Cp4.1LG13g08380 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g08380
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ribosomal protein L34e superfamily protein
Location	Cp4.1LG13: 7985733 .. 7997357 (-)
RNA-Seq Expression	Cp4.1LG13g08380
Synteny	Cp4.1LG13g08380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTAAAGGAAAAAGAGGTGGGCCAAGGCCCATGGAGTGGCCCACCAAATCATTCCCACATCATGAAAGGAGAAATCCAAAGCCCATAAGCTGAAGGGAGTAGCCCTCCTTGCAAGCTTTCCTTCATCCTCTGACTTTCCCCATTGCCATTTCCCAAAATTTTCAACCTTTTTTTTTCTTTCTTTTTCATTTTCTTGTTCGTTTTCCTTCAGAGATGTGGCTTCGAACCTCCAAATCACGCTCTCTCCACTCTTTGCTTCTTCATTTTGTGCCTCCGTTTCTTTGGTTTTAATCTGTTCTGCCCCCATTAGCTCCTTTGTTTTTTTGGGTTTAATCGCGCTTTCGATTCGATTGAGGAGTTGGATTGGTTTAGGCGCCGACAAATTTCTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTGGTAATACCCTCTTTTCGATTTGGATTTCCCCCCTGAGTTGTTCGATCTGATATCGGGGTCTGATTGATTGCTGGAGATGATCTGTGTTTGATTGAATCGGGTAGTTTCAATCGCTGTTTGATTGGAATTTGGTTTGAGATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCATTATGGCGAGTTCAGTGAATTTAGCCGATTCGAGTTTCAAATCCAGGAACAAGAAGATGACTCCCTCATCGACTTGTTCGAAATTTCCCGTTTGTCATCGGTCTCGATCGGCCGTCATCGATATTGTGATTTTGATTGCTGTCGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTCTTATTGTTGAATCCCTCGAGATTTTCGGTGCGATTCTGTATTTAATGGGAGATGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTGGGATTTTCTGTGCTTTATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGAAATCCCTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGACATCCAATTGGAGACGGAGGAGTGCGTGAAGAACTCTACTCCATTGGTTAAAAATGGCGTGAAGAAGGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAGTTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGGGCAGTGCTCATATTTCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATAGTAGTATTAATAATCAATATTGTTTAAAGCTTATAGATAGGATATCATTACAGGTTTACTCAGTATGCAGAGAAGAATTTTCTTATTCTTGTGGAAAAAGATTAAGAACGTTCAATGTCTCTAAATAAGCTCATGGCAGACAGGTGTAAGGAACATATACAGTTTTCAAGTAGGGAATATACAATCCTTGTTGCATCATCTCGATGTGCTCTCTTATTTCCATATGTCCTGCTGCTATTTACTTCTTCAATCCATTTGTTTTGTCTTTTTTTTATGTTCATACTCATGAATTACACTTCTAGTTGAAACATATGCATGTTGGTGATCACGGTAGTATTATCAGACGATTCGAGTATTGTGTGGCTATGTGTGATTGTTAACTTGCAAATGGAAGAAGATCAGGCCTCTCCTCTAGATTTAGAGTCCTTGATGGATTACTTTGATTGTTAACTTGCAAAATATTAGTACCTGGCTTGTTTCATAACTCGTGGTCTGTTGCATCAGTGTCTGCTCGTCTCGTTTCGATATCCCTAAGACGACATGGCTTTGTTTGATAGTATTTCTTTATTAGGCTTTCTGAAAGGTATGGTGTAGTCATTGTTACAAGGGTGAAGACAAGCTATGTTAACAGTTGTAGATATAGCATTTCTGCTGCTGCTGCTGATACCAACCATCCTAATCATAGTAAAGAGCAGGTAGTGTTCTTCTTTTACTTTCTGAGCTTGCAAGTCCTGATGAGTCTTTTATCTCGAACCTATATGCTTTCCTTTCTACGTTGTGATGTCCCACATTGGTAAGGGTGTGGAAACCTTTCCCAAGCAGACGGCTTTCAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCAGTGGATCGGTAGAATCCATGTTTCATGTACTAAAATTCTCTTATTCTCTTCACTTTTCTAAGAACTGAAACTCAGGTCATTCATGCCCGTCTTGAGAGAAGCTTTGATCAATATGCCATGCCTCCATCTCTATTACCCTCCTATCTGGATTTTCTGCCCATCACTTTCTACATATTAGTTCACAAGAAGCTGTTTATAAATGTAGATTTGATGATGCACCGAAGATACTGCAGCATATTGCTTCTCTACTATCAAAGCTCATATTAAATGGCTGGCAAACTCCATATGGGTCTATGTTCTGTGAAAGCTCTGGACTGATGTGCATCCAACTTAGGTTTTAGAACTGCTGCAATCTGGGCTGGTGTAACTGAAAGGGAATCAGGCATCCTCCCTTCCATGACTTGTAGGGAAGAACGGACGAAAAGGGAAGAAATTTGATGCCCAGATACAACACCAGAATGCATTTTAATGAGATCGAAACATTTGTATGCAGGATTATAGGTCATTCTTGTAGCATCTTCGAAAGAAAGTTGGTTCGTTGCATTTCGAGTAGTTTGTTACTGAACTGAACTCCTTCCTTGACTTCCCTCCCGAGAGTTATTCGTGCACCTTGACATTTGAGTTTAATCGGGTAATGATTGAATCCAACTACAAAATGAAATATGTTATTGAAACTTTTAAAATTTTAATTATTTTCGAGAAACAATAGATAATTATCAATTTAGCCTGAGTGATAGAGATGATCTTTAGCTATAAAAATTGAGTTCTTTTTCAAAAAAAATGGATGATTTTTATTTTTTTTATTTTTTATTGAATGGAGAAAAATCGGAGGCTATATTGATAAAAGCAAGACGTAAAAGCCCGGGTTCGCTGTTGAGAAGAAGCTAAGTATCAACCAGCAGAGTGGCCCTGGGCGGAGTACTCGATGGTGTCCTCGCTTTAGAATGCAGTTTCATCCTTTGAATCAACCGCGTTTTCTCCTTCCGGTCTTTGTAATTCATCCAATTTCAGGAGATTCGTCAGCTTCCTAATCTCTCGAGGTAACTTCCCCAACCTCCGCCATTCTAGATTCGACGAACCTCTTTCAAAACTATGTTTATGATCGGCTTCAATGTAGCTCCACATCGTACGTAATTCACAAGAAAATTACGTAATTCACTTTTCGTTTGAACTAGGGCTACGGCCACAACCCGAACCTAAAACCTTCGGAAGTCGATCCGGACAGAACCTGGTTTTATGTAAGAGATACCGAGATGCACTTGAGATCTTTGATATTTTTGAGCTAGAGGACGGTTATGATGTTGGTAATAGCACGTTCGACACGAATTAATGCGTTTTTTTGGCTTGTAATCTGTAAGAGGGGGTGAGGAGGTTGTGTAATTACATGATTGACAATGGATTTGAACCCGATCAATACATGAGGAACAGGATTGTACTTATGCATGTGAAGTGCCGGATGATGGTTGATGCCTGTAGACTGTTCAATGAAATGCTCGAAAGGGATGCGGCTTTGTGGAATACCATAGTTTCCAGGTATGTGGACTCTGGAAATTACGAAGAGGCGTTTGGGCTGTTCATCATGATGTGGAACGAGTATTCTAATTGTACTTCAGAGCAAACGTCATTGCAGATTGTGCAGAGCCATCGCGTTTGTGGTGACTGCGATTCTGCGATCAAGCTGATTGCTAAGATAACCAAACGTGAAATTGTGATCAGAGATGCTAGCAGATTCCATCGTTTCAGAGACGGGAGTTGCACTTTTGGAGACTAATGGTGATGCTGGTAAATCTCTGTCGCTTTCTTTTGTTTTTTCGTTTATTTTTGTAGGAACGGGTAATGTCTCTTCCATTCAATAGACATGATTACCTTTCTTTTTCAAGGGGTTATAATGAAATGAATCCATGGCGTACTCGTCCGAAACTTACATTGTGTTCTTCAACTTTTCTACAATTTCTCTATAGGAAGGTCCAGATAACTGCTAGAATTTTAATATCAATGGGTGCCCTGAAATTTGAACCTGGCTTATCTGAAAGAACAGAGAAGAAGAGGGATTTTCGTACCAATCAAACTTTTCATGAATTGATTCATTATTTACAACTTCAGAACTTGCCAAATCCCAGAAGAAACAAAAAAAAAAAATCATCACTGTCCCGATTTGCACATTTGAAGCCGAGGTTGTGCAGCAAATAATAAAACAATGACACTTCCAGAAAAAAAACCTATGGAATCAAAAACTAGTTGAAAAAGGACGAAAATGAAAATGACGAAGAATCTTCAGAACTCGGATCTTGTTCTTGCGTTGATGAGGCGTCAACTTCGACCGTAATTTCATCGTGAGATTCCGAATCGGAGTCCCCCGATCCATGCCCCAAGCCCGATTCCACCGATTCTACATCCATTGGTTCACCGTCGTTAACCCATAGATTCACTACAACCACTCGGCCTTCGTCTCCTTCCATATCTTCATCATCGTCCTTCTTCCCTTCCTGATCGTCCACCGGCATCGTGAACCGACAAATCGGACACGTTCCACGAACCCTCAACCATTTCTCAATACAATCCGAATGATACAGATGTTTGCAAGGCATCTCTCTCGCCTCCGCCCCAACTTCAAATCCGTCCAAGCAAATCGCACAATCCATCCCCAATTCCGTAATCCCGACTCTCGGCATCGCATCGATCGAAGCCTTAGATGCAGGCAACGGCCCGGATTTCTCCGACAAGTCGCGGAGAAAAGACTCAAGAACATGACCTTCAAAAACGACGACCGTTCGGGCAGCATGATCGAGAACGACGATCTGGTTGAGGTGCGATCCAGGGGTGGTTCGGGCAAGGCCAAGCAGAAAGGGGAGAAGCATAGAGAGGCTGCGAGGCGGGGGCAGCGACGGCGGAGGAGAGGAAGAAGAGTCGGAATCGGACATGGTGGGTATGAGAGAAACTAGAAAGATGGGAAGAAACAGCAGAGTCAGAGACGAAAGGGAGTAATATATGAAAGAAGAAAGAAGGCGGCCATGGCGAAGAGAGATGAGAAGATTCTGGAAGATAATAGTTTGCTGATATGACGATCAGGTCAGGGCGTACGTAGGCACGGTGACCGACTTGACGGGCCACCACCGGACGGCTCTGAAGACGGTCCCATTATGACACCGTTGGCAAACACGGGAAGTCTACGCTTTATTCTCTACGCTTATTAATATATATATACACACACACACACTGTATTTTCCTTTTTTTAAAAAAAAAAAATTATTTTCCATTTTAGTTGATAATTGATTGATGGATTCATTCGTCCACTTGTTATTTATTGAATTATTTGGAGTTGATAATTATTTTCAATTTCCAGAAATTTGATTTTAGTTTTTTTTATATATATAAATTATAAATTGATTTTGGTTAATGAACAAAATGAATTTAAAATTTGACTATGAAATTTAGGATTAAAAAATTGAAAAAAAAAAAAAAGAAAAAAGAAGGAGAAAAGCCAGTAAAAAGCCGAGACAGAACCAAAACCAGAGCTGAAGGCGAAGGAGGGAAGAAAGAGTATCGAGAGAGCTTCCTTCTCTGTTGTTGAGTTGGGGTCTGGAGGATTCTTCTTCTGCTCCTTGCTCCCCAACAATCTAACTTCCATGACTTCCGTTGTGGATTTCTTGCATATGAATCGCTTCGATATCGTCCAGATTTATCGTCAATACTGTGGTAACACCTTTCTGCTCCTCCTCAGAATTCTCGATTCAGTTCATTTCTCTTGAATCTTCTCCGATGCCTTTTTCTATCCACAATTTGTTTCGTTATGCCTTTAGAATCTTAATATTTCTGCCCTTGGATGGATATCTGCTTCAATATTTGAGGATTTTCGGTATGTGTGTGTGTGTGTCTTTAATAGAAATCTTTGTCTGCGTCTGCTTGCTGATGTATGTTAGCTTAGAAGATATAGGTATGTCAAAGATTTGGATGTTTTTGTTTATCTTTTAGAAGATGGTTATTTGCTCACTGATTTTGGATGCTTAAGATGTTATGACGTATTTAGTCCGAAGAAGTCTAGGTGCCTTTATTTTTTGGAACCTGCATTAATAGTTTGGATGATAAAGAATGTAAAGGATTCAATTTATGGCGATTCTCTTGGCGAGTATGATGCATGAGTGTTAATTTCAATTTTCTGTTCTGGTTAGTCCGATTCCTTAGAGAACAAATGAGCACTGTAATTACTCGTAGGTTGTCGGAAGAATAATCCAAGAATTACTCATTTTTTGTCACTTTGTGAACATTTGATAAAATTGGAACAATGTATAGAGGATATGTGTGGCCCTTGCACAAGGATGGCGCAAACTTCGAGAAGGGATCCAAAGAAGGAATTAGTAATTATTGTTTTATGATTTCAGAGTCTGAATTGCAGCCCTTTAGGAGGAGAAGTTTGAGTTTTACTTAATCATTCCAGATTGATAATAGTAATATTGTTGTTATACTTTACTAAGAAATAAAATAGTTTCGCTTTTCTAGATGACAGAAAACCAGAATAAAAGGAGCCGAGAAAATGTGGGGTTGGTGGAGCTGAGTGGAAACACTAAACTCTATTGAAAGGAAGTAAAATAGTATCATGTTTTGGCTCTTGATCGTTTAGAATCATGCTACTTATATATGCTTATCACTTGTTCGTATGAATGTAATATGAATAAATGGTTATCATGTGCATGGGTTTCTTGTGACTGGCTTCCTATTTTTGTTTGAATGTATTACCTCTTAGTTGTCATGGAAAAAAGATCACGGTTCTGATATTTGAAACCCCCCTCATTGGTTGGACTATGAATTAATTGAACTCTAGTCTGATGTGCATTACGTTAGGAACTCAAATTAGCAATATAAGCGAGTCTTAACTTGTTTACAAACTTGTTTATAGATATTCGATCTCAAAATGGCCTTTATCATGGGAATGAAGACTCTGGACATGTTGAATCACAAATAGCTAAAAGTTCAAAGCAGGCTCTTGCAGAACTCTTCCTTTATGTGAAATCATCGCTGCAGATGGGGTATATCCCTTCAAACCTGTACTATAGCCCTCGAGTTGTTTTTTCAGATGCACTTTGTGTCAAATGGACCATGGTATTCTCGGATACGCAGAGTTACAAATCAATATTTTTTGTCCTTTCAAAGAAGATATTTTCCAAACATATTTTAACCAACTAAGATAATTTATCAACTCAATTATCAAACCAAGGTATTTTTTAATAGACATGGATGCTTGCTAGTTTGATTTCTTTAGTTCTGGGTCTAGTATTTTCTGGCAGTTGAATAAAAAGAAATGTTACATGGAGAAAAACAACTACACAGGTGCCAAATTTACATCTTGATAACGGAGGCCATCCTAAGTCATTTTTGTACTTCTGAAGCTGATCACAAGAAATAGCTGTTGATTACAGTATAAAAGTTTTTCTTATACTAACCTCGGTTATCTGAAAAGCATTTATTACATTGGCAGGAACTCAATTGTTGATGAACTAGCGAAGGTGATGTCACATCCAAACTTGATGGTAAACTCTTCCTTCCTAACAGTTTTCCTGGTTTCATACTATTCTCTGGTTTCCTTCAATTTGGCAAGCTTTTGCTATTAGCTGGTGGCAATATTTTTACTTTGTGCTTTGAATATGACAATTTTATTTTGTAGGTAGACTTCTCTGAATTTTCACGCTTTTACGAGTTTGTTTTTTTTGTGAGCCGTGAAAATGGTCAAAAGAATATCAGTAAGATTCCTTCTTTTGACTTGGATATAAAAGATATGTTTTGGTTTCCCAACATAGATAACATGAAATGTGCACTACGTAAGTCAAAGTTTCTCTTACATTCCGACAAGTTATTTAGTTTTTTATTTTATTTGAATTACAGCTGTTAGTAGGGCAGTTAGAGCATGGAGATTAGTTTTGGATGGGAGATTTCGGTTACTTAATCAATGGTGTGACTTTGTTGAGGTATCCTTTTTCCCCTTCTCTTTCTTTCCTTTTTATTTTAGAACTCAAGGACACAGTGATACAACCTACAGAAATATCTTGTTCAAATGAGGTATTTTTCTTTTGTTGAGGTACCCTTTTCCCCTCCTCTTTCGTTTGGTTATTTAAGCAGAATGATAATAATCAGGAAACCTGAATTTCTACCTGAAACTATTTTCATCGACTTGGGTTTATGGGGTCCAACAATTATGAAACTTACGTATATGCTAAATACCCATGAATGAACTTTCCTATGTAATTGTCCTCTGCAGACATGTTTGGATACACGTTCATATGTGTTTTACAAAAATGTATGCATTTGTCTCAATTTTTGAAGTAGATGAAATTGGGAAAATTTGGGAATTTTTATACCTAAGCTTTTAATCTATCTGATTTCTTCTATCTCGGTTTATGAATTTAAGTTATTTTTGTGGTTTTATTCTTCAATTCGTTCCATGAAATAGAATTGCGATGTAGTGCAACTTATCTCCAGGGTTCTGATCTATTTAAGTTCCATAGAACAATCAGCGACACAATATATCTGAGGATACTTGGCTGCAAGTCTTGGCTTTCAGCTGTTGTGTACATGAAAATCTGGAAGGGTATGACCCGGAAGGTATTTGTACTTTTTTTTTTTTAAAATAATTCTTAATGGAAGTATTTTCGTAGATATTATTTGAATTAAAAATGTTAAGACTTGGGAGTACGTCAAGCAATCCGCCTCCTTATAGCTGTTGAAGTTTTTTCAGTATAATTGAATTCTATCACAAGAAAAAGTATGTTGTCTATTTATATAAGAAAATTTTAATGCTTCACTTTCATGTTTAACCTTCTGTTTTGGTTCTTCTGTGGATGCTTGAAATATCATGAGAATGTGAATATTAATTGATCTCATCATGTTGTTATGGTGGCTTGGTATTATTATTTTGTTACCTCAACTGTAGGCTTAACGCCTAAAAAGGGTTTTGAGGTTTTGTGGCTTGGTATTATCATCGTGTTTAATAATTGCACAGTTCTATATTTTCTGAATTCATTAAAAAATTTCTAATTAACTTGAGGATTATGCCTCACTTCTCTTGAAGAAAGAGCCTTAAGACTACCCCCTTAAGTCTTTTGGAATGTTGGGTATGCTTTTAAATAAGCACAATATTTCTCTTTTTTTACTGTAATGTCTGGAGTTACTCAGTTGCGTTCTTCAATCAGGTGCTTGGCCTGTCCTAATTGATGACTTCGTCGAGCACATGTACAGGTTCGTATGTGGAGATTCTTACACATGCGATGAGTTTGAAGTTGCATGTGGTTAAATAATTCTGTCCTATATATCATTTTAAGACTGTCGTTTTTATCACTGAAGCCTTGTACTAACACTTGATATGCAGGCGGTCAGGATCTAATAAAATTTCAAAGTTATATTGTACTTGTGGAGACTCAGAATCACAGTCTGGTGTCTTTGAAGATTCTCTTCCTGGTATAGACTACGTTCAACTGTCAAAAAAAAAAAAAGTACTGTTTTACATACTGGACTTCCATGGCATGCAGAATGATATATAAGCCGTGTTTTACTGGTTTGGATTATGTCAGGATTGAAGTCTTTCCCTGGTTTGAAGAGGAAATTACCCGAGGACATGCAAGTGGACGGCATTATGTCTCTGAGTGACCCTAGAACCGGCTCCATGGAATTAATTCCTGTTACGAGCGTCAAGAAAAGTAGATTCATGGGTTGCAGGCCAGTGAACTTGGAGGTAAACTTACCGTCATGCACTGCAGATGCGAACACAGATATGGTTCGACCTAACGGTGCAGTAGGCTGCAAAGCTCCTTGTGCTATTGAAGGTTGTCTGTCAAAAGGTTTTGCTGGGCTTTTCTCGACATGTTCAGTCTTAGGATTGGATCAAGAAAGGAAAGCGTCATTCACGTGATCATCTCCGATTTAGCTCTAATGATTTTTACAGGTAGTATGTTCTATAATGTGGTTATATCTTTATTTTTTGTTGTGGTACAGCATTTTTAAACGGATGAGTTTGTGATTTGGCAGCAAACTAAATTCATAAACCCAGATAGAAGAAACGAGCTTGTAATTTCAATAGTTCATAGGGGAAACACCAAAAAGTTAGTGTAAACACCAAAAAGTTCATAGGGGAAACAGAAAACTAGTGGGGATTGCTTAAAGTAGTAGATTTGAAGTTGTAAGATGGACCAAAAATATCATAAGGGAAAAGGACGGCTTGGAATTTGCATCTTGTTACGAGGGGGCAGTCCACAATATGAATGGAAGATGTTGCAGTGTATTGGAAGCAAAGGAAGATGTTGGAGAGCAGAGGGATGCGTTTATATGACTTGCATTCCACTTGTGGAGTGTGCCCCGTCGCAGCTTTAATGGCATCACTTATGTTCTCTAACCCATACACCTCTCCAAATGGAAATATCGCTGCATCACAAACAACCATTCATCAGCATTGCCTTCTCCAAGTTAGTATCATTACTTTTTTTGTTTGGAAACACACACCTCTGTTTGCTAGGATATTGAAGAGATCATAAGTTTGCTTAAGCTTGAGTGCAGTTTCAAAGAAAGCATGCTGAGTGAGCAATGGTTCAGAACAAATTCCATGCCTTTCCCATTCTTTCTTCCATATCTTCTCATTCTCCTCCTCCTCAAGAGATGGCCATTCTTTATCTAACTCATTTTTCAGATCCGACATCTGTAAAAACCCATTTACAAAACAATACATCATATAATCCATATGAATCATCAAACCCTCTCTATATCTCTACAGAAAAGTACCTTTGAAGGGTCAAAAGTGGTTCTAGTTTTGCAATTGGGCATCCCAGAAGAACAAGCAGGCCAGAAGCCATAAATGCTGAAAGTGGGTGTTGCTGGCTTTTGACAAGGCTTCAAATTGCATAGAGAAATCTGCCACTGATGCTTACCATCAAATAGCCAGAAATTAGAAGAGAGATCGTGAGATTACCAAATGGGAACAAACAAAATTTGATTACCTGTTGAACAAGGTAAAAGAAGTCAGAGTTTCCACTGCCTTCTGAGACCGGCTGGATAGGTAAACAAAAGGGGATGTCAATTTCATCAACTCTGAATGGAAAGTATAAACAATTTAGTTTCAATACTCAATAATTACCTGTGAAGAGTTATATGATGCAATGTCGTCTTGACATGTTACGGTTCTACCAAGAAGCTGGAAGATGAGAAAGAGAATCAACATTGGAGTTGGACAATTGGGATGAAACTTCACTTGGATACTCAAAAATCTAGAGGCAAAACCTCTTATTATGTGCAAAGGAAACCAACCTCTGAGGACTTAATGACCTAATATACAGTTGGTTCAATTTAATGGGCAGATAGTCCTATCGAGATCCGCCGAAGAATTCCCTTCTAAATGGAGAATGAGAGAGAGAGGGAAAAAAGATTTTTCTCCCTTAGAGTCGAGAATATATTATATTTCTTGTCCTTGACCCTACCTCACTTTTTTTCAATTGAATTGCACTCCAAAGGGTAGGTTTAT

mRNA sequence

ATGGACATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCATTATGGCGAGTTCAGTGAATTTAGCCGATTCGAGTTTCAAATCCAGGAACAAGAAGATGACTCCCTCATCGACTTGTTCGAAATTTCCCGTTTGTCATCGGTCTCGATCGGCCGTCATCGATATTGTGATTTTGATTGCTGTCGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTCTTATTGTTGAATCCCTCGAGATTTTCGGTGCGATTCTGTATTTAATGGGAGATGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTGGGATTTTCTGTGCTTTATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGAAATCCCTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGACATCCAATTGGAGACGGAGGAGTGCGTGAAGAACTCTACTCCATTGGTTAAAAATGGCGTGAAGAAGGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAGTTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGGGCAGTGCTCATATTTCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATACATTTCTGCTGCTGCTGCTGATACCAACCATCCTAATCATAGTAAAGAGCAGGGCTACGGCCACAACCCGAACCTAAAACCTTCGGAAGTCGATCCGGACAGAACCTGGTTTTATGGGGTGAGGAGGTTGTGTAATTACATGATTGACAATGGATTTGAACCCGATCAATACATGAGGAACAGGATTGTACTTATGCATGTGAAGTGCCGGATGATGGTTGATGCCTGTAGACTGTTCAATGAAATGCTCGAAAGGGATGCGGCTTTGTGGAATACCATAGTTTCCAGGAAGGTCCAGATAACTGCTAGAATTTTAATATCAATGGGTGCCCTGAAATTTGAACCTGGCTTATCTGAAAGAACAGAGAAGAAGAGGGATTTTCGTACCAATCAAACTTTTCATGAATTGATTCATTATTTACAACTTCAGAACTTGCCAAATCCCAGAAGAAACAAAAAAAAAAAATCATCACTGTCCCGATTTGCACATTTGAAGCCGAGGTTGTGCAGCAAATAATAAAACAATGACACTTCCAGAAAAAAAACCTATGGAATCAAAAACTAGTTGAAAAAGGACGAAAATGAAAATGACGAAGAATCTTCAGAACTCGGATCTTGTTCTTGCGTTGATGAGGCGTCAACTTCGACCGTAATTTCATCGTGAGATTCCGAATCGGAGTCCCCCGATCCATGCCCCAAGCCCGATTCCACCGATTCTACATCCATTGGTTCACCGTCGTTAACCCATAGATTCACTACAACCACTCGGCCTTCGTCTCCTTCCATATCTTCATCATCGTCCTTCTTCCCTTCCTGATCGTCCACCGGCATCGTGAACCGACAAATCGGACACGTTCCACGAACCCTCAACCATTTCTCAATACAATCCGAATGATACAGATGTTTGCAAGGCATCTCTCTCGCCTCCGCCCCAACTTCAAATCCGTCCAAGCAAATCGCACAATCCATCCCCAATTCCGTAATCCCGACTCTCGGCATCGCATCGATCGAAGCCTTAGATGCAGGCAACGGCCCGGATTTCTCCGACAAGTCGCGGAGAAAAGACTCAAGAACATGACCTTCAAAAACGACGACCGTTCGGGCAGCATGATCGAGAACGACGATCTGGTTGAGGTGCGATCCAGGGGTGGTTCGGGCAAGGCCAAGCAGAAAGGGGAGAAGCATAGAGAGGCTGCGAGGCGGGGGCAGCGACGGCGGAGGAGAGGAAGAAGAGTCGGAATCGGACATGGTGGGTATGAGAGAAACTAGAAAGATGGGAAGAAACAGCAGAGTCAGAGACGAAAGGGAGTAATATATGAAAGAAGAAAGAAGGCGGCCATGGCGAAGAGAGATGAGAAGATTCTGGAAGATAATAGTTTGCTGATATGACGATCAGGTCAGGGCGTACGTAGGCACGGTGACCGACTTGACGGGCCACCACCGGACGGCTCTGAAGACGGTCCCATTATGACACCGTTGGCAAACACGGGAAGTCTACGCTTTATTCTCTACGCTTATTAATATATATATACACACACACACACTGTATTTTCCTTTTTTTAAAAAAAAAAAATTATTTTCCATTTTAGTTGATAATTGATTGATGGATTCATTCGTCCACTTGTTATTTATTGAATTATTTGGAGTTGATAATTATTTTCAATTTCCAGAAATTTGATTTTAGTTTTTTTTATATATATAAATTATAAATTGATTTTGGTTAATGAACAAAATGAATTTAAAATTTGACTATGAAATTTAGGATTAAAAAATTGAAAAAAAAAAAAAAGAAAAAAGAAGGAGAAAAGCCAGTAAAAAGCCGAGACAGAACCAAAACCAGAGCTGAAGGCGAAGGAGGGAAGAAAGAGTATCGAGAGAGCTTCCTTCTCTGTTGTTGAGTTGGGGTCTGGAGGATTCTTCTTCTGCTCCTTGCTCCCCAACAATCTAACTTCCATGACTTCCGTTGTGGATTTCTTGCATATGAATCGCTTCGATATCGTCCAGATTTATCGTCAATACTGTGATATTCGATCTCAAAATGGCCTTTATCATGGGAATGAAGACTCTGGACATGTTGAATCACAAATAGCTAAAAGTTCAAAGCAGGCTCTTGCAGAACTCTTCCTTTATGTGAAATCATCGCTGCAGATGGGGAACTCAATTGTTGATGAACTAGCGAAGGTGATGTCACATCCAAACTTGATGGTAGACTTCTCTGAATTTTCACGCTTTTACGAGTTTGTTTTTTTTGTGAGCCGTGAAAATGGTCAAAAGAATATCACTGTTAGTAGGGCAGTTAGAGCATGGAGATTAGTTTTGGATGGGAGATTTCGGTTACTTAATCAATGGTGTGACTTTGTTGAGAACAATCAGCGACACAATATATCTGAGGATACTTGGCTGCAAGTCTTGGCTTTCAGCTGTTGTGTACATGAAAATCTGGAAGGGTATGACCCGGAAGGTGCTTGGCCTGTCCTAATTGATGACTTCGTCGAGCACATGTACAGGCGGTCAGGATCTAATAAAATTTCAAAGTTATATTGTACTTGTGGAGACTCAGAATCACAGTCTGGTGTCTTTGAAGATTCTCTTCCTGGATTGAAGTCTTTCCCTGGTTTGAAGAGGAAATTACCCGAGGACATGCAAGTGGACGGCATTATGTCTCTGAGTGACCCTAGAACCGGCTCCATGGAATTAATTCCTGTTACGAGCGTCAAGAAAAGTAGATTCATGGGTTGCAGGCCAGTGAACTTGGAGGTAAACTTACCGTCATGCACTGCAGATGCGAACACAGATATGGTTCGACCTAACGGTGCAGTAGGCTGCAAAGCTCCTTGTGCTATTGAAGGTTGTCTGTCAAAAGGTTTTGCTGGGCTTTTCTCGACATGTTCAGTCTTAGGATTGGATCAAGAAAGGAAAGCGTCATTCACGTGATCATCTCCGATTTAGCTCTAATGATTTTTACAGCAAACTAAATTCATAAACCCAGATAGAAGAAACGAGCTTGTAATTTCAATAGTTCATAGGGGAAACACCAAAAAGTTAGTGTAAACACCAAAAAGTTCATAGGGGAAACAGAAAACTAGTGGGGATTGCTTAAAGTAGTAGATTTGAAGTTGTAAGATGGACCAAAAATATCATAAGGGAAAAGGACGGCTTGGAATTTGCATCTTGTTACGAGGGGGCAGTCCACAATATGAATGGAAGATGTTGCAGTGTATTGGAAGCAAAGGAAGATGTTGGAGAGCAGAGGGATGCGTTTATATGACTTGCATTCCACTTGTGGAGTGTGCCCCGTCGCAGCTTTAATGGCATCACTTATGTTCTCTAACCCATACACCTCTCCAAATGGAAATATCGCTGCATCACAAACAACCATTCATCAGCATTGCCTTCTCCAATTTCAAAGAAAGCATGCTGAGTGAGCAATGGTTCAGAACAAATTCCATGCCTTTCCCATTCTTTCTTCCATATCTTCTCATTCTCCTCCTCCTCAAGAGATGGCCATTCTTTATCTAACTCATTTTTCAGATCCGACATCTGTAAAAACCCATTTACAAAACAATACATCATATAATCCATATGAATCATCAAACCCTCTCTATATCTCTACAGAAAAGTACCTTTGAAGGGTCAAAAGTGGTTCTAGTTTTGCAATTGGGCATCCCAGAAGAACAAGCAGGCCAGAAGCCATAAATGCTGAAAGTGGGTGTTGCTGGCTTTTGACAAGGCTTCAAATTGCATAGAGAAATCTGCCACTGATGCTTACCATCAAATAGCCAGAAATTAGAAGAGAGATCGTGAGATTACCAAATGGGAACAAACAAAATTTGATTACCTGTTGAACAAGGTAAAAGAAGTCAGAGTTTCCACTGCCTTCTGAGACCGGCTGGATAGGTAAACAAAAGGGGATGTCAATTTCATCAACTCTGAATGGAAAGTATAAACAATTTAGTTTCAATACTCAATAATTACCTGTGAAGAGTTATATGATGCAATGTCGTCTTGACATGTTACGGTTCTACCAAGAAGCTGGAAGATGAGAAAGAGAATCAACATTGGAGTTGGACAATTGGGATGAAACTTCACTTGGATACTCAAAAATCTAGAGGCAAAACCTCTTATTATGTGCAAAGGAAACCAACCTCTGAGGACTTAATGACCTAATATACAGTTGGTTCAATTTAATGGGCAGATAGTCCTATCGAGATCCGCCGAAGAATTCCCTTCTAAATGGAGAATGAGAGAGAGAGGGAAAAAAGATTTTTCTCCCTTAGAGTCGAGAATATATTATATTTCTTGTCCTTGACCCTACCTCACTTTTTTTCAATTGAATTGCACTCCAAAGGGTAGGTTTAT

Coding sequence (CDS)

ATGGACATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCATTATGGCGAGTTCAGTGAATTTAGCCGATTCGAGTTTCAAATCCAGGAACAAGAAGATGACTCCCTCATCGACTTGTTCGAAATTTCCCGTTTGTCATCGGTCTCGATCGGCCGTCATCGATATTGTGATTTTGATTGCTGTCGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTCTTATTGTTGAATCCCTCGAGATTTTCGGTGCGATTCTGTATTTAATGGGAGATGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTGGGATTTTCTGTGCTTTATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGAAATCCCTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGACATCCAATTGGAGACGGAGGAGTGCGTGAAGAACTCTACTCCATTGGTTAAAAATGGCGTGAAGAAGGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAGTTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGGGCAGTGCTCATATTTCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATACATTTCTGCTGCTGCTGCTGATACCAACCATCCTAATCATAGTAAAGAGCAGGGCTACGGCCACAACCCGAACCTAAAACCTTCGGAAGTCGATCCGGACAGAACCTGGTTTTATGGGGTGAGGAGGTTGTGTAATTACATGATTGACAATGGATTTGAACCCGATCAATACATGAGGAACAGGATTGTACTTATGCATGTGAAGTGCCGGATGATGGTTGATGCCTGTAGACTGTTCAATGAAATGCTCGAAAGGGATGCGGCTTTGTGGAATACCATAGTTTCCAGGAAGGTCCAGATAACTGCTAGAATTTTAATATCAATGGGTGCCCTGAAATTTGAACCTGGCTTATCTGAAAGAACAGAGAAGAAGAGGGATTTTCGTACCAATCAAACTTTTCATGAATTGATTCATTATTTACAACTTCAGAACTTGCCAAATCCCAGAAGAAACAAAAAAAAAAAATCATCACTGTCCCGATTTGCACATTTGAAGCCGAGGTTGTGCAGCAAATAA

Protein sequence

MDMVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDIVILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLAAWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKKYISAAAADTNHPNHSKEQGYGHNPNLKPSEVDPDRTWFYGVRRLCNYMIDNGFEPDQYMRNRIVLMHVKCRMMVDACRLFNEMLERDAALWNTIVSRKVQITARILISMGALKFEPGLSERTEKKRDFRTNQTFHELIHYLQLQNLPNPRRNKKKKSSLSRFAHLKPRLCSK

Homology

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BLAST of Cp4.1LG13g08380 vs. ExPASy Swiss-Prot
Match: P0C8Q9 (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 PE=2 SV=3)

HSP 1 Score: 106.3 bits (264), Expect = 8.1e-22
Identity = 84/240 (35.00%), Postives = 118/240 (49.17%), Query Frame = 0


Query: 24  SSVNLADSSFKSRNKKMTPSS-------TCSKFPVCHRSRSAVIDIVILIAVVGACGFLL 83
           SS     ++ +  +  M PSS       + S   +C  S SA +D++ILI V+ +  FLL
Sbjct: 8   SSAASTTTAVEDNSTTMPPSSRSAANQNSSSSLHLCKHSPSATLDLLILILVLFSGTFLL 67

Query: 84  FPYMKLLIVESLEIFGA----------------ILYLMGDEVSR-----------APWIY 143
             Y   LI  SL +  +                I++   D  +             P   
Sbjct: 68  SSYFSYLI-HSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPAS 127

Query: 144 GSIGLGIFCALLAAWVVLIC--TSRKCGNPYCKGLRKAAEFDIQLETEECVKN-STPLVK 203
                 +F A   A++ L C   SRKC NP CKG++KA EFD+QL+TEECVK+ S   + 
Sbjct: 128 FFFAFAVFFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEID 187

Query: 204 NGVKKGLFELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIK 227
               KG  E   D+   L AEL+KMAP NGRAVLIFR++CGC + +LE  GP++  +  K
Sbjct: 188 RLPWKGGSESNPDYEC-LRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245

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BLAST of Cp4.1LG13g08380 vs. ExPASy Swiss-Prot
Match: Q9FK33 (Pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H58 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.5e-11
Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 268 VRRLCNYMIDNGFEPDQYMRNRIVLMHVKCRMMVDACRLFNEMLERDAALWNTIVS 324
           V+R+  +M+ NGFEP+QYM NRI+LMHVKC M++DA RLF+E+ ER+   + +I+S
Sbjct: 142 VKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIIS 197

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BLAST of Cp4.1LG13g08380 vs. ExPASy Swiss-Prot
Match: O82363 (Pentatricopeptide repeat-containing protein At2g46050, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E39 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 4.1e-05
Identity = 36/119 (30.25%), Postives = 55/119 (46.22%), Query Frame = 0


Query: 235 DTNHPNHSKEQGYGHNPNLKPSEVDPDRTWFYGVRRLCN-------------YMIDNGFE 294
           DTNH  H    G+ +   +  ++V  D   F G+ RLC               M+  G E
Sbjct: 118 DTNHRAH---LGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLE 177

Query: 295 PDQYMRNRIVLMHVKCRMMVDACRLFNEMLERDAALWNTIVSRKVQITARILISMGALK 341
              +    +V  + KC ++V+A R+F  +L+RD  LWN +VS  V +   I  + G LK
Sbjct: 178 SSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYV-LNGMIDEAFGLLK 232

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BLAST of Cp4.1LG13g08380 vs. ExPASy Swiss-Prot
Match: O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.4e-04
Identity = 31/121 (25.62%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 269 RRLCNYMIDNGFEPDQYMRNRIVLMHVKCRMMVDACRLFNEMLERDAALWNTIVSRKVQI 328
           +++  ++  +GF P   + NR++ M+ KC  +VDA ++F+EM  RD   WN +V+   ++
Sbjct: 105 KKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEV 164

Query: 329 TARILISMGALKFEPGLSERTEKKRDF----------RTNQTFHELIHYLQLQNLPNPRR 380
                   G L+    L +   +K  +          + +Q    L+ Y  +Q +PN R 
Sbjct: 165 --------GLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP 217

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BLAST of Cp4.1LG13g08380 vs. NCBI nr
Match: XP_023551693.1 (uncharacterized protein At5g19025-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449 bits (1154), Expect = 4.74e-156
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 62
           MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 63  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 122
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 123 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 182
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 183 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 227
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of Cp4.1LG13g08380 vs. NCBI nr
Match: XP_022938995.1 (uncharacterized protein At5g19025-like [Cucurbita moschata] >XP_022938997.1 uncharacterized protein At5g19025-like [Cucurbita moschata])

HSP 1 Score: 446 bits (1146), Expect = 7.81e-155
Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 62
           MVYFPYSISVCKSVDQPT MASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 63  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 122
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 123 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 182
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 180

Query: 183 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 227
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of Cp4.1LG13g08380 vs. NCBI nr
Match: XP_022993668.1 (uncharacterized protein At5g19025-like [Cucurbita maxima])

HSP 1 Score: 446 bits (1146), Expect = 7.81e-155
Identity = 224/225 (99.56%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 62
           MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 63  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 122
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 123 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 182
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELP DHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPCDHHR 180

Query: 183 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 227
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of Cp4.1LG13g08380 vs. NCBI nr
Match: KAG6578578.1 (hypothetical protein SDJN03_23026, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 444 bits (1143), Expect = 2.23e-154
Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 62
           MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 63  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 122
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 123 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 182
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 180

Query: 183 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 227
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPG RKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGSRKQLKKIKK 225

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BLAST of Cp4.1LG13g08380 vs. NCBI nr
Match: XP_004148702.1 (uncharacterized protein At5g19025 [Cucumis sativus])

HSP 1 Score: 435 bits (1118), Expect = 1.42e-150
Identity = 218/225 (96.89%), Postives = 221/225 (98.22%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 62
           MVYFPYSISVCKSVDQPT+MASSVNLADSS KSRNKKMT SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 60

Query: 63  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 122
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 123 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 182
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 183 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 227
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of Cp4.1LG13g08380 vs. ExPASy TrEMBL
Match: A0A6J1FFK9 (uncharacterized protein At5g19025-like OS=Cucurbita moschata OX=3662 GN=LOC111445040 PE=4 SV=1)

HSP 1 Score: 446 bits (1146), Expect = 3.78e-155
Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 62
           MVYFPYSISVCKSVDQPT MASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 63  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 122
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 123 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 182
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 180

Query: 183 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 227
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

[Close]

BLAST of Cp4.1LG13g08380 vs. ExPASy TrEMBL
Match: A0A6J1K2Z1 (uncharacterized protein At5g19025-like OS=Cucurbita maxima OX=3661 GN=LOC111489591 PE=4 SV=1)

HSP 1 Score: 446 bits (1146), Expect = 3.78e-155
Identity = 224/225 (99.56%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 62
           MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 63  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 122
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 123 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 182
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELP DHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPCDHHR 180

Query: 183 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 227
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

[Close]

BLAST of Cp4.1LG13g08380 vs. ExPASy TrEMBL
Match: A0A0A0KVL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636590 PE=4 SV=1)

HSP 1 Score: 435 bits (1118), Expect = 6.85e-151
Identity = 218/225 (96.89%), Postives = 221/225 (98.22%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 62
           MVYFPYSISVCKSVDQPT+MASSVNLADSS KSRNKKMT SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 60

Query: 63  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 122
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 123 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 182
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 183 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 227
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

[Close]

BLAST of Cp4.1LG13g08380 vs. ExPASy TrEMBL
Match: A0A5D3CWE1 (Putative Ribosomal protein L34e superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00180 PE=4 SV=1)

HSP 1 Score: 431 bits (1109), Expect = 1.60e-149
Identity = 216/225 (96.00%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 62
           MVYFPYSISVCKSVDQPT+MASSVNLADSS KSRNK+M  SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKRMPASSTCSKFPVCHRSRSAVIDI 60

Query: 63  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 122
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 123 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 182
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 183 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 227
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

[Close]

BLAST of Cp4.1LG13g08380 vs. ExPASy TrEMBL
Match: A0A1S3CAF3 (uncharacterized protein At5g19025 OS=Cucumis melo OX=3656 GN=LOC103498491 PE=4 SV=1)

HSP 1 Score: 431 bits (1109), Expect = 1.60e-149
Identity = 216/225 (96.00%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 62
           MVYFPYSISVCKSVDQPT+MASSVNLADSS KSRNK+M  SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKRMPASSTCSKFPVCHRSRSAVIDI 60

Query: 63  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 122
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 123 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 182
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 183 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 227
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

[Close]

BLAST of Cp4.1LG13g08380 vs. TAIR 10
Match: AT3G01170.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 265.0 bits (676), Expect = 9.7e-71
Identity = 142/228 (62.28%), Postives = 172/228 (75.44%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRN--KKMTPSSTCSKFPVCHRSRSAVI 62
           MVY   SISVC SVD P IM      + SS KSRN   K + S TCSKFPVC  S+SA I
Sbjct: 1   MVYLHSSISVCNSVD-PMIM------SHSSPKSRNTRNKSSSSPTCSKFPVCDGSQSAAI 60

Query: 63  DIVILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCAL 122
           D+VILIAV+ ACGFL FPY+KL+ ++S+E+F  +  L+  E+ + P +YGS+ L IFCA 
Sbjct: 61  DVVILIAVITACGFLFFPYVKLITLKSIEVFSDLSLLVKQEILQNPIVYGSLALSIFCAA 120

Query: 123 LAAW-VVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRD 182
           ++ W V+L+CT ++CG P CKGLRKA EFDIQLETEECVK+S+       K+G+FELPR 
Sbjct: 121 ISTWLVILLCTMQRCGKPNCKGLRKAVEFDIQLETEECVKSSSN------KRGMFELPRV 180

Query: 183 HHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 228
           HHRELEAELKKMAPPNGRAVL+FRARCGCSV RL V GP+KQ +KIKK
Sbjct: 181 HHRELEAELKKMAPPNGRAVLVFRARCGCSVRRLVVSGPKKQQRKIKK 215

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BLAST of Cp4.1LG13g08380 vs. TAIR 10
Match: AT5G15260.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 242.3 bits (617), Expect = 6.8e-64
Identity = 141/238 (59.24%), Postives = 173/238 (72.69%), Query Frame = 0


Query: 3   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSR----NKKMTPSSTCSKFPV-CHRSRS 62
           MVYF  SIS+   VDQ  IMA S +    S +SR    N+K + SS  S F V C  SRS
Sbjct: 1   MVYFQNSISL---VDQSPIMAHSPDFHHHSKQSRTSSSNRKSSSSSCSSNFSVCCDGSRS 60

Query: 63  AVIDIVILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSR--APWIYGSIGLG 122
           A ID+VILIAV+ + GFL+FPY+K + ++S+EIF  +  L+ +E+ R   P +YG I L 
Sbjct: 61  AAIDVVILIAVITSSGFLIFPYIKFITIKSVEIFSELSCLVKEEILRNPDPIVYGLIALS 120

Query: 123 IFCALLAAW--VVLICTSRKCGNPYCKGLRKA-AEFDIQLETEECVKNSTPLVKNGVKKG 182
           I C  L+AW  V+L+C+  +CG P CKGLRKA AEFDIQLETE+CVK+S    K+  KKG
Sbjct: 121 ISCTALSAWMIVILLCSRHRCGKPNCKGLRKANAEFDIQLETEDCVKSSNS-GKSVSKKG 180

Query: 183 LFELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRK---QLKKIKK 228
           LFELPRDHHRELEAELKKMAPPNGRAVL+FRA+CGCSVGRLEVPGP+K   Q +K+KK
Sbjct: 181 LFELPRDHHRELEAELKKMAPPNGRAVLVFRAKCGCSVGRLEVPGPKKQQLQQRKVKK 234

[Close]

BLAST of Cp4.1LG13g08380 vs. TAIR 10
Match: AT3G06180.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 2.1e-28
Identity = 81/213 (38.03%), Postives = 119/213 (55.87%), Query Frame = 0


Query: 29  ADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDIVILIAVVGACGFLLFPYMKL------ 88
           + +S  + N   + SS+ S   +C  S SA +D++ILI V+ +  FLL  Y         
Sbjct: 22  SSASRSASNHSSSSSSSSSSLHLCKHSPSATLDLLILILVLFSGAFLLSSYFSYLFHSFS 81

Query: 89  LIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLAAWVVLIC--TSRKCGNPYCK 148
           L+        ++++   +++S  P         +F A   A++ L C   SRKC NP CK
Sbjct: 82  LLSSHFPSLSSLIFSDDEDLSSIPPASYFFAFAVFFAASIAFLDLCCGPRSRKCRNPKCK 141

Query: 149 GLRKAAEFDIQLETEECVKN-STPLVKNGVKKGLFELPRDHHRELEAELKKMAPPNGRAV 208
           GL+KA EFD+QL+TEECVK+ +T  +     KG  E   D+   L AEL++MAPPNGRAV
Sbjct: 142 GLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNPDYEC-LRAELRRMAPPNGRAV 201

Query: 209 LIFRARCGCSVGRLEVPGPRKQLKKIKKYISAA 233
           L+FR+RCGC V +LE  GP++  +  K   + A
Sbjct: 202 LLFRSRCGCPVAKLEGWGPKRGRRHKKSQANLA 233

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BLAST of Cp4.1LG13g08380 vs. TAIR 10
Match: AT5G19025.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 5.8e-23
Identity = 84/240 (35.00%), Postives = 118/240 (49.17%), Query Frame = 0


Query: 24  SSVNLADSSFKSRNKKMTPSS-------TCSKFPVCHRSRSAVIDIVILIAVVGACGFLL 83
           SS     ++ +  +  M PSS       + S   +C  S SA +D++ILI V+ +  FLL
Sbjct: 8   SSAASTTTAVEDNSTTMPPSSRSAANQNSSSSLHLCKHSPSATLDLLILILVLFSGTFLL 67

Query: 84  FPYMKLLIVESLEIFGA----------------ILYLMGDEVSR-----------APWIY 143
             Y   LI  SL +  +                I++   D  +             P   
Sbjct: 68  SSYFSYLI-HSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPAS 127

Query: 144 GSIGLGIFCALLAAWVVLIC--TSRKCGNPYCKGLRKAAEFDIQLETEECVKN-STPLVK 203
                 +F A   A++ L C   SRKC NP CKG++KA EFD+QL+TEECVK+ S   + 
Sbjct: 128 FFFAFAVFFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEID 187

Query: 204 NGVKKGLFELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIK 227
               KG  E   D+   L AEL+KMAP NGRAVLIFR++CGC + +LE  GP++  +  K
Sbjct: 188 RLPWKGGSESNPDYEC-LRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245

[Close]

BLAST of Cp4.1LG13g08380 vs. TAIR 10
Match: AT5G50390.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 4.6e-12
Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 268 VRRLCNYMIDNGFEPDQYMRNRIVLMHVKCRMMVDACRLFNEMLERDAALWNTIVS 324
           V+R+  +M+ NGFEP+QYM NRI+LMHVKC M++DA RLF+E+ ER+   + +I+S
Sbjct: 142 VKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIIS 197

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g08380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8Q9	8.1e-22	35.00	Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 P...	[more]
Q9FK33	6.5e-11	55.36	Pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Arabidop...	[more]
O82363	4.1e-05	30.25	Pentatricopeptide repeat-containing protein At2g46050, mitochondrial OS=Arabidop...	[more]
O23169	3.4e-04	25.62	Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cp4.1LG13g08380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551693.1	4.74e-156	100.00	uncharacterized protein At5g19025-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938995.1	7.81e-155	99.11	uncharacterized protein At5g19025-like [Cucurbita moschata] >XP_022938997.1 unch...	[more]
XP_022993668.1	7.81e-155	99.56	uncharacterized protein At5g19025-like [Cucurbita maxima]	[more]
KAG6578578.1	2.23e-154	99.11	hypothetical protein SDJN03_23026, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004148702.1	1.42e-150	96.89	uncharacterized protein At5g19025 [Cucumis sativus]	[more]

BLAST of Cp4.1LG13g08380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFK9	3.78e-155	99.11	uncharacterized protein At5g19025-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1K2Z1	3.78e-155	99.56	uncharacterized protein At5g19025-like OS=Cucurbita maxima OX=3661 GN=LOC1114895...	[more]
A0A0A0KVL2	6.85e-151	96.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636590 PE=4 SV=1	[more]
A0A5D3CWE1	1.60e-149	96.00	Putative Ribosomal protein L34e superfamily protein OS=Cucumis melo var. makuwa ...	[more]
A0A1S3CAF3	1.60e-149	96.00	uncharacterized protein At5g19025 OS=Cucumis melo OX=3656 GN=LOC103498491 PE=4 S...	[more]

BLAST of Cp4.1LG13g08380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01170.1	9.7e-71	62.28	Ribosomal protein L34e superfamily protein	[more]
AT5G15260.1	6.8e-64	59.24	Ribosomal protein L34e superfamily protein	[more]
AT3G06180.1	2.1e-28	38.03	Ribosomal protein L34e superfamily protein	[more]
AT5G19025.1	5.8e-23	35.00	Ribosomal protein L34e superfamily protein	[more]
AT5G50390.1	4.6e-12	55.36	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 246..332 e-value: 1.9E-7 score: 32.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..254
None	No IPR available	PANTHER	PTHR46996:SF4	BNAC09G54710D PROTEIN	coord: 3..227
None	No IPR available	PANTHER	PTHR46996	OS05G0488500 PROTEIN	coord: 3..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g08380.1	Cp4.1LG13g08380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding