Cp4.1LG13g08100 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

BLAST of Cp4.1LG13g08100 vs. ExPASy Swiss-Prot
Match: Q8L6J3 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT2-TOM PE=2 SV=2)

HSP 1 Score: 1440.6 bits (3728), Expect = 0.0e+00
Identity = 724/1001 (72.33%), Postives = 838/1001 (83.72%), Query Frame = 0

Query: 3    STSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKFGI 62
            S  MW+ I KQ  S+  Q  L +   +R++  +G   +S+       D     SL     
Sbjct: 32   SPIMWRNIIKQLSSRTPQ-KLLFSSKNRTYSFLGFGQDSV-----FKDNTKFRSLIPISC 91

Query: 63   SELGIG---RSEVLSQEDYGSRFCFGSMGVRIGLNG-SFPKGYSSVAE--AVSSTDVDED 122
            S + +G     E L  +++ SR    +   ++  N     K Y+SVAE  AVSSTD +ED
Sbjct: 92   SNIVMGFQNLGEYLPGDEFLSRPLLKN---QVNSNDFCCRKSYASVAEAVAVSSTDAEED 151

Query: 123  SSIDEEIQELLQEMRKEEKRQVQRRRRRLKRV-KGMGEQKYQMLKRRQVAIETEAWKQAV 182
             S+ +E+QELL E++KEEK+Q   RRR+ + +  GMG +KYQ LKRRQV +ETEAW+QA 
Sbjct: 152  VSVVDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAA 211

Query: 183  KEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQL 242
            KEYKELL DMCEQKLAPNLPY+KSLFLGWFEPLRD I++EQEL   GK++AAYA Y  QL
Sbjct: 212  KEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQL 271

Query: 243  SADMMSVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKD 302
             ADMM+V+TMHKL+GLLM G +HG ARVVQAA  IGDAIEQEVRIH FLEK KK+K +KD
Sbjct: 272  PADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKD 331

Query: 303  NENNDKPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIE 362
             +  D  +   +EQE LRKKVTNL+KKQKL AV  IV+  DDSKPWG DAKAKVGSRLIE
Sbjct: 332  KQKED-GEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIE 391

Query: 363  LLTQTAYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLER 422
            LL QTAYIQPP +QLA  PPDIRPAF HS R V KE  K++SRRYG+I+CD LV  GLER
Sbjct: 392  LLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKE-TKSASRRYGIIQCDELVFKGLER 451

Query: 423  TARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFE 482
            TARHMVIPYMPMLVPPV WTGYDKGGH++LPS++MRT GA QQREAVKR  + QL PVFE
Sbjct: 452  TARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFE 511

Query: 483  ALDTLGNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKV 542
            ALDTLG+TKWRINK++LS++DRIW  GGRLADLVDRDD PLPE+PD+EDE L  KW+WKV
Sbjct: 512  ALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKV 571

Query: 543  KSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLC 602
            KSVKKEN ERHSQRCDIELKLAVARKMKDEEGF+YPHN+DFRGRAYPMHP+LNHLGSD+C
Sbjct: 572  KSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDIC 631

Query: 603  RGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLE 662
            RG+L FAEGRPL +SGLRWLKIHLANLFAGGV+KLS +GR+ F +NH++DIFDSAD+PLE
Sbjct: 632  RGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLE 691

Query: 663  GRRWWLNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLG 722
            GRRWWLNAEDPFQ LA C+NL+EA+R+SSPET ISHIP+HQDGSCNGLQHYAALGRD+LG
Sbjct: 692  GRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELG 751

Query: 723  AAAVNLAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTV 782
            AAAVNL   EKPADVYSGIAARVL+I+++DAQRDP  FPDA+RA+ L++QVDRKLVKQTV
Sbjct: 752  AAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTV 811

Query: 783  MTSVYGVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSW 842
            MTSVYGVTYIGAR+QIKRRLKER  I+DD+ELFG ACYAAK TLTALGEMFEAAR IM+W
Sbjct: 812  MTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTW 871

Query: 843  LGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRT 902
            LG+CAKIIASEN+PVRWTTPLGLPVVQPYRK+G+H++KTSLQ+LTLQQET+KV+VKRQRT
Sbjct: 872  LGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQRT 931

Query: 903  AFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYET 962
            AFPPNF+HSLDGSHMMMTAVAC++AGLNFAGVHDSYWTHACDVD++NRILREKFVELYET
Sbjct: 932  AFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYET 991

Query: 963  PILENLLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 997
            PILE LLE FQ S+P L FPPLPERG+ DL++VLESPYFFN
Sbjct: 992  PILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021

BLAST of Cp4.1LG13g08100 vs. ExPASy Swiss-Prot
Match: Q8VWF8 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT2 PE=2 SV=2)

HSP 1 Score: 1439.9 bits (3726), Expect = 0.0e+00
Identity = 721/1000 (72.10%), Postives = 837/1000 (83.70%), Query Frame = 0

Query: 3    STSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKFGI 62
            S  MW+ I KQ  S+  Q  L +   +R++  +G   +SI       D     SL     
Sbjct: 32   SPIMWRNIIKQLSSRTPQ-KLLFSSKNRTYSFLGFGQDSI-----FKDNTKFRSLIPISC 91

Query: 63   SELGIG---RSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAE--AVSSTDVDEDS 122
            S + +G     E L  +++ SR    +   ++  N    K Y+SVAE  AVSSTD +ED 
Sbjct: 92   SNIVMGFQNLGEYLPGDEFLSRPLIKN---QVNNNFCCRKSYASVAEAVAVSSTDAEEDV 151

Query: 123  SIDEEIQELLQEMRKEEKRQVQRRRRRLKRV-KGMGEQKYQMLKRRQVAIETEAWKQAVK 182
            S+ +E+ ELL E++KEEK+Q   RRR+ + +  GMG +KYQ LKRRQV +ETEAW+QA K
Sbjct: 152  SVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAK 211

Query: 183  EYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLS 242
            EYKELL DMCEQKLAPNLPY+KSLFLGWFEPLRD I++EQEL   GK++AAYA YF QL 
Sbjct: 212  EYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLP 271

Query: 243  ADMMSVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDN 302
            ADMM+V+TMHKL+GLLM G +HG ARVVQAA  IGDAIEQEVRIH FLEK KK+K +KD 
Sbjct: 272  ADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDK 331

Query: 303  ENNDKPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIEL 362
            +  D  +   +EQE LRKKVTNL+KKQKL AV  IV+  DDSKPWG DA+AKVGSRLI+L
Sbjct: 332  QKED-GEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDL 391

Query: 363  LTQTAYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERT 422
            L QTAYIQPP +QLA  PPDIRPAF HS R V KE  K++SRRYG+I+CD LV  GLERT
Sbjct: 392  LLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKE-TKSASRRYGIIQCDELVFKGLERT 451

Query: 423  ARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEA 482
            ARHMVIPYMPMLVPPV WTGYDKGGH++LPS++MRT GA QQREAVKR  + QL PVFEA
Sbjct: 452  ARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEA 511

Query: 483  LDTLGNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVK 542
            LDTLGNTKWRINK++LS+VDRIW  GGRLADLVDRDD PLPE+PD+EDE L  KW+WKVK
Sbjct: 512  LDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVK 571

Query: 543  SVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCR 602
            SVKKEN ERHSQRCDIELKLAVARKMKDEE F+YPHN+DFRGRAYPMHP+LNHLGSD+CR
Sbjct: 572  SVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICR 631

Query: 603  GILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEG 662
            G+LEFAEGRPL +SGLRWLKIHLANLFAGGV+KLS +GR+ F +NH++DIFDS+D+PLEG
Sbjct: 632  GVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEG 691

Query: 663  RRWWLNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGA 722
            RRWWLNAEDPFQ LA C+NL+EA+R+SSPET +SHIP+HQDGSCNGLQHYAALGRDKLGA
Sbjct: 692  RRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGA 751

Query: 723  AAVNLAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVM 782
            AAVNL   EKPADVYSGIAARVL+I+++DAQRDP  FPDA+RA+ L++QVDRKLVKQTVM
Sbjct: 752  AAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVM 811

Query: 783  TSVYGVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWL 842
            TSVYGVTYIGAR+QIKRRLKER  I+DD+ELFG ACYAAK TLTALGEMFEAAR IM+WL
Sbjct: 812  TSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWL 871

Query: 843  GDCAKIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTA 902
            G+CAKIIASEN+PVRWTTPLGLPVVQPYRK+G+H++KTSLQ+LTLQ+ET+KV+VKRQRTA
Sbjct: 872  GECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTA 931

Query: 903  FPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETP 962
            FPPNF+HSLDGSHMMMTAVAC++AGLNFAGVHDSYWTHACDVD++NRILREKFVELYE P
Sbjct: 932  FPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAP 991

Query: 963  ILENLLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 997
            ILE LLE FQ S+P L FPPLPERG+ D+++VLESPYFFN
Sbjct: 992  ILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020

BLAST of Cp4.1LG13g08100 vs. ExPASy Swiss-Prot
Match: Q93Y94 (DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT1 PE=2 SV=1)

HSP 1 Score: 1371.7 bits (3549), Expect = 0.0e+00
Identity = 704/1014 (69.43%), Postives = 813/1014 (80.18%), Query Frame = 0

Query: 6    MWKTIAKQAIS-KNRQFH----LDWHCLSRSHGVMGRL----NESIISEKL-ISDKFVLS 65
            MW+ I+KQA S K R  H    L +   S S G    L     ES  +  L +S   + S
Sbjct: 1    MWRYISKQAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSIFS 60

Query: 66   SLPK-----FGISE-------LGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSS 125
             + +      GI E       LG+ ++ + S      R C    G R   +  F + Y S
Sbjct: 61   RISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVC----GKRGSGSLGFLRSYGS 120

Query: 126  VAEAVSSTDVDEDSSIDEEIQELLQEMRKE-EKRQVQRRRRRLKRVKGMGEQKYQMLKRR 185
             AEA++ST  +ED    +EIQEL++EM KE E  +   + ++ K + GMG  KY +L+RR
Sbjct: 121  AAEAIASTS-EEDI---DEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRR 180

Query: 186  QVAIETEAWKQAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIG 245
            Q+ +ETEAW++A KEY+ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAI+ EQ+L   G
Sbjct: 181  QIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEG 240

Query: 246  KNRAAYAPYFDQLSADMMSVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHR 305
            KNR AYAP+FDQL A+MM+V+TMHKL+GLLM G   G+ARVVQAA  IG+AIE E RIHR
Sbjct: 241  KNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHR 300

Query: 306  FLEKMKKKKHDKDNENNDKPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWG 365
            FLEK  KK +    +  D P   +KE+E +RKKV  L+KKQKL  VR IVK  DD KPWG
Sbjct: 301  FLEK-TKKSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWG 360

Query: 366  PDAKAKVGSRLIELLTQTAYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGV 425
             D   KVG RLI++L +TAYIQPP DQL D PPDIRPAF H+ + V        SRRYGV
Sbjct: 361  QDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV---ETMKGSRRYGV 420

Query: 426  IECDPLVVNGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAV 485
            I+CDPLV  GL++TARHMVIPYMPMLVPP +W GYDKG ++FLPS+IMRT GA QQREAV
Sbjct: 421  IQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAV 480

Query: 486  KRTPKQQLTPVFEALDTLGNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDS 545
            KR PK+QL PVF+ALDTLGNTKWR+N+K+L IVDRIW SGGRLADLVDR+DVPLPE+PD+
Sbjct: 481  KRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDA 540

Query: 546  EDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYP 605
            EDE  +RKWKWKVK VKKEN ERHSQRCDIELKLAVARKMKDE+GFYYPHN+DFRGRAYP
Sbjct: 541  EDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYP 600

Query: 606  MHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNH 665
            MHPYLNHLGSDLCRGILEFAEGRPL KSGLRWLKIHLAN++ GGVDKLS++GR+ F +NH
Sbjct: 601  MHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENH 660

Query: 666  VEDIFDSADRPLEGRRWWLNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNG 725
            VEDIFDSA+RPLEG+RWWL AEDPFQ LA C+N+ EALR+ SPET IS++PIHQDGSCNG
Sbjct: 661  VEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNG 720

Query: 726  LQHYAALGRDKLGAAAVNLAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTL 785
            LQHYAALGRD LGAAAVNL   +KPADVYSGIAARVL+I+++DA +DP   P+ +RA+ L
Sbjct: 721  LQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLL 780

Query: 786  IDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTAL 845
            I+QVDRKLVKQTVMTSVYGVTYIGAR+QIKRRLKER VI DD ELF  ACYAAKTTLTAL
Sbjct: 781  INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTAL 840

Query: 846  GEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQ 905
            GEMFEAAR IMSWLGDCAKIIA EN PVRWTTPLGLPVVQPYRKLG+H++KTSLQ+LTLQ
Sbjct: 841  GEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQ 900

Query: 906  QETDKVLVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMN 965
            +ETDKV+VKRQRTAFPPNFVHSLDGSHMMMTA+ACK++GL+FAGVHDSYWTHA DVD+MN
Sbjct: 901  RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMN 960

Query: 966  RILREKFVELYETPILENLLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 997
            +ILREKFVELY+ PILENLLE FQQSFP L FPPLPERG+ DL+EVLESPYFFN
Sbjct: 961  KILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002

BLAST of Cp4.1LG13g08100 vs. ExPASy Swiss-Prot
Match: Q8L6J5 (DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT1-TOM PE=2 SV=2)

HSP 1 Score: 1370.1 bits (3545), Expect = 0.0e+00
Identity = 683/935 (73.05%), Postives = 782/935 (83.64%), Query Frame = 0

Query: 65   LGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFP--KGYSSVAEAVSSTDVDEDSSIDEE 124
            LG+ ++   S      R C G  G     +GS    + Y S AEA+ ST  +ED    +E
Sbjct: 82   LGLSQNSTFSSVKGDFRIC-GKRG-----SGSLGRLRSYGSAAEAIVSTS-EEDI---DE 141

Query: 125  IQELLQEMRKE-EKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKEL 184
            IQEL++EM KE E  +   + ++ K + GMG  KY  L+RRQ+ +ETEAW++A KEY+EL
Sbjct: 142  IQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQIKVETEAWEEAAKEYQEL 201

Query: 185  LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMMS 244
            LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAI+ EQ+L   GKNR AYAP+FDQL A+MM+
Sbjct: 202  LMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMA 261

Query: 245  VVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENNDK 304
            V+TMHKL+GLLM G   G+ARVVQAA  IG+AIE E RIHRFLEK  KK +    +  + 
Sbjct: 262  VITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEK-TKKSNALSGDLEET 321

Query: 305  PDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQTA 364
            P   +KE+E LRKKV  L+KKQKL  VR IVK  DD KPWG D   KVG RLI++L +TA
Sbjct: 322  PGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETA 381

Query: 365  YIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHMV 424
            YIQPP DQL DGPPDIRPAF H+ + V        SRRYGVI+CDPLV  GL++TARHMV
Sbjct: 382  YIQPPNDQLDDGPPDIRPAFVHTLKTV---ETMKGSRRYGVIQCDPLVRKGLDKTARHMV 441

Query: 425  IPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTLG 484
            IPYMPMLVPP +W GYDKGG++FLPS+IMRT GA QQREAVKR PK+QL PVF+ALDTLG
Sbjct: 442  IPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLG 501

Query: 485  NTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKKE 544
            NTKWR+N+K+L IVDRIW SGGRLADLVDR+DVPLPE PD+EDE  +RKWKWKVK VKKE
Sbjct: 502  NTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWKVKGVKKE 561

Query: 545  NMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILEF 604
            N ERHSQRCDIELKLAVARKMKDE+GFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEF
Sbjct: 562  NCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF 621

Query: 605  AEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWWL 664
            AEGRPL  SGLRWLKIHLAN++ GGVDKLS++GR+ F +NH+EDIFDSA+RPLEG+RWWL
Sbjct: 622  AEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPLEGKRWWL 681

Query: 665  NAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL 724
             AEDPFQ LA C+N+ EALR+ SPET IS++PIHQDGSCNGLQHYAALGRDKLGAAAVNL
Sbjct: 682  GAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNL 741

Query: 725  AVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVYG 784
               +KPADVYSGIAARVL+I+++DA +DP   P+ +RA+ LI+QVDRKLVKQTVMTSVYG
Sbjct: 742  VAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYG 801

Query: 785  VTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCAK 844
            VTYIGAR+QIK+RLKER VI DD ELF  ACYAAKTTLTALGEMFEAAR IMSWLGDCAK
Sbjct: 802  VTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAK 861

Query: 845  IIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPNF 904
            IIA EN PVRWTTPLGLPVVQPYRKLG+H++KTSLQ+LTLQ+ETDKV+VKRQRTAFPPNF
Sbjct: 862  IIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNF 921

Query: 905  VHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENL 964
            VHSLDGSHMMMTA+ACK++GL+FAGVHDSYWTHACDVD+MN+ILREKFVELY+ PILENL
Sbjct: 922  VHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENL 981

Query: 965  LEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 997
            LE FQQSFP L FPPLPERG+ DL+EVLESPYFFN
Sbjct: 982  LESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002

BLAST of Cp4.1LG13g08100 vs. ExPASy Swiss-Prot
Match: Q9LFV6 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPOT2 PE=1 SV=1)

HSP 1 Score: 1318.1 bits (3410), Expect = 0.0e+00
Identity = 670/999 (67.07%), Postives = 801/999 (80.18%), Query Frame = 0

Query: 3    STSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKFGI 62
            S  MW+ IAKQAIS++       +  S++ G++    ESI S+ L S +F +   P  G 
Sbjct: 37   SFPMWRNIAKQAISRSA---ARLNVSSQTRGLLVSSPESIFSKNL-SFRFPVLGSPCHGK 96

Query: 63   S---ELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVA-EAVSSTDVDEDSS 122
                  GI R E  S+    S  C         L+G+  +GY+SVA E V STDV+E+  
Sbjct: 97   GFRCLSGITRREEFSK----SERC---------LSGTLARGYTSVAEEEVLSTDVEEEPE 156

Query: 123  IDEEIQELLQEMRKEEKRQVQRRRRRLKRVK-GMGEQKYQMLKRRQVAIETEAWKQAVKE 182
            +D    ELL+EM+KE+KR+  R  R  K+ + GMG  K+Q L RRQV IETE W++A  E
Sbjct: 157  VD----ELLKEMKKEKKRESHRSWRMKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAE 216

Query: 183  YKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSA 242
            Y ELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAI+K+QEL R+GK++A YA Y DQL A
Sbjct: 217  YMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPA 276

Query: 243  DMMSVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNE 302
            D +SV+TMHKL+G LM G ++G  +VV AAC +GDAIEQE+RI  FL+K KKK  D +  
Sbjct: 277  DKISVITMHKLMGHLMTGGDNGCVKVVHAACTVGDAIEQEIRICTFLDK-KKKGDDNEES 336

Query: 303  NNDKPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELL 362
               + ++ +KEQ+ LRKKV  LIKKQKL AVR I++  D +KPW  D +AKVGSRLIELL
Sbjct: 337  GGVENETSMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELL 396

Query: 363  TQTAYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTA 422
             +TAYIQ P DQ  +  PD+RPAF H+F++   + + NS R+YGVIECDPLV  GLE++ 
Sbjct: 397  VRTAYIQSPADQQDNDLPDVRPAFVHTFKVA--KGSMNSGRKYGVIECDPLVRKGLEKSG 456

Query: 423  RHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEAL 482
            R+ V+PYMPMLVPP+ W+GYDKG ++FL S+IM+T GA QQREA+K  PK QL PVFEAL
Sbjct: 457  RYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEAL 516

Query: 483  DTLGNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKS 542
            DTLG+TKWR+NK++L++VDRIW+SGG +AD+VDR DVPLPEKPD+EDE +L+KWKW+VKS
Sbjct: 517  DTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKS 576

Query: 543  VKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRG 602
             KK N ERHSQRCD ELKL+VARKMKDEE FYYPHN+DFRGRAYPM P+LNHLGSDLCRG
Sbjct: 577  AKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRG 636

Query: 603  ILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGR 662
            +LEFAEGRP+  SGLRWLKIHLANL+AGGVDKLS DGR+ F +NH++DIFDSADRPLEG 
Sbjct: 637  VLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGS 696

Query: 663  RWWLNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAA 722
            RWWL AEDPFQ LA C++LTEALR+ SPETV+SHIPIHQDGSCNGLQHYAALGRD LGA 
Sbjct: 697  RWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAE 756

Query: 723  AVNLAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMT 782
            AVNL   EKPADVYSGIA RVL+I+R+DA RDPE FP+ALRA+ L++QVDRKLVKQTVMT
Sbjct: 757  AVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMT 816

Query: 783  SVYGVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLG 842
            SVYGVTYIGAR+QIKRRLKER+   D+ E+FG ACYAAK TL A+ EMF+AAR IM W G
Sbjct: 817  SVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFG 876

Query: 843  DCAKIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAF 902
            +CAKIIASEN+ VRWTTPLGLPVVQPY ++G  +VKTSLQ L+LQ ETD+V+V+RQRTAF
Sbjct: 877  ECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAF 936

Query: 903  PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPI 962
            PPNF+HSLDGSHMMMTAVACK+AG+ FAGVHDS+WTHACDVD++N ILREKFVELY  PI
Sbjct: 937  PPNFIHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPI 996

Query: 963  LENLLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 997
            LENLLE F+QSFP LDFPPLPERG+LDLK VL+SPYFFN
Sbjct: 997  LENLLESFEQSFPHLDFPPLPERGDLDLKVVLDSPYFFN 1011

BLAST of Cp4.1LG13g08100 vs. NCBI nr
Match: XP_023551171.1 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1988 bits (5151), Expect = 0.0
Identity = 996/996 (100.00%), Postives = 996/996 (100.00%), Query Frame = 0

Query: 1   MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60
           MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF
Sbjct: 1   MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60

Query: 61  GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSID 120
           GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSID
Sbjct: 61  GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSID 120

Query: 121 EEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 180
           EEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE
Sbjct: 121 EEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 180

Query: 181 LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 240
           LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM
Sbjct: 181 LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 240

Query: 241 SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 300
           SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND
Sbjct: 241 SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 300

Query: 301 KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQT 360
           KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQT
Sbjct: 301 KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQT 360

Query: 361 AYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHM 420
           AYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHM
Sbjct: 361 AYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHM 420

Query: 421 VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 480
           VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL
Sbjct: 421 VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 480

Query: 481 GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 540
           GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK
Sbjct: 481 GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 540

Query: 541 ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 600
           ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILE
Sbjct: 541 ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 600

Query: 601 FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWW 660
           FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWW
Sbjct: 601 FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWW 660

Query: 661 LNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 720
           LNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN
Sbjct: 661 LNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 720

Query: 721 LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 780
           LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY
Sbjct: 721 LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 780

Query: 781 GVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 840
           GVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA
Sbjct: 781 GVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 840

Query: 841 KIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPN 900
           KIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPN
Sbjct: 841 KIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPN 900

Query: 901 FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 960
           FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN
Sbjct: 901 FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 960

Query: 961 LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996
           LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN
Sbjct: 961 LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996

BLAST of Cp4.1LG13g08100 vs. NCBI nr
Match: XP_022939617.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1953 bits (5059), Expect = 0.0
Identity = 976/996 (97.99%), Postives = 986/996 (99.00%), Query Frame = 0

Query: 1    MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60
            MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESII EKLISDKFVLSSLPKF
Sbjct: 32   MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIIREKLISDKFVLSSLPKF 91

Query: 61   GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSID 120
            GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGS PKGYSSVAEAVSSTDVDEDSS D
Sbjct: 92   GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSIPKGYSSVAEAVSSTDVDEDSSSD 151

Query: 121  EEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 180
            EEIQELLQEMRKEEKRQVQRRRRRLK VKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE
Sbjct: 152  EEIQELLQEMRKEEKRQVQRRRRRLKWVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 211

Query: 181  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 240
            LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM
Sbjct: 212  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 271

Query: 241  SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 300
            SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND
Sbjct: 272  SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 331

Query: 301  KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQT 360
            KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKG DDSKPWGPDAKAKVGSRLIELLTQT
Sbjct: 332  KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGADDSKPWGPDAKAKVGSRLIELLTQT 391

Query: 361  AYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHM 420
            AYIQPP DQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVV GLE+TARHM
Sbjct: 392  AYIQPPADQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVKGLEKTARHM 451

Query: 421  VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 480
            VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL
Sbjct: 452  VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 511

Query: 481  GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 540
            GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK
Sbjct: 512  GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 571

Query: 541  ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 600
            EN+ERHSQRCDIELKLAVA KMKDEEGFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 572  ENVERHSQRCDIELKLAVAHKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 631

Query: 601  FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWW 660
            FAEGRPL KSGLRWLKIHLANLFAGGVDKLSHDGR+TFID+HVEDIFDSADRPLEGRRWW
Sbjct: 632  FAEGRPLGKSGLRWLKIHLANLFAGGVDKLSHDGRITFIDDHVEDIFDSADRPLEGRRWW 691

Query: 661  LNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 720
            LNAEDPFQFLAGCMNLTEALR+SSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN
Sbjct: 692  LNAEDPFQFLAGCMNLTEALRSSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 751

Query: 721  LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 780
            LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY
Sbjct: 752  LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 811

Query: 781  GVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 840
            GVTYIGAR+QIKRRLKERA ISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA
Sbjct: 812  GVTYIGARDQIKRRLKERAAISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 871

Query: 841  KIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPN 900
            KIIASENQPVRWTTPLGLPVVQPYRKLGKH+VKTSLQVLTLQQETDKVLVKRQRTAFPPN
Sbjct: 872  KIIASENQPVRWTTPLGLPVVQPYRKLGKHLVKTSLQVLTLQQETDKVLVKRQRTAFPPN 931

Query: 901  FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 960
            FVHSLDGSHMMMTAVACK+AGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN
Sbjct: 932  FVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 991

Query: 961  LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996
            LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN
Sbjct: 992  LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 1027

BLAST of Cp4.1LG13g08100 vs. NCBI nr
Match: KAG6578529.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1952 bits (5056), Expect = 0.0
Identity = 975/996 (97.89%), Postives = 985/996 (98.90%), Query Frame = 0

Query: 1   MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60
           MISTSMWKTIAKQAISK RQFHLDWHCLSRSHGVMGRLNESII EKLIS KFVLSSLPKF
Sbjct: 1   MISTSMWKTIAKQAISKTRQFHLDWHCLSRSHGVMGRLNESIIREKLISGKFVLSSLPKF 60

Query: 61  GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSID 120
           GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGS PKGYSSVAEAVSSTDVDEDSSID
Sbjct: 61  GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSIPKGYSSVAEAVSSTDVDEDSSID 120

Query: 121 EEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 180
           EEI+ELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE
Sbjct: 121 EEIEELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 180

Query: 181 LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 240
           LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM
Sbjct: 181 LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 240

Query: 241 SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 300
           SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND
Sbjct: 241 SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 300

Query: 301 KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQT 360
           KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKG DDSKPWGPDAKAKVGSRLIELLTQT
Sbjct: 301 KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGADDSKPWGPDAKAKVGSRLIELLTQT 360

Query: 361 AYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHM 420
           AYIQPP DQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVV GLERTARHM
Sbjct: 361 AYIQPPADQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVKGLERTARHM 420

Query: 421 VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 480
           VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL
Sbjct: 421 VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 480

Query: 481 GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 540
           GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK
Sbjct: 481 GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 540

Query: 541 ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 600
           EN+ERHSQRCDIELKLAVA KMKDEEGFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 541 ENVERHSQRCDIELKLAVAHKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 600

Query: 601 FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWW 660
           FAEGRPL KSGLRWLKIHLANLFAGGVDKLSHDGR+TFID+HVEDIFDSADRPLEGRRWW
Sbjct: 601 FAEGRPLGKSGLRWLKIHLANLFAGGVDKLSHDGRITFIDDHVEDIFDSADRPLEGRRWW 660

Query: 661 LNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 720
           LNAEDPFQFLAGCMNLTEALR+SSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN
Sbjct: 661 LNAEDPFQFLAGCMNLTEALRSSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 720

Query: 721 LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 780
           LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY
Sbjct: 721 LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 780

Query: 781 GVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 840
           GVTYIGAR+QIKRRLKERA ISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA
Sbjct: 781 GVTYIGARDQIKRRLKERAAISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 840

Query: 841 KIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPN 900
           KIIASENQPVRWTTPLGLPVVQPYRKLGKH+VKTSLQVLTLQQETDKVLVKRQRTAFPPN
Sbjct: 841 KIIASENQPVRWTTPLGLPVVQPYRKLGKHLVKTSLQVLTLQQETDKVLVKRQRTAFPPN 900

Query: 901 FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 960
           FVHSLDGSHMMMTA ACK+AGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN
Sbjct: 901 FVHSLDGSHMMMTAAACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 960

Query: 961 LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996
           LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN
Sbjct: 961 LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996

BLAST of Cp4.1LG13g08100 vs. NCBI nr
Match: XP_022993982.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1939 bits (5023), Expect = 0.0
Identity = 970/996 (97.39%), Postives = 981/996 (98.49%), Query Frame = 0

Query: 1    MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60
            MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESII EKLISDKFVLSSLPKF
Sbjct: 32   MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIIREKLISDKFVLSSLPKF 91

Query: 61   GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSID 120
            GISELGIGRSEVLSQ+DYGSRFCFGSMGVRIGLNGS PKGYSSVAEAVSSTDVDEDSSID
Sbjct: 92   GISELGIGRSEVLSQDDYGSRFCFGSMGVRIGLNGSCPKGYSSVAEAVSSTDVDEDSSID 151

Query: 121  EEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 180
            EEIQELLQEMRKEEKRQVQRRRR LKRVKGMGE+KYQMLKRRQVAIETEAWKQAVKEYKE
Sbjct: 152  EEIQELLQEMRKEEKRQVQRRRRGLKRVKGMGEEKYQMLKRRQVAIETEAWKQAVKEYKE 211

Query: 181  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 240
            LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNR AYAPYFDQLSADMM
Sbjct: 212  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRTAYAPYFDQLSADMM 271

Query: 241  SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 300
            SVVTMHKL+GLLMMGHEHGNARVVQAAC IGDAIEQEVRIHRFLEKMKKKKHDKDNENND
Sbjct: 272  SVVTMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 331

Query: 301  KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQT 360
            KPDSQLKEQE LRKKVTNLIK QKLPAVRHIVKG DDSKPWGPDAKAKVGSRLIELLTQT
Sbjct: 332  KPDSQLKEQERLRKKVTNLIKMQKLPAVRHIVKGADDSKPWGPDAKAKVGSRLIELLTQT 391

Query: 361  AYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHM 420
            AYIQPP DQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVV GLERTARHM
Sbjct: 392  AYIQPPADQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVKGLERTARHM 451

Query: 421  VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 480
            VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL
Sbjct: 452  VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 511

Query: 481  GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 540
            GNTKWRINKKILSIVDRIWTSGG LADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK
Sbjct: 512  GNTKWRINKKILSIVDRIWTSGGCLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 571

Query: 541  ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 600
            EN+ERHSQRCDIELKLAVARKMKDEEGFY+PHNIDFRGRAYPMHPYLNHLGSDLCRGILE
Sbjct: 572  ENVERHSQRCDIELKLAVARKMKDEEGFYFPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 631

Query: 601  FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWW 660
            FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGR+TFID+HVEDIFDSADRPLEGRRWW
Sbjct: 632  FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRITFIDDHVEDIFDSADRPLEGRRWW 691

Query: 661  LNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 720
            LNAEDPFQFLAGCMNLTEALR+SSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN
Sbjct: 692  LNAEDPFQFLAGCMNLTEALRSSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 751

Query: 721  LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 780
            L V EKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY
Sbjct: 752  LTVTEKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 811

Query: 781  GVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 840
            GVTYIGAR+QIKRRLKERA ISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA
Sbjct: 812  GVTYIGARDQIKRRLKERAAISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 871

Query: 841  KIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPN 900
            KIIASENQPVRWTTPLGLPVVQPYRKLG+H+VKTSLQVLTLQQETDKVLVKRQRTAFPPN
Sbjct: 872  KIIASENQPVRWTTPLGLPVVQPYRKLGRHLVKTSLQVLTLQQETDKVLVKRQRTAFPPN 931

Query: 901  FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 960
            FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN
Sbjct: 932  FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 991

Query: 961  LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996
            LLEGFQQSFP LDFPPLPERGELDLKEVLESPYFFN
Sbjct: 992  LLEGFQQSFPVLDFPPLPERGELDLKEVLESPYFFN 1027

BLAST of Cp4.1LG13g08100 vs. NCBI nr
Match: KAG7016089.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1912 bits (4953), Expect = 0.0
Identity = 955/977 (97.75%), Postives = 966/977 (98.87%), Query Frame = 0

Query: 6   MWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKFGISEL 65
           MWKTIAKQAISK RQFHLDWHCLSRSHGVMGRLNESII EKLIS KFVLSSLPKFGISEL
Sbjct: 1   MWKTIAKQAISKTRQFHLDWHCLSRSHGVMGRLNESIIREKLISGKFVLSSLPKFGISEL 60

Query: 66  GIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSIDEEIQE 125
           GIGRSEVLSQEDYGSRFCFGSMGVRIGLNGS PKGYSSVAEAVSSTDVDEDSSIDEEI+E
Sbjct: 61  GIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSIPKGYSSVAEAVSSTDVDEDSSIDEEIEE 120

Query: 126 LLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKELLMDM 185
           LLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKELLMDM
Sbjct: 121 LLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKELLMDM 180

Query: 186 CEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMMSVVTM 245
           CEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMMSVVTM
Sbjct: 181 CEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMMSVVTM 240

Query: 246 HKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQ 305
           HKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQ
Sbjct: 241 HKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQ 300

Query: 306 LKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQTAYIQP 365
           LKEQEWLRKKVTNLIKKQKLP VRHIVKG DDSKPWGPDAKAKVGSRLIELLTQTAYIQP
Sbjct: 301 LKEQEWLRKKVTNLIKKQKLPTVRHIVKGGDDSKPWGPDAKAKVGSRLIELLTQTAYIQP 360

Query: 366 PVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHMVIPYM 425
           P DQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVV GLERTARHMVIPYM
Sbjct: 361 PADQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVKGLERTARHMVIPYM 420

Query: 426 PMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKW 485
           PMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKW
Sbjct: 421 PMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKW 480

Query: 486 RINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENMER 545
           RINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKKEN+ER
Sbjct: 481 RINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENVER 540

Query: 546 HSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR 605
           HSQRCDIELKLAVA KMKDEEGFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGILEFAEGR
Sbjct: 541 HSQRCDIELKLAVAHKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGR 600

Query: 606 PLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWWLNAED 665
           PL KSGLRWLKIHLANLFAGGVDKLSHDGR+TFID+HVEDIFDSADRPLEGRRWWLNAED
Sbjct: 601 PLGKSGLRWLKIHLANLFAGGVDKLSHDGRITFIDDHVEDIFDSADRPLEGRRWWLNAED 660

Query: 666 PFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLAVRE 725
           PFQFLAGCMNLTEALR+SSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLAVRE
Sbjct: 661 PFQFLAGCMNLTEALRSSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLAVRE 720

Query: 726 KPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYI 785
           KPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYI
Sbjct: 721 KPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYI 780

Query: 786 GAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIAS 845
           GAR+QIKRRLKERA ISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIAS
Sbjct: 781 GARDQIKRRLKERAAISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIAS 840

Query: 846 ENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSL 905
           ENQPVRWTTPLGLPVVQPYRKLGKH+VKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSL
Sbjct: 841 ENQPVRWTTPLGLPVVQPYRKLGKHLVKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSL 900

Query: 906 DGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGF 965
           DGSHMMMTAVACK+AGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGF
Sbjct: 901 DGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGF 960

Query: 966 QQSFPALDFPPLPERGE 982
           QQSFPALDFPPLPERG+
Sbjct: 961 QQSFPALDFPPLPERGD 977

BLAST of Cp4.1LG13g08100 vs. ExPASy TrEMBL
Match: A0A6J1FHA8 (DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111445458 PE=3 SV=1)

HSP 1 Score: 1953 bits (5059), Expect = 0.0
Identity = 976/996 (97.99%), Postives = 986/996 (99.00%), Query Frame = 0

Query: 1    MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60
            MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESII EKLISDKFVLSSLPKF
Sbjct: 32   MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIIREKLISDKFVLSSLPKF 91

Query: 61   GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSID 120
            GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGS PKGYSSVAEAVSSTDVDEDSS D
Sbjct: 92   GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSIPKGYSSVAEAVSSTDVDEDSSSD 151

Query: 121  EEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 180
            EEIQELLQEMRKEEKRQVQRRRRRLK VKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE
Sbjct: 152  EEIQELLQEMRKEEKRQVQRRRRRLKWVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 211

Query: 181  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 240
            LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM
Sbjct: 212  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 271

Query: 241  SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 300
            SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND
Sbjct: 272  SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 331

Query: 301  KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQT 360
            KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKG DDSKPWGPDAKAKVGSRLIELLTQT
Sbjct: 332  KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGADDSKPWGPDAKAKVGSRLIELLTQT 391

Query: 361  AYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHM 420
            AYIQPP DQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVV GLE+TARHM
Sbjct: 392  AYIQPPADQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVKGLEKTARHM 451

Query: 421  VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 480
            VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL
Sbjct: 452  VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 511

Query: 481  GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 540
            GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK
Sbjct: 512  GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 571

Query: 541  ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 600
            EN+ERHSQRCDIELKLAVA KMKDEEGFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 572  ENVERHSQRCDIELKLAVAHKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 631

Query: 601  FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWW 660
            FAEGRPL KSGLRWLKIHLANLFAGGVDKLSHDGR+TFID+HVEDIFDSADRPLEGRRWW
Sbjct: 632  FAEGRPLGKSGLRWLKIHLANLFAGGVDKLSHDGRITFIDDHVEDIFDSADRPLEGRRWW 691

Query: 661  LNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 720
            LNAEDPFQFLAGCMNLTEALR+SSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN
Sbjct: 692  LNAEDPFQFLAGCMNLTEALRSSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 751

Query: 721  LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 780
            LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY
Sbjct: 752  LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 811

Query: 781  GVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 840
            GVTYIGAR+QIKRRLKERA ISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA
Sbjct: 812  GVTYIGARDQIKRRLKERAAISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 871

Query: 841  KIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPN 900
            KIIASENQPVRWTTPLGLPVVQPYRKLGKH+VKTSLQVLTLQQETDKVLVKRQRTAFPPN
Sbjct: 872  KIIASENQPVRWTTPLGLPVVQPYRKLGKHLVKTSLQVLTLQQETDKVLVKRQRTAFPPN 931

Query: 901  FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 960
            FVHSLDGSHMMMTAVACK+AGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN
Sbjct: 932  FVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 991

Query: 961  LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996
            LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN
Sbjct: 992  LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 1027

BLAST of Cp4.1LG13g08100 vs. ExPASy TrEMBL
Match: A0A6J1JUF5 (DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111489816 PE=3 SV=1)

HSP 1 Score: 1939 bits (5023), Expect = 0.0
Identity = 970/996 (97.39%), Postives = 981/996 (98.49%), Query Frame = 0

Query: 1    MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60
            MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESII EKLISDKFVLSSLPKF
Sbjct: 32   MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIIREKLISDKFVLSSLPKF 91

Query: 61   GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSID 120
            GISELGIGRSEVLSQ+DYGSRFCFGSMGVRIGLNGS PKGYSSVAEAVSSTDVDEDSSID
Sbjct: 92   GISELGIGRSEVLSQDDYGSRFCFGSMGVRIGLNGSCPKGYSSVAEAVSSTDVDEDSSID 151

Query: 121  EEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 180
            EEIQELLQEMRKEEKRQVQRRRR LKRVKGMGE+KYQMLKRRQVAIETEAWKQAVKEYKE
Sbjct: 152  EEIQELLQEMRKEEKRQVQRRRRGLKRVKGMGEEKYQMLKRRQVAIETEAWKQAVKEYKE 211

Query: 181  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 240
            LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNR AYAPYFDQLSADMM
Sbjct: 212  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRTAYAPYFDQLSADMM 271

Query: 241  SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 300
            SVVTMHKL+GLLMMGHEHGNARVVQAAC IGDAIEQEVRIHRFLEKMKKKKHDKDNENND
Sbjct: 272  SVVTMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 331

Query: 301  KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQT 360
            KPDSQLKEQE LRKKVTNLIK QKLPAVRHIVKG DDSKPWGPDAKAKVGSRLIELLTQT
Sbjct: 332  KPDSQLKEQERLRKKVTNLIKMQKLPAVRHIVKGADDSKPWGPDAKAKVGSRLIELLTQT 391

Query: 361  AYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHM 420
            AYIQPP DQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVV GLERTARHM
Sbjct: 392  AYIQPPADQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVKGLERTARHM 451

Query: 421  VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 480
            VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL
Sbjct: 452  VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 511

Query: 481  GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 540
            GNTKWRINKKILSIVDRIWTSGG LADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK
Sbjct: 512  GNTKWRINKKILSIVDRIWTSGGCLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 571

Query: 541  ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 600
            EN+ERHSQRCDIELKLAVARKMKDEEGFY+PHNIDFRGRAYPMHPYLNHLGSDLCRGILE
Sbjct: 572  ENVERHSQRCDIELKLAVARKMKDEEGFYFPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 631

Query: 601  FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWW 660
            FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGR+TFID+HVEDIFDSADRPLEGRRWW
Sbjct: 632  FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRITFIDDHVEDIFDSADRPLEGRRWW 691

Query: 661  LNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 720
            LNAEDPFQFLAGCMNLTEALR+SSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN
Sbjct: 692  LNAEDPFQFLAGCMNLTEALRSSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 751

Query: 721  LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 780
            L V EKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY
Sbjct: 752  LTVTEKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 811

Query: 781  GVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 840
            GVTYIGAR+QIKRRLKERA ISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA
Sbjct: 812  GVTYIGARDQIKRRLKERAAISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 871

Query: 841  KIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPN 900
            KIIASENQPVRWTTPLGLPVVQPYRKLG+H+VKTSLQVLTLQQETDKVLVKRQRTAFPPN
Sbjct: 872  KIIASENQPVRWTTPLGLPVVQPYRKLGRHLVKTSLQVLTLQQETDKVLVKRQRTAFPPN 931

Query: 901  FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 960
            FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN
Sbjct: 932  FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 991

Query: 961  LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996
            LLEGFQQSFP LDFPPLPERGELDLKEVLESPYFFN
Sbjct: 992  LLEGFQQSFPVLDFPPLPERGELDLKEVLESPYFFN 1027

BLAST of Cp4.1LG13g08100 vs. ExPASy TrEMBL
Match: A0A6J1C0Y4 (DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111006419 PE=3 SV=1)

HSP 1 Score: 1761 bits (4562), Expect = 0.0
Identity = 874/996 (87.75%), Postives = 922/996 (92.57%), Query Frame = 0

Query: 1    MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60
            MISTS+WK IAKQAIS+NR+F LDWH  SRSHGV+GR +ES+  EK +S   V SSLPKF
Sbjct: 34   MISTSVWKIIAKQAISRNRKFRLDWHSFSRSHGVLGRPHESLFPEKFMSGSSVFSSLPKF 93

Query: 61   GISELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSID 120
            G  E+ IGR+E+LSQE YGSRFCFGS+G RIGLNG  PKG+SSVAEAVSSTDVDED+S+D
Sbjct: 94   GTWEMDIGRNEILSQEVYGSRFCFGSVGTRIGLNGMCPKGFSSVAEAVSSTDVDEDASVD 153

Query: 121  EEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYKE 180
            +EIQELLQEM KEEKRQV+ RRRR K  KGMG+ KYQMLKRRQV IETEAW+ AVKEYKE
Sbjct: 154  DEIQELLQEMTKEEKRQVEYRRRRQKMAKGMGQGKYQMLKRRQVKIETEAWELAVKEYKE 213

Query: 181  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADMM 240
            LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAI KEQELIR GKNR AYAPYFD+L ADMM
Sbjct: 214  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIIKEQELIREGKNRTAYAPYFDRLPADMM 273

Query: 241  SVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENND 300
            SV+TMHKL+GLLMMGHEHGNARVVQAAC IGDAIEQE+RIH FLEKMKKKKHDKD ENND
Sbjct: 274  SVITMHKLMGLLMMGHEHGNARVVQAACVIGDAIEQEIRIHNFLEKMKKKKHDKDGENND 333

Query: 301  KPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQT 360
            KPDS +KEQE LRKKVTNLIKKQKLPAVR IVKG DDSKPWG DAKAKVGSRLIELLTQT
Sbjct: 334  KPDSLIKEQEKLRKKVTNLIKKQKLPAVRQIVKGADDSKPWGQDAKAKVGSRLIELLTQT 393

Query: 361  AYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHM 420
            AYIQPP DQLADGPPDIRPAFRHSFR VMKEANKNSSRRYGVIECDPLVV GLERTARHM
Sbjct: 394  AYIQPPADQLADGPPDIRPAFRHSFRTVMKEANKNSSRRYGVIECDPLVVKGLERTARHM 453

Query: 421  VIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTL 480
            VIPYMPMLVPPVNWTGYDKGGHIFLPSF+MRT GA QQR+AVKRTPKQQLTPVFEALDTL
Sbjct: 454  VIPYMPMLVPPVNWTGYDKGGHIFLPSFVMRTHGAKQQRDAVKRTPKQQLTPVFEALDTL 513

Query: 481  GNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 540
            GNTKWRINK+ILS+VDRIWT GGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK
Sbjct: 514  GNTKWRINKRILSVVDRIWTGGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKK 573

Query: 541  ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILE 600
            ENMERHSQRCDIELKLAVARKMKDEEGFYYPHN+DFRGRAYPMHPYLNHLGSDLCRGILE
Sbjct: 574  ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 633

Query: 601  FAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWW 660
            FAEGRPLRKSGL WLKIHLANLFAGGVDKLSHDGRMTFI+NH+EDIFDSADRPLEGRRWW
Sbjct: 634  FAEGRPLRKSGLNWLKIHLANLFAGGVDKLSHDGRMTFIENHLEDIFDSADRPLEGRRWW 693

Query: 661  LNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 720
            LNAEDPFQFLA CMNLTEALR+ SPET ISHIP+HQDGSCNGLQHYAALGRDKLGA AVN
Sbjct: 694  LNAEDPFQFLAACMNLTEALRSFSPETFISHIPVHQDGSCNGLQHYAALGRDKLGATAVN 753

Query: 721  LAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVY 780
            L   EKPADVY+GIAARVLEI+++DAQRDP  FPDALRAK LIDQVDRKLVKQTVMTSVY
Sbjct: 754  LVTGEKPADVYTGIAARVLEIMQRDAQRDPAIFPDALRAKRLIDQVDRKLVKQTVMTSVY 813

Query: 781  GVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCA 840
            GVTYIGAR+QIKRRLKERA IS    +      + + TLTALGEMFEAARGIM+WLGDCA
Sbjct: 814  GVTYIGARDQIKRRLKERASISXXXXVMSSNIMSEQITLTALGEMFEAARGIMNWLGDCA 873

Query: 841  KIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPN 900
            KIIASENQPVRWTTPLGLPVVQPYR LG+H++KTSLQVLTLQ+ETDKVL KRQRTAFPPN
Sbjct: 874  KIIASENQPVRWTTPLGLPVVQPYRVLGRHLIKTSLQVLTLQRETDKVLAKRQRTAFPPN 933

Query: 901  FVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILEN 960
            FVHSLDGSHMMMTAVACKKAGL+FAGVHDSYWTHACDVDEMNRILREKFVELYE PILEN
Sbjct: 934  FVHSLDGSHMMMTAVACKKAGLSFAGVHDSYWTHACDVDEMNRILREKFVELYEMPILEN 993

Query: 961  LLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996
            LLEGFQ+SFP L+FPPLPERGE DLKEVLESPYFFN
Sbjct: 994  LLEGFQRSFPTLNFPPLPERGEFDLKEVLESPYFFN 1029

BLAST of Cp4.1LG13g08100 vs. ExPASy TrEMBL
Match: A0A0A0KXM5 (DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G642180 PE=3 SV=1)

HSP 1 Score: 1613 bits (4176), Expect = 0.0
Identity = 806/998 (80.76%), Postives = 884/998 (88.58%), Query Frame = 0

Query: 1   MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60
           MISTSMWKTIAK+ I +NRQFH DW  LSR +GV+GR NES+  +KLIS  FV SSLPKF
Sbjct: 1   MISTSMWKTIAKRGICRNRQFHPDWRWLSRFNGVLGRPNESLFRDKLISGNFVPSSLPKF 60

Query: 61  GISELGIGRSEVLSQEDY-GSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSI 120
           G  E+G+GRSE+LSQEDY  SRFCFGSMG RIGLNG  PKGYSSVAEAVSSTDVDED+S+
Sbjct: 61  GSFEMGVGRSEILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASV 120

Query: 121 DEEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYK 180
           D ++QE +QEM KEEKR        LK VKGMG+ KY ML+RRQV IE EAW+ A KEY+
Sbjct: 121 DGKVQESVQEMSKEEKR--------LKPVKGMGQWKYNMLRRRQVTIEAEAWENAAKEYR 180

Query: 181 ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGK-NRAAYAPYFDQLSAD 240
           ELL+DMC+QKLAPNLPY+KSLFLGWFEP +DAI KEQELI+ GK +RA YAPYF QL AD
Sbjct: 181 ELLVDMCKQKLAPNLPYVKSLFLGWFEPFQDAIIKEQELIQEGKRSRAPYAPYFLQLPAD 240

Query: 241 MMSVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNEN 300
            MSV+TMHKL+GLLM G EHG+ RVVQAACAIGDAIEQEVRIH+FLEK K++ H+KDNEN
Sbjct: 241 KMSVITMHKLMGLLMRGSEHGSVRVVQAACAIGDAIEQEVRIHKFLEKKKERTHNKDNEN 300

Query: 301 NDKPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLT 360
           ND+PD + KEQE LRKKVTNLIKK+K  A   I K  DDS+PWG + KAKVG+RLIELL 
Sbjct: 301 NDQPDIERKEQERLRKKVTNLIKKKKHLAAGQIAKRADDSRPWGRELKAKVGARLIELLI 360

Query: 361 QTAYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTAR 420
           QTAYIQPP DQLADGPPD RPAF HS +  +K+   N   R GVIECDPLVV GL+ TAR
Sbjct: 361 QTAYIQPPADQLADGPPDPRPAFVHSLKTSVKDGT-NFMGRLGVIECDPLVVKGLDWTAR 420

Query: 421 HMVIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALD 480
            +VIPYMPML+PPV W GYDKGGHI LPSF MRT GA QQR+A KRTPKQQLTPVFEALD
Sbjct: 421 QIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKQQLTPVFEALD 480

Query: 481 TLGNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSV 540
           TLGNTKWRINK+IL++V+RIWTSGG LA LVD+DDVPLPEKPD+EDETL++KWKW+V+SV
Sbjct: 481 TLGNTKWRINKRILNVVERIWTSGGHLAGLVDQDDVPLPEKPDTEDETLIKKWKWEVRSV 540

Query: 541 KKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGI 600
           KKENMERHSQRCDIELKL VARKMKDEEGFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGI
Sbjct: 541 KKENMERHSQRCDIELKLTVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGI 600

Query: 601 LEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRR 660
           LEFAEGR LRKSGL WLKIHLANLFAGGVDKLSHDGRMTFI+NH+EDIFDSADRPLEG R
Sbjct: 601 LEFAEGRSLRKSGLIWLKIHLANLFAGGVDKLSHDGRMTFIENHLEDIFDSADRPLEGGR 660

Query: 661 WWLNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAA 720
           WW+NAEDPFQFLAGCMNLTEALR+SSPET ISHIPIHQDGSCNGLQHYAALGRDK GAAA
Sbjct: 661 WWMNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKSGAAA 720

Query: 721 VNLAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTS 780
           VNL   EKPADVYSGIAARVLEI+++DAQ+DPETFPDAL AK LIDQVDRKLVKQTVMTS
Sbjct: 721 VNLVAGEKPADVYSGIAARVLEILKRDAQKDPETFPDALHAKILIDQVDRKLVKQTVMTS 780

Query: 781 VYGVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGD 840
           VYGVTYIGAR+QIKRRLKERA ISDD+ELFGC+CYAAK TL ALGEMF AAR IM+WL D
Sbjct: 781 VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKITLEALGEMFVAAREIMNWLSD 840

Query: 841 CAKIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFP 900
           CAKIIAS+N+ VRWTTPLGLPVVQPYRKLG H +KTSLQVLTL++ETDK+L  RQRTAFP
Sbjct: 841 CAKIIASKNETVRWTTPLGLPVVQPYRKLGIHAIKTSLQVLTLRRETDKILSSRQRTAFP 900

Query: 901 PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL 960
           PNFVHSLD SHMMMTAVACK+AGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL
Sbjct: 901 PNFVHSLDSSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL 960

Query: 961 ENLLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996
           ENLLE F+QSFPALDFPPLPERGE +LKEVL+SPYFFN
Sbjct: 961 ENLLESFEQSFPALDFPPLPERGEFNLKEVLDSPYFFN 989

BLAST of Cp4.1LG13g08100 vs. ExPASy TrEMBL
Match: A0A1S3CBC4 (DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103498556 PE=3 SV=1)

HSP 1 Score: 1608 bits (4165), Expect = 0.0
Identity = 798/998 (79.96%), Postives = 885/998 (88.68%), Query Frame = 0

Query: 1   MISTSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKF 60
           MISTSMWKTIAK+ I +NRQFH DW C SR +GV+GR NES+  +KLIS   V SSLPKF
Sbjct: 1   MISTSMWKTIAKRGICRNRQFHPDWRCFSRFNGVLGRPNESLFRDKLISGNLVPSSLPKF 60

Query: 61  GISELGIGRSEVLSQEDY-GSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSI 120
           G  ++G+GR+++LSQEDY  SRFCFGSMG RIGLNG  PKGYSSVAEAVSSTDVDED+S+
Sbjct: 61  GFFQMGVGRNQILSQEDYYRSRFCFGSMGARIGLNGLCPKGYSSVAEAVSSTDVDEDASL 120

Query: 121 DEEIQELLQEMRKEEKRQVQRRRRRLKRVKGMGEQKYQMLKRRQVAIETEAWKQAVKEYK 180
           D E+QELLQEM KEE R        LK VKGM   KY ML+RRQV +E EAW++AVKEYK
Sbjct: 121 DGEVQELLQEMSKEETR--------LKTVKGMPHSKYLMLRRRQVTVEAEAWEKAVKEYK 180

Query: 181 ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKN-RAAYAPYFDQLSAD 240
           ELL DMC+QKLAPNLPY+KSLFLGWFEP ++AI+KEQELI+ GK  RA YAPYF QL AD
Sbjct: 181 ELLEDMCKQKLAPNLPYVKSLFLGWFEPFQEAINKEQELIQKGKKPRAPYAPYFVQLPAD 240

Query: 241 MMSVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNEN 300
            MSV+TMHKL+G+LM G EHGN +VV AACAIGDAIEQEVRIH+FLEK K+KKH+K+NEN
Sbjct: 241 KMSVITMHKLMGMLMKGCEHGNIKVVVAACAIGDAIEQEVRIHKFLEKKKEKKHNKNNEN 300

Query: 301 NDKPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLT 360
           N +PDSQ+KEQE LRK V NLIKK+K  AV  I KGTDDS+PWG +AKAKVG+RLIELL 
Sbjct: 301 NYQPDSQVKEQERLRKTVANLIKKKKHQAVGQIAKGTDDSRPWGREAKAKVGARLIELLI 360

Query: 361 QTAYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTAR 420
           QTAYIQPP DQLADGPPDIRPAF HS + V+ +   NS  R GVIECDPLV+ GL+RTAR
Sbjct: 361 QTAYIQPPADQLADGPPDIRPAFWHSLKTVVTD---NSVGRLGVIECDPLVIKGLDRTAR 420

Query: 421 HMVIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEALD 480
            +VIPYMPML+PPV W GYDKGGHI LPSF MRT GA QQR+A KRTPK+QLTPVF+ALD
Sbjct: 421 QIVIPYMPMLMPPVKWRGYDKGGHILLPSFAMRTHGAKQQRDAFKRTPKEQLTPVFQALD 480

Query: 481 TLGNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSV 540
           TLGNTKWRINK+IL +V+RIW+SGG LA LV+RDDVPLPEKPD+EDETL++KWKW+++SV
Sbjct: 481 TLGNTKWRINKRILGVVERIWSSGGDLAGLVNRDDVPLPEKPDTEDETLIKKWKWEIRSV 540

Query: 541 KKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGI 600
           KKENMERHSQRCDIELKLAVAR MKDEEGFYYPHN+DFRGRAYPMHP+LNHLGSDLCRGI
Sbjct: 541 KKENMERHSQRCDIELKLAVARNMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDLCRGI 600

Query: 601 LEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRR 660
           LEFAEGRPLRKSGL WLKIHLANLFAGGVDKLSHDGRMTF++NH+EDIFDSAD+PL GRR
Sbjct: 601 LEFAEGRPLRKSGLSWLKIHLANLFAGGVDKLSHDGRMTFVENHLEDIFDSADKPLGGRR 660

Query: 661 WWLNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAAA 720
           WWLNAEDPFQFLAGCMNLTEALR+SSPET ISHIPIHQDGSCNGLQHYAALGRDKLGAA+
Sbjct: 661 WWLNAEDPFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKLGAAS 720

Query: 721 VNLAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTS 780
           VNL   EKPADVYSGIAARV EI+R+DAQ+DPETFPDA+ AK LIDQVDRKLVKQTVMTS
Sbjct: 721 VNLVAGEKPADVYSGIAARVQEILRRDAQKDPETFPDAMYAKKLIDQVDRKLVKQTVMTS 780

Query: 781 VYGVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLGD 840
           VYGVTYIGAR+QIKRRLKERA ISDD+ELFGC+CYAAK TL ALGEMF AAR IM+WL D
Sbjct: 781 VYGVTYIGARDQIKRRLKERAAISDDSELFGCSCYAAKMTLEALGEMFVAAREIMNWLSD 840

Query: 841 CAKIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFP 900
           CAKIIAS+N+ VRWTTPLGLPVVQPYRKLG   +KTSLQVLTL++ETDK+L  RQRTAFP
Sbjct: 841 CAKIIASKNESVRWTTPLGLPVVQPYRKLGALSIKTSLQVLTLRRETDKILTSRQRTAFP 900

Query: 901 PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPIL 960
           PNFVHSLD SHMMMTA+AC +AGL FAGVHDSYWTHACDVDEMNRILR+KFVELYETPIL
Sbjct: 901 PNFVHSLDSSHMMMTAIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETPIL 960

Query: 961 ENLLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 996
           E+LLE FQQSFPALDFPPLPERGE DLKEVL+SPYFFN
Sbjct: 961 EDLLESFQQSFPALDFPPLPERGEFDLKEVLDSPYFFN 987

BLAST of Cp4.1LG13g08100 vs. TAIR 10
Match: AT5G15700.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1318.1 bits (3410), Expect = 0.0e+00
Identity = 670/999 (67.07%), Postives = 801/999 (80.18%), Query Frame = 0

Query: 3    STSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKFGI 62
            S  MW+ IAKQAIS++       +  S++ G++    ESI S+ L S +F +   P  G 
Sbjct: 37   SFPMWRNIAKQAISRSA---ARLNVSSQTRGLLVSSPESIFSKNL-SFRFPVLGSPCHGK 96

Query: 63   S---ELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVA-EAVSSTDVDEDSS 122
                  GI R E  S+    S  C         L+G+  +GY+SVA E V STDV+E+  
Sbjct: 97   GFRCLSGITRREEFSK----SERC---------LSGTLARGYTSVAEEEVLSTDVEEEPE 156

Query: 123  IDEEIQELLQEMRKEEKRQVQRRRRRLKRVK-GMGEQKYQMLKRRQVAIETEAWKQAVKE 182
            +D    ELL+EM+KE+KR+  R  R  K+ + GMG  K+Q L RRQV IETE W++A  E
Sbjct: 157  VD----ELLKEMKKEKKRESHRSWRMKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAE 216

Query: 183  YKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSA 242
            Y ELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAI+K+QEL R+GK++A YA Y DQL A
Sbjct: 217  YMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPA 276

Query: 243  DMMSVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNE 302
            D +SV+TMHKL+G LM G ++G  +VV AAC +GDAIEQE+RI  FL+K KKK  D +  
Sbjct: 277  DKISVITMHKLMGHLMTGGDNGCVKVVHAACTVGDAIEQEIRICTFLDK-KKKGDDNEES 336

Query: 303  NNDKPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELL 362
               + ++ +KEQ+ LRKKV  LIKKQKL AVR I++  D +KPW  D +AKVGSRLIELL
Sbjct: 337  GGVENETSMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELL 396

Query: 363  TQTAYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTA 422
             +TAYIQ P DQ  +  PD+RPAF H+F++   + + NS R+YGVIECDPLV  GLE++ 
Sbjct: 397  VRTAYIQSPADQQDNDLPDVRPAFVHTFKVA--KGSMNSGRKYGVIECDPLVRKGLEKSG 456

Query: 423  RHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEAL 482
            R+ V+PYMPMLVPP+ W+GYDKG ++FL S+IM+T GA QQREA+K  PK QL PVFEAL
Sbjct: 457  RYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEAL 516

Query: 483  DTLGNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKS 542
            DTLG+TKWR+NK++L++VDRIW+SGG +AD+VDR DVPLPEKPD+EDE +L+KWKW+VKS
Sbjct: 517  DTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKS 576

Query: 543  VKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRG 602
             KK N ERHSQRCD ELKL+VARKMKDEE FYYPHN+DFRGRAYPM P+LNHLGSDLCRG
Sbjct: 577  AKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRG 636

Query: 603  ILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGR 662
            +LEFAEGRP+  SGLRWLKIHLANL+AGGVDKLS DGR+ F +NH++DIFDSADRPLEG 
Sbjct: 637  VLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGS 696

Query: 663  RWWLNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAA 722
            RWWL AEDPFQ LA C++LTEALR+ SPETV+SHIPIHQDGSCNGLQHYAALGRD LGA 
Sbjct: 697  RWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAE 756

Query: 723  AVNLAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMT 782
            AVNL   EKPADVYSGIA RVL+I+R+DA RDPE FP+ALRA+ L++QVDRKLVKQTVMT
Sbjct: 757  AVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMT 816

Query: 783  SVYGVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLG 842
            SVYGVTYIGAR+QIKRRLKER+   D+ E+FG ACYAAK TL A+ EMF+AAR IM W G
Sbjct: 817  SVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFG 876

Query: 843  DCAKIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAF 902
            +CAKIIASEN+ VRWTTPLGLPVVQPY ++G  +VKTSLQ L+LQ ETD+V+V+RQRTAF
Sbjct: 877  ECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAF 936

Query: 903  PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPI 962
            PPNF+HSLDGSHMMMTAVACK+AG+ FAGVHDS+WTHACDVD++N ILREKFVELY  PI
Sbjct: 937  PPNFIHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPI 996

Query: 963  LENLLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 997
            LENLLE F+QSFP LDFPPLPERG+LDLK VL+SPYFFN
Sbjct: 997  LENLLESFEQSFPHLDFPPLPERGDLDLKVVLDSPYFFN 1011

BLAST of Cp4.1LG13g08100 vs. TAIR 10
Match: AT5G15700.2 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1300.8 bits (3365), Expect = 0.0e+00
Identity = 662/989 (66.94%), Postives = 792/989 (80.08%), Query Frame = 0

Query: 3    STSMWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKFGI 62
            S  MW+ IAKQAIS++       +  S++ G++    ESI S+ L S +F +   P  G 
Sbjct: 37   SFPMWRNIAKQAISRSA---ARLNVSSQTRGLLVSSPESIFSKNL-SFRFPVLGSPCHGK 96

Query: 63   S---ELGIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVA-EAVSSTDVDEDSS 122
                  GI R E  S+    S  C         L+G+  +GY+SVA E V STDV+E+  
Sbjct: 97   GFRCLSGITRREEFSK----SERC---------LSGTLARGYTSVAEEEVLSTDVEEEPE 156

Query: 123  IDEEIQELLQEMRKEEKRQVQRRRRRLKRVK-GMGEQKYQMLKRRQVAIETEAWKQAVKE 182
            +D    ELL+EM+KE+KR+  R  R  K+ + GMG  K+Q L RRQV IETE W++A  E
Sbjct: 157  VD----ELLKEMKKEKKRESHRSWRMKKQDQFGMGRTKFQNLWRRQVKIETEEWERAAAE 216

Query: 183  YKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSA 242
            Y ELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAI+K+QEL R+GK++A YA Y DQL A
Sbjct: 217  YMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPA 276

Query: 243  DMMSVVTMHKLIGLLMMGHEHGNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNE 302
            D +SV+TMHKL+G LM G ++G  +VV AAC +GDAIEQE+RI  FL+K KKK  D +  
Sbjct: 277  DKISVITMHKLMGHLMTGGDNGCVKVVHAACTVGDAIEQEIRICTFLDK-KKKGDDNEES 336

Query: 303  NNDKPDSQLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELL 362
               + ++ +KEQ+ LRKKV  LIKKQKL AVR I++  D +KPW  D +AKVGSRLIELL
Sbjct: 337  GGVENETSMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELL 396

Query: 363  TQTAYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGLERTA 422
             +TAYIQ P DQ  +  PD+RPAF H+F++   + + NS R+YGVIECDPLV  GLE++ 
Sbjct: 397  VRTAYIQSPADQQDNDLPDVRPAFVHTFKVA--KGSMNSGRKYGVIECDPLVRKGLEKSG 456

Query: 423  RHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPVFEAL 482
            R+ V+PYMPMLVPP+ W+GYDKG ++FL S+IM+T GA QQREA+K  PK QL PVFEAL
Sbjct: 457  RYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEAL 516

Query: 483  DTLGNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKWKVKS 542
            DTLG+TKWR+NK++L++VDRIW+SGG +AD+VDR DVPLPEKPD+EDE +L+KWKW+VKS
Sbjct: 517  DTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKS 576

Query: 543  VKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRG 602
             KK N ERHSQRCD ELKL+VARKMKDEE FYYPHN+DFRGRAYPM P+LNHLGSDLCRG
Sbjct: 577  AKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRG 636

Query: 603  ILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGR 662
            +LEFAEGRP+  SGLRWLKIHLANL+AGGVDKLS DGR+ F +NH++DIFDSADRPLEG 
Sbjct: 637  VLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGS 696

Query: 663  RWWLNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDKLGAA 722
            RWWL AEDPFQ LA C++LTEALR+ SPETV+SHIPIHQDGSCNGLQHYAALGRD LGA 
Sbjct: 697  RWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAE 756

Query: 723  AVNLAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQTVMT 782
            AVNL   EKPADVYSGIA RVL+I+R+DA RDPE FP+ALRA+ L++QVDRKLVKQTVMT
Sbjct: 757  AVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMT 816

Query: 783  SVYGVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIMSWLG 842
            SVYGVTYIGAR+QIKRRLKER+   D+ E+FG ACYAAK TL A+ EMF+AAR IM W G
Sbjct: 817  SVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFG 876

Query: 843  DCAKIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAF 902
            +CAKIIASEN+ VRWTTPLGLPVVQPY ++G  +VKTSLQ L+LQ ETD+V+V+RQRTAF
Sbjct: 877  ECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAF 936

Query: 903  PPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPI 962
            PPNF+HSLDGSHMMMTAVACK+AG+ FAGVHDS+WTHACDVD++N ILREKFVELY  PI
Sbjct: 937  PPNFIHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPI 996

Query: 963  LENLLEGFQQSFPALDFPPLPERGELDLK 987
            LENLLE F+QSFP LDFPPLPERG+LDLK
Sbjct: 997  LENLLESFEQSFPHLDFPPLPERGDLDLK 1001

BLAST of Cp4.1LG13g08100 vs. TAIR 10
Match: AT1G68990.1 (male gametophyte defective 3 )

HSP 1 Score: 1250.3 bits (3234), Expect = 0.0e+00
Identity = 632/1003 (63.01%), Postives = 776/1003 (77.37%), Query Frame = 0

Query: 6   MWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKFGISEL 65
           MW+ I  +A  +  +F  D    S +H  + R+   + S  L   +  LS  P   ++E+
Sbjct: 1   MWRNILGRASLRKVKFLSD-SSSSGTHYPVNRVRGILSSVNLSGVRNGLSINP---VNEM 60

Query: 66  GIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSIDEEIQE 125
           G      LS   +G  + F              +GY++ A+A+ STD +++SS  +E+ E
Sbjct: 61  G-----GLSSFRHGQCYVF--------------EGYATAAQAIDSTDPEDESSGSDEVNE 120

Query: 126 LLQEMRKEEKRQVQRRRRRL-----KRV-KGMGEQKYQMLKRRQVAIETEAWKQAVKEYK 185
           L+ EM KE +R   R++ RL     KRV  GMG QK+ MLK+RQV +ETE W++A +E +
Sbjct: 121 LITEMEKETER--IRKKARLAAIPPKRVIAGMGAQKFYMLKQRQVKMETEEWERAARECR 180

Query: 186 ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADM 245
           E+L DMCEQKLAPNLPYMKSLFLGWFEP+R+AI  + +  +I K +  YAP+ +QL AD 
Sbjct: 181 EILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADK 240

Query: 246 MSVVTMHKLIGLLMMGHEH-GNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNEN 305
           M+V+TMHK++GLLM   E  G  ++V AA  IG+A+EQEVRI+ FL+K K KK+  D   
Sbjct: 241 MAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGEAVEQEVRINSFLQK-KNKKNATDKTI 300

Query: 306 NDKPDS-----QLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRL 365
           N + ++       KE E  RK+VT L++K KL  V+ +V+  D  KPWG +A+ KVG+RL
Sbjct: 301 NTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARL 360

Query: 366 IELLTQTAYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGL 425
           I+LL + AYIQPP +Q  DGPPDIRPAF+ +FR V  E N  +SRRYG IECDPLV+ GL
Sbjct: 361 IQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTVTLE-NTKTSRRYGCIECDPLVLKGL 420

Query: 426 ERTARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTPKQQLTPV 485
           +++ARHMVIPY+PML+PP NWTGYD+G H FLPS++MRT GA QQR  +KRTPK+QL PV
Sbjct: 421 DKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPV 480

Query: 486 FEALDTLGNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDETLLRKWKW 545
           +EALDTLGNTKW+INKK+LS+VDRIW +GGR+  LVDR+DVP+PE+P+ ED+   + W+W
Sbjct: 481 YEALDTLGNTKWKINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRW 540

Query: 546 KVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPYLNHLGSD 605
           + K   K+N ERHSQRCDIELKL VARKMKDEEGFYYPHN+DFRGRAYP+HPYLNHLGSD
Sbjct: 541 ESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSD 600

Query: 606 LCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDIFDSADRP 665
           LCRGILEF EG+PL KSGLRWLKIH+ANL+AGGVDKL+++ R+ F ++H+EDIFDS+DRP
Sbjct: 601 LCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDRIAFTESHLEDIFDSSDRP 660

Query: 666 LEGRRWWLNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHYAALGRDK 725
           LEG+RWWLNAEDPFQ LA C+NL+EALR+  PE  ISHIPIHQDGSCNGLQHYAALGRDK
Sbjct: 661 LEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAAISHIPIHQDGSCNGLQHYAALGRDK 720

Query: 726 LGAAAVNLAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQVDRKLVKQ 785
           LGA AVNL   EKPADVY+ IAARVL+I+++DA+ DPETFP+A  AK ++DQVDRKLVKQ
Sbjct: 721 LGADAVNLVTGEKPADVYTEIAARVLKIMQQDAEEDPETFPNATYAKLMLDQVDRKLVKQ 780

Query: 786 TVMTSVYGVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMFEAARGIM 845
           TVMTSVYGVTY GAR+QIK+RLKER    DD+  F  +CYAAK TL AL EMFEAAR I 
Sbjct: 781 TVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTFHASCYAAKITLKALEEMFEAARAIK 840

Query: 846 SWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETDKVLVKRQ 905
           SW GDCAKIIASEN  V WTTPLGLPVVQPYRK G+H+VKT+LQVLTL +ETDKV+ +RQ
Sbjct: 841 SWFGDCAKIIASENNAVCWTTPLGLPVVQPYRKPGRHLVKTTLQVLTLSRETDKVMARRQ 900

Query: 906 RTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELY 965
            TAF PNF+HSLDGSHMMMTAVAC +AGL+FAGVHDS+WTHACDVD MN ILREKFVELY
Sbjct: 901 MTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAGVHDSFWTHACDVDVMNTILREKFVELY 960

Query: 966 ETPILENLLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 997
           E PILENLLE FQ+SFP + FPPLPERG+ DL++VLES YFFN
Sbjct: 961 EKPILENLLESFQKSFPDISFPPLPERGDFDLRKVLESTYFFN 976

BLAST of Cp4.1LG13g08100 vs. TAIR 10
Match: AT1G68990.2 (male gametophyte defective 3 )

HSP 1 Score: 1243.4 bits (3216), Expect = 0.0e+00
Identity = 632/1010 (62.57%), Postives = 776/1010 (76.83%), Query Frame = 0

Query: 6   MWKTIAKQAISKNRQFHLDWHCLSRSHGVMGRLNESIISEKLISDKFVLSSLPKFGISEL 65
           MW+ I  +A  +  +F  D    S +H  + R+   + S  L   +  LS  P   ++E+
Sbjct: 1   MWRNILGRASLRKVKFLSD-SSSSGTHYPVNRVRGILSSVNLSGVRNGLSINP---VNEM 60

Query: 66  GIGRSEVLSQEDYGSRFCFGSMGVRIGLNGSFPKGYSSVAEAVSSTDVDEDSSIDEEIQE 125
           G      LS   +G  + F              +GY++ A+A+ STD +++SS  +E+ E
Sbjct: 61  G-----GLSSFRHGQCYVF--------------EGYATAAQAIDSTDPEDESSGSDEVNE 120

Query: 126 LLQEMRKEEKRQVQRRRRRL-----KRV-KGMGEQKYQMLKRRQVAIETEAWKQAVKEYK 185
           L+ EM KE +R   R++ RL     KRV  GMG QK+ MLK+RQV +ETE W++A +E +
Sbjct: 121 LITEMEKETER--IRKKARLAAIPPKRVIAGMGAQKFYMLKQRQVKMETEEWERAARECR 180

Query: 186 ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAISKEQELIRIGKNRAAYAPYFDQLSADM 245
           E+L DMCEQKLAPNLPYMKSLFLGWFEP+R+AI  + +  +I K +  YAP+ +QL AD 
Sbjct: 181 EILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADK 240

Query: 246 MSVVTMHKLIGLLMMGHEH-GNARVVQAACAIGDAIEQEVRIHRFLEKMKKKKHDKDNEN 305
           M+V+TMHK++GLLM   E  G  ++V AA  IG+A+EQEVRI+ FL+K K KK+  D   
Sbjct: 241 MAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGEAVEQEVRINSFLQK-KNKKNATDKTI 300

Query: 306 NDKPDS-----QLKEQEWLRKKVTNLIKKQKLPAVRHIVKGTDDSKPWGPDAKAKVGSRL 365
           N + ++       KE E  RK+VT L++K KL  V+ +V+  D  KPWG +A+ KVG+RL
Sbjct: 301 NTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARL 360

Query: 366 IELLTQTAYIQPPVDQLADGPPDIRPAFRHSFRIVMKEANKNSSRRYGVIECDPLVVNGL 425
           I+LL + AYIQPP +Q  DGPPDIRPAF+ +FR V  E N  +SRRYG IECDPLV+ GL
Sbjct: 361 IQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTVTLE-NTKTSRRYGCIECDPLVLKGL 420

Query: 426 ERT-------ARHMVIPYMPMLVPPVNWTGYDKGGHIFLPSFIMRTRGANQQREAVKRTP 485
           +++       ARHMVIPY+PML+PP NWTGYD+G H FLPS++MRT GA QQR  +KRTP
Sbjct: 421 DKSVSRIVDYARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTP 480

Query: 486 KQQLTPVFEALDTLGNTKWRINKKILSIVDRIWTSGGRLADLVDRDDVPLPEKPDSEDET 545
           K+QL PV+EALDTLGNTKW+INKK+LS+VDRIW +GGR+  LVDR+DVP+PE+P+ ED+ 
Sbjct: 481 KEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPEREDQE 540

Query: 546 LLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNIDFRGRAYPMHPY 605
             + W+W+ K   K+N ERHSQRCDIELKL VARKMKDEEGFYYPHN+DFRGRAYP+HPY
Sbjct: 541 KFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPY 600

Query: 606 LNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFAGGVDKLSHDGRMTFIDNHVEDI 665
           LNHLGSDLCRGILEF EG+PL KSGLRWLKIH+ANL+AGGVDKL+++ R+ F ++H+EDI
Sbjct: 601 LNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYEDRIAFTESHLEDI 660

Query: 666 FDSADRPLEGRRWWLNAEDPFQFLAGCMNLTEALRNSSPETVISHIPIHQDGSCNGLQHY 725
           FDS+DRPLEG+RWWLNAEDPFQ LA C+NL+EALR+  PE  ISHIPIHQDGSCNGLQHY
Sbjct: 661 FDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAAISHIPIHQDGSCNGLQHY 720

Query: 726 AALGRDKLGAAAVNLAVREKPADVYSGIAARVLEIVRKDAQRDPETFPDALRAKTLIDQV 785
           AALGRDKLGA AVNL   EKPADVY+ IAARVL+I+++DA+ DPETFP+A  AK ++DQV
Sbjct: 721 AALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIMQQDAEEDPETFPNATYAKLMLDQV 780

Query: 786 DRKLVKQTVMTSVYGVTYIGAREQIKRRLKERAVISDDTELFGCACYAAKTTLTALGEMF 845
           DRKLVKQTVMTSVYGVTY GAR+QIK+RLKER    DD+  F  +CYAAK TL AL EMF
Sbjct: 781 DRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTFHASCYAAKITLKALEEMF 840

Query: 846 EAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGKHIVKTSLQVLTLQQETD 905
           EAAR I SW GDCAKIIASEN  V WTTPLGLPVVQPYRK G+H+VKT+LQVLTL +ETD
Sbjct: 841 EAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYRKPGRHLVKTTLQVLTLSRETD 900

Query: 906 KVLVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILR 965
           KV+ +RQ TAF PNF+HSLDGSHMMMTAVAC +AGL+FAGVHDS+WTHACDVD MN ILR
Sbjct: 901 KVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAGVHDSFWTHACDVDVMNTILR 960

Query: 966 EKFVELYETPILENLLEGFQQSFPALDFPPLPERGELDLKEVLESPYFFN 997
           EKFVELYE PILENLLE FQ+SFP + FPPLPERG+ DL++VLES YFFN
Sbjct: 961 EKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKVLESTYFFN 983

BLAST of Cp4.1LG13g08100 vs. TAIR 10
Match: AT2G24120.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 1156.4 bits (2990), Expect = 0.0e+00
Identity = 553/852 (64.91%), Postives = 687/852 (80.63%), Query Frame = 0

Query: 149 KGMGEQKYQMLKRRQVAIETEAWKQAVKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPL 208
           K + ++K+  L+RRQV  ETEAW++ V EY++L  +MCE+ LAPNLPY+K +FLGWF+PL
Sbjct: 152 KDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPL 211

Query: 209 RDAISKEQEL--IRIGKNRAAYAPYFDQLSADMMSVVTMHKLIGLLMMGHEHGNARVVQA 268
           +D I +EQ+L   +  K RAAYAP+ + L AD M+V+ MHK++GL+M GHE G  +VVQA
Sbjct: 212 KDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQVVQA 271

Query: 269 ACAIGDAIEQEVRIHRFLEKMKKKKHDKDNENNDKPDSQ--LKEQEWLRKKVTNLIKKQK 328
           A +IG AIEQEVRIH FL++ +K         N+  DSQ  LKE++ LRK+V +LI++++
Sbjct: 272 AVSIGIAIEQEVRIHNFLKRTRK---------NNAGDSQEELKEKQLLRKRVNSLIRRKR 331

Query: 329 LPAVRHIVKGTDDSKPWGPDAKAKVGSRLIELLTQTAYIQPPVDQLADGPPDIRPAFRHS 388
           +     +VK ++ +KPWG   +AK+GSRL+ELL + AY+QPP+ Q  D  P+ RPAFRH 
Sbjct: 332 IIDALKVVK-SEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHR 391

Query: 389 FRIVMKEANKNSSRRYGVIECDPLVVNGLERTARHMVIPYMPMLVPPVNWTGYDKGGHIF 448
           F+ V K       RRYGVIECD L++ GL+++A+HM+IPY+PMLVPP  W GYDKGG++F
Sbjct: 392 FKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLF 451

Query: 449 LPSFIMRTRGANQQREAVKRTPKQQLTPVFEALDTLGNTKWRINKKILSIVDRIWTSGGR 508
           LPS+IMRT G+ +Q++A+K    +    VFEALDTLGNTKWR+N+ IL +V+R+W  GG 
Sbjct: 452 LPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGN 511

Query: 509 LADLVDRDDVPLPEKPDSEDETLLRKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKD 568
           +A LV+R+DVP+PEKP SED   L+ WKW  +   K N ERHS RCD+ELKL+VARKMKD
Sbjct: 512 IAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKD 571

Query: 569 EEGFYYPHNIDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLRKSGLRWLKIHLANLFA 628
           EEGFYYPHN+DFRGRAYPMHP+LNHL SDLCRG LEFAEGRPL KSGL WLKIHLANL+A
Sbjct: 572 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYA 631

Query: 629 GGVDKLSHDGRMTFIDNHVEDIFDSADRPLEGRRWWLNAEDPFQFLAGCMNLTEALRNSS 688
           GGV+KLSHD R+ F++NH++DI DSA+ P+ G+RWWL AEDPFQ LA C+ LT+AL++ S
Sbjct: 632 GGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPS 691

Query: 689 PETVISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLAVREKPADVYSGIAARVLEIVRK 748
           P +VISH+PIHQDGSCNGLQHYAALGRD   AAAVNL   EKPADVYS I+ RV EI++K
Sbjct: 692 PYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKK 751

Query: 749 DAQRDPETFPDALRAKTLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERAVISDD 808
           D+ +DPE+ P A  AK LI QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ VI+D+
Sbjct: 752 DSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDE 811

Query: 809 TELFGCACYAAKTTLTALGEMFEAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPY 868
             LF  ACY+AK TL ALGE+FEAAR IMSWLGDCAKIIAS+N PVRW TPLGLPVVQPY
Sbjct: 812 RMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPY 871

Query: 869 RKLGKHIVKTSLQVLTLQQETDKVLVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNF 928
            +  +H+++TSLQVL LQ+E + V V++QRTAFPPNFVHSLDG+HMMMTAVAC++AGLNF
Sbjct: 872 CRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNF 931

Query: 929 AGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEGFQQSFPALDFPPLPERGELD 988
           AGVHDSYWTHACDVD MNRILREKFVELY TPILE+LL+ FQ+S+P L FPP+P+RG+ D
Sbjct: 932 AGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFD 991

Query: 989 LKEVLESPYFFN 997
           LKEVL+S YFFN
Sbjct: 992 LKEVLKSQYFFN 993