Cp4.1LG13g06620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

BLAST of Cp4.1LG13g06620 vs. ExPASy Swiss-Prot
Match: Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1222.6 bits (3162), Expect = 0.0e+00
Identity = 630/1104 (57.07%), Postives = 799/1104 (72.37%), Query Frame = 0

Query: 7    MGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRFTSKLGG 66
            MGKTI++FGFP  V+A+EVK+F+E  TG GTV  +++ +P     R  +A V+FTS+   
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPR-VYAIVQFTSERHT 60

Query: 67   EYVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNLVSKEEM 126
              ++   AA +RL++G  YLKA +VE++I     A +H     +  + + +G  VS ++ 
Sbjct: 61   RLII--TAAAERLYYGRSYLKAFEVEQDIVPKPRASLH----TISGLKMFFGCQVSTKKF 120

Query: 127  KVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENI-----------------LGL 186
              +W  +   V +GIG+RKL F  S+   +Y++EL +ENI                 + +
Sbjct: 121  LTLWSAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQV 180

Query: 187  QGAPRIFKK--APLSSSSRLSSEESTGF--RWIRDVDFTPSSCIGQSFALCLELSHGDQL 246
             GAP+IF+K   P++    +    S G   +WIR  DFT SSCIGQS A CLEL     +
Sbjct: 181  IGAPKIFEKEDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNV 240

Query: 247  PSFFQTLVGYKESYA-PFILHTGSSLSSISN-LVPIITPPQGFHISYKILFQINALLQHG 306
            P F +    Y E  A  F++ +GSS SS +N LVP++ PP GF + ++ILF++N L+Q+ 
Sbjct: 241  PDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNA 300

Query: 307  YLPGPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLP 366
             L GPALD +F+RL++  ++    +++ L+KLFHL ECCYEP  WL+ +Y  + S  +LP
Sbjct: 301  CLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLP 360

Query: 367  WKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK 426
              P +SLDDGLVY++RVQ+TP +VYF GPE N+SNRV+RH+   ++NFLRVSFVDE+L+K
Sbjct: 361  LSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEK 420

Query: 427  LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR 486
            + S+DLSPR+S +   RT++YDR+ SVLR+GIVIGDKKFEFLAFS+SQLRENS WMFA  
Sbjct: 421  VRSMDLSPRSSTQR--RTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPI 480

Query: 487  KGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT 546
              ++AA IRAWMGDF  IRNVAKYAARLGQSF SSR TL V   EIEVI DVE+ +    
Sbjct: 481  DRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTR 540

Query: 547  YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML 606
            Y FSDGIGKIS   A KVA KCGL   +PSAFQIRY GYKGVVA+DP S+KKLSLRKSM 
Sbjct: 541  YVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMS 600

Query: 607  KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR 666
            K+ S +T++DVL+WSKYQPC++NRQ+I LLSTLG+ D VF KKQ+E +D+LD+IL  P  
Sbjct: 601  KFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLE 660

Query: 667  ALEVLELMSPGEMTSILKELLLL-YKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGR 726
            A E L LM+PGE T+ILK L+L  YKP+ EPFL+MML+ FRA+KLL+LRTK+RIF+  GR
Sbjct: 661  AHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGR 720

Query: 727  TMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVK 786
            +MMGCLDETRTLEYGQV V  S P R     F++ G VVVAKNPCLHPGDVR+L AV+V 
Sbjct: 721  SMMGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVVVAKNPCLHPGDVRVLQAVNVP 780

Query: 787  ALHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRL 846
            AL+HMVDCVVFPQKG RPHPNECSGSDLDGD+YFV WD EL   +  +PM Y P PT  L
Sbjct: 781  ALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQIL 840

Query: 847  DHDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPK 906
            DHDVT+ EV+EY   Y+VND LG IANAHT FAD++P KA +  CI+LAK FS AVDFPK
Sbjct: 841  DHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPK 900

Query: 907  TGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVAT 966
            TGV A  P +L V+EYPDFMEKPDKPTY S  V+GKLFR VK+ +  + +++ F+ +VA+
Sbjct: 901  TGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVAS 960

Query: 967  KCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKR 1026
            K YD DMEVDGFE+Y+ EAF  KA YDFKLGNLMDYYGIKTE E++SG I+RM+KSF KR
Sbjct: 961  KSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKR 1020

Query: 1027 NDMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYN 1086
             D E I  A+++LRKE  S FN      A +E++N   E AKASAWY VTYH  YWG YN
Sbjct: 1021 RDAESIGRAVRALRKETLSLFN------ASEEEEN---ESAKASAWYHVTYHSSYWGLYN 1080

BLAST of Cp4.1LG13g06620 vs. ExPASy Swiss-Prot
Match: Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 921.4 bits (2380), Expect = 9.7e-267
Identity = 459/734 (62.53%), Postives = 570/734 (77.66%), Query Frame = 0

Query: 367  VYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDKLHSIDLSPRTSAENDL-RTRVYD 426
            VYF GPE N+SNRVVR+F  D++NFLR+SFVDE+ +KL + DLSPR+++ +D  RT +Y 
Sbjct: 9    VYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYK 68

Query: 427  RVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASRKGLSAADIRAWMGDFRQIRNVA 486
            RVLSVL +GI IG K FEFLAFS+SQLR+NS WMFASR+GL+A+DIR WMGDFR IRNVA
Sbjct: 69   RVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVA 128

Query: 487  KYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKITYCFSDGIGKISGTLAEKVAEKC 546
            KYAARLGQSF SS  TL V+++E+E ISD++   N   + FSDGIGKIS   A +VA KC
Sbjct: 129  KYAARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEVAMKC 188

Query: 547  GLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSMLKYTSLDTQVDVLSWSKYQPCFL 606
             L    PSAFQIRY GYKGVVA+DPTS  KLSLRKSMLK+ S +  VDVL++SKYQP FL
Sbjct: 189  NLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFL 248

Query: 607  NRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLL 666
            NRQ+I LLSTLG++D VF +KQ+EA++QL+ ++ DP  A+E +ELM  GE+T+ +KELLL
Sbjct: 249  NRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLL 308

Query: 667  L-YKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCS 726
              Y+P++EP+L+M+L+TFRA+KLL+L+TKSRI +PKGR MMGCLDETRTL+YGQVF+  +
Sbjct: 309  CGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRAT 368

Query: 727  LPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALHHMVDCVVFPQKGERPHPNE 786
              G +    F V GKVV+AKNPCLHPGD+R+L AVDV  LHHM +CVVFPQ+G RPHPNE
Sbjct: 369  -SGVNDNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVVFPQQGPRPHPNE 428

Query: 787  CSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLDHDVTMGEVQEYLVKYMVNDGL 846
            CSGSDLDGD+YFV WDP L   + V PM Y PAPT  LDHDVT+ EV+EY   Y+VN+ L
Sbjct: 429  CSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNESL 488

Query: 847  GGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPKTGVPANFPHNLRVREYPDFMEK 906
            G IANAH VFAD++  KA ++ CI+LAKLFSIAVDFPKTGVPA  P  L V+EYPDFMEK
Sbjct: 489  GMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPELHVKEYPDFMEK 548

Query: 907  PDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATKCYDPDMEVDGFEDYLSEAFEY 966
             DK TY S GV+GKL+R +K        ++ F+REVA + YD DM VDG+EDY++EA   
Sbjct: 549  LDKVTYESKGVIGKLYREIK---KHTPHIKHFTREVARRSYDTDMIVDGYEDYITEAMAL 608

Query: 967  KARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRNDMEQISLAMKSLRKEARSWFN 1026
            K  YDFKLGNLMD+YGIK+E E+ISG IL+MAK+F K++D + I LA++SLRKEARS F+
Sbjct: 609  KDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRSLRKEARSRFS 668

Query: 1027 EKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNEGMQRDHFLSFPWCVSDKLIQI 1086
            E    S  D     D   AKASAWY VTYHP++WG YNEG +R HF+SFPWC+ +KL++I
Sbjct: 669  E---MSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCIYEKLLRI 728

Query: 1087 KREKTCLVNFSPVL 1099
            K+ +  +    P L
Sbjct: 729  KQRRKFVRKMQPEL 732

BLAST of Cp4.1LG13g06620 vs. ExPASy Swiss-Prot
Match: O82504 (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)

HSP 1 Score: 749.2 bits (1933), Expect = 6.6e-215
Identity = 453/1142 (39.67%), Postives = 652/1142 (57.09%), Query Frame = 0

Query: 1    MATTNDMGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60
            ++ T     T++I   P  + ADE+  F+E H G+ TV  + I    D      FA V+F
Sbjct: 2    VSETTTNRSTVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQF 61

Query: 61   TSKLGGEYVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNL 120
            T+ L  +      +++ +L F +  L+  +   +I      R     +R++++ +  G  
Sbjct: 62   TT-LEVKSRAQLLSSQSKLLFKTHNLRLSEAYDDI----IPRPVDPRKRLDDIVLTVGFP 121

Query: 121  VSKEEMKVIWKGEKW-SVEYGI--GVRKLGFYLSYEGVEYKMELCFENI----------- 180
             S E  K     EKW  V   I    R++ F++   G  YK+E+ FE+I           
Sbjct: 122  ESDE--KRFCALEKWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGD 181

Query: 181  --------LGLQGAPRIFKKAPLSSSSRLSSE------ESTGFRWIRDVDFTPSSCIGQS 240
                    L L+  P++FK+  +  +++  S+      E   F WIR  DF+ S  IG S
Sbjct: 182  ASEIDAFLLKLKYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTS 241

Query: 241  FALCLELSHGDQLPSFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPP-QGFHISYK 300
               CLE+ +G  +   F  L  Y+E         G + +S + +VP++     G    Y+
Sbjct: 242  TCFCLEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYE 301

Query: 301  ILFQINALLQHGYLP-GPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLK 360
            ILFQ+NAL+    +    A D E  +++      +  V   L KL      CY+P  ++K
Sbjct: 302  ILFQLNALVHAQKISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVK 361

Query: 361  QQYLSFYSS-KQLPWKPNVSL-DDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDV 420
             Q  S     K  P      L +  ++   R  +TP+K+Y  GPE   +N VV++F + V
Sbjct: 362  TQMQSVVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHV 421

Query: 421  DNFLRVSFVDEELDKLHSIDLSPRTSA---ENDLRTRVYDRVLSVLRNGIVIGDKKFEFL 480
             +F+RV+FV+E+  KL +  LS  +         RT +Y+RVLS+L  GI +G K+FEFL
Sbjct: 422  SDFMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFL 481

Query: 481  AFSASQLRENSCWMFASRKGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVE 540
            AFSASQLR NS WMFAS + + A DIR WMG FR+IR+++K AAR+GQ F +SR+TL V 
Sbjct: 482  AFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVR 541

Query: 541  QHEIEVISDVEVETNKITYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGV 600
              ++E I D+EV T+   YCFSDGIGKIS   A++VA+KCGL SH PSAFQIRY GYKGV
Sbjct: 542  AQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGV 601

Query: 601  VAIDPTSTKKLSLRKSMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVK 660
            +A+D +S +KLSLR SMLK+ S +  ++V  W++  PCFLNR++I LLSTLGI+D +F  
Sbjct: 602  IAVDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEA 661

Query: 661  KQKEAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLLL-YKPNEEPFLNMMLRTFRA 720
             Q   +  L ++LED   AL VL+ +S     ++L ++LL  Y P+ EP+L+MMLR    
Sbjct: 662  MQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHE 721

Query: 721  AKLLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSLP------------GRSSES 780
            ++L +L+++ RI VPKGR ++GC+DE   LEYGQV+V  +L              +  E 
Sbjct: 722  SQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEE 781

Query: 781  NFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALHH--MVDCVVFPQKGERPHPNECSGSDL 840
              VV GKVVV KNPCLHPGD+R+LDA+          +DC++FPQKGERPHPNECSG DL
Sbjct: 782  TSVVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDL 841

Query: 841  DGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLDHDVTMGEVQEYLVKYMVNDGLGGIANA 900
            DGD +FV WD ++   +   PM Y  +    +DHDVT+ E+ ++ V YM++D LG I+ A
Sbjct: 842  DGDQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTA 901

Query: 901  HTVFADQKPKKAMTAECIKLAKLFSIAVDFPKTGVPANFPHNLRVREYPDFMEKPDKPTY 960
            H V AD+ P+KA + +C++LA L S AVDF KTG PA  P+ L+ RE+PDF+E+ +KPTY
Sbjct: 902  HLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTY 961

Query: 961  VSNGVLGKLFRGVKDVSSDVNTVEIFSREVATKCYDPDMEVDGFEDYLSEAFEYKARYDF 1020
            +S  V GKL+R VK   S +   +  +    T  YD  +E  GFE ++  A  ++  Y  
Sbjct: 962  ISESVFGKLYRAVK---SSLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGE 1021

Query: 1021 KLGNLMDYYGIKTEPELISGNI----LRMAKSFDKRNDM-EQISLAMKSLRKEARSWFNE 1080
            KL +LM YYG   E E+++G +    + +A+   +  DM ++I+L++K L KEA  WF  
Sbjct: 1022 KLTSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWF-- 1081

Query: 1081 KGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNEGMQRDHFLSFPWCVSDKLIQIK 1088
               KS  DE   K      ASAWY VTY+P      N   ++  FLSFPW V D L+ IK
Sbjct: 1082 --EKSCEDEQQKK----KLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIK 1116

BLAST of Cp4.1LG13g06620 vs. ExPASy Swiss-Prot
Match: Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 1.2e-208
Identity = 411/994 (41.35%), Postives = 594/994 (59.76%), Query Frame = 0

Query: 142  GVRKLGFYLSYEGVEYKMELCFEN---------------ILGLQGAPRIFK--KAPLSSS 201
            G R++  YL ++   YK+E+ FE+               +L L  APRI      P  +S
Sbjct: 140  GKRRVDLYLEHDSQRYKLEVLFEDMKDCLGCTLDGMGAILLQLNYAPRIHTAISGPAVNS 199

Query: 202  SRL-----SSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGDQLPSFFQTLVGYKESY 261
              +     + +E   F W+R +DFTP+   G+   L L+L     +    ++L  +  + 
Sbjct: 200  RFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALVSDILKSL-PFSGNL 259

Query: 262  APFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHGYLPGPALDNEFFRLVD 321
                +++   + + SN+VP++  P+ + + Y++LF++N+L+  G +    ++ + F+ + 
Sbjct: 260  GELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVAKHVNADLFKAL- 319

Query: 322  PSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLPWKPNVSLDDG---LVY 381
                  D      +K+  L+  CY P ++++Q+  S   S  +    N    +G   L+ 
Sbjct: 320  -QELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNV-LLSNEGEGEGERKLMK 379

Query: 382  VHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDKLHSIDLSPRTSA- 441
             +RV ITP+K++  GPE  ++N VV+H      +F+RV+FVDE+  KL S  +S R    
Sbjct: 380  CYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSNAISARIEQG 439

Query: 442  --ENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASRKGLSAADIRA 501
                  +T +Y R+LS+L+ G  IG K FEFLAFSASQLR NS WMFAS   L+A  IR 
Sbjct: 440  FFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNASLNAGGIRR 499

Query: 502  WMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKITYCFSDGIGKI 561
            WMG F  IR+V+K AAR+GQ F SSR+T  V + ++EVI D+E+ T+   Y FSDGIGKI
Sbjct: 500  WMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEITTDGSKYIFSDGIGKI 559

Query: 562  SGTLAEKVAEKCGL-ISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSMLKYTSLDTQV 621
            S   A++VA   GL  ++ PSAFQIRY GYKGV+AIDP S+  LSLR SM K+ S    +
Sbjct: 560  SLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLSLRPSMKKFESESRML 619

Query: 622  DVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRALEVLELMS 681
            ++ SWSK QPC++NR++I+LLSTLGI+D +FV  Q++ + + + +L +   AL VL  + 
Sbjct: 620  NITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEVALSVLGKLG 679

Query: 682  PGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRTMMGCLDETR 741
              E  + +K LL  Y+P+ EP+L+M+L+  +  +L D+RT+ +I VPKGR ++GCLDET 
Sbjct: 680  GSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGRVLIGCLDETG 739

Query: 742  TLEYGQVFVHCSLPGR----SSESNF--------VVKGKVVVAKNPCLHPGDVRLLDAVD 801
             LEYGQV++  +   +    S++S F         V GKV + KNPCLHPGD+R+L+A+ 
Sbjct: 740  VLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKNPCLHPGDIRVLEAIY 799

Query: 802  VKALHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM 861
               L  MVDC+VFPQ+GERPHPNECSG DLDGDLYF+ WD +L   K   PM Y      
Sbjct: 800  DPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIPEKVDTPMDYTATRPR 859

Query: 862  RLDHDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDF 921
             +DH VT+ E+Q++ V YM+ND LG I+ AH + AD+ P KA + EC++LA L S+AVDF
Sbjct: 860  IMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECLQLATLHSMAVDF 919

Query: 922  PKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFR---GVKDVSSDVNTVEIFS 981
             KTG PA  P  LR REYPDFME+ +KP Y+SNGVLGKL+R   G  + S D   +   S
Sbjct: 920  AKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHMEKSGDSGALSSSS 979

Query: 982  REVATKCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAK 1041
             +  +  YDPD+EV G +++L  A EY   Y+ KL  LM+YY  + E E+++GNI R   
Sbjct: 980  AQ-PSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEILTGNI-RNKM 1039

Query: 1042 SFDKRND------MEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRV 1086
             + KR++       ++I  A+ +L +EAR W       S  +ED ++      ASAWYRV
Sbjct: 1040 LYLKRDNKRYFEMKDRIVAAVDALHREARGWL----LSSRKEEDASR-----MASAWYRV 1099

BLAST of Cp4.1LG13g06620 vs. ExPASy Swiss-Prot
Match: Q8LHH9 (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.0e-162
Identity = 364/943 (38.60%), Postives = 519/943 (55.04%), Query Frame = 0

Query: 197  WIRDVDFTPSSCIGQSFALCLELSHGDQLPSFFQTLVGYKESYAPFILHTGSSLS----- 256
            WIR  D TPS  IG+       +S   +        + Y       I+  G         
Sbjct: 270  WIRTTDITPSGAIGRCGV--YRISFSARFWPKMDRALDYMRERRVAIVDCGGGWGPRRGL 329

Query: 257  SISNLVPIITPPQGFH--------ISYKILFQINALLQHGYLPGPALDNEFFRLVDPSRF 316
            ++ + +    P Q           + + +LF +NAL+  G +    L  EFF L+  S  
Sbjct: 330  TVRDELEFGEPMQDVFFCLQHAEGLKFPLLFMVNALVHKGIINQHQLTPEFFSLLGRSEE 389

Query: 317  RSDYV---EYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLPWKPNVSLDDGLVYVHRV 376
              +     ++  DK F + + C   +K L +         + P      + D    V R+
Sbjct: 390  NVNVAALRDFWGDK-FPVFDACGRLKKALNR-------VARNPKLLCSKVGDDHAEVRRL 449

Query: 377  QITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDKLHSIDLSPRTS-AENDL 436
             ITPT+ Y   PE   SNRV+RH+ +  D FLRV+F+DE +  L++  L+  T+    DL
Sbjct: 450  VITPTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDL 509

Query: 437  -------RTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASRKGLSAADIR 496
                   +T VY RV  +L  G  +  +K+ FLAFS++QLR+ S W FA  +  +   IR
Sbjct: 510  MSNFFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIR 569

Query: 497  AWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKITYCFSDGIGK 556
             WMG F   +NVAK+AAR+GQ F S+  T+ +   E++   D  V      Y FSDGIGK
Sbjct: 570  KWMGRFTS-KNVAKHAARMGQCFSSTYATVTMRPDEVDESFDDVVHNE---YIFSDGIGK 629

Query: 557  ISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAI--DPTSTKKLSLRKSMLKYTSLDT 616
            I+  LA +VAE+  L  + PSA+QIR+AG+KGV+A+        +L LR SM K+ S   
Sbjct: 630  ITPDLALEVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHL 689

Query: 617  QVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRALEVLEL 676
             ++V+SW+K+QP FLNRQ+I LLS+L + D +F + Q+  +  L++IL D   A EVL  
Sbjct: 690  VLEVVSWTKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVLTT 749

Query: 677  MSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRTMMGCLDE 736
                +  +    L   ++P  EP L  ML   R+A+L DL  K+RIFVPKGR +MGCLDE
Sbjct: 750  SCADDGNTAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDE 809

Query: 737  TRTLEYGQVFVHCSLPGRSS-------------ESNFVVKGKVVVAKNPCLHPGDVRLLD 796
               LE GQ F+  ++P  +S             ++  V+ G VV+AKNPCLHPGDVR+L+
Sbjct: 810  LGVLEQGQCFIRATVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILE 869

Query: 797  AVDVKALHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVK----PMS 856
            AVDV  LHH+VDC+VFPQKGERPH NE SGSDLDGDLYFV WD +L  I P K    PM 
Sbjct: 870  AVDVPELHHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKL--IPPGKKSWNPMD 929

Query: 857  YEPAPTMRLDHDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKL 916
            Y P    +L   V+  ++ ++ +K M+++ LG I NAH V AD     AM  +CI LA+L
Sbjct: 930  YSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAEL 989

Query: 917  FSIAVDFPKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTV 976
             + AVDFPKTG  A  P +L+ + YPDFM K D  +Y S  +LG+L+R +++ S+     
Sbjct: 990  AATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSIQEASNG---- 1049

Query: 977  EIFSREVATK---CYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISG 1036
            ++ S+EV T     YD D+EV G  D+L+ A++ K  YD +L  L+  Y ++TE EL++G
Sbjct: 1050 DVVSQEVCTPNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTG 1109

Query: 1037 NILRMAKSFDKRND--MEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEY-AKASA 1086
            +I  + K+  K+     +++  A  +LRKE +S F    S      DD K+  Y  KASA
Sbjct: 1110 HITFLVKNSSKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASA 1169

BLAST of Cp4.1LG13g06620 vs. NCBI nr
Match: XP_023549735.1 (probable RNA-dependent RNA polymerase 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2214 bits (5737), Expect = 0.0
Identity = 1102/1119 (98.48%), Postives = 1102/1119 (98.48%), Query Frame = 0

Query: 1    MATTNDMGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60
            MATTNDMGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF
Sbjct: 1    MATTNDMGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60

Query: 61   TSKLGGEYVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNL 120
            TSKLGGEYVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNL
Sbjct: 61   TSKLGGEYVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNL 120

Query: 121  VSKEEMKVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILG------------ 180
            VSKEEMKVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILG            
Sbjct: 121  VSKEEMKVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILGVQLRCSDDRGSK 180

Query: 181  -----LQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD 240
                 LQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD
Sbjct: 181  HFLIQLQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD 240

Query: 241  QLPSFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHG 300
            QLPSFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHG
Sbjct: 241  QLPSFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHG 300

Query: 301  YLPGPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLP 360
            YLPGPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLP
Sbjct: 301  YLPGPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLP 360

Query: 361  WKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK 420
            WKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK
Sbjct: 361  WKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK 420

Query: 421  LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR 480
            LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR
Sbjct: 421  LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR 480

Query: 481  KGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT 540
            KGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT
Sbjct: 481  KGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT 540

Query: 541  YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML 600
            YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML
Sbjct: 541  YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML 600

Query: 601  KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR 660
            KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR
Sbjct: 601  KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR 660

Query: 661  ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT 720
            ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT
Sbjct: 661  ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT 720

Query: 721  MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA 780
            MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA
Sbjct: 721  MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA 780

Query: 781  LHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLD 840
            LHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLD
Sbjct: 781  LHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLD 840

Query: 841  HDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPKT 900
            HDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPKT
Sbjct: 841  HDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPKT 900

Query: 901  GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK 960
            GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK
Sbjct: 901  GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK 960

Query: 961  CYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN 1020
            CYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN
Sbjct: 961  CYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN 1020

Query: 1021 DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNE 1080
            DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNE
Sbjct: 1021 DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNE 1080

Query: 1081 GMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPVLTFQD 1102
            GMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPVLTFQD
Sbjct: 1081 GMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPVLTFQD 1119

BLAST of Cp4.1LG13g06620 vs. NCBI nr
Match: KAG7016703.1 (RNA-dependent RNA polymerase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2170 bits (5623), Expect = 0.0
Identity = 1076/1102 (97.64%), Postives = 1088/1102 (98.73%), Query Frame = 0

Query: 1    MATTNDMGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60
            MATTNDMGKTIEI+GFPA+VTADEVKEFIENHTGDGTVLTVRISK NDEKARFTFATVRF
Sbjct: 1    MATTNDMGKTIEIYGFPAEVTADEVKEFIENHTGDGTVLTVRISKFNDEKARFTFATVRF 60

Query: 61   TSKLGGEYVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNL 120
            TSKLGGEYVVAQAAAEKRLWFGS YLKARKVEREIKT AAARVHGELERMENVNVQWG+L
Sbjct: 61   TSKLGGEYVVAQAAAEKRLWFGSSYLKARKVEREIKTAAAARVHGELERMENVNVQWGSL 120

Query: 121  VSKEEMKVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILGLQGAPRIFKKAP 180
            VSKE+MKVIWKG KWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILGLQGAPRIFKKAP
Sbjct: 121  VSKEKMKVIWKGGKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILGLQGAPRIFKKAP 180

Query: 181  LSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGDQLPSFFQTLVGYKESYA 240
            LSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGDQLPSFFQTLVGYKESYA
Sbjct: 181  LSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGDQLPSFFQTLVGYKESYA 240

Query: 241  PFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHGYLPGPALDNEFFRLVDP 300
            PFIL TGSSLSSISNLVPIITPPQGF I YKILF+INALLQHGYLPGPALDNEFFRLVD 
Sbjct: 241  PFILQTGSSLSSISNLVPIITPPQGFDIPYKILFKINALLQHGYLPGPALDNEFFRLVDS 300

Query: 301  SRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLPWKPNVSLDDGLVYVHRV 360
            SRFR DYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLPWKPN+SLDDGLVYVHRV
Sbjct: 301  SRFRPDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLPWKPNISLDDGLVYVHRV 360

Query: 361  QITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDKLHSIDLSPRTSAENDLR 420
            QITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDKLHSIDLSPRTSAENDLR
Sbjct: 361  QITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDKLHSIDLSPRTSAENDLR 420

Query: 421  TRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASRKGLSAADIRAWMGDFRQ 480
            TRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASRKGLSAADIR WMGD RQ
Sbjct: 421  TRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASRKGLSAADIREWMGDLRQ 480

Query: 481  IRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKITYCFSDGIGKISGTLAEK 540
            IRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKITYCFSDGIGKISGTLAEK
Sbjct: 481  IRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKITYCFSDGIGKISGTLAEK 540

Query: 541  VAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSMLKYTSLDTQVDVLSWSKY 600
            VAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSMLKYTSLDTQVDVLSWSKY
Sbjct: 541  VAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSMLKYTSLDTQVDVLSWSKY 600

Query: 601  QPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRALEVLELMSPGEMTSIL 660
            QPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRALEVLELMSPGEMTSIL
Sbjct: 601  QPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRALEVLELMSPGEMTSIL 660

Query: 661  KELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVF 720
            KELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVF
Sbjct: 661  KELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVF 720

Query: 721  VHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALHHMVDCVVFPQKGERP 780
            VHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALHHMVDCVVFPQKGERP
Sbjct: 721  VHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALHHMVDCVVFPQKGERP 780

Query: 781  HPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLDHDVTMGEVQEYLVKYMV 840
            HPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM+LDHDVT+ EVQ YLVKYMV
Sbjct: 781  HPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMQLDHDVTIEEVQGYLVKYMV 840

Query: 841  NDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPKTGVPANFPHNLRVREYPD 900
            NDGLGGIANAHTVFAD+KPKKAMTAECIKLAKLFSIAVDFPKTGVPANFPHNLRVREYPD
Sbjct: 841  NDGLGGIANAHTVFADKKPKKAMTAECIKLAKLFSIAVDFPKTGVPANFPHNLRVREYPD 900

Query: 901  FMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATKCYDPDMEVDGFEDYLSE 960
            FMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATKCYDPDMEVDGFEDYLSE
Sbjct: 901  FMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATKCYDPDMEVDGFEDYLSE 960

Query: 961  AFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRNDMEQISLAMKSLRKEAR 1020
            AFE+KARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRNDMEQISLAMKSLRKEAR
Sbjct: 961  AFEFKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRNDMEQISLAMKSLRKEAR 1020

Query: 1021 SWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNEGMQRDHFLSFPWCVSDK 1080
            SWFNEKGSKSAYDEDDNK+EEYAKASAWYRVTYHPDYWGRYNEGMQRDHFLSFPWCVSDK
Sbjct: 1021 SWFNEKGSKSAYDEDDNKNEEYAKASAWYRVTYHPDYWGRYNEGMQRDHFLSFPWCVSDK 1080

Query: 1081 LIQIKREKTCLVNFSPVLTFQD 1102
            LI+IKREKTCLVNFSPVLTF D
Sbjct: 1081 LIRIKREKTCLVNFSPVLTFGD 1102

BLAST of Cp4.1LG13g06620 vs. NCBI nr
Match: XP_022938807.1 (probable RNA-dependent RNA polymerase 1 [Cucurbita moschata])

HSP 1 Score: 2150 bits (5572), Expect = 0.0
Identity = 1073/1119 (95.89%), Postives = 1085/1119 (96.96%), Query Frame = 0

Query: 1    MATTNDMGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60
            MATTNDMGKTIEI+GFP QVTADEVKEFIENHTGDGTVLTVRISK NDEKARFTFATV+F
Sbjct: 1    MATTNDMGKTIEIYGFPTQVTADEVKEFIENHTGDGTVLTVRISKLNDEKARFTFATVQF 60

Query: 61   TSKLGGEYVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNL 120
            TSKLGGEYVVAQAAAEKRLWFGS YLKARKVEREIKT  AARVHGELERMENVNVQWG+L
Sbjct: 61   TSKLGGEYVVAQAAAEKRLWFGSSYLKARKVEREIKT--AARVHGELERMENVNVQWGSL 120

Query: 121  VSKEEMKVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILG------------ 180
            VSKEEMKVIWKG KWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILG            
Sbjct: 121  VSKEEMKVIWKGGKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILGVQLRCSVDRGSK 180

Query: 181  -----LQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD 240
                 LQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD
Sbjct: 181  LFLIQLQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD 240

Query: 241  QLPSFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHG 300
            QLPSFFQTLVGYKESYAPFIL TGSSLSSISNLVPIITPPQGF I YKILF+INALLQHG
Sbjct: 241  QLPSFFQTLVGYKESYAPFILQTGSSLSSISNLVPIITPPQGFDIPYKILFKINALLQHG 300

Query: 301  YLPGPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLP 360
            YLPGPALDNEFFRLVD SRFR DYVEYALDKLFH KECCYEPQKWLKQQYLSFYSSKQLP
Sbjct: 301  YLPGPALDNEFFRLVDSSRFRPDYVEYALDKLFHFKECCYEPQKWLKQQYLSFYSSKQLP 360

Query: 361  WKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK 420
            WKPN+SLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK
Sbjct: 361  WKPNISLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK 420

Query: 421  LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR 480
            LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR
Sbjct: 421  LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR 480

Query: 481  KGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT 540
            KGLSAADIR WMGD RQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT
Sbjct: 481  KGLSAADIREWMGDLRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT 540

Query: 541  YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML 600
            YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML
Sbjct: 541  YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML 600

Query: 601  KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR 660
            KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR
Sbjct: 601  KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR 660

Query: 661  ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT 720
            ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT
Sbjct: 661  ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT 720

Query: 721  MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA 780
            MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA
Sbjct: 721  MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA 780

Query: 781  LHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLD 840
            LHHMVDCVVFPQKG+RPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM+LD
Sbjct: 781  LHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMQLD 840

Query: 841  HDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPKT 900
            HDVT+ EVQ YLVKYMVNDGLGGIANAHTVFAD+KPKKAM AECIKLAKLFSIAVDFPKT
Sbjct: 841  HDVTIEEVQGYLVKYMVNDGLGGIANAHTVFADKKPKKAMAAECIKLAKLFSIAVDFPKT 900

Query: 901  GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK 960
            GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK
Sbjct: 901  GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK 960

Query: 961  CYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN 1020
            CYDPDMEVDGFEDYLSEAFE+KARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN
Sbjct: 961  CYDPDMEVDGFEDYLSEAFEFKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN 1020

Query: 1021 DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNE 1080
            DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNK+EEYAKASAWYRVTYHPDYWGRYNE
Sbjct: 1021 DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKNEEYAKASAWYRVTYHPDYWGRYNE 1080

Query: 1081 GMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPVLTFQD 1102
            GMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPVLTF+D
Sbjct: 1081 GMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPVLTFRD 1117

BLAST of Cp4.1LG13g06620 vs. NCBI nr
Match: KAG6579193.1 (RNA-dependent RNA polymerase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 2140 bits (5545), Expect = 0.0
Identity = 1066/1109 (96.12%), Postives = 1079/1109 (97.29%), Query Frame = 0

Query: 1    MATTNDMGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60
            MATTNDMGKTIEI+GFPA+VTADEVKEFIENHTGDGTVLTVRISK NDEKARFTFATVRF
Sbjct: 1    MATTNDMGKTIEIYGFPAEVTADEVKEFIENHTGDGTVLTVRISKFNDEKARFTFATVRF 60

Query: 61   TSKLGGEYVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNL 120
            TSKLGGEYVVAQAAAEKRLWFGS YLKARKVEREIKT AAARVHGELERMENVNVQWG+L
Sbjct: 61   TSKLGGEYVVAQAAAEKRLWFGSSYLKARKVEREIKTAAAARVHGELERMENVNVQWGSL 120

Query: 121  VSKEEMKVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILG------------ 180
            VSKE+MKVIWKG KWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILG            
Sbjct: 121  VSKEKMKVIWKGGKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILGVQLRCSVDRGSK 180

Query: 181  -----LQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD 240
                 LQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD
Sbjct: 181  LFLIQLQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD 240

Query: 241  QLPSFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHG 300
            QLPSFFQTLVGYKESYAPFIL TGSSLSSISNLVPIITPPQGF I YKILF+INALLQHG
Sbjct: 241  QLPSFFQTLVGYKESYAPFILQTGSSLSSISNLVPIITPPQGFDIPYKILFKINALLQHG 300

Query: 301  YLPGPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLP 360
            YLPGPALDNEFFRLVD SRFR DYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLP
Sbjct: 301  YLPGPALDNEFFRLVDSSRFRPDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLP 360

Query: 361  WKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK 420
            WKPN+SLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK
Sbjct: 361  WKPNISLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK 420

Query: 421  LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR 480
            LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR
Sbjct: 421  LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR 480

Query: 481  KGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT 540
            KGLSAADIR WMGD RQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT
Sbjct: 481  KGLSAADIREWMGDLRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT 540

Query: 541  YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML 600
            YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML
Sbjct: 541  YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML 600

Query: 601  KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR 660
            KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR
Sbjct: 601  KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR 660

Query: 661  ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT 720
            ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT
Sbjct: 661  ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT 720

Query: 721  MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA 780
            MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA
Sbjct: 721  MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA 780

Query: 781  LHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLD 840
            LHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM+LD
Sbjct: 781  LHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMQLD 840

Query: 841  HDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPKT 900
            HDVT+ EVQ YLVKYMVNDGLGGIANAHTVFAD+KPKKAMTAECIKLAKLFSIAVDFPKT
Sbjct: 841  HDVTIEEVQGYLVKYMVNDGLGGIANAHTVFADKKPKKAMTAECIKLAKLFSIAVDFPKT 900

Query: 901  GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK 960
            GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK
Sbjct: 901  GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK 960

Query: 961  CYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN 1020
            CYDPDMEVDGFEDYLSEAFE+KARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN
Sbjct: 961  CYDPDMEVDGFEDYLSEAFEFKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN 1020

Query: 1021 DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNE 1080
            DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNK+EEYAKASAWYRVTYHPDYWGRYNE
Sbjct: 1021 DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKNEEYAKASAWYRVTYHPDYWGRYNE 1080

Query: 1081 GMQRDHFLSFPWCVSDKLIQIKREKTCLV 1092
            GMQRDHFLSFPWCVSDKLI+IKREKTCL+
Sbjct: 1081 GMQRDHFLSFPWCVSDKLIRIKREKTCLI 1109

BLAST of Cp4.1LG13g06620 vs. NCBI nr
Match: XP_022994004.1 (probable RNA-dependent RNA polymerase 1 [Cucurbita maxima])

HSP 1 Score: 2122 bits (5499), Expect = 0.0
Identity = 1061/1122 (94.56%), Postives = 1079/1122 (96.17%), Query Frame = 0

Query: 1    MATTNDMGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60
            MATTNDMGK IEI+GFPA+VTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF
Sbjct: 1    MATTNDMGKMIEIYGFPAEVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60

Query: 61   TSKLGGEYVVAQAAAEKRLWFGSLYLKARKVEREIKTT---AAARVHGELERMENVNVQW 120
            TSKLGGEYVVAQAAAEKRLWFGS YLKARKVEREI+T    AAARVHG LERMENVNVQW
Sbjct: 61   TSKLGGEYVVAQAAAEKRLWFGSSYLKARKVEREIRTATAAAAARVHGGLERMENVNVQW 120

Query: 121  GNLVSKEEMKVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILG--------- 180
            G+LVSKE+MKVIWK  KWSVEYGIG RKLGFYLSYEGVEYKMELCFENILG         
Sbjct: 121  GSLVSKEKMKVIWKEGKWSVEYGIGARKLGFYLSYEGVEYKMELCFENILGVQLRCSGDR 180

Query: 181  --------LQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELS 240
                    LQGAPRIFKK P SSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELS
Sbjct: 181  GSELFLIQLQGAPRIFKKTPSSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELS 240

Query: 241  HGDQLPSFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALL 300
             GDQLPSFF+TLVGYKESYAPFILH GSSLSSISNLVPIITPPQGF ISYKILF+INALL
Sbjct: 241  PGDQLPSFFRTLVGYKESYAPFILHPGSSLSSISNLVPIITPPQGFDISYKILFKINALL 300

Query: 301  QHGYLPGPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSK 360
            QHGYLPGPALDNEFFRLVD SRFR +Y+EYAL+KLFH KECCYEPQKWLKQQYLSFYSSK
Sbjct: 301  QHGYLPGPALDNEFFRLVDSSRFRPEYIEYALEKLFHFKECCYEPQKWLKQQYLSFYSSK 360

Query: 361  QLPWKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEE 420
            QLP KPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEE
Sbjct: 361  QLPCKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEE 420

Query: 421  LDKLHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMF 480
            LDKLHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMF
Sbjct: 421  LDKLHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMF 480

Query: 481  ASRKGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETN 540
            ASRKGLSAADIR WMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVI DVEVETN
Sbjct: 481  ASRKGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVIPDVEVETN 540

Query: 541  KITYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRK 600
            KITYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRK
Sbjct: 541  KITYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRK 600

Query: 601  SMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILED 660
            SMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILED
Sbjct: 601  SMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILED 660

Query: 661  PSRALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPK 720
            PSRALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPK
Sbjct: 661  PSRALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPK 720

Query: 721  GRTMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVD 780
            GRTMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVD
Sbjct: 721  GRTMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVD 780

Query: 781  VKALHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM 840
            VKALHHMV+CVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM
Sbjct: 781  VKALHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM 840

Query: 841  RLDHDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDF 900
            RLDHDVT+ EVQEYL KYMVNDGLGGIANAHTVFAD+KPKKAMTAECIKLAKLFSIAVDF
Sbjct: 841  RLDHDVTIEEVQEYLAKYMVNDGLGGIANAHTVFADKKPKKAMTAECIKLAKLFSIAVDF 900

Query: 901  PKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREV 960
            PKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNT+EIFSREV
Sbjct: 901  PKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTIEIFSREV 960

Query: 961  ATKCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFD 1020
            ATKCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFD
Sbjct: 961  ATKCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFD 1020

Query: 1021 KRNDMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGR 1080
            KRND+EQISLA+KSLRKEARSWFNEKGSKSA DEDD KDEEYAKASAWYRVTYHPDYWGR
Sbjct: 1021 KRNDLEQISLAIKSLRKEARSWFNEKGSKSACDEDD-KDEEYAKASAWYRVTYHPDYWGR 1080

Query: 1081 YNEGMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPVLTFQD 1102
            YNEGMQRDHFLSFPWCVSDKLIQIKREKTCLVN SP+LTF+D
Sbjct: 1081 YNEGMQRDHFLSFPWCVSDKLIQIKREKTCLVNLSPILTFRD 1121

BLAST of Cp4.1LG13g06620 vs. ExPASy TrEMBL
Match: A0A6J1FF44 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111444909 PE=3 SV=1)

HSP 1 Score: 2150 bits (5572), Expect = 0.0
Identity = 1073/1119 (95.89%), Postives = 1085/1119 (96.96%), Query Frame = 0

Query: 1    MATTNDMGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60
            MATTNDMGKTIEI+GFP QVTADEVKEFIENHTGDGTVLTVRISK NDEKARFTFATV+F
Sbjct: 1    MATTNDMGKTIEIYGFPTQVTADEVKEFIENHTGDGTVLTVRISKLNDEKARFTFATVQF 60

Query: 61   TSKLGGEYVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNL 120
            TSKLGGEYVVAQAAAEKRLWFGS YLKARKVEREIKT  AARVHGELERMENVNVQWG+L
Sbjct: 61   TSKLGGEYVVAQAAAEKRLWFGSSYLKARKVEREIKT--AARVHGELERMENVNVQWGSL 120

Query: 121  VSKEEMKVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILG------------ 180
            VSKEEMKVIWKG KWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILG            
Sbjct: 121  VSKEEMKVIWKGGKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILGVQLRCSVDRGSK 180

Query: 181  -----LQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD 240
                 LQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD
Sbjct: 181  LFLIQLQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGD 240

Query: 241  QLPSFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHG 300
            QLPSFFQTLVGYKESYAPFIL TGSSLSSISNLVPIITPPQGF I YKILF+INALLQHG
Sbjct: 241  QLPSFFQTLVGYKESYAPFILQTGSSLSSISNLVPIITPPQGFDIPYKILFKINALLQHG 300

Query: 301  YLPGPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLP 360
            YLPGPALDNEFFRLVD SRFR DYVEYALDKLFH KECCYEPQKWLKQQYLSFYSSKQLP
Sbjct: 301  YLPGPALDNEFFRLVDSSRFRPDYVEYALDKLFHFKECCYEPQKWLKQQYLSFYSSKQLP 360

Query: 361  WKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK 420
            WKPN+SLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK
Sbjct: 361  WKPNISLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK 420

Query: 421  LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR 480
            LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR
Sbjct: 421  LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR 480

Query: 481  KGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT 540
            KGLSAADIR WMGD RQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT
Sbjct: 481  KGLSAADIREWMGDLRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT 540

Query: 541  YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML 600
            YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML
Sbjct: 541  YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML 600

Query: 601  KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR 660
            KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR
Sbjct: 601  KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR 660

Query: 661  ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT 720
            ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT
Sbjct: 661  ALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRT 720

Query: 721  MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA 780
            MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA
Sbjct: 721  MMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKA 780

Query: 781  LHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLD 840
            LHHMVDCVVFPQKG+RPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM+LD
Sbjct: 781  LHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMQLD 840

Query: 841  HDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPKT 900
            HDVT+ EVQ YLVKYMVNDGLGGIANAHTVFAD+KPKKAM AECIKLAKLFSIAVDFPKT
Sbjct: 841  HDVTIEEVQGYLVKYMVNDGLGGIANAHTVFADKKPKKAMAAECIKLAKLFSIAVDFPKT 900

Query: 901  GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK 960
            GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK
Sbjct: 901  GVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATK 960

Query: 961  CYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN 1020
            CYDPDMEVDGFEDYLSEAFE+KARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN
Sbjct: 961  CYDPDMEVDGFEDYLSEAFEFKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRN 1020

Query: 1021 DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNE 1080
            DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNK+EEYAKASAWYRVTYHPDYWGRYNE
Sbjct: 1021 DMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKNEEYAKASAWYRVTYHPDYWGRYNE 1080

Query: 1081 GMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPVLTFQD 1102
            GMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPVLTF+D
Sbjct: 1081 GMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPVLTFRD 1117

BLAST of Cp4.1LG13g06620 vs. ExPASy TrEMBL
Match: A0A6J1K1Q3 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111489826 PE=3 SV=1)

HSP 1 Score: 2122 bits (5499), Expect = 0.0
Identity = 1061/1122 (94.56%), Postives = 1079/1122 (96.17%), Query Frame = 0

Query: 1    MATTNDMGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60
            MATTNDMGK IEI+GFPA+VTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF
Sbjct: 1    MATTNDMGKMIEIYGFPAEVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60

Query: 61   TSKLGGEYVVAQAAAEKRLWFGSLYLKARKVEREIKTT---AAARVHGELERMENVNVQW 120
            TSKLGGEYVVAQAAAEKRLWFGS YLKARKVEREI+T    AAARVHG LERMENVNVQW
Sbjct: 61   TSKLGGEYVVAQAAAEKRLWFGSSYLKARKVEREIRTATAAAAARVHGGLERMENVNVQW 120

Query: 121  GNLVSKEEMKVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILG--------- 180
            G+LVSKE+MKVIWK  KWSVEYGIG RKLGFYLSYEGVEYKMELCFENILG         
Sbjct: 121  GSLVSKEKMKVIWKEGKWSVEYGIGARKLGFYLSYEGVEYKMELCFENILGVQLRCSGDR 180

Query: 181  --------LQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELS 240
                    LQGAPRIFKK P SSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELS
Sbjct: 181  GSELFLIQLQGAPRIFKKTPSSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELS 240

Query: 241  HGDQLPSFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALL 300
             GDQLPSFF+TLVGYKESYAPFILH GSSLSSISNLVPIITPPQGF ISYKILF+INALL
Sbjct: 241  PGDQLPSFFRTLVGYKESYAPFILHPGSSLSSISNLVPIITPPQGFDISYKILFKINALL 300

Query: 301  QHGYLPGPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSK 360
            QHGYLPGPALDNEFFRLVD SRFR +Y+EYAL+KLFH KECCYEPQKWLKQQYLSFYSSK
Sbjct: 301  QHGYLPGPALDNEFFRLVDSSRFRPEYIEYALEKLFHFKECCYEPQKWLKQQYLSFYSSK 360

Query: 361  QLPWKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEE 420
            QLP KPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEE
Sbjct: 361  QLPCKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEE 420

Query: 421  LDKLHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMF 480
            LDKLHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMF
Sbjct: 421  LDKLHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMF 480

Query: 481  ASRKGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETN 540
            ASRKGLSAADIR WMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVI DVEVETN
Sbjct: 481  ASRKGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVIPDVEVETN 540

Query: 541  KITYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRK 600
            KITYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRK
Sbjct: 541  KITYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRK 600

Query: 601  SMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILED 660
            SMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILED
Sbjct: 601  SMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILED 660

Query: 661  PSRALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPK 720
            PSRALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPK
Sbjct: 661  PSRALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPK 720

Query: 721  GRTMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVD 780
            GRTMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVD
Sbjct: 721  GRTMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVD 780

Query: 781  VKALHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM 840
            VKALHHMV+CVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM
Sbjct: 781  VKALHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM 840

Query: 841  RLDHDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDF 900
            RLDHDVT+ EVQEYL KYMVNDGLGGIANAHTVFAD+KPKKAMTAECIKLAKLFSIAVDF
Sbjct: 841  RLDHDVTIEEVQEYLAKYMVNDGLGGIANAHTVFADKKPKKAMTAECIKLAKLFSIAVDF 900

Query: 901  PKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREV 960
            PKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNT+EIFSREV
Sbjct: 901  PKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTIEIFSREV 960

Query: 961  ATKCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFD 1020
            ATKCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFD
Sbjct: 961  ATKCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFD 1020

Query: 1021 KRNDMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGR 1080
            KRND+EQISLA+KSLRKEARSWFNEKGSKSA DEDD KDEEYAKASAWYRVTYHPDYWGR
Sbjct: 1021 KRNDLEQISLAIKSLRKEARSWFNEKGSKSACDEDD-KDEEYAKASAWYRVTYHPDYWGR 1080

Query: 1081 YNEGMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPVLTFQD 1102
            YNEGMQRDHFLSFPWCVSDKLIQIKREKTCLVN SP+LTF+D
Sbjct: 1081 YNEGMQRDHFLSFPWCVSDKLIQIKREKTCLVNLSPILTFRD 1121

BLAST of Cp4.1LG13g06620 vs. ExPASy TrEMBL
Match: A0A6J1JTB1 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111487656 PE=3 SV=1)

HSP 1 Score: 1794 bits (4647), Expect = 0.0
Identity = 893/1111 (80.38%), Postives = 974/1111 (87.67%), Query Frame = 0

Query: 8    GKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRFTSKLGGE 67
            GKTIE+FGF  +V+A EVKEF+ENHTG+GTV  VRISKP D K R TFA V F SK+  E
Sbjct: 5    GKTIEVFGFRREVSAGEVKEFMENHTGEGTVSKVRISKPKDGKGRLTFARVEFRSKVAAE 64

Query: 68   YVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNLVSKEEMK 127
            YVV +A AE+ LWFG  YLKAR VERE++          +ERME V VQ G+++SKEEM+
Sbjct: 65   YVVEKAEAEEGLWFGRWYLKARGVEREMR----------VERMEKVRVQLGSVISKEEMR 124

Query: 128  VIWKGEKWSVEYGIGVRKLGFYLSY--EGVEYKMELCFENILG----------------- 187
            VIW+GE+WSVEYG G+RKL FYLSY  E  +YKMEL FENILG                 
Sbjct: 125  VIWRGEEWSVEYGNGMRKLWFYLSYGVEDDDYKMELRFENILGVQLRCPHNSSSNLFLIQ 184

Query: 188  LQGAPRIFKKAPLSSSS--RLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGDQLP 247
            LQGAPRIFKK P SSSS  +  S+ESTGFRWIRDVDFTPSSCIGQSF+LCLE+S GDQLP
Sbjct: 185  LQGAPRIFKKCPSSSSSSSQFYSKESTGFRWIRDVDFTPSSCIGQSFSLCLEVSPGDQLP 244

Query: 248  SFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHGYLP 307
            SFFQTLVGYKE Y PF L TGS+ SS SNLVPI+TPPQ F I YKILF+INAL+QHGYLP
Sbjct: 245  SFFQTLVGYKEIYGPFKLSTGSAFSSTSNLVPIVTPPQPFDIPYKILFKINALVQHGYLP 304

Query: 308  GPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLPWKP 367
            G ALD++FFRLVDPSRFRSDY+EYAL+KLF LKECCYEPQKWLKQQYLSF SS QLPWK 
Sbjct: 305  GSALDDKFFRLVDPSRFRSDYIEYALEKLFSLKECCYEPQKWLKQQYLSFCSSMQLPWKA 364

Query: 368  NVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDKLHS 427
            N+SLDD LVYVHRVQITP KVYFRGPEANLSNRVVR FIDD+DNFLRVSFVDEELDK+HS
Sbjct: 365  NISLDDSLVYVHRVQITPAKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKIHS 424

Query: 428  IDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASRKGL 487
             DLSPRTS E   RTRVYDR+LSVLRNGIVIG KKFEFLAFSASQLRENS WMFASR+GL
Sbjct: 425  SDLSPRTSTEKIERTRVYDRILSVLRNGIVIGGKKFEFLAFSASQLRENSFWMFASREGL 484

Query: 488  SAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKITYCF 547
            +AADIR WMGDFR+IRNVAKYAARLGQSFGSSR+TLCVE++EIEVI D EVE   I YCF
Sbjct: 485  NAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEENEIEVIPDAEVERKNIKYCF 544

Query: 548  SDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSMLKYT 607
            SDGIGKIS  LAE VAEKCGLISHTPSAFQIRYAGYKGVVA+DPTS KKLSLRKSMLKY 
Sbjct: 545  SDGIGKISEALAEMVAEKCGLISHTPSAFQIRYAGYKGVVAVDPTSKKKLSLRKSMLKYM 604

Query: 608  SLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRALE 667
            SLDTQ+DVLSWSKYQPCFLNRQVINLLSTLGI+D VFVK+QK+A+DQLDSIL DPS+ALE
Sbjct: 605  SLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIRDDVFVKQQKKAVDQLDSILRDPSKALE 664

Query: 668  VLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRTMMG 727
            VLELMSPGEMTS+LK++LL Y P+EEPFLNMMLRTFRA KLLDLRTKSRIFVPKGRTMMG
Sbjct: 665  VLELMSPGEMTSVLKDMLLFYNPHEEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMG 724

Query: 728  CLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALHH 787
            CLDETRTLEYGQVF+HCS+PGRSSESNFVVKGKVVVAKNPCLHPGDVR+LDAVDVK LHH
Sbjct: 725  CLDETRTLEYGQVFIHCSVPGRSSESNFVVKGKVVVAKNPCLHPGDVRVLDAVDVKTLHH 784

Query: 788  MVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLDHDV 847
            MVDCVVFPQKG+RPHPNECSGSDLDGDLYFV WDPELT I+P+KPMSYEPAPT++LDHDV
Sbjct: 785  MVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIRPIKPMSYEPAPTIQLDHDV 844

Query: 848  TMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPKTGVP 907
            T+ EVQEY   YMVNDGLGGIANAHTVFAD KPKKAM+AECI+LAKLFSIAVDFPKTGVP
Sbjct: 845  TLEEVQEYFANYMVNDGLGGIANAHTVFADMKPKKAMSAECIELAKLFSIAVDFPKTGVP 904

Query: 908  ANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATKCYD 967
            AN P +LRV EYPDFMEKP+K TY+SNGV+GKLFRGVKDVSSD+N +E F+REVA KCYD
Sbjct: 905  ANLPRSLRVHEYPDFMEKPNKRTYISNGVIGKLFRGVKDVSSDINNIETFTREVAVKCYD 964

Query: 968  PDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRNDME 1027
            PDMEV GFE+YLSEAF+YK  YDFKLGNLMDYYGI+TEPEL+SGNILRM KSFDKRNDME
Sbjct: 965  PDMEVMGFENYLSEAFDYKRMYDFKLGNLMDYYGIETEPELVSGNILRMGKSFDKRNDME 1024

Query: 1028 QISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNEGMQ 1087
            QISLAM+SLRKEAR WFNEK SKS Y+ +  +D EYAKASAWY VTYHP++WGRYNEGMQ
Sbjct: 1025 QISLAMRSLRKEARGWFNEKASKSIYNNNKGEDNEYAKASAWYHVTYHPNFWGRYNEGMQ 1084

Query: 1088 RDHFLSFPWCVSDKLIQIKREKTCLVNFSPV 1097
            RDHFLSFPWCVSDKLIQIKREK   +  SPV
Sbjct: 1085 RDHFLSFPWCVSDKLIQIKREK---MESSPV 1102

BLAST of Cp4.1LG13g06620 vs. ExPASy TrEMBL
Match: A0A6J1EB47 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111430971 PE=3 SV=1)

HSP 1 Score: 1790 bits (4637), Expect = 0.0
Identity = 893/1112 (80.31%), Postives = 979/1112 (88.04%), Query Frame = 0

Query: 8    GKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRFTSKLGGE 67
            GKTIE+FGF  +V+A EVKEF+ENHTG+GTV  VRISKP  EK+R T A V F SK+  E
Sbjct: 5    GKTIEVFGFGREVSAGEVKEFMENHTGEGTVSKVRISKPKYEKSRLTSARVEFRSKVAAE 64

Query: 68   YVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNLVSKEEMK 127
            YVV +A AE+RLWFG  YLKAR+VERE       RV   LER+E V VQ G+++ K+EM+
Sbjct: 65   YVVEKAEAEERLWFGRWYLKARRVERE--REREMRVE-RLERLEKVRVQLGSVIWKDEMR 124

Query: 128  VIWKGEKWSVEYGIGVRKLGFYLSY--EGVEYKMELCFENILG----------------- 187
            VIW+GE WSVEYG G+RKL FYLSY  E  +YKMEL FENILG                 
Sbjct: 125  VIWRGEDWSVEYGNGMRKLWFYLSYGVEDDDYKMELRFENILGVQLRCPHNSSSNLFLIQ 184

Query: 188  LQGAPRIFKKAPLSSSSRLS---SEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGDQL 247
            LQGAPRIFKK P SSSS  S   S+ESTGFRWIRDVDFTPSSCIGQSFALC E+S GDQL
Sbjct: 185  LQGAPRIFKKCPSSSSSSSSQFYSKESTGFRWIRDVDFTPSSCIGQSFALCFEVSPGDQL 244

Query: 248  PSFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHGYL 307
            PSFFQTLVGYKE Y PF L TGS+ SS SNLVPI+TPPQ FHI YKILF+INAL+QHGYL
Sbjct: 245  PSFFQTLVGYKEIYGPFKLSTGSAFSSTSNLVPIVTPPQPFHIPYKILFKINALVQHGYL 304

Query: 308  PGPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLPWK 367
            PG ALD++FFRLVDP+RFRSDY+EYAL+KLF LKECCYEPQKWLKQQYLSF SS QLPWK
Sbjct: 305  PGSALDDKFFRLVDPTRFRSDYIEYALEKLFSLKECCYEPQKWLKQQYLSFCSSMQLPWK 364

Query: 368  PNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDKLH 427
             N+SLDD LVYVHRVQITP KVYFRGPEANLSNRVVR FIDD+DNFLRVSFVDEELDK++
Sbjct: 365  ANISLDDSLVYVHRVQITPAKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKIY 424

Query: 428  SIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASRKG 487
            S DLSPRTS E   RTRVYDR+LSVLRNGIVIG KKFEFLAFSASQLRENS WMFASR+G
Sbjct: 425  SSDLSPRTSTEKIERTRVYDRILSVLRNGIVIGGKKFEFLAFSASQLRENSFWMFASREG 484

Query: 488  LSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKITYC 547
            L+AADIR WMGDFR+IRNVAKYAARLGQSFGSSR+TLCVE++EIEVI DVEVE   I YC
Sbjct: 485  LNAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEENEIEVIPDVEVERKNIKYC 544

Query: 548  FSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSMLKY 607
            FSDGIGKIS  LAE VAEKCGLISHTPSAFQIRYAGYKGVVA+DPTS KKLSLRKSMLKY
Sbjct: 545  FSDGIGKISEALAEMVAEKCGLISHTPSAFQIRYAGYKGVVAVDPTSKKKLSLRKSMLKY 604

Query: 608  TSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRAL 667
             SLDTQ+DVLSWSKYQPCFLNRQVINLLSTLGI+D VFVK+QK+A+DQLDSIL DPS+AL
Sbjct: 605  MSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIQDDVFVKQQKKAVDQLDSILRDPSKAL 664

Query: 668  EVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRTMM 727
            EVLELMSPGEMTS+LK++LL Y P+EEPFLNMMLRTFRA KLLDLRTKSRIFVP+GRTMM
Sbjct: 665  EVLELMSPGEMTSVLKDMLLFYNPHEEPFLNMMLRTFRADKLLDLRTKSRIFVPEGRTMM 724

Query: 728  GCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALH 787
            GCLDETRTLEYGQVF+HCS+PGRSSESNFVVKGKVVVAKNPCLHPGDVR+LDAVDVK LH
Sbjct: 725  GCLDETRTLEYGQVFIHCSVPGRSSESNFVVKGKVVVAKNPCLHPGDVRVLDAVDVKTLH 784

Query: 788  HMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLDHD 847
            HMVDCVVFPQKG+RPHPNECSGSDLDGDLYFV WDPELT I+P+KPMSYEPAPT++LDHD
Sbjct: 785  HMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIRPIKPMSYEPAPTIQLDHD 844

Query: 848  VTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPKTGV 907
            VT+ EVQEY   YMVNDGLGGIANAHTVFAD+KPKKAM+AECI+LAKLFSIAVDFPKTGV
Sbjct: 845  VTIEEVQEYFANYMVNDGLGGIANAHTVFADKKPKKAMSAECIELAKLFSIAVDFPKTGV 904

Query: 908  PANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATKCY 967
            PAN P +LRV EYPDFMEKP+K TY SNGV+GKLFRGVKDVSSD+N +E F+REVA KCY
Sbjct: 905  PANLPRSLRVHEYPDFMEKPNKRTYTSNGVIGKLFRGVKDVSSDINNIETFTREVAAKCY 964

Query: 968  DPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRNDM 1027
            DPDMEV GFE+YLSEAF+YK+ YDFKLGNLMDYYGI+TEPEL+SGNILRM KSFDKRNDM
Sbjct: 965  DPDMEVMGFENYLSEAFDYKSMYDFKLGNLMDYYGIETEPELVSGNILRMGKSFDKRNDM 1024

Query: 1028 EQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNEGM 1087
            EQISLAM+SLRKEAR WFNEKGSKS Y+ + ++D+EYAKASAWY VTYHP++WGRYNEGM
Sbjct: 1025 EQISLAMRSLRKEARGWFNEKGSKSIYNNNKDEDDEYAKASAWYHVTYHPNFWGRYNEGM 1084

Query: 1088 QRDHFLSFPWCVSDKLIQIKREKTCLVNFSPV 1097
            QRDHFLSFPWCVS+KLIQIKREK   +  SPV
Sbjct: 1085 QRDHFLSFPWCVSEKLIQIKREK---MESSPV 1110

BLAST of Cp4.1LG13g06620 vs. ExPASy TrEMBL
Match: A0A0S1YCZ4 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1c PE=2 SV=1)

HSP 1 Score: 1774 bits (4594), Expect = 0.0
Identity = 889/1109 (80.16%), Postives = 964/1109 (86.93%), Query Frame = 0

Query: 7    MGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRFTSKLGG 66
            MGKTIEI+GF  QVTADEVKEF+ENHTGDGTV TVRISKP DEKARFT  TV F SKL  
Sbjct: 1    MGKTIEIYGFRPQVTADEVKEFLENHTGDGTVSTVRISKPKDEKARFTSVTVLFKSKLAA 60

Query: 67   EYVVAQAAAEKR-LWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNLVSKEE 126
            EY+VA++  E+R LWF S YLKAR++E+ +       V  E+ERME+V    G+++S  +
Sbjct: 61   EYIVAKSTTEERKLWFESSYLKARELEKAVVANETKGVL-EMERMEDVKGHLGSMISNGK 120

Query: 127  MKVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILG----------------- 186
            M+VIW+GEKWSVE+G G RKL FYLSYE  EYKMELCFENIL                  
Sbjct: 121  MRVIWEGEKWSVEFGNGFRKLWFYLSYEVDEYKMELCFENILSVEFRCPLNEPSKFFLIQ 180

Query: 187  LQGAPRIFKKAPLSSSSRLSSEESTGFRWIRDVDFTPSSCIGQSFALCLELSHGDQLPSF 246
            LQGAPRIF+K P SSSS L S +ST FRWIRDVDFTPSSCIGQSF +CL+LS    LP F
Sbjct: 181  LQGAPRIFRKTPSSSSSPLYSNKSTSFRWIRDVDFTPSSCIGQSFTICLQLSPSHHLPPF 240

Query: 247  FQTLVGYKESYAPFILHTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHGYLPGP 306
            FQTLVGYK +YAPFILH GSSL S SNLVPIITPPQ F ISYKILF+INALLQHGYL GP
Sbjct: 241  FQTLVGYKVTYAPFILHKGSSLVSNSNLVPIITPPQAFDISYKILFKINALLQHGYLSGP 300

Query: 307  ALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLPWKPNV 366
             LD+EFFRLVD SRF SDY+E+AL+KLF+LKECCY+PQKWLK QYLS+Y+S QLPWK N+
Sbjct: 301  TLDDEFFRLVDSSRFHSDYIEHALEKLFNLKECCYKPQKWLKDQYLSYYTSNQLPWKSNI 360

Query: 367  SLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDKLHSID 426
            SLDDGLVYVHRVQITP KVYF GPEANLSNRVVR FI D+DNFLRVSFVDEELDKLHSID
Sbjct: 361  SLDDGLVYVHRVQITPLKVYFCGPEANLSNRVVRRFIGDIDNFLRVSFVDEELDKLHSID 420

Query: 427  LSPRTSA-ENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASRKGLS 486
            L+PR+S+ EN  RTRVYDRV+S+L+NGIVIG+KKFEFLAFSASQLRENS WMFASR+GLS
Sbjct: 421  LAPRSSSPENSQRTRVYDRVISILKNGIVIGNKKFEFLAFSASQLRENSFWMFASREGLS 480

Query: 487  AADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKITYCFS 546
            AADIR WMGDF  IRNVAKYAARLGQSFGSSR+TLCVE+HEIEVI DVEVE   I YCFS
Sbjct: 481  AADIREWMGDFHHIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVIPDVEVERKNIMYCFS 540

Query: 547  DGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSMLKYTS 606
            DGIGKIS TLA+KVAEKCGL SHTPSAFQIRYAGYKGVVAIDPTS KKLSLRKSMLKY S
Sbjct: 541  DGIGKISKTLAKKVAEKCGLTSHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYMS 600

Query: 607  LDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRALEV 666
            LDTQ+DVL WSKYQPCFLNRQVINLLSTLGI+D VFVKKQKEAIDQLDSILEDPSRALEV
Sbjct: 601  LDTQLDVLLWSKYQPCFLNRQVINLLSTLGIRDDVFVKKQKEAIDQLDSILEDPSRALEV 660

Query: 667  LELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRTMMGC 726
            LELMSPGEMTSILKELL  Y PN+EPFLNMMLRTFRA KLLDLRTKSRIFVPKGRTMMGC
Sbjct: 661  LELMSPGEMTSILKELLSFYMPNQEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGC 720

Query: 727  LDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALHHM 786
            LDET+TLEYGQVFVHCS+PGRSSE NFVVKGKVVVAKNPCLHPGDVRLLDA+DVKALHHM
Sbjct: 721  LDETQTLEYGQVFVHCSIPGRSSEGNFVVKGKVVVAKNPCLHPGDVRLLDAIDVKALHHM 780

Query: 787  VDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLDHDVT 846
            VDCVVFPQKG+RPHPNECSGSDLDGDLYFV WD ELT IK VKPMSY+PAPT++LDHDVT
Sbjct: 781  VDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDTELTCIKQVKPMSYKPAPTIQLDHDVT 840

Query: 847  MGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPKTGVPA 906
            + EVQEY   YMVNDGLG IANAHTVFAD+  KKAM+AECIKLAKLFSIAVDFPKTGVPA
Sbjct: 841  IEEVQEYFANYMVNDGLGAIANAHTVFADKNSKKAMSAECIKLAKLFSIAVDFPKTGVPA 900

Query: 907  NFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVATKCYDP 966
            N P NLRV EYPDFM+KP+K TYVSNGVLGKLFRGVKDVSSDV+  EIF+REVATKCYDP
Sbjct: 901  NLPRNLRVHEYPDFMDKPNKATYVSNGVLGKLFRGVKDVSSDVSAFEIFTREVATKCYDP 960

Query: 967  DMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKRNDMEQ 1026
            DMEVDGFE YL EAF+YK +YDFKLGNLMDYYGIKTEPEL+SGNIL+MAKSFDKR D+EQ
Sbjct: 961  DMEVDGFEKYLREAFDYKTKYDFKLGNLMDYYGIKTEPELVSGNILKMAKSFDKRKDLEQ 1020

Query: 1027 ISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNEGMQR 1086
            I+ AMKSLRKE R WFNE  SKS YD+     +EYA+ASAWY VTYHPDYWG YNEG +R
Sbjct: 1021 IAFAMKSLRKEVRFWFNENESKSTYDD---IQDEYARASAWYCVTYHPDYWGCYNEGTKR 1080

Query: 1087 DHFLSFPWCVSDKLIQIKREKTCLVNFSP 1096
            DHFLSFPWCV+DKLIQIKREK  + N SP
Sbjct: 1081 DHFLSFPWCVADKLIQIKREKMSMRNSSP 1105

BLAST of Cp4.1LG13g06620 vs. TAIR 10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1 )

HSP 1 Score: 1222.6 bits (3162), Expect = 0.0e+00
Identity = 630/1104 (57.07%), Postives = 799/1104 (72.37%), Query Frame = 0

Query: 7    MGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRFTSKLGG 66
            MGKTI++FGFP  V+A+EVK+F+E  TG GTV  +++ +P     R  +A V+FTS+   
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPR-VYAIVQFTSERHT 60

Query: 67   EYVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNLVSKEEM 126
              ++   AA +RL++G  YLKA +VE++I     A +H     +  + + +G  VS ++ 
Sbjct: 61   RLII--TAAAERLYYGRSYLKAFEVEQDIVPKPRASLH----TISGLKMFFGCQVSTKKF 120

Query: 127  KVIWKGEKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENI-----------------LGL 186
              +W  +   V +GIG+RKL F  S+   +Y++EL +ENI                 + +
Sbjct: 121  LTLWSAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQV 180

Query: 187  QGAPRIFKK--APLSSSSRLSSEESTGF--RWIRDVDFTPSSCIGQSFALCLELSHGDQL 246
             GAP+IF+K   P++    +    S G   +WIR  DFT SSCIGQS A CLEL     +
Sbjct: 181  IGAPKIFEKEDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNV 240

Query: 247  PSFFQTLVGYKESYA-PFILHTGSSLSSISN-LVPIITPPQGFHISYKILFQINALLQHG 306
            P F +    Y E  A  F++ +GSS SS +N LVP++ PP GF + ++ILF++N L+Q+ 
Sbjct: 241  PDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNA 300

Query: 307  YLPGPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSKQLP 366
             L GPALD +F+RL++  ++    +++ L+KLFHL ECCYEP  WL+ +Y  + S  +LP
Sbjct: 301  CLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLP 360

Query: 367  WKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDK 426
              P +SLDDGLVY++RVQ+TP +VYF GPE N+SNRV+RH+   ++NFLRVSFVDE+L+K
Sbjct: 361  LSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEK 420

Query: 427  LHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASR 486
            + S+DLSPR+S +   RT++YDR+ SVLR+GIVIGDKKFEFLAFS+SQLRENS WMFA  
Sbjct: 421  VRSMDLSPRSSTQR--RTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPI 480

Query: 487  KGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKIT 546
              ++AA IRAWMGDF  IRNVAKYAARLGQSF SSR TL V   EIEVI DVE+ +    
Sbjct: 481  DRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTR 540

Query: 547  YCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSML 606
            Y FSDGIGKIS   A KVA KCGL   +PSAFQIRY GYKGVVA+DP S+KKLSLRKSM 
Sbjct: 541  YVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMS 600

Query: 607  KYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSR 666
            K+ S +T++DVL+WSKYQPC++NRQ+I LLSTLG+ D VF KKQ+E +D+LD+IL  P  
Sbjct: 601  KFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLE 660

Query: 667  ALEVLELMSPGEMTSILKELLLL-YKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGR 726
            A E L LM+PGE T+ILK L+L  YKP+ EPFL+MML+ FRA+KLL+LRTK+RIF+  GR
Sbjct: 661  AHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGR 720

Query: 727  TMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVK 786
            +MMGCLDETRTLEYGQV V  S P R     F++ G VVVAKNPCLHPGDVR+L AV+V 
Sbjct: 721  SMMGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVVVAKNPCLHPGDVRVLQAVNVP 780

Query: 787  ALHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMRL 846
            AL+HMVDCVVFPQKG RPHPNECSGSDLDGD+YFV WD EL   +  +PM Y P PT  L
Sbjct: 781  ALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQIL 840

Query: 847  DHDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTAECIKLAKLFSIAVDFPK 906
            DHDVT+ EV+EY   Y+VND LG IANAHT FAD++P KA +  CI+LAK FS AVDFPK
Sbjct: 841  DHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPK 900

Query: 907  TGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVAT 966
            TGV A  P +L V+EYPDFMEKPDKPTY S  V+GKLFR VK+ +  + +++ F+ +VA+
Sbjct: 901  TGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVAS 960

Query: 967  KCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKR 1026
            K YD DMEVDGFE+Y+ EAF  KA YDFKLGNLMDYYGIKTE E++SG I+RM+KSF KR
Sbjct: 961  KSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKR 1020

Query: 1027 NDMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYN 1086
             D E I  A+++LRKE  S FN      A +E++N   E AKASAWY VTYH  YWG YN
Sbjct: 1021 RDAESIGRAVRALRKETLSLFN------ASEEEEN---ESAKASAWYHVTYHSSYWGLYN 1080

BLAST of Cp4.1LG13g06620 vs. TAIR 10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2 )

HSP 1 Score: 749.2 bits (1933), Expect = 4.7e-216
Identity = 453/1142 (39.67%), Postives = 652/1142 (57.09%), Query Frame = 0

Query: 1    MATTNDMGKTIEIFGFPAQVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRF 60
            ++ T     T++I   P  + ADE+  F+E H G+ TV  + I    D      FA V+F
Sbjct: 2    VSETTTNRSTVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQF 61

Query: 61   TSKLGGEYVVAQAAAEKRLWFGSLYLKARKVEREIKTTAAARVHGELERMENVNVQWGNL 120
            T+ L  +      +++ +L F +  L+  +   +I      R     +R++++ +  G  
Sbjct: 62   TT-LEVKSRAQLLSSQSKLLFKTHNLRLSEAYDDI----IPRPVDPRKRLDDIVLTVGFP 121

Query: 121  VSKEEMKVIWKGEKW-SVEYGI--GVRKLGFYLSYEGVEYKMELCFENI----------- 180
             S E  K     EKW  V   I    R++ F++   G  YK+E+ FE+I           
Sbjct: 122  ESDE--KRFCALEKWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGD 181

Query: 181  --------LGLQGAPRIFKKAPLSSSSRLSSE------ESTGFRWIRDVDFTPSSCIGQS 240
                    L L+  P++FK+  +  +++  S+      E   F WIR  DF+ S  IG S
Sbjct: 182  ASEIDAFLLKLKYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTS 241

Query: 241  FALCLELSHGDQLPSFFQTLVGYKESYAPFILHTGSSLSSISNLVPIITPP-QGFHISYK 300
               CLE+ +G  +   F  L  Y+E         G + +S + +VP++     G    Y+
Sbjct: 242  TCFCLEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYE 301

Query: 301  ILFQINALLQHGYLP-GPALDNEFFRLVDPSRFRSDYVEYALDKLFHLKECCYEPQKWLK 360
            ILFQ+NAL+    +    A D E  +++      +  V   L KL      CY+P  ++K
Sbjct: 302  ILFQLNALVHAQKISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVK 361

Query: 361  QQYLSFYSS-KQLPWKPNVSL-DDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDV 420
             Q  S     K  P      L +  ++   R  +TP+K+Y  GPE   +N VV++F + V
Sbjct: 362  TQMQSVVKKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHV 421

Query: 421  DNFLRVSFVDEELDKLHSIDLSPRTSA---ENDLRTRVYDRVLSVLRNGIVIGDKKFEFL 480
             +F+RV+FV+E+  KL +  LS  +         RT +Y+RVLS+L  GI +G K+FEFL
Sbjct: 422  SDFMRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFL 481

Query: 481  AFSASQLRENSCWMFASRKGLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVE 540
            AFSASQLR NS WMFAS + + A DIR WMG FR+IR+++K AAR+GQ F +SR+TL V 
Sbjct: 482  AFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVR 541

Query: 541  QHEIEVISDVEVETNKITYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGV 600
              ++E I D+EV T+   YCFSDGIGKIS   A++VA+KCGL SH PSAFQIRY GYKGV
Sbjct: 542  AQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGV 601

Query: 601  VAIDPTSTKKLSLRKSMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVK 660
            +A+D +S +KLSLR SMLK+ S +  ++V  W++  PCFLNR++I LLSTLGI+D +F  
Sbjct: 602  IAVDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEA 661

Query: 661  KQKEAIDQLDSILEDPSRALEVLELMSPGEMTSILKELLLL-YKPNEEPFLNMMLRTFRA 720
             Q   +  L ++LED   AL VL+ +S     ++L ++LL  Y P+ EP+L+MMLR    
Sbjct: 662  MQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHE 721

Query: 721  AKLLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSLP------------GRSSES 780
            ++L +L+++ RI VPKGR ++GC+DE   LEYGQV+V  +L              +  E 
Sbjct: 722  SQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEE 781

Query: 781  NFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALHH--MVDCVVFPQKGERPHPNECSGSDL 840
              VV GKVVV KNPCLHPGD+R+LDA+          +DC++FPQKGERPHPNECSG DL
Sbjct: 782  TSVVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDL 841

Query: 841  DGDLYFVGWDPELTRIKPVKPMSYEPAPTMRLDHDVTMGEVQEYLVKYMVNDGLGGIANA 900
            DGD +FV WD ++   +   PM Y  +    +DHDVT+ E+ ++ V YM++D LG I+ A
Sbjct: 842  DGDQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTA 901

Query: 901  HTVFADQKPKKAMTAECIKLAKLFSIAVDFPKTGVPANFPHNLRVREYPDFMEKPDKPTY 960
            H V AD+ P+KA + +C++LA L S AVDF KTG PA  P+ L+ RE+PDF+E+ +KPTY
Sbjct: 902  HLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTY 961

Query: 961  VSNGVLGKLFRGVKDVSSDVNTVEIFSREVATKCYDPDMEVDGFEDYLSEAFEYKARYDF 1020
            +S  V GKL+R VK   S +   +  +    T  YD  +E  GFE ++  A  ++  Y  
Sbjct: 962  ISESVFGKLYRAVK---SSLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGE 1021

Query: 1021 KLGNLMDYYGIKTEPELISGNI----LRMAKSFDKRNDM-EQISLAMKSLRKEARSWFNE 1080
            KL +LM YYG   E E+++G +    + +A+   +  DM ++I+L++K L KEA  WF  
Sbjct: 1022 KLTSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWF-- 1081

Query: 1081 KGSKSAYDEDDNKDEEYAKASAWYRVTYHPDYWGRYNEGMQRDHFLSFPWCVSDKLIQIK 1088
               KS  DE   K      ASAWY VTY+P      N   ++  FLSFPW V D L+ IK
Sbjct: 1082 --EKSCEDEQQKK----KLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIK 1116

BLAST of Cp4.1LG13g06620 vs. TAIR 10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6 )

HSP 1 Score: 570.1 bits (1468), Expect = 3.9e-162
Identity = 390/1084 (35.98%), Postives = 572/1084 (52.77%), Query Frame = 0

Query: 109  RMENVNVQWGNLVSKEEMKVIWKGEKWSVEYGIG---------VRKLGFYLSYEGV---- 168
            ++  + ++ G LVS+++  V W+ E   V++ +           RK   +   + V    
Sbjct: 131  KLAGITLEIGTLVSRDDFFVSWRAE--GVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAV 190

Query: 169  ---EYKMELC---------------FENILGLQGAPRIFKKA------PLSSSSRLSSEE 228
               +YK+EL                F  IL L  +PR++ +              L  ++
Sbjct: 191  INCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDTVPGDLLDDDD 250

Query: 229  STGFRWIRDVDFTPSSCIGQ--SFALCLELSHGDQLPS---FFQTLVGYKE--SYAPFIL 288
                 WIR  DFT    IG+  S+ + +   + ++L +   +F+     +E   + P I 
Sbjct: 251  P----WIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVRWPPRIR 310

Query: 289  HTGSSLSSISNLVPIITPPQGFHISYKILFQINALLQHGYLPGPALDNEFFRLVDPSRFR 348
            +       +S+    I   +G  IS++I+F +N++L  G      L   FF L+     R
Sbjct: 311  NEPCFGEPVSDHFFCIHHKEG--ISFEIMFLVNSVLHRGVFNQFQLTERFFDLL-----R 370

Query: 349  SDYVEYALDKLFHLKECCYE------------PQKWLKQQYLSFYSSKQLPWKPNVSLDD 408
            +   +  +  L HL  C Y+             Q+W+++      S +Q          +
Sbjct: 371  NQPKDVNIASLKHL--CTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQ---------SE 430

Query: 409  GLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELDKLHSIDLS-- 468
             +  + R+ ITPT+ Y   PE  LSNRV+R +    + FLRV+F+DE +  ++S  LS  
Sbjct: 431  DISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYF 490

Query: 469  ------PRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFASRK 528
                    TS+    +T V+ RV S+L +G  +  +K+ FLAFSA+QLR+ S W FA   
Sbjct: 491  VAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDG 550

Query: 529  GLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEV-ISDVEVETNKIT 588
                +DI+ WMG F+  +NVAK AAR+G  F S+  T+ V  HE++  + D+E    +  
Sbjct: 551  KTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE----RNG 610

Query: 589  YCFSDGIGKISGTLAEKVAEKCGL-ISHTPSAFQIRYAGYKGVVAIDPTSTK--KLSLRK 648
            Y FSDGIG I+  LA++V EK  L + ++P A+QIRYAG+KGVVA  P+ +   +L+LR 
Sbjct: 611  YVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRD 670

Query: 649  SMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILED 708
            SM K+ S  T +++ SW+++QP FLNRQ+I LLS LG+ D +F   Q+  + +L+ IL+D
Sbjct: 671  SMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDD 730

Query: 709  PSRALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPK 768
               A EVL      +  +    L   +KP  EP L  ML + R A+L  LR KSRIFV  
Sbjct: 731  TDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTS 790

Query: 769  GRTMMGCLDETRTLEYGQVFVHCSLP----------GRSSESNF---VVKGKVVVAKNPC 828
            GR +MGCLDE   LE+GQ F+  S P           R  E+     VVKG V +AKNPC
Sbjct: 791  GRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPC 850

Query: 829  LHPGDVRLLDAVDVKALHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPEL--TR 888
            LHPGDVR+L+AVDV  LHHM DC++FPQKG+RPH NE SGSDLDGDLYFV WD +L    
Sbjct: 851  LHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPN 910

Query: 889  IKPVKPMSYEPAPTMRLDHDVTMGEVQEYLVKYMVNDGLGGIANAHTVFADQKPKKAMTA 948
             K    M Y+ A    L   V   ++ ++  + + N+ LG I NAH V AD+    AM  
Sbjct: 911  RKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDE 970

Query: 949  ECIKLAKLFSIAVDFPKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKD 1008
            EC+ LA+L + AVDFPKTG   + P +L+ + YPDFM K D  TY SN +LG+L+R VK+
Sbjct: 971  ECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKE 1030

Query: 1009 V-SSDVNTVEIFSREVATKCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTE 1068
            V   D       S + +   YD  +E+ GFED + EA+ +K  YD +L  L+  Y ++ E
Sbjct: 1031 VYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKE 1090

Query: 1069 PELISGNILRMAKSFDKRND--MEQISLAMKSLRKEARSWFNEKGSKSAYDEDDNKDEEY 1098
             E+++G+I  M K   K+     E++  +  SL+KE R  F E         ++ K+  Y
Sbjct: 1091 EEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILY 1150

BLAST of Cp4.1LG13g06620 vs. TAIR 10
Match: AT2G19930.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 119.4 bits (298), Expect = 1.8e-26
Identity = 134/528 (25.38%), Postives = 227/528 (42.99%), Query Frame = 0

Query: 465 GLSAADIRAWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEI--EVISDVE------ 524
           G S  + R       +   +A Y AR      S  +TL V+   I  + I D+       
Sbjct: 327 GKSIYEARMHFMHVHRAPTLANYMARFSLIL-SKTKTLEVDMTGITFDQIDDIHCHDQDG 386

Query: 525 ---VETNKITYCFSDGIGKISGTLA---------------EKVAEKCGLISHTPSAFQIR 584
              ++ NK     SDG G IS  LA               E + E C         F++ 
Sbjct: 387 KDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMF 446

Query: 585 YAGY--KGVVAID-PTSTKKLSLRKSMLK---------YTSLDTQVDVLSWSKYQPCFLN 644
           Y GY  KG   ++     + + +R SM+K         +++ +    V + +  +   L+
Sbjct: 447 YDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLS 506

Query: 645 RQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRALEVLELMSPGEM-TSILKELLL 704
           + ++ LLS  GI +  F+      +++  SI  +   AL     ++ GEM      +++L
Sbjct: 507 KNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNA--ALNYGEMDDQNAAQMIL 566

Query: 705 LYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQVFVHCSL 764
           +  P +EP L   L      +  DL+   ++ V +   +MG +D T  L+  +V V    
Sbjct: 567 VGIPLDEPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVIL-- 626

Query: 765 PGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALHHMVD----CVVFPQKGERPH 824
                  +  + G+V+V +NP LH GD+ +L A  VKAL   V      V FPQKG R  
Sbjct: 627 ------ESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSL 686

Query: 825 PNECSGSDLDGDLYFVGWDPE-LTRIKPVKPMSYEPAPTM----RLDHDVTMGEVQEYLV 884
            +E +G D DGD+YF+  +PE L   KP +P      P+     R    ++  E++E L 
Sbjct: 687 GDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELF 746

Query: 885 KYMVNDG------LGGIANAHTVFADQ---------KPKKAMTAECIKLAKLFSIAVDFP 930
           +  +  G      +G  A++     D+         + K  M  + ++L  ++  A+D P
Sbjct: 747 EMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAP 806

BLAST of Cp4.1LG13g06620 vs. TAIR 10
Match: AT2G19910.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 119.0 bits (297), Expect = 2.4e-26
Identity = 117/452 (25.88%), Postives = 205/452 (45.35%), Query Frame = 0

Query: 555 FQIRYAGY--KGVVAID-PTSTKKLSLRKSMLK------YTSLDT--QVDVLSWSK-YQP 614
           F+I Y GY  KG    +     + + +R SM+K       ++L T   ++V++ S   + 
Sbjct: 455 FRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRK 514

Query: 615 CFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSRALEVLELMSPGEMTSILKE 674
             L+R ++ LLS  G+ +  F+   +  +++  +I      A +        + T+   +
Sbjct: 515 ARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYGDDQYTA---D 574

Query: 675 LLLLYKPNEEPF----LNMMLRTFRAAKLLDLRTKSRIFVPKGRTMMGCLDETRTLEYGQ 734
           ++L+  P +EP+    L+ +L+T R A         R  + +   +MG +D T  L+  +
Sbjct: 575 MILVGIPLDEPYLKDRLSYLLKTERNA-----LKAGRFPIDESYYIMGTVDPTGELKENE 634

Query: 735 VFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVKALHHMVD----CVVFP 794
           + V           +  + G V+V +NP LH GD+ +L A  VKAL   V      V FP
Sbjct: 635 ICVIL--------HSGQISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFP 694

Query: 795 QKGERPHPNECSGSDLDGDLYFVGWDPE-LTRIKPVKPMSYEPAPTM----RLDHDVTMG 854
           QKG R   +E +G D DGD+YF+  +P+ L   KP +P      P+     R   +++  
Sbjct: 695 QKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCGRKPSELSEE 754

Query: 855 EVQEYLVK------YMVNDGLG-------GIANAHTVFADQ--KPKKAMTAECIKLAKLF 914
           E++E L K      +   D +G       GI +      D+  K K       +KL  ++
Sbjct: 755 ELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKYERKKNILKLIDIY 814

Query: 915 SIAVDFPKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGV------KDVSS 961
             A+D PK G   + P +L ++ +P +ME+  K  + S  +LG +F  V      +   S
Sbjct: 815 YDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDTVDSHNAEEPPPS 874