![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Cp4.1LG13g07810 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAACCTAAAAAAAAATTGGAAGAGTCTCTAATTTTTTATTTAGTGGATCGACATCCGATCGTTACAGATGGAGGTTGATCTGTATTCTGATCCCTCGCCGCAAAAATTGGCTTGTTCTTCTCGATAATTTTCCCTCTGCTCTCACATTCTTTGTTCTCCTTCAACCAATGCATTTCAGCCTTAATTAGAAGTTTTTTTCTCGAAATTTTCGTTTTCGTCTTCGTCCTCTTCCTTCTCTAGGCGCTGCTTCTCCTGAAATCTCAGGATCGGCTTCAATGATGAGTTGTACAAGATGCTGAATCAACGCTATCCCAAGGTAATGATGATCTGTCCATGTTTTTGCACTTCTTTTGGTTCTGGTAGTCGAGATTCGTTGTATGGAGAGAATAGGGAGGTCCGTTGATTCGATTAAATCTAAAATTCGTAAATATGATAATTCCTTTGCGCTCATTGATAATGATCCATGCGTATTGTTTTTCTTATATGTTTTTGCTCTCTCTGATTCCGTATCCTTGGTTGAATATCTGCATCTCATATTTGCTTCTGAGGTGCAATGAAATCTCTGCTTTGATGCTATGCGGCCATTGCCGTGATGGATTCCCCAGTTTTCTCTGTAAATTTCGAAGAGAGACCGTTTTGTTAATACTTGAGAGCTGTTTTGGAAACGGTTCTTTTTCGTATTTATTTCCAAAGTTAGTTTTAGGATTGTGATTTGAAAAATTTATAGGAACTAATGCATTGACATCGAGATCTCTGTCCGTGATTTTGGAAGATAACTTTATTTTATTTTTGTAAAACCGATCATTTCTGGAAACACACTTTACGAAAAGAAGAAAAGCAATTTTGAGAAATGGTTAACGAACATGATTGTTTCGTTCTTTTTCCTTCAAACAAGAGGAATGTTAGACTAACAGTTTCGGGATGATCCATCGGTTTCAGTTTCTCACCACCATTTCATTAATAGATAAAAAAGAAGGTAGTTTTTATCTTTCAAGTCTATTAGAACAAAAATAGTTAACAGGCATAAAACCTGTACCATCAACCTAAAATGTTTGAATCTCTTACCTTACATATTATTGAATTATATATATATATATATATATATACATATTCTTTGTTCCTTATCTTTGTTTCCATGAAAAAAAAATGAGAGTTAATTCGAAATTGTTTCTTGTGAAGTTCAGGTTTTAGAATTAGGTCTGAGATACGAGAAACAAAAAAAAAATGTCAATTCTCCTATGAAAGGTTAGCTTAATTGGTTACCTCCTAAAGAAGGAAGAAAATCCATCGACGACTTTGTTGAACTGAAAAAAAAAAATGTAACTATTATAATGACAACAACGGATGCATCAACTGCTAGGACATCTTCCTCCCTTCACCTTCCTTTCACGTCTTAAGGCCACGGTCCAAAAAATTATTGGTTTGAGTTGACTTCATTCTCTAGTTTAAAATCGGTGAGCAAAGAGAATGGGAACATGACTTTTGGTATTTGATGTTTCCATGTTTAGGATTTCATGATCTTGCATTAGATACCAATATAGTTTTGTTTCTTGCTCGTGCTTCGTAAAGGCATACTTTGTTTGAGTTTGAAGGTATGTTACCCTTCTTGTGAGGTTAGTTTACAAATGACTAGTTCGTTGGATTTTAATGCAAAAATAGATATCTTATGAATGGGAATCTACCTATGCCCTCCTTCTCTCATCTTAAGAATTTTTATCATATAGGGCTAGAACAAAAATGACAATTGCACAAAGCAAAAGGAAAAAGAAGTTCAAAATAGAGTATCGTGAAAACTTGAGCAAAGTGTAAGGCTTTTTTCTTCAAGTTTCCAGTGCAACTGATTGCAGTCTCCATTGGAAAATGAATTAAGATCTAATCTCACATGTATTCTCGACTGATACATATCATGCAACTTAACAGGTGTCCTGTTTGGAAACGACCTTAATTTTTTCAGACAGAGATTCGATTTTGCATTTTCAATGGGAAGCTGCTGGACTAAGGTATGCCTCGCTGGCAATTTATCTTTCATATTATGTTTTCAAGGTCTTGATTTCTCGTATAGTGTTCTCTGCTTTATTTTGTTTGCTAGCCTCGCAGTTTCTGGCATGCCTTTTGTACATTTTATTTTTATTCATCAAGTTCATGGTCATCATGGGTCCACATAACCAAGTGGAGGTTTGAAAATAGCACTTCGCTTCTGTAAATTCTTACTTGTTCAGAATCATACGAGTCCACTGAATTTTCAGAGGATCAAATTTTCTCTCTTTCAAATATCATAATATCTGAACTCTCTCTTTCACATAGATTTTTTAAATAAATCTACTTTAAAGAGATTTATCCTGAAAATTTTATTCGAAGTTCCACTGCTCCATGTCTGCTAATGGTCAGTATTGACTTATTCCTCTTTCCCTCATTTACATGATCAATGTTAGAACCTTAGATGATAGTGTTACAGTGGTAGTATCCAAGTTCTCGTCCTTAAGACCCATCCTCTGAAAAATTATTGGACATGAACATGACCGTATTCTAATTATTAGATGTATGATTAAACCATACTTTTTAAGTTCTGTGTCATATCTCCAACGGGATAATGGTAAATGATTCTGTTTCAACCTAATCAATTATTTTTTCATCTACTGAGTTACATCCACACTTGACATTTTGCAGCTTTTCAATAGCGATCAGAAAGACAATGCCGTCAAGGAGCAAGTTGATAGCAAAAACGTACACCTCATTACGTCGATTGAGAAGTGGGAGGCGAAGCTTTCGGAAGCAACTAAAGATGGCAAAATTGTAAGTTTCTCCCTCACTTGTTCGTGGTGTAAGAAAAATATACAGAGTGTTTTATGTTTAAACTATGCAACAGGTTGTTGCAAATTTCAGTGCACCATGGTGTAGACCTTGTAAATCCATGACACCAGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGACGTCGATGAGCTAGCTGTGAGTAAATCCATCTTTTGGTTACCCTTCGTTTATTTATATAACTGCGAATATGAATCTAGCTAGCTCTCCACTGACGGAGTGTTCTTATCCATGACCTCACACTTCCATTTTTACAGTTTGTATGGTTTTTGTTTCTTATTTCTTCACTCTCATTTTCTGTTTTCATTCGTTTGTTTCTTGTTTTTGGAAAAAGAAACATAAGAATTATTTCTTGATTTTTGTTTTTTTAATTGTATATAGTTGTGTTTGGTAACTATTTTTTTATTTTATCCTCTAAAATTTCAAAACTATCATCTTATATTTGATTTTTGATGTAGTAAGCATTTTTTTTTAATAAGAAATGATAAATTAGTGTGTTTAAAAACTATAAACAAAAAACTAATTTTGGGAATTTTCTTCTGTTTTTTTTTTTTTCTAGTTAAACTAAGAGATTTTGATTGGTGGACGACATATATTTTAATTTATTGAGTTGTGAAAAAAAAAAAAAGAATTGAAAACATTACAAAAAAAAAGTGTCCTAAATCCTAATTTAAATTGATAATGGTATAGTTGATTGTATAGTATGGTGAGTTTTAGAAGTTTGTTAGACTGAGGTCGGGTGAGGTGGGGTTTTTTAATTTTAATTTTATTTATTTTGCAGGAGCTCAGTAAATCGTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAATAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAGCTGCCATGGACGAGGCTTGATACTTTTTCTTCCCCATTTACTGATACATAATAGAACACCGAAAGCACAATACAAATTCCCATAACAAAACAACAAGGAAAACAAAAACAAAAAAACAAAAAAAAAGTGCATTAGAGGGAGGAATTCTTTTGTGCTTTCTTACCCAATTTCAGTGAGAAATTCGTTCCATGCTCAGAGGATAAGTCATCATTCGTTATGGTTCCTTGCTTGCAAGAGAACACGATGTACTGCTGTCAAATGCACAATTTGAAACAATTACGAAGCACTATATAATTGTAGTTTTATTGTTGAATCACAAGAATTTTCAGATGTTCTTATTTTAGCATAAGAGAGAGAAAGAGTGTGAAAATGAAAAATGCCCTCTCCCTCCCCTTGTTTAGTTACATGCCGCCGTTGAGGAGGCGGCAGCAGCTGCAGCAGCTTTTACGAGCAAGCCAAAGAGCAGAGAGGGGTTGGAGAAAAAGGGGCTGTGATCAGTATCCATTTCATATACGATTTCGGGTAGCCATTCCCTTATCATCGCCTCTTGTTGCTCTGGTTTTATTACTCGATCGTACGTTGTTCTTATATACACTCGTTTCACCCTATCCAGCTCGCCGTTCTCCTCCCTAAACCGAGCGGTCCTTAATGCGAGGATTGGCCCTGGCCTCAATAGCATGGAGGCCAGTGTCGAATCCTGAGAATCATTGATAACATCAAAACACCGGGTATCATGATGGAGGTTAGATACAATTGCTTCTTAATTCATGGTATGTTTGTTTGGGATGGCATGTTCAAAATCAAATCAATTTTGGCAGCGTAAGATCAAATATTAAATACATTTTGACTGGTCAAAGGATTTTAAATGTTTTAGAACACTTTCAGGCATGTTTTTAGGATCAAATGCAATTATATTAAAAATCTCAAGGCAGGAAAGGATCTCGTGGTTGGATTGGGGATGATTCCAAAACTAAGAAACTATTTTACTTTATTATTATTTTTATTTTTGTGGGTTTAGGTACCTCGTGGGGACTCATGTGATAGATGATCTTTCGCTGGAGTTCCCTTTTGACGACAGCAGTGGTCGGAGGTTGTTGGGGTCCTTGTCCAAATCCTACGTCGTAAGCATCCCCAAACTCGGATAAATCTGGCACTCCCTGCACATTTGACCAAAACAAAAACAAAAGGTAATAATCATAACGGAAATGGTTAACTCGTTAATAATGACCTAATCATCTTAATCTTATATTATATAAT TGAACCTAAAAAAAAATTGGAAGAGTCTCTAATTTTTTATTTAGTGGATCGACATCCGATCGTTACAGATGGAGGTTGATCTGTATTCTGATCCCTCGCCGCAAAAATTGGCTTGTTCTTCTCGATAATTTTCCCTCTGCTCTCACATTCTTTGTTCTCCTTCAACCAATGCATTTCAGCCTTAATTAGAAGTTTTTTTCTCGAAATTTTCGTTTTCGTCTTCGTCCTCTTCCTTCTCTAGGCGCTGCTTCTCCTGAAATCTCAGGATCGGCTTCAATGATGAGTTGTACAAGATGCTGAATCAACGCTATCCCAAGGGCTAGAACAAAAATGACAATTGCACAAAGCAAAAGGAAAAAGAAGTTCAAAATAGAGTATCGTGAAAACTTGAGCAAAGTGTGTCCTGTTTGGAAACGACCTTAATTTTTTCAGACAGAGATTCGATTTTGCATTTTCAATGGGAAGCTGCTGGACTAAGCTTTTCAATAGCGATCAGAAAGACAATGCCGTCAAGGAGCAAGTTGATAGCAAAAACGTACACCTCATTACGTCGATTGAGAAGTGGGAGGCGAAGCTTTCGGAAGCAACTAAAGATGGCAAAATTGTTGTTGCAAATTTCAGTGCACCATGGTGTAGACCTTGTAAATCCATGACACCAGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGACGTCGATGAGCTAGCTGAGCTCAGTAAATCGTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAATAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAGCTGCCATGGACGAGGCTTGATACTTTTTCTTCCCCATTTACTGATACATAATAGAACACCGAAAGCACAATACAAATTCCCATAACAAAACAACAAGGAAAACAAAAACAAAAAAACAAAAAAAAAGTGCATTAGAGGGAGGAATTCTTTTGTGCTTTCTTACCCAATTTCAGTGAGAAATTCGTTCCATGCTCAGAGGATAAGTCATCATTCGTTATGGTTCCTTGCTTGCAAGAGAACACGATGTACTGCTGTCAAATGCACAATTTGAAACAATTACGAAGCACTATATAATTGTAGTTTTATTGTTGAATCACAAGAATTTTCAGATGTTCTTATTTTAGCATAAGAGAGAGAAAGAGTGTGAAAATGAAAAATGCCCTCTCCCTCCCCTTGTTTAGTTACATGCCGCCGTTGAGGAGGCGGCAGCAGCTGCAGCAGCTTTTACGAGCAAGCCAAAGAGCAGAGAGGGGTTGGAGAAAAAGGGGCTGTGATCAGTATCCATTTCATATACGATTTCGGGTAGCCATTCCCTTATCATCGCCTCTTGTTGCTCTGGTTTTATTACTCGATCGTACGTTGTTCTTATATACACTCGTTTCACCCTATCCAGCTCGCCGTTCTCCTCCCTAAACCGAGCGGTCCTTAATGCGAGGATTGGCCCTGGCCTCAATAGCATGGAGGCCAGTGTCGAATCCTGAGAATCATTGATAACATCAAAACACCGGGTATCATGATGGAGGTTAGATACAATTGCTTCTTAATTCATGGTATGTTTGTTTGGGATGGCATGTTCAAAATCAAATCAATTTTGGCAGCGTAAGATCAAATATTAAATACATTTTGACTGGTCAAAGGATTTTAAATGTTTTAGAACACTTTCAGGCATGTTTTTAGGATCAAATGCAATTATATTAAAAATCTCAAGGCAGGAAAGGATCTCGTGGTTGGATTGGGGATGATTCCAAAACTAAGAAACTATTTTACTTTATTATTATTTTTATTTTTGTGGGTTTAGGTACCTCGTGGGGACTCATGTGATAGATGATCTTTCGCTGGAGTTCCCTTTTGACGACAGCAGTGGTCGGAGGTTGTTGGGGTCCTTGTCCAAATCCTACGTCGTAAGCATCCCCAAACTCGGATAAATCTGGCACTCCCTGCACATTTGACCAAAACAAAAACAAAAGGTAATAATCATAACGGAAATGGTTAACTCGTTAATAATGACCTAATCATCTTAATCTTATATTATATAAT ATGGGAAGCTGCTGGACTAAGCTTTTCAATAGCGATCAGAAAGACAATGCCGTCAAGGAGCAAGTTGATAGCAAAAACGTACACCTCATTACGTCGATTGAGAAGTGGGAGGCGAAGCTTTCGGAAGCAACTAAAGATGGCAAAATTGTTGTTGCAAATTTCAGTGCACCATGGTGTAGACCTTGTAAATCCATGACACCAGCATTTTGTGAGCTTGCTGATAAGTATACTTCCATGGTATTTTTGGCCATTGACGTCGATGAGCTAGCTGAGCTCAGTAAATCGTGGGACATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAATAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAGCTGCCATGGACGAGGCTTGA MGSCWTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKSMTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDLQQKIAAMDEA Homology
BLAST of Cp4.1LG13g07810 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 5.1e-37 Identity = 73/131 (55.73%), Postives = 98/131 (74.81%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 3.3e-36 Identity = 71/131 (54.20%), Postives = 98/131 (74.81%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.4e-34 Identity = 67/134 (50.00%), Postives = 94/134 (70.15%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. ExPASy Swiss-Prot
Match: Q9LXZ8 (Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2) HSP 1 Score: 144.8 bits (364), Expect = 6.9e-34 Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.2e-32 Identity = 66/131 (50.38%), Postives = 90/131 (68.70%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. NCBI nr
Match: XP_022939124.1 (thioredoxin H-type-like [Cucurbita moschata] >XP_022993027.1 thioredoxin H-type-like [Cucurbita maxima] >XP_022993028.1 thioredoxin H-type-like [Cucurbita maxima] >XP_023551106.1 thioredoxin H-type-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551107.1 thioredoxin H-type-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6578492.1 hypothetical protein SDJN03_22940, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016057.1 hypothetical protein SDJN02_21161 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 274 bits (701), Expect = 6.42e-93 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. NCBI nr
Match: XP_023551108.1 (thioredoxin H-type-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 257 bits (656), Expect = 3.84e-86 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. NCBI nr
Match: XP_038890472.1 (thioredoxin H4-1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 246 bits (629), Expect = 7.53e-82 Identity = 118/134 (88.06%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. NCBI nr
Match: XP_004141512.2 (thioredoxin H4-1 isoform X1 [Cucumis sativus] >KGN52589.1 hypothetical protein Csa_008226 [Cucumis sativus]) HSP 1 Score: 244 bits (622), Expect = 9.73e-81 Identity = 117/134 (87.31%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. NCBI nr
Match: XP_008459484.1 (PREDICTED: thioredoxin H-type [Cucumis melo]) HSP 1 Score: 241 bits (616), Expect = 8.00e-80 Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. ExPASy TrEMBL
Match: A0A6J1JRL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1) HSP 1 Score: 274 bits (701), Expect = 3.11e-93 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. ExPASy TrEMBL
Match: A0A6J1FG71 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111445124 PE=4 SV=1) HSP 1 Score: 274 bits (701), Expect = 3.11e-93 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. ExPASy TrEMBL
Match: A0A0A0KUM3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140 PE=4 SV=1) HSP 1 Score: 244 bits (622), Expect = 4.71e-81 Identity = 117/134 (87.31%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. ExPASy TrEMBL
Match: A0A1S3CBI4 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1) HSP 1 Score: 241 bits (616), Expect = 3.87e-80 Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. ExPASy TrEMBL
Match: A0A6J1JH67 (thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1) HSP 1 Score: 238 bits (608), Expect = 6.42e-79 Identity = 114/134 (85.07%), Postives = 125/134 (93.28%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 ) HSP 1 Score: 152.5 bits (384), Expect = 2.4e-37 Identity = 71/131 (54.20%), Postives = 98/131 (74.81%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 ) HSP 1 Score: 152.5 bits (384), Expect = 2.4e-37 Identity = 71/131 (54.20%), Postives = 98/131 (74.81%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein ) HSP 1 Score: 144.8 bits (364), Expect = 4.9e-35 Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 ) HSP 1 Score: 133.3 bits (334), Expect = 1.5e-31 Identity = 59/104 (56.73%), Postives = 78/104 (75.00%), Query Frame = 0
BLAST of Cp4.1LG13g07810 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin ) HSP 1 Score: 103.2 bits (256), Expect = 1.6e-22 Identity = 44/118 (37.29%), Postives = 77/118 (65.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|