Cp4.1LG13g07810 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG13g07810
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionthioredoxin H-type-like
LocationCp4.1LG13: 8455779 .. 8460783 (+)
RNA-Seq ExpressionCp4.1LG13g07810
SyntenyCp4.1LG13g07810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAACCTAAAAAAAAATTGGAAGAGTCTCTAATTTTTTATTTAGTGGATCGACATCCGATCGTTACAGATGGAGGTTGATCTGTATTCTGATCCCTCGCCGCAAAAATTGGCTTGTTCTTCTCGATAATTTTCCCTCTGCTCTCACATTCTTTGTTCTCCTTCAACCAATGCATTTCAGCCTTAATTAGAAGTTTTTTTCTCGAAATTTTCGTTTTCGTCTTCGTCCTCTTCCTTCTCTAGGCGCTGCTTCTCCTGAAATCTCAGGATCGGCTTCAATGATGAGTTGTACAAGATGCTGAATCAACGCTATCCCAAGGTAATGATGATCTGTCCATGTTTTTGCACTTCTTTTGGTTCTGGTAGTCGAGATTCGTTGTATGGAGAGAATAGGGAGGTCCGTTGATTCGATTAAATCTAAAATTCGTAAATATGATAATTCCTTTGCGCTCATTGATAATGATCCATGCGTATTGTTTTTCTTATATGTTTTTGCTCTCTCTGATTCCGTATCCTTGGTTGAATATCTGCATCTCATATTTGCTTCTGAGGTGCAATGAAATCTCTGCTTTGATGCTATGCGGCCATTGCCGTGATGGATTCCCCAGTTTTCTCTGTAAATTTCGAAGAGAGACCGTTTTGTTAATACTTGAGAGCTGTTTTGGAAACGGTTCTTTTTCGTATTTATTTCCAAAGTTAGTTTTAGGATTGTGATTTGAAAAATTTATAGGAACTAATGCATTGACATCGAGATCTCTGTCCGTGATTTTGGAAGATAACTTTATTTTATTTTTGTAAAACCGATCATTTCTGGAAACACACTTTACGAAAAGAAGAAAAGCAATTTTGAGAAATGGTTAACGAACATGATTGTTTCGTTCTTTTTCCTTCAAACAAGAGGAATGTTAGACTAACAGTTTCGGGATGATCCATCGGTTTCAGTTTCTCACCACCATTTCATTAATAGATAAAAAAGAAGGTAGTTTTTATCTTTCAAGTCTATTAGAACAAAAATAGTTAACAGGCATAAAACCTGTACCATCAACCTAAAATGTTTGAATCTCTTACCTTACATATTATTGAATTATATATATATATATATATATATACATATTCTTTGTTCCTTATCTTTGTTTCCATGAAAAAAAAATGAGAGTTAATTCGAAATTGTTTCTTGTGAAGTTCAGGTTTTAGAATTAGGTCTGAGATACGAGAAACAAAAAAAAAATGTCAATTCTCCTATGAAAGGTTAGCTTAATTGGTTACCTCCTAAAGAAGGAAGAAAATCCATCGACGACTTTGTTGAACTGAAAAAAAAAAATGTAACTATTATAATGACAACAACGGATGCATCAACTGCTAGGACATCTTCCTCCCTTCACCTTCCTTTCACGTCTTAAGGCCACGGTCCAAAAAATTATTGGTTTGAGTTGACTTCATTCTCTAGTTTAAAATCGGTGAGCAAAGAGAATGGGAACATGACTTTTGGTATTTGATGTTTCCATGTTTAGGATTTCATGATCTTGCATTAGATACCAATATAGTTTTGTTTCTTGCTCGTGCTTCGTAAAGGCATACTTTGTTTGAGTTTGAAGGTATGTTACCCTTCTTGTGAGGTTAGTTTACAAATGACTAGTTCGTTGGATTTTAATGCAAAAATAGATATCTTATGAATGGGAATCTACCTATGCCCTCCTTCTCTCATCTTAAGAATTTTTATCATATAGGGCTAGAACAAAAATGACAATTGCACAAAGCAAAAGGAAAAAGAAGTTCAAAATAGAGTATCGTGAAAACTTGAGCAAAGTGTAAGGCTTTTTTCTTCAAGTTTCCAGTGCAACTGATTGCAGTCTCCATTGGAAAATGAATTAAGATCTAATCTCACATGTATTCTCGACTGATACATATCATGCAACTTAACAGGTGTCCTGTTTGGAAACGACCTTAATTTTTTCAGACAGAGATTCGATTTTGCATTTTCAATGGGAAGCTGCTGGACTAAGGTATGCCTCGCTGGCAATTTATCTTTCATATTATGTTTTCAAGGTCTTGATTTCTCGTATAGTGTTCTCTGCTTTATTTTGTTTGCTAGCCTCGCAGTTTCTGGCATGCCTTTTGTACATTTTATTTTTATTCATCAAGTTCATGGTCATCATGGGTCCACATAACCAAGTGGAGGTTTGAAAATAGCACTTCGCTTCTGTAAATTCTTACTTGTTCAGAATCATACGAGTCCACTGAATTTTCAGAGGATCAAATTTTCTCTCTTTCAAATATCATAATATCTGAACTCTCTCTTTCACATAGATTTTTTAAATAAATCTACTTTAAAGAGATTTATCCTGAAAATTTTATTCGAAGTTCCACTGCTCCATGTCTGCTAATGGTCAGTATTGACTTATTCCTCTTTCCCTCATTTACATGATCAATGTTAGAACCTTAGATGATAGTGTTACAGTGGTAGTATCCAAGTTCTCGTCCTTAAGACCCATCCTCTGAAAAATTATTGGACATGAACATGACCGTATTCTAATTATTAGATGTATGATTAAACCATACTTTTTAAGTTCTGTGTCATATCTCCAACGGGATAATGGTAAATGATTCTGTTTCAACCTAATCAATTATTTTTTCATCTACTGAGTTACATCCACACTTGACATTTTGCAGCTTTTCAATAGCGATCAGAAAGACAATGCCGTCAAGGAGCAAGTTGATAGCAAAAACGTACACCTCATTACGTCGATTGAGAAGTGGGAGGCGAAGCTTTCGGAAGCAACTAAAGATGGCAAAATTGTAAGTTTCTCCCTCACTTGTTCGTGGTGTAAGAAAAATATACAGAGTGTTTTATGTTTAAACTATGCAACAGGTTGTTGCAAATTTCAGTGCACCATGGTGTAGACCTTGTAAATCCATGACACCAGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGACGTCGATGAGCTAGCTGTGAGTAAATCCATCTTTTGGTTACCCTTCGTTTATTTATATAACTGCGAATATGAATCTAGCTAGCTCTCCACTGACGGAGTGTTCTTATCCATGACCTCACACTTCCATTTTTACAGTTTGTATGGTTTTTGTTTCTTATTTCTTCACTCTCATTTTCTGTTTTCATTCGTTTGTTTCTTGTTTTTGGAAAAAGAAACATAAGAATTATTTCTTGATTTTTGTTTTTTTAATTGTATATAGTTGTGTTTGGTAACTATTTTTTTATTTTATCCTCTAAAATTTCAAAACTATCATCTTATATTTGATTTTTGATGTAGTAAGCATTTTTTTTTAATAAGAAATGATAAATTAGTGTGTTTAAAAACTATAAACAAAAAACTAATTTTGGGAATTTTCTTCTGTTTTTTTTTTTTTCTAGTTAAACTAAGAGATTTTGATTGGTGGACGACATATATTTTAATTTATTGAGTTGTGAAAAAAAAAAAAAGAATTGAAAACATTACAAAAAAAAAGTGTCCTAAATCCTAATTTAAATTGATAATGGTATAGTTGATTGTATAGTATGGTGAGTTTTAGAAGTTTGTTAGACTGAGGTCGGGTGAGGTGGGGTTTTTTAATTTTAATTTTATTTATTTTGCAGGAGCTCAGTAAATCGTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAATAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAGCTGCCATGGACGAGGCTTGATACTTTTTCTTCCCCATTTACTGATACATAATAGAACACCGAAAGCACAATACAAATTCCCATAACAAAACAACAAGGAAAACAAAAACAAAAAAACAAAAAAAAAGTGCATTAGAGGGAGGAATTCTTTTGTGCTTTCTTACCCAATTTCAGTGAGAAATTCGTTCCATGCTCAGAGGATAAGTCATCATTCGTTATGGTTCCTTGCTTGCAAGAGAACACGATGTACTGCTGTCAAATGCACAATTTGAAACAATTACGAAGCACTATATAATTGTAGTTTTATTGTTGAATCACAAGAATTTTCAGATGTTCTTATTTTAGCATAAGAGAGAGAAAGAGTGTGAAAATGAAAAATGCCCTCTCCCTCCCCTTGTTTAGTTACATGCCGCCGTTGAGGAGGCGGCAGCAGCTGCAGCAGCTTTTACGAGCAAGCCAAAGAGCAGAGAGGGGTTGGAGAAAAAGGGGCTGTGATCAGTATCCATTTCATATACGATTTCGGGTAGCCATTCCCTTATCATCGCCTCTTGTTGCTCTGGTTTTATTACTCGATCGTACGTTGTTCTTATATACACTCGTTTCACCCTATCCAGCTCGCCGTTCTCCTCCCTAAACCGAGCGGTCCTTAATGCGAGGATTGGCCCTGGCCTCAATAGCATGGAGGCCAGTGTCGAATCCTGAGAATCATTGATAACATCAAAACACCGGGTATCATGATGGAGGTTAGATACAATTGCTTCTTAATTCATGGTATGTTTGTTTGGGATGGCATGTTCAAAATCAAATCAATTTTGGCAGCGTAAGATCAAATATTAAATACATTTTGACTGGTCAAAGGATTTTAAATGTTTTAGAACACTTTCAGGCATGTTTTTAGGATCAAATGCAATTATATTAAAAATCTCAAGGCAGGAAAGGATCTCGTGGTTGGATTGGGGATGATTCCAAAACTAAGAAACTATTTTACTTTATTATTATTTTTATTTTTGTGGGTTTAGGTACCTCGTGGGGACTCATGTGATAGATGATCTTTCGCTGGAGTTCCCTTTTGACGACAGCAGTGGTCGGAGGTTGTTGGGGTCCTTGTCCAAATCCTACGTCGTAAGCATCCCCAAACTCGGATAAATCTGGCACTCCCTGCACATTTGACCAAAACAAAAACAAAAGGTAATAATCATAACGGAAATGGTTAACTCGTTAATAATGACCTAATCATCTTAATCTTATATTATATAAT

mRNA sequence

TGAACCTAAAAAAAAATTGGAAGAGTCTCTAATTTTTTATTTAGTGGATCGACATCCGATCGTTACAGATGGAGGTTGATCTGTATTCTGATCCCTCGCCGCAAAAATTGGCTTGTTCTTCTCGATAATTTTCCCTCTGCTCTCACATTCTTTGTTCTCCTTCAACCAATGCATTTCAGCCTTAATTAGAAGTTTTTTTCTCGAAATTTTCGTTTTCGTCTTCGTCCTCTTCCTTCTCTAGGCGCTGCTTCTCCTGAAATCTCAGGATCGGCTTCAATGATGAGTTGTACAAGATGCTGAATCAACGCTATCCCAAGGGCTAGAACAAAAATGACAATTGCACAAAGCAAAAGGAAAAAGAAGTTCAAAATAGAGTATCGTGAAAACTTGAGCAAAGTGTGTCCTGTTTGGAAACGACCTTAATTTTTTCAGACAGAGATTCGATTTTGCATTTTCAATGGGAAGCTGCTGGACTAAGCTTTTCAATAGCGATCAGAAAGACAATGCCGTCAAGGAGCAAGTTGATAGCAAAAACGTACACCTCATTACGTCGATTGAGAAGTGGGAGGCGAAGCTTTCGGAAGCAACTAAAGATGGCAAAATTGTTGTTGCAAATTTCAGTGCACCATGGTGTAGACCTTGTAAATCCATGACACCAGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGACGTCGATGAGCTAGCTGAGCTCAGTAAATCGTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAATAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAGCTGCCATGGACGAGGCTTGATACTTTTTCTTCCCCATTTACTGATACATAATAGAACACCGAAAGCACAATACAAATTCCCATAACAAAACAACAAGGAAAACAAAAACAAAAAAACAAAAAAAAAGTGCATTAGAGGGAGGAATTCTTTTGTGCTTTCTTACCCAATTTCAGTGAGAAATTCGTTCCATGCTCAGAGGATAAGTCATCATTCGTTATGGTTCCTTGCTTGCAAGAGAACACGATGTACTGCTGTCAAATGCACAATTTGAAACAATTACGAAGCACTATATAATTGTAGTTTTATTGTTGAATCACAAGAATTTTCAGATGTTCTTATTTTAGCATAAGAGAGAGAAAGAGTGTGAAAATGAAAAATGCCCTCTCCCTCCCCTTGTTTAGTTACATGCCGCCGTTGAGGAGGCGGCAGCAGCTGCAGCAGCTTTTACGAGCAAGCCAAAGAGCAGAGAGGGGTTGGAGAAAAAGGGGCTGTGATCAGTATCCATTTCATATACGATTTCGGGTAGCCATTCCCTTATCATCGCCTCTTGTTGCTCTGGTTTTATTACTCGATCGTACGTTGTTCTTATATACACTCGTTTCACCCTATCCAGCTCGCCGTTCTCCTCCCTAAACCGAGCGGTCCTTAATGCGAGGATTGGCCCTGGCCTCAATAGCATGGAGGCCAGTGTCGAATCCTGAGAATCATTGATAACATCAAAACACCGGGTATCATGATGGAGGTTAGATACAATTGCTTCTTAATTCATGGTATGTTTGTTTGGGATGGCATGTTCAAAATCAAATCAATTTTGGCAGCGTAAGATCAAATATTAAATACATTTTGACTGGTCAAAGGATTTTAAATGTTTTAGAACACTTTCAGGCATGTTTTTAGGATCAAATGCAATTATATTAAAAATCTCAAGGCAGGAAAGGATCTCGTGGTTGGATTGGGGATGATTCCAAAACTAAGAAACTATTTTACTTTATTATTATTTTTATTTTTGTGGGTTTAGGTACCTCGTGGGGACTCATGTGATAGATGATCTTTCGCTGGAGTTCCCTTTTGACGACAGCAGTGGTCGGAGGTTGTTGGGGTCCTTGTCCAAATCCTACGTCGTAAGCATCCCCAAACTCGGATAAATCTGGCACTCCCTGCACATTTGACCAAAACAAAAACAAAAGGTAATAATCATAACGGAAATGGTTAACTCGTTAATAATGACCTAATCATCTTAATCTTATATTATATAAT

Coding sequence (CDS)

ATGGGAAGCTGCTGGACTAAGCTTTTCAATAGCGATCAGAAAGACAATGCCGTCAAGGAGCAAGTTGATAGCAAAAACGTACACCTCATTACGTCGATTGAGAAGTGGGAGGCGAAGCTTTCGGAAGCAACTAAAGATGGCAAAATTGTTGTTGCAAATTTCAGTGCACCATGGTGTAGACCTTGTAAATCCATGACACCAGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGACGTCGATGAGCTAGCTGAGCTCAGTAAATCGTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAATAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAGCTGCCATGGACGAGGCTTGA

Protein sequence

MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQKIAAMDEA
Homology
BLAST of Cp4.1LG13g07810 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.1e-37
Identity = 73/131 (55.73%), Postives = 98/131 (74.81%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MG C  K  N D  D+    ++   NVHLIT+ E+W+ KLSEA++DGKIV+ANFSA WC 
Sbjct: 1   MGLCLAKR-NHDADDDEPHIELAGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCG 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCK + P + EL++ Y S++FL IDVDEL++ S SW+IKATPTF F +DG+QVDKL+GA+
Sbjct: 61  PCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGAN 120

Query: 121 KSDLQQKIAAM 132
           K +L +KI A+
Sbjct: 121 KPELHKKITAI 130

BLAST of Cp4.1LG13g07810 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.3e-36
Identity = 71/131 (54.20%), Postives = 98/131 (74.81%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MGSC +K    D  D+    +    NVHLIT+ E W+ KL+EA +DGKIVVANFSA WC 
Sbjct: 1   MGSCVSKGKGDD--DSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCG 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCK + P F EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KL+GA+
Sbjct: 61  PCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 120

Query: 121 KSDLQQKIAAM 132
           K +LQ+K+ ++
Sbjct: 121 KPELQKKVTSI 129

BLAST of Cp4.1LG13g07810 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.4e-34
Identity = 67/134 (50.00%), Postives = 94/134 (70.15%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MGSC  K    ++ D   K      NVH+I++ E W+ K++EA KDGKIV+ANFSA WC 
Sbjct: 1   MGSCVGK----ERSDEEDKIDFKGGNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCG 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PC+ + P + E++  Y   +FL IDVDEL + S SWDI+ATPTF F K+G QVDKL+GA+
Sbjct: 61  PCRVIAPVYAEMSQTYPQFMFLTIDVDELMDFSSSWDIRATPTFFFLKNGEQVDKLVGAN 120

Query: 121 KSDLQQKIAAMDEA 135
           K +L++K+AA+ ++
Sbjct: 121 KPELEKKVAALADS 130

BLAST of Cp4.1LG13g07810 vs. ExPASy Swiss-Prot
Match: Q9LXZ8 (Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 6.9e-34
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 0

Query: 3   SCWTKLF--------NSDQKDNAVKEQVDSK-NVHLITSIEKWEAKLSEATKDGKIVVAN 62
           SC  KL+        N++      + Q  SK  VH ++ IEKWE K++EA   GKI+V N
Sbjct: 9   SCCRKLWSCICCCSNNNNNSYGQTRSQHGSKGKVHPVSRIEKWEEKITEANNHGKILVVN 68

Query: 63  FSAPWCRPCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQV 122
           FSAPWC PCK + P F +LA +Y SM+F+ +DV+ELAE S  W+++ATPT VF KDGRQ+
Sbjct: 69  FSAPWCVPCKKIEPVFRDLASRYPSMIFVTVDVEELAEFSNEWNVEATPTVVFLKDGRQM 128

Query: 123 DKLIGADKSDLQQKIAA 131
           DKL+GA+ S+LQ+K AA
Sbjct: 129 DKLVGAETSELQKKTAA 145

BLAST of Cp4.1LG13g07810 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-32
Identity = 66/131 (50.38%), Postives = 90/131 (68.70%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MG C  K     ++D   K      NVH+ITS E W+ K+ EA KDGKIVVANFSA WC 
Sbjct: 1   MGGCVGKGRRHIEED---KLDFKGGNVHVITSKEDWDRKIEEANKDGKIVVANFSASWCG 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PC+ + P + E++  Y  ++FL IDVD+L + S SWDI+ATPTF F K+ +QVDKL+GA+
Sbjct: 61  PCRVIAPIYAEMSKTYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFIKNEKQVDKLVGAN 120

Query: 121 KSDLQQKIAAM 132
           K +L++K+ A+
Sbjct: 121 KPELEKKVQAL 128

BLAST of Cp4.1LG13g07810 vs. NCBI nr
Match: XP_022939124.1 (thioredoxin H-type-like [Cucurbita moschata] >XP_022993027.1 thioredoxin H-type-like [Cucurbita maxima] >XP_022993028.1 thioredoxin H-type-like [Cucurbita maxima] >XP_023551106.1 thioredoxin H-type-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551107.1 thioredoxin H-type-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6578492.1 hypothetical protein SDJN03_22940, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016057.1 hypothetical protein SDJN02_21161 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274 bits (701), Expect = 6.42e-93
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR
Sbjct: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD
Sbjct: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120

Query: 121 KSDLQQKIAAMDEA 134
           KSDLQQKIAAMDEA
Sbjct: 121 KSDLQQKIAAMDEA 134

BLAST of Cp4.1LG13g07810 vs. NCBI nr
Match: XP_023551108.1 (thioredoxin H-type-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257 bits (656), Expect = 3.84e-86
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0

Query: 8   LFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTP 67
           LFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTP
Sbjct: 2   LFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTP 61

Query: 68  AFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQK 127
           AFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQK
Sbjct: 62  AFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQK 121

Query: 128 IAAMDEA 134
           IAAMDEA
Sbjct: 122 IAAMDEA 128

BLAST of Cp4.1LG13g07810 vs. NCBI nr
Match: XP_038890472.1 (thioredoxin H4-1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 246 bits (629), Expect = 7.53e-82
Identity = 118/134 (88.06%), Postives = 126/134 (94.03%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MG+CWTK FNS Q+D A  + VDSKNVHLITS+EKWEAKL EATKDGKIV+ANFSAPWCR
Sbjct: 1   MGNCWTKFFNSVQEDYAEVQNVDSKNVHLITSMEKWEAKLLEATKDGKIVIANFSAPWCR 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKIAAMDEA 134
           KSDLQQKIAAMDE+
Sbjct: 121 KSDLQQKIAAMDES 134

BLAST of Cp4.1LG13g07810 vs. NCBI nr
Match: XP_004141512.2 (thioredoxin H4-1 isoform X1 [Cucumis sativus] >KGN52589.1 hypothetical protein Csa_008226 [Cucumis sativus])

HSP 1 Score: 244 bits (622), Expect = 9.73e-81
Identity = 117/134 (87.31%), Postives = 126/134 (94.03%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MG+CWTKLFNS Q+D A  + VDSKNVHLITS+EKWEAKL EAT+DGKIV+ANFSA WCR
Sbjct: 1   MGNCWTKLFNSGQEDYAEVQNVDSKNVHLITSMEKWEAKLLEATEDGKIVIANFSAHWCR 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKIAAMDEA 134
           KSDLQQKIAAMDE+
Sbjct: 121 KSDLQQKIAAMDES 134

BLAST of Cp4.1LG13g07810 vs. NCBI nr
Match: XP_008459484.1 (PREDICTED: thioredoxin H-type [Cucumis melo])

HSP 1 Score: 241 bits (616), Expect = 8.00e-80
Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MG+CWTKLFNS Q+D    + VDSKNVHLITS+EKWEAKL EAT+DGKIV+ANFSA WCR
Sbjct: 1   MGNCWTKLFNSAQEDYREVQNVDSKNVHLITSMEKWEAKLLEATQDGKIVIANFSAHWCR 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKIAAMDEA 134
           KSDLQQKIAAMDE+
Sbjct: 121 KSDLQQKIAAMDES 134

BLAST of Cp4.1LG13g07810 vs. ExPASy TrEMBL
Match: A0A6J1JRL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 3.11e-93
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR
Sbjct: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD
Sbjct: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120

Query: 121 KSDLQQKIAAMDEA 134
           KSDLQQKIAAMDEA
Sbjct: 121 KSDLQQKIAAMDEA 134

BLAST of Cp4.1LG13g07810 vs. ExPASy TrEMBL
Match: A0A6J1FG71 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111445124 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 3.11e-93
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR
Sbjct: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD
Sbjct: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120

Query: 121 KSDLQQKIAAMDEA 134
           KSDLQQKIAAMDEA
Sbjct: 121 KSDLQQKIAAMDEA 134

BLAST of Cp4.1LG13g07810 vs. ExPASy TrEMBL
Match: A0A0A0KUM3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 4.71e-81
Identity = 117/134 (87.31%), Postives = 126/134 (94.03%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MG+CWTKLFNS Q+D A  + VDSKNVHLITS+EKWEAKL EAT+DGKIV+ANFSA WCR
Sbjct: 1   MGNCWTKLFNSGQEDYAEVQNVDSKNVHLITSMEKWEAKLLEATEDGKIVIANFSAHWCR 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKIAAMDEA 134
           KSDLQQKIAAMDE+
Sbjct: 121 KSDLQQKIAAMDES 134

BLAST of Cp4.1LG13g07810 vs. ExPASy TrEMBL
Match: A0A1S3CBI4 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1)

HSP 1 Score: 241 bits (616), Expect = 3.87e-80
Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MG+CWTKLFNS Q+D    + VDSKNVHLITS+EKWEAKL EAT+DGKIV+ANFSA WCR
Sbjct: 1   MGNCWTKLFNSAQEDYREVQNVDSKNVHLITSMEKWEAKLLEATQDGKIVIANFSAHWCR 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKIAAMDEA 134
           KSDLQQKIAAMDE+
Sbjct: 121 KSDLQQKIAAMDES 134

BLAST of Cp4.1LG13g07810 vs. ExPASy TrEMBL
Match: A0A6J1JH67 (thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1)

HSP 1 Score: 238 bits (608), Expect = 6.42e-79
Identity = 114/134 (85.07%), Postives = 125/134 (93.28%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MG+CWTK+F+SDQ+D A  + VDSKNVHLI S+EKWEAKL EAT+DGKIV+ANFSA W R
Sbjct: 1   MGNCWTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSR 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCKSMTPA+CELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKL+GAD
Sbjct: 61  PCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGAD 120

Query: 121 KSDLQQKIAAMDEA 134
           KSDLQQKI AMDE+
Sbjct: 121 KSDLQQKITAMDES 134

BLAST of Cp4.1LG13g07810 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 152.5 bits (384), Expect = 2.4e-37
Identity = 71/131 (54.20%), Postives = 98/131 (74.81%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MGSC +K    D  D+    +    NVHLIT+ E W+ KL+EA +DGKIVVANFSA WC 
Sbjct: 1   MGSCVSKGKGDD--DSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCG 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCK + P F EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KL+GA+
Sbjct: 61  PCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 120

Query: 121 KSDLQQKIAAM 132
           K +LQ+K+ ++
Sbjct: 121 KPELQKKVTSI 129

BLAST of Cp4.1LG13g07810 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 )

HSP 1 Score: 152.5 bits (384), Expect = 2.4e-37
Identity = 71/131 (54.20%), Postives = 98/131 (74.81%), Query Frame = 0

Query: 1   MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCR 60
           MGSC +K    D  D+    +    NVHLIT+ E W+ KL+EA +DGKIVVANFSA WC 
Sbjct: 1   MGSCVSKGKGDD--DSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCG 60

Query: 61  PCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGAD 120
           PCK + P F EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KL+GA+
Sbjct: 61  PCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 120

Query: 121 KSDLQQKIAAM 132
           K +LQ+K+ ++
Sbjct: 121 KPELQKKVTSI 129

BLAST of Cp4.1LG13g07810 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein )

HSP 1 Score: 144.8 bits (364), Expect = 4.9e-35
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 0

Query: 3   SCWTKLF--------NSDQKDNAVKEQVDSK-NVHLITSIEKWEAKLSEATKDGKIVVAN 62
           SC  KL+        N++      + Q  SK  VH ++ IEKWE K++EA   GKI+V N
Sbjct: 9   SCCRKLWSCICCCSNNNNNSYGQTRSQHGSKGKVHPVSRIEKWEEKITEANNHGKILVVN 68

Query: 63  FSAPWCRPCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQV 122
           FSAPWC PCK + P F +LA +Y SM+F+ +DV+ELAE S  W+++ATPT VF KDGRQ+
Sbjct: 69  FSAPWCVPCKKIEPVFRDLASRYPSMIFVTVDVEELAEFSNEWNVEATPTVVFLKDGRQM 128

Query: 123 DKLIGADKSDLQQKIAA 131
           DKL+GA+ S+LQ+K AA
Sbjct: 129 DKLVGAETSELQKKTAA 145

BLAST of Cp4.1LG13g07810 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 )

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-31
Identity = 59/104 (56.73%), Postives = 78/104 (75.00%), Query Frame = 0

Query: 27  VHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTPAFCELADKYTSMVFLAIDV 86
           VH ++ +EKWE K++EA   GKI+V NF A WC P K++ P + ELA  YTSM+F+ IDV
Sbjct: 42  VHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMIFVTIDV 101

Query: 87  DELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQKIAA 131
           +ELAE S  W++ ATPT VF KDGRQ+DKL+G D ++LQ+K AA
Sbjct: 102 EELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGDAAELQKKTAA 145

BLAST of Cp4.1LG13g07810 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-22
Identity = 44/118 (37.29%), Postives = 77/118 (65.25%), Query Frame = 0

Query: 12  DQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTPAFCE 71
           + ++   +  ++   V  I S  + EAK   A K  ++++  F+A WC PC+ M+P +  
Sbjct: 257 EAQEREAQAALNDGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSN 316

Query: 72  LADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQKIA 130
           LA +++ +VFL +D+D+  +++ SW+I + PTF F +DG++VDK++GADK  L+QKIA
Sbjct: 317 LATQHSRVVFLKVDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIA 374

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P858015.1e-3755.73Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1[more]
Q9C9Y63.3e-3654.20Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1[more]
Q9AS752.4e-3450.00Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 S... [more]
Q9LXZ86.9e-3451.09Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2[more]
Q0DKF12.2e-3250.38Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 S... [more]
Match NameE-valueIdentityDescription
XP_022939124.16.42e-93100.00thioredoxin H-type-like [Cucurbita moschata] >XP_022993027.1 thioredoxin H-type-... [more]
XP_023551108.13.84e-86100.00thioredoxin H-type-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_038890472.17.53e-8288.06thioredoxin H4-1-like isoform X2 [Benincasa hispida][more]
XP_004141512.29.73e-8187.31thioredoxin H4-1 isoform X1 [Cucumis sativus] >KGN52589.1 hypothetical protein C... [more]
XP_008459484.18.00e-8086.57PREDICTED: thioredoxin H-type [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1JRL73.11e-93100.00thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1[more]
A0A6J1FG713.11e-93100.00thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111445124 PE=4 SV=1[more]
A0A0A0KUM34.71e-8187.31Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140... [more]
A0A1S3CBI43.87e-8086.57thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1[more]
A0A6J1JH676.42e-7985.07thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G08710.12.4e-3754.20thioredoxin H-type 9 [more]
AT3G08710.22.4e-3754.20thioredoxin H-type 9 [more]
AT3G56420.14.9e-3551.09Thioredoxin superfamily protein [more]
AT2G40790.11.5e-3156.73C-terminal cysteine residue is changed to a serine 2 [more]
AT3G17880.11.6e-2237.29tetraticopeptide domain-containing thioredoxin [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 97..108
score: 36.85
coord: 50..58
score: 50.0
coord: 58..67
score: 52.61
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..133
e-value: 1.4E-41
score: 143.3
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 6..133
NoneNo IPR availablePANTHERPTHR10438:SF394THIOREDOXIN-LIKE PROTEIN CXXS2-RELATEDcoord: 6..133
NoneNo IPR availableCDDcd02947TRX_familycoord: 40..129
e-value: 5.83681E-32
score: 106.874
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 34..129
e-value: 6.4E-23
score: 80.7
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 8..134
score: 13.832144
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 21..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g07810.1Cp4.1LG13g07810.1mRNA