Cp4.1LG13g07450 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGGGTAGGTGTTCAGAATGCACATGATTGGAATTTATAATTAAAACCCAACAAAATTGAGAAGGAAAGAGTGTATTTATGGAAGCATCTAGGGTTTGGTATGAGGAGAGAGAAAGTTAGGTTTGGGGAATGAGGAGAGAGAAGAAGGTGGCGAATTGTGAGGCTGAAAAAAGGGGTCAAACAAGGAGGGATGGTGCTATGTTTGCTTGCAGTCTAAGGATACCATTTTATTTTATTCACACTCTTCTCTCCTAAGTCCTAATATGCATTTAGTATCAATAGTTTATGTAAGCTTTCCTCTTTCCCTCACTTTCACCACCCACTTTGACACAACCCTCCTCAAATTCACACACCCAACTAAATCAATCTCTTCCAATTCAAAGTTTAGCTATTCGAACCGATTAAGCGTACTGCTAGTAGATATTGTTGGCTTTGGCTTGATATGTATCGTTGTCAGCCTCAGTTTTAAAACGCGTCGGTTAGAAAGAGGTTTCTACTCTATTATAAGGAATGCTTCATTATCCTCTCCAACCGATATGAAATCCCATAATCCACTCCTTTGGTGCCTAATGTCATCGCTGGCACACTGCTTGATGACTGGCTCTGATACTATTTGTAACGTCCAAGCTCACTGCTAGAAGATACTGTATGTTTTGGCCCAATACGTATCATCGTCATTCTCATAGTTTTAAAACGCGTCTATTAAGGAGAGTCTTCAATACCCTTATAAGTAAAGTAATGTTTCATGAAATCTCATAATCCACTCCCTTGGGGGCCCAACGTCCTCGCTGGTACACTGCTCGATGTCTAGCTGTGTAACGACCCAAGCCCAAGCCCACCGCTAATAGATATTGTCCTCTTTTTGCACCATTCTAAAGGGGGTTTTGTTCTCCTCCTCAACCAATGTGGGACATCACAGGTTCTGATACCATTTGTAACCGTCCAAGCCCACTGGTAGCATATATTGTTCACTTTTGCCTAATACGTATCGTTTTCAGCCTCACAGTTTTAAAACACATCCGTTAGAGAGAAGTTTCTATAATTTTGTAAAGAATATTTCGTTCTCCTCTTCAATCCAACCAATGTAGGATCTGACACGTATCCATTACGAAGCAAAAGGGTGTTGAGTCATTTTCTGAGTGAGAAATGTTGAGTGTTTTAGTGAACGATGTGTTGTGGATAGTCACCAACAATCACAGCTACATCACTTACATTATTATTATCAAAACCTTGAAGGCAACCCATTTGTTGTAGGATTCTGATTTTGACATGAAACTACTACCAACCTAATTTCTACTCGGTTCGAAACCTTTCAAACTTGGATACAATTTACATTGTTTATACCATAAATCATCATTATAATTATACATATACATTGACATGTTTCCCAGCTATTATCTTCCAGAAACAAATCAAAAATAATGTTCACATGGATCCAAAGTCAAAATGCATTTAAGAACCCACACGTGAGGCTGCAGTCCTATCATATTTATAACTCACCCCCTCTTCTTCTTCTCCTTCTTCTCCTCAGCTAATTCTCTTTCCTTCCTTTTAAGCAAACCCTTGTTCTTGTTCTTGTTCTTCGATTCGGGTTCGATTCGGGTATGCCTGAATGTCAAGAGAAAGGTGAGTAAGTATGAAAATGATATGCCTAAATGCTTGTTTTTGTTAATGATTTGGGGTTTGTTTTGGCAGAGAATTGCAGGAGGTTGATGAGATAAAGAGGGAGGTGGTTGAAGGGTTTTATCCATTAATGGGAAGAAGGCAGATATTGAGTCAAGCTGGGGCGTTGAATACCATAACGCCATGTGCGGCCTGTAAGCTATTAAGAAGAAGGTGCGCTCAAGAATGCCCATTTTCTCCATATTTCTCTCCCCATGAACCCCACAAGTTTGCTTCGGTCCATAAGGTTTTTGGTGCCAGCAACGTGGCTAAGATGCTCATGGTAAGCATCAACCCTCACTCTTCATTTTTCTTGTTCAAAGGGATGTGCTTAGATCCATTGAGGCCTATATTAAATTAATAAAAATAGATCTCGGTTTTCAATTTCATATTAATTATATTTTTGTCTACCTAATATTATAAAATACATAAACACATATGGTACATCTCTAATTTTGTCTACCTAAGTTTACTACTATATTTTATAAATTTTTTAATCAACCCTCAATTATTGTATCTATTATTACCTTAGCTCAAATTAGAGATGTCCACTCCGCCGAGGAAGTGGACAGGGGCGGGGTGGGGGAAGCCTTCTCCGTCCCTATCCCAGTCACCTATTGTAACGACCCAGGCCTACCGCTAGCAAATATTGTCCTCTTTGGGCTTCTTCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTACTACGGGAAGGTTTCCACACCCTTGTAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTAGGACATCACAATCCACCCCCTTCTGGGCCCCAGTGTCCTCGCTGGCACTCTTTCCTTCCTCCAATCGATGTGGGATCCCCCCCAAATCCACCCCCTTTGAGGCCAGCGTCCTTACTAGCACACCGTCTCGTGTCTACCCCCTTTCGGGGAACAGCGAGAAGACTGACACAGCGTTTTAAAGCCATGAGAGGAAGCCCGAAATGGAGGTTTCCCCTAGAGGACAATATCTACTAGCGGTGGGCCTAGGTCGTTACACCAATTTCATTTTCTATTCCCGCAAAATTTCTCAATTATTTTTGCGGGGACTGAGTCGGAGATTCCCCACGAAGAATTTGTTGGGAATGGAATTCCCTCTTAAGTCATTTATTATTCTTTTTAAAAATATATAATTATTTTAAAATTTTTATTCAAATAAATTAGGAAAGAATCCTAATAAATAGATATATTTGATAAGCAAACGCATGTATTTATATGACAATTAGGGTTTCAAAATTAACTAATATAACCGAAAATGTATTTATATGAGGTGGGTCGGTGAATTGAGCATAGATCGGGACAAAAAATATAATCTTGTCTGCACGGTTCGAATTTGATGTTGAATTTGTGAAAATTTGTAGGAAGTGCCGGAGAGTCAAAGAGCGGACGCCGCAAACAGCCTAGTGTATGAAGCCAATCTGAGGCTGAGGGATCCAGTGTACGGCTGCATGGGCGCCATTTCTGCTCTCCAACACCAACTTCAAACCTTACAAGCTGACCTCAACGCTATAAGAACTGAGATTTTGAAGTACAAATATAGAGAAGCCATCATCCCTTCTCCTTCCTCCTCTTCCTCTTCCCACATCGCTTTCATTTCCGCTACCGGGCTCGTATCCACCACCGCAACCCCGCCTACTGCCCCGCCAACTCCGCCGCCTTCTCAGCCACCTCCGCTCTCTCTTCCCCCGCCTCTTCCTCCCTCCTCCTCCTCCTCCTCCATCTTTTCTCCGCCCATCAGCACCACCACTGCCCCTCAACTAATTAACCCTATCTCAACCCAACATATTCCTTACTTTGGTTGA ATGGACGGAGAATTGCAGGAGGTTGATGAGATAAAGAGGGAGGTGGTTGAAGGGTTTTATCCATTAATGGGAAGAAGGCAGATATTGAGTCAAGCTGGGGCGTTGAATACCATAACGCCATGTGCGGCCTGTAAGCTATTAAGAAGAAGGTGCGCTCAAGAATGCCCATTTTCTCCATATTTCTCTCCCCATGAACCCCACAAGTTTGCTTCGGTCCATAAGGTTTTTGGTGCCAGCAACGTGGCTAAGATGCTCATGGAAGTGCCGGAGAGTCAAAGAGCGGACGCCGCAAACAGCCTAGTGTATGAAGCCAATCTGAGGCTGAGGGATCCAGTGTACGGCTGCATGGGCGCCATTTCTGCTCTCCAACACCAACTTCAAACCTTACAAGCTGACCTCAACGCTATAAGAACTGAGATTTTGAAGTACAAATATAGAGAAGCCATCATCCCTTCTCCTTCCTCCTCTTCCTCTTCCCACATCGCTTTCATTTCCGCTACCGGGCTCGTATCCACCACCGCAACCCCGCCTACTGCCCCGCCAACTCCGCCGCCTTCTCAGCCACCTCCGCTCTCTCTTCCCCCGCCTCTTCCTCCCTCCTCCTCCTCCTCCTCCATCTTTTCTCCGCCCATCAGCACCACCACTGCCCCTCAACTAATTAACCCTATCTCAACCCAACATATTCCTTACTTTGGTTGA ATGGACGGAGAATTGCAGGAGGTTGATGAGATAAAGAGGGAGGTGGTTGAAGGGTTTTATCCATTAATGGGAAGAAGGCAGATATTGAGTCAAGCTGGGGCGTTGAATACCATAACGCCATGTGCGGCCTGTAAGCTATTAAGAAGAAGGTGCGCTCAAGAATGCCCATTTTCTCCATATTTCTCTCCCCATGAACCCCACAAGTTTGCTTCGGTCCATAAGGTTTTTGGTGCCAGCAACGTGGCTAAGATGCTCATGGAAGTGCCGGAGAGTCAAAGAGCGGACGCCGCAAACAGCCTAGTGTATGAAGCCAATCTGAGGCTGAGGGATCCAGTGTACGGCTGCATGGGCGCCATTTCTGCTCTCCAACACCAACTTCAAACCTTACAAGCTGACCTCAACGCTATAAGAACTGAGATTTTGAAGTACAAATATAGAGAAGCCATCATCCCTTCTCCTTCCTCCTCTTCCTCTTCCCACATCGCTTTCATTTCCGCTACCGGGCTCGTATCCACCACCGCAACCCCGCCTACTGCCCCGCCAACTCCGCCGCCTTCTCAGCCACCTCCGCTCTCTCTTCCCCCGCCTCTTCCTCCCTCCTCCTCCTCCTCCTCCATCTTTTCTCCGCCCATCAGCACCACCACTGCCCCTCAACTAATTAACCCTATCTCAACCCAACATATTCCTTACTTTGGTTGA MDGELQEVDEIKREVVEGFYPLMGRRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYKYREAIIPSPSSSSSSHIAFISATGLVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSSSSSIFSPPISTTTAPQLINPISTQHIPYFG Homology
BLAST of Cp4.1LG13g07450 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2) HSP 1 Score: 228.8 bits (582), Expect = 6.3e-59 Identity = 134/202 (66.34%), Postives = 151/202 (74.75%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. ExPASy Swiss-Prot
Match: Q9AT61 (LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 SV=2) HSP 1 Score: 209.9 bits (533), Expect = 3.0e-53 Identity = 124/222 (55.86%), Postives = 154/222 (69.37%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 5.8e-36 Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 151.4 bits (381), Expect = 1.3e-35 Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.7e-35 Identity = 77/128 (60.16%), Postives = 95/128 (74.22%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. NCBI nr
Match: XP_023551227.1 (LOB domain-containing protein 15-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 434 bits (1117), Expect = 4.35e-153 Identity = 229/231 (99.13%), Postives = 230/231 (99.57%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. NCBI nr
Match: XP_022939235.1 (LOB domain-containing protein 15-like [Cucurbita moschata] >XP_022993125.1 LOB domain-containing protein 15-like [Cucurbita maxima]) HSP 1 Score: 429 bits (1102), Expect = 8.11e-151 Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. NCBI nr
Match: KAG7016037.1 (LOB domain-containing protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 427 bits (1098), Expect = 3.19e-150 Identity = 227/231 (98.27%), Postives = 228/231 (98.70%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. NCBI nr
Match: KAG6578472.1 (LOB domain-containing protein 15, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 427 bits (1098), Expect = 3.30e-150 Identity = 227/231 (98.27%), Postives = 229/231 (99.13%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. NCBI nr
Match: XP_038886350.1 (LOB domain-containing protein 15-like [Benincasa hispida]) HSP 1 Score: 307 bits (787), Expect = 8.17e-103 Identity = 182/240 (75.83%), Postives = 192/240 (80.00%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. ExPASy TrEMBL
Match: A0A6J1JXN5 (LOB domain-containing protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC111489239 PE=3 SV=1) HSP 1 Score: 429 bits (1102), Expect = 3.93e-151 Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. ExPASy TrEMBL
Match: A0A6J1FM44 (LOB domain-containing protein 15-like OS=Cucurbita moschata OX=3662 GN=LOC111445211 PE=3 SV=1) HSP 1 Score: 429 bits (1102), Expect = 3.93e-151 Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. ExPASy TrEMBL
Match: A0A6J1BWY3 (LOB domain-containing protein 15-like OS=Momordica charantia OX=3673 GN=LOC111006433 PE=3 SV=1) HSP 1 Score: 298 bits (762), Expect = 1.35e-99 Identity = 170/210 (80.95%), Postives = 180/210 (85.71%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. ExPASy TrEMBL
Match: A0A1S3C3L1 (LOB domain-containing protein 15-like OS=Cucumis melo OX=3656 GN=LOC103496607 PE=3 SV=1) HSP 1 Score: 293 bits (750), Expect = 3.19e-97 Identity = 183/260 (70.38%), Postives = 194/260 (74.62%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. ExPASy TrEMBL
Match: A0A0A0K8P6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013950 PE=3 SV=1) HSP 1 Score: 293 bits (749), Expect = 4.68e-97 Identity = 182/261 (69.73%), Postives = 195/261 (74.71%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 ) HSP 1 Score: 228.8 bits (582), Expect = 4.5e-60 Identity = 134/202 (66.34%), Postives = 151/202 (74.75%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. TAIR 10
Match: AT2G30340.1 (LOB domain-containing protein 13 ) HSP 1 Score: 209.9 bits (533), Expect = 2.2e-54 Identity = 124/222 (55.86%), Postives = 154/222 (69.37%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 152.5 bits (384), Expect = 4.1e-37 Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 152.5 bits (384), Expect = 4.1e-37 Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Cp4.1LG13g07450 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 152.5 bits (384), Expect = 4.1e-37 Identity = 70/109 (64.22%), Postives = 87/109 (79.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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