDLSQP+FQ IAQYRAGIVPVAYR
Sbjct: 122 QQHFDLSQPVFQRIAQYRAGIVPVAYR 148

[Close]

BLAST of Cp4.1LG13g08390 vs. ExPASy Swiss-Prot
Match: O80622 (Expansin-A15 OS=Arabidopsis thaliana OX=3702 GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 223.0 bits (567), Expect = 2.3e-57
Identity = 105/149 (70.47%), Postives = 122/149 (81.88%), Query Frame = 0


Query: 1   MASLGII-ILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYG 60
           M  +G++ I L   + MV  V+G   GW+NAHATFYGGSDASGTMGGACGYGNLYSQGYG
Sbjct: 3   MGKMGLLGIALFCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYG 62

Query: 61  TNTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPP--------GGWCD 120
           TNTAALSTALF+NGLSCGACFE++C +D  WC+PG I+VTATNFCPP        GGWC+
Sbjct: 63  TNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCN 122

Query: 121 PPNHHFDLSQPIFQHIAQYRAGIVPVAYR 141
           PP HHFDLSQP+FQ IAQY+AG+VPV+YR
Sbjct: 123 PPLHHFDLSQPVFQRIAQYKAGVVPVSYR 151

[Close]

BLAST of Cp4.1LG13g08390 vs. ExPASy Swiss-Prot
Match: Q38864 (Expansin-A5 OS=Arabidopsis thaliana OX=3702 GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.3e-55
Identity = 108/152 (71.05%), Postives = 117/152 (76.97%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDY-----------GGWINAHATFYGGSDASGTMGGACG 60
           M  L I +L+V +     CV G Y           G WINAHATFYGG DASGTMGGACG
Sbjct: 1   MGVLVISLLVVHLLAFSVCVQGGYRRGGHHPGGHMGPWINAHATFYGGGDASGTMGGACG 60

Query: 61  YGNLYSQGYGTNTAALSTALFDNGLSCGACFELRCVNDPQWCIPG-TIVVTATNFCPPGG 120
           YGNLYSQGYG  TAALSTALFD GLSCGACFEL CVNDPQWCI G +IVVTATNFCPPGG
Sbjct: 61  YGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPPGG 120

Query: 121 WCDPPNHHFDLSQPIFQHIAQYRAGIVPVAYR 141
            CDPPNHHFDLSQPI++ IA Y++GI+PV YR
Sbjct: 121 ACDPPNHHFDLSQPIYEKIALYKSGIIPVMYR 152

[Close]

BLAST of Cp4.1LG13g08390 vs. ExPASy Swiss-Prot
Match: Q9FMA0 (Expansin-A14 OS=Arabidopsis thaliana OX=3702 GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-53
Identity = 99/143 (69.23%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 6   IIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAAL 65
           II L + +  M   V+G   GW+NA ATFYGG+DASGTMGGACGYGNLYSQGYGTNTAAL
Sbjct: 8   IISLSLMMMIMWKSVDGYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAAL 67

Query: 66  STALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPP--------GGWCDPPNHHF 125
           STALF+ G SCGACF+++CV+DP+WCI GTI VT TNFCPP        GGWC+PP HHF
Sbjct: 68  STALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHF 127

Query: 126 DLSQPIFQHIAQYRAGIVPVAYR 141
           DL+QPIF  IAQY+AG+VPV YR
Sbjct: 128 DLAQPIFLRIAQYKAGVVPVQYR 150

[Close]

BLAST of Cp4.1LG13g08390 vs. NCBI nr
Match: XP_023549641.1 (expansin-A10-like [Cucurbita pepo subsp. pepo] >KAG7016131.1 Expansin-A5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301 bits (770), Expect = 2.10e-101
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60
           MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120
           NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS
Sbjct: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120

Query: 121 QPIFQHIAQYRAGIVPVAYR 140
           QPIFQHIAQYRAGIVPVAYR
Sbjct: 121 QPIFQHIAQYRAGIVPVAYR 140

[Close]

BLAST of Cp4.1LG13g08390 vs. NCBI nr
Match: XP_022938749.1 (expansin-A10-like [Cucurbita moschata])

HSP 1 Score: 298 bits (764), Expect = 1.72e-100
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60
           MASLGIIILLVGVSW VSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MASLGIIILLVGVSWTVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120
           NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS
Sbjct: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120

Query: 121 QPIFQHIAQYRAGIVPVAYR 140
           QPIFQHIAQYRAGIVPVAYR
Sbjct: 121 QPIFQHIAQYRAGIVPVAYR 140

[Close]

BLAST of Cp4.1LG13g08390 vs. NCBI nr
Match: XP_022993663.1 (expansin-A10-like [Cucurbita maxima])

HSP 1 Score: 297 bits (761), Expect = 4.93e-100
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60
           MASLGIIILL+GVSW VSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MASLGIIILLLGVSWTVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120
           NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS
Sbjct: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120

Query: 121 QPIFQHIAQYRAGIVPVAYR 140
           QPIFQHIAQYRAGIVPVAYR
Sbjct: 121 QPIFQHIAQYRAGIVPVAYR 140

[Close]

BLAST of Cp4.1LG13g08390 vs. NCBI nr
Match: KAG6578573.1 (Expansin-A5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276 bits (705), Expect = 9.93e-92
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 16  MVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFDNGLS 75
           MVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFDNGLS
Sbjct: 1   MVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFDNGLS 60

Query: 76  CGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIV 135
           CGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIV
Sbjct: 61  CGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIV 120

Query: 136 PVAYR 140
           PVAYR
Sbjct: 121 PVAYR 125

[Close]

BLAST of Cp4.1LG13g08390 vs. NCBI nr
Match: XP_038891244.1 (expansin-A10-like [Benincasa hispida])

HSP 1 Score: 267 bits (683), Expect = 3.78e-88
Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 16  MVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFDNGLS 75
           +VS VN DYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFDNGLS
Sbjct: 17  VVSSVNADYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFDNGLS 76

Query: 76  CGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIV 135
           CGACFELRCVNDPQWC+PGTIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIV
Sbjct: 77  CGACFELRCVNDPQWCLPGTIVVTATNFCPPGGWCDPPNHHFDLSQPIFQHIAQYRAGIV 136

Query: 136 PVAYR 140
           PVAYR
Sbjct: 137 PVAYR 141

[Close]

BLAST of Cp4.1LG13g08390 vs. ExPASy TrEMBL
Match: A0A6J1FF05 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111444880 PE=3 SV=1)

HSP 1 Score: 298 bits (764), Expect = 8.34e-101
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60
           MASLGIIILLVGVSW VSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MASLGIIILLVGVSWTVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120
           NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS
Sbjct: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120

Query: 121 QPIFQHIAQYRAGIVPVAYR 140
           QPIFQHIAQYRAGIVPVAYR
Sbjct: 121 QPIFQHIAQYRAGIVPVAYR 140

[Close]

BLAST of Cp4.1LG13g08390 vs. ExPASy TrEMBL
Match: A0A6J1K2Y6 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111489588 PE=3 SV=1)

HSP 1 Score: 297 bits (761), Expect = 2.39e-100
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60
           MASLGIIILL+GVSW VSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MASLGIIILLLGVSWTVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120
           NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS
Sbjct: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120

Query: 121 QPIFQHIAQYRAGIVPVAYR 140
           QPIFQHIAQYRAGIVPVAYR
Sbjct: 121 QPIFQHIAQYRAGIVPVAYR 140

[Close]

BLAST of Cp4.1LG13g08390 vs. ExPASy TrEMBL
Match: A5BA94 (Expansin OS=Vitis vinifera OX=29760 GN=VIT_14s0108g01020 PE=3 SV=1)

HSP 1 Score: 266 bits (680), Expect = 4.58e-88
Identity = 128/148 (86.49%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60
           MA LG   LLVG+  MVS VNG YGGWINAHATFYGG DASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MALLGF--LLVGILSMVSAVNGYYGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120
           NTAALSTALF+NGLSCGACFELRCVNDPQWC+PGTIVVTATNFCPPGGWCDPP  HFDLS
Sbjct: 61  NTAALSTALFNNGLSCGACFELRCVNDPQWCLPGTIVVTATNFCPPGGWCDPPQQHFDLS 120

Query: 121 QPIFQHIAQYRAGIVPVAYR--SCSVDG 146
           QP+FQHIAQYRAGIVPVAYR  SC   G
Sbjct: 121 QPVFQHIAQYRAGIVPVAYRRVSCRKSG 146

[Close]

BLAST of Cp4.1LG13g08390 vs. ExPASy TrEMBL
Match: A0A438H8N0 (Expansin OS=Vitis vinifera OX=29760 GN=EXPA1_6 PE=3 SV=1)

HSP 1 Score: 265 bits (676), Expect = 1.86e-87
Identity = 125/140 (89.29%), Postives = 129/140 (92.14%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60
           MA LG   LLVG+  MVS VNG YGGWINAHATFYGG DASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MALLGF--LLVGILSMVSAVNGYYGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120
           NTAALSTALF+NGLSCGACFELRCVNDPQWC+PGTIVVTATNFCPPGGWCDPP  HFDLS
Sbjct: 61  NTAALSTALFNNGLSCGACFELRCVNDPQWCLPGTIVVTATNFCPPGGWCDPPQQHFDLS 120

Query: 121 QPIFQHIAQYRAGIVPVAYR 140
           QP+FQHIAQYRAGIVPVAYR
Sbjct: 121 QPVFQHIAQYRAGIVPVAYR 138

[Close]

BLAST of Cp4.1LG13g08390 vs. ExPASy TrEMBL
Match: A0A5B7CC95 (Expansin OS=Davidia involucrata OX=16924 GN=Din_046504 PE=3 SV=1)

HSP 1 Score: 263 bits (671), Expect = 9.07e-87
Identity = 124/140 (88.57%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60
           MA LG+  LLVG   MVS V G YGGWINAHATFYGG DASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MAFLGV--LLVGFLSMVSSVYGYYGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPPGGWCDPPNHHFDLS 120
           NTAALSTALFDNGLSCGACFE+RCVNDPQWC+PG IVVTATNFCPPGGWCDPPNHHFDLS
Sbjct: 61  NTAALSTALFDNGLSCGACFEIRCVNDPQWCLPGVIVVTATNFCPPGGWCDPPNHHFDLS 120

Query: 121 QPIFQHIAQYRAGIVPVAYR 140
           QP+F HIAQYRAGIVPVAYR
Sbjct: 121 QPVFLHIAQYRAGIVPVAYR 138

[Close]

BLAST of Cp4.1LG13g08390 vs. TAIR 10
Match: AT1G26770.1 (expansin A10 )

HSP 1 Score: 226.5 bits (576), Expect = 1.5e-59
Identity = 107/148 (72.30%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60
           M  LG +++++ V  M S V+G  GGWINAHATFYGG DASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MGHLGFLVMIM-VGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPP--------GGWCDP 120
           +TAALSTALF+NGLSCG+CFE+RC ND +WC+PG+IVVTATNFCPP        GGWC+P
Sbjct: 61  STAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNP 120

Query: 121 PNHHFDLSQPIFQHIAQYRAGIVPVAYR 141
           P  HFDL+QP+FQ IAQYRAGIVPV+YR
Sbjct: 121 PLEHFDLAQPVFQRIAQYRAGIVPVSYR 147

[Close]

BLAST of Cp4.1LG13g08390 vs. TAIR 10
Match: AT1G26770.2 (expansin A10 )

HSP 1 Score: 226.5 bits (576), Expect = 1.5e-59
Identity = 107/148 (72.30%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 1   MASLGIIILLVGVSWMVSCVNGDYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGT 60
           M  LG +++++ V  M S V+G  GGWINAHATFYGG DASGTMGGACGYGNLYSQGYGT
Sbjct: 11  MGHLGFLVMIM-VGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGT 70

Query: 61  NTAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPP--------GGWCDP 120
           +TAALSTALF+NGLSCG+CFE+RC ND +WC+PG+IVVTATNFCPP        GGWC+P
Sbjct: 71  STAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNP 130

Query: 121 PNHHFDLSQPIFQHIAQYRAGIVPVAYR 141
           P  HFDL+QP+FQ IAQYRAGIVPV+YR
Sbjct: 131 PLEHFDLAQPVFQRIAQYRAGIVPVSYR 157

[Close]

BLAST of Cp4.1LG13g08390 vs. TAIR 10
Match: AT1G69530.1 (expansin A1 )

HSP 1 Score: 225.3 bits (573), Expect = 3.4e-59
Identity = 108/147 (73.47%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 3   SLGIIILLVGVSWMVSCVNG-DYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTN 62
           +L   + +  +  M S VNG   GGW+NAHATFYGG DASGTMGGACGYGNLYSQGYGTN
Sbjct: 2   ALVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 61

Query: 63  TAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPP--------GGWCDPP 122
           TAALSTALF+NGLSCGACFE+RC ND +WC+PG+IVVTATNFCPP        GGWC+PP
Sbjct: 62  TAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPP 121

Query: 123 NHHFDLSQPIFQHIAQYRAGIVPVAYR 141
             HFDLSQP+FQ IAQYRAGIVPVAYR
Sbjct: 122 QQHFDLSQPVFQRIAQYRAGIVPVAYR 148

[Close]

BLAST of Cp4.1LG13g08390 vs. TAIR 10
Match: AT1G69530.3 (expansin A1 )

HSP 1 Score: 225.3 bits (573), Expect = 3.4e-59
Identity = 108/147 (73.47%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 3   SLGIIILLVGVSWMVSCVNG-DYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTN 62
           +L   + +  +  M S VNG   GGW+NAHATFYGG DASGTMGGACGYGNLYSQGYGTN
Sbjct: 2   ALVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 61

Query: 63  TAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPP--------GGWCDPP 122
           TAALSTALF+NGLSCGACFE+RC ND +WC+PG+IVVTATNFCPP        GGWC+PP
Sbjct: 62  TAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPP 121

Query: 123 NHHFDLSQPIFQHIAQYRAGIVPVAYR 141
             HFDLSQP+FQ IAQYRAGIVPVAYR
Sbjct: 122 QQHFDLSQPVFQRIAQYRAGIVPVAYR 148

[Close]

BLAST of Cp4.1LG13g08390 vs. TAIR 10
Match: AT1G69530.2 (expansin A1 )

HSP 1 Score: 225.3 bits (573), Expect = 3.4e-59
Identity = 108/147 (73.47%), Postives = 120/147 (81.63%), Query Frame = 0


Query: 3   SLGIIILLVGVSWMVSCVNG-DYGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTN 62
           +L   + +  +  M S VNG   GGW+NAHATFYGG DASGTMGGACGYGNLYSQGYGTN
Sbjct: 2   ALVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 61

Query: 63  TAALSTALFDNGLSCGACFELRCVNDPQWCIPGTIVVTATNFCPP--------GGWCDPP 122
           TAALSTALF+NGLSCGACFE+RC ND +WC+PG+IVVTATNFCPP        GGWC+PP
Sbjct: 62  TAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPP 121

Query: 123 NHHFDLSQPIFQHIAQYRAGIVPVAYR 141
             HFDLSQP+FQ IAQYRAGIVPVAYR
Sbjct: 122 QQHFDLSQPVFQRIAQYRAGIVPVAYR 148

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g08390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDR9	2.1e-58	72.30	Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1	[more]
Q9C554	4.7e-58	73.47	Expansin-A1 OS=Arabidopsis thaliana OX=3702 GN=EXPA1 PE=2 SV=1	[more]
O80622	2.3e-57	70.47	Expansin-A15 OS=Arabidopsis thaliana OX=3702 GN=EXPA15 PE=2 SV=2	[more]
Q38864	1.3e-55	71.05	Expansin-A5 OS=Arabidopsis thaliana OX=3702 GN=EXPA5 PE=2 SV=1	[more]
Q9FMA0	1.2e-53	69.23	Expansin-A14 OS=Arabidopsis thaliana OX=3702 GN=EXPA14 PE=2 SV=1	[more]

BLAST of Cp4.1LG13g08390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549641.1	2.10e-101	100.00	expansin-A10-like [Cucurbita pepo subsp. pepo] >KAG7016131.1 Expansin-A5 [Cucurb...	[more]
XP_022938749.1	1.72e-100	99.29	expansin-A10-like [Cucurbita moschata]	[more]
XP_022993663.1	4.93e-100	98.57	expansin-A10-like [Cucurbita maxima]	[more]
KAG6578573.1	9.93e-92	100.00	Expansin-A5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038891244.1	3.78e-88	96.80	expansin-A10-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG13g08390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FF05	8.34e-101	99.29	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111444880 PE=3 SV=1	[more]
A0A6J1K2Y6	2.39e-100	98.57	Expansin OS=Cucurbita maxima OX=3661 GN=LOC111489588 PE=3 SV=1	[more]
A5BA94	4.58e-88	86.49	Expansin OS=Vitis vinifera OX=29760 GN=VIT_14s0108g01020 PE=3 SV=1	[more]
A0A438H8N0	1.86e-87	89.29	Expansin OS=Vitis vinifera OX=29760 GN=EXPA1_6 PE=3 SV=1	[more]
A0A5B7CC95	9.07e-87	88.57	Expansin OS=Davidia involucrata OX=16924 GN=Din_046504 PE=3 SV=1	[more]

BLAST of Cp4.1LG13g08390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26770.1	1.5e-59	72.30	expansin A10	[more]
AT1G26770.2	1.5e-59	72.30	expansin A10	[more]
AT1G69530.1	3.4e-59	73.47	expansin A1	[more]
AT1G69530.3	3.4e-59	73.47	expansin A1	[more]
AT1G69530.2	3.4e-59	73.47	expansin A1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 124..137 score: 73.33 coord: 57..71 score: 86.22 coord: 107..124 score: 67.59 coord: 96..106 score: 84.24 coord: 84..95 score: 55.56
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 66..84 score: 67.76 coord: 26..41 score: 68.91 coord: 44..62 score: 78.29 coord: 132..148 score: 36.62
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 62..139 e-value: 3.2E-47 score: 172.9
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 45..149 score: 27.024632
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 13..143 e-value: 5.9E-43 score: 148.3
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 26..145
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 62..139 e-value: 1.5E-23 score: 82.9
None	No IPR available	PANTHER	PTHR31867	EXPANSIN-A15	coord: 10..144
None	No IPR available	PANTHER	PTHR31867:SF144	EXPANSIN-A5	coord: 10..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g08390.1	Cp4.1LG13g08390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0080022	primary root development
biological_process	GO:0009826	unidimensional cell growth
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane