Cp4.1LG13g06420 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g06420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein XRI1-like
Location	Cp4.1LG13: 4722926 .. 4724136 (-)
RNA-Seq Expression	Cp4.1LG13g06420
Synteny	Cp4.1LG13g06420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTACAAAATGAGTGGTGGTAGTGAACTTCACTCTCTATCTCTCTTCAATTCCTCGCCCTTGGGTATTGCAGTTATGGATGCCGCCGCCACCGCCGCCGCCGCGCTGGACTCATCTTTTATGCCGGCGATTTCCACCGGATATTTGGAAGATGCGTTGGTTGACTACAATTCCAAACGACGGCGTTTGGGTCATCATCTTGTTGAATTCGAATTCCCACAGAGGTACTGGAGTTCATTTTGCACATGGGGTGGAGATGCCCTTGCGAGTTTCGATTGGAACAACAACCAAATTGATGATATGAATAATTTTACAGGTGGGTTTTTCTTTTTTTTAAACAATTCAATTTATAATTAAACAATTGAATTGGAACTGAATTGGGGTTTTGGTGTTCATTGGTTGAAAGCAGAGGAAGGACTAAGCACTTCGCCCAAAAACAGAGTCCTCAAAACGCCGCCGGAAATGGAACCATTTTCCACTCCAAATTCCTCCGCAGGTCTTTACCTTTTCTTTTCGAACTTCCTAAAACGCGTCTAATAGAGACAGATTTACAGACCCTTAATTAGTTTTCCTCCAAAAACGATGTGGGATCTCACAATTTACCATTTCGGGACCTAGAGTCCTTGCCAACAGTGGGATCTTACAAGAATTTGAAAGTTGGAGTGTTTTGAGTTAATTTGGGGGTATTGTTGAAATTGAGCAGGGAGTGGAAGTGAAAGGAAGAAGAGGAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGAGTAGAAGGGGATATAACCTTAAACGACATAAACAAGAAGATGTTAATGCCTCCGACACGGGCGGTCCGACACCCGGTGGGGGATTTTGCGTGCCGGCCATACGTAACGGCGGAGGGACGGGGTCTATCCGGCAAAGCGGTGGTGGCGTTGACGAAAATCCATACTCAAGGAAGGAGAGGGAGCATCACCATTATCAGAACAAAGGGTTAACAATGGATTGAATATCATTACTTTTGGTTGAATTGTACAGAGACAAAGAAGAGAGAGTTTCGTTAATGAAGAGACTTTTTGCTCATTCCCAAACCCATCCAGAAAAAAAGTGTCTTTTTAAGAAATTTATATTTCTATGCCTTCTTTCTCCCTAACATATGTTTTAAAAGAACATATGTTTTAAAATCATGAATCTAACGATGACATGTAACAAGTTAAAACA

mRNA sequence

TAATTACAAAATGAGTGGTGGTAGTGAACTTCACTCTCTATCTCTCTTCAATTCCTCGCCCTTGGGTATTGCAGTTATGGATGCCGCCGCCACCGCCGCCGCCGCGCTGGACTCATCTTTTATGCCGGCGATTTCCACCGGATATTTGGAAGATGCGTTGGTTGACTACAATTCCAAACGACGGCGTTTGGGTCATCATCTTGTTGAATTCGAATTCCCACAGAGGTACTGGAGTTCATTTTGCACATGGGGTGGAGATGCCCTTGCGAGTTTCGATTGGAACAACAACCAAATTGATGATATGAATAATTTTACAGGGAGTGGAAGTGAAAGGAAGAAGAGGAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGAGTAGAAGGGGATATAACCTTAAACGACATAAACAAGAAGATGTTAATGCCTCCGACACGGGCGGTCCGACACCCGGTGGGGGATTTTGCGTGCCGGCCATACGTAACGGCGGAGGGACGGGGTCTATCCGGCAAAGCGGTGGTGGCGTTGACGAAAATCCATACTCAAGGAAGGAGAGGGAGCATCACCATTATCAGAACAAAGGGTTAACAATGGATTGAATATCATTACTTTTGGTTGAATTGTACAGAGACAAAGAAGAGAGAGTTTCGTTAATGAAGAGACTTTTTGCTCATTCCCAAACCCATCCAGAAAAAAAGTGTCTTTTTAAGAAATTTATATTTCTATGCCTTCTTTCTCCCTAACATATGTTTTAAAAGAACATATGTTTTAAAATCATGAATCTAACGATGACATGTAACAAGTTAAAACA

Coding sequence (CDS)

ATGAGTGGTGGTAGTGAACTTCACTCTCTATCTCTCTTCAATTCCTCGCCCTTGGGTATTGCAGTTATGGATGCCGCCGCCACCGCCGCCGCCGCGCTGGACTCATCTTTTATGCCGGCGATTTCCACCGGATATTTGGAAGATGCGTTGGTTGACTACAATTCCAAACGACGGCGTTTGGGTCATCATCTTGTTGAATTCGAATTCCCACAGAGGTACTGGAGTTCATTTTGCACATGGGGTGGAGATGCCCTTGCGAGTTTCGATTGGAACAACAACCAAATTGATGATATGAATAATTTTACAGGGAGTGGAAGTGAAAGGAAGAAGAGGAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGAGTAGAAGGGGATATAACCTTAAACGACATAAACAAGAAGATGTTAATGCCTCCGACACGGGCGGTCCGACACCCGGTGGGGGATTTTGCGTGCCGGCCATACGTAACGGCGGAGGGACGGGGTCTATCCGGCAAAGCGGTGGTGGCGTTGACGAAAATCCATACTCAAGGAAGGAGAGGGAGCATCACCATTATCAGAACAAAGGGTTAA

Protein sequence

MSGGSELHSLSLFNSSPLGIAVMDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRLGHHLVEFEFPQRYWSSFCTWGGDALASFDWNNNQIDDMNNFTGSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG

Homology

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BLAST of Cp4.1LG13g06420 vs. ExPASy Swiss-Prot
Match: Q6NLW5 (Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 116 VVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVV 175
           ++YPFA +KP GV G +TL DIN+K+  PP +   H             +    SGK VV
Sbjct: 226 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH------IEEPAVIQTSAFSGKPVV 285

Query: 176 ALTKIHTQGRRGSITIIRTKG 197
             TKI T+G +GSITI+RT+G
Sbjct: 286 GKTKIRTEGGKGSITIMRTRG 300

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BLAST of Cp4.1LG13g06420 vs. NCBI nr
Match: KAG7016686.1 (Protein XRI1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385 bits (990), Expect = 5.93e-135
Identity = 191/196 (97.45%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MSGGSELHSLSLFNSSPLGIAVMDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60
           MSGGSELHSLSLF+SSPLG AVMDAA  AAAALDSSFMPAISTGYLEDALVDYNSKRRRL
Sbjct: 1   MSGGSELHSLSLFDSSPLGFAVMDAATAAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60

Query: 61  GHHLVEFEFPQRYWSSFCTWGGDALASFDWNNNQIDDMNNFTGSGSERKKRKKRKVVYPF 120
           GHHLVEFEFPQRYWSSFCTWGGDAL SFDWNNNQIDDMNNFTGSGSERKKRKKRKVVYPF
Sbjct: 61  GHHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDDMNNFTGSGSERKKRKKRKVVYPF 120

Query: 121 ALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVVALTKI 180
           ALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVVALTKI
Sbjct: 121 ALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVVALTKI 180

Query: 181 HTQGRRGSITIIRTKG 196
           HTQGRRGSITIIRTKG
Sbjct: 181 HTQGRRGSITIIRTKG 196

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BLAST of Cp4.1LG13g06420 vs. NCBI nr
Match: XP_023551058.1 (uncharacterized protein LOC111809001 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379 bits (973), Expect = 6.51e-132
Identity = 196/225 (87.11%), Postives = 196/225 (87.11%), Query Frame = 0


Query: 1   MSGGSELHSLSLFNSSPLGIAVMDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60
           MSGGSELHSLSLFNSSPLGIAVMDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRL
Sbjct: 1   MSGGSELHSLSLFNSSPLGIAVMDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60

Query: 61  GHHLVEFEFPQRYWSSFCTWGGDALASFDWNNNQIDDMNNFT------------------ 120
           GHHLVEFEFPQRYWSSFCTWGGDALASFDWNNNQIDDMNNFT                  
Sbjct: 61  GHHLVEFEFPQRYWSSFCTWGGDALASFDWNNNQIDDMNNFTEEGLSTSPKNRVLKTPPE 120

Query: 121 -----------GSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180
                      GSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH
Sbjct: 121 MEPFSTPNSSAGSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180

Query: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 196
           PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG
Sbjct: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 225

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BLAST of Cp4.1LG13g06420 vs. NCBI nr
Match: XP_022939391.1 (protein XRI1-like [Cucurbita moschata])

HSP 1 Score: 359 bits (921), Expect = 4.93e-124
Identity = 187/225 (83.11%), Postives = 188/225 (83.56%), Query Frame = 0


Query: 1   MSGGSELHSLSLFNSSPLGIAVMDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60
           MSGGSELHSLSLF+SSPLG AVMDA     AALDSSFMPAISTGYLEDALVDYN KRRRL
Sbjct: 1   MSGGSELHSLSLFDSSPLGFAVMDATT---AALDSSFMPAISTGYLEDALVDYNPKRRRL 60

Query: 61  GHHLVEFEFPQRYWSSFCTWGGDALASFDWNNNQIDDMNNFT------------------ 120
           GHHLVEFEFPQRYWSSFCTWGGDAL SFDWNNNQIDDMNNFT                  
Sbjct: 61  GHHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDDMNNFTEEGISTSPKNRVLKTPPE 120

Query: 121 -----------GSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180
                      GSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH
Sbjct: 121 IEPFSTPNSSAGSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180

Query: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 196
           PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG
Sbjct: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 222

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BLAST of Cp4.1LG13g06420 vs. NCBI nr
Match: XP_022992584.1 (uncharacterized protein LOC111488886 [Cucurbita maxima])

HSP 1 Score: 356 bits (913), Expect = 7.88e-123
Identity = 188/225 (83.56%), Postives = 190/225 (84.44%), Query Frame = 0


Query: 1   MSGGSELHSLSLFNSSPLGIAVMDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60
           MSGGSELHSLSLFNSSPLGIAVMDAAA AAAALDSSFMPAISTGYLEDALVDYNSKRRRL
Sbjct: 1   MSGGSELHSLSLFNSSPLGIAVMDAAA-AAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60

Query: 61  GHHLVEFEFPQRYWSSFCTWGGDALASFDWNNNQIDDMNNFT------------------ 120
           GHHL+EFEFPQRYWSSFCTWGGDAL SFDWNNN+IDDMNNFT                  
Sbjct: 61  GHHLLEFEFPQRYWSSFCTWGGDALESFDWNNNKIDDMNNFTEEGISTSPKSRVFKTPPD 120

Query: 121 -----------GSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180
                      GSGSER   KKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH
Sbjct: 121 MEPFSTPNSSAGSGSER---KKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180

Query: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 196
           PVGDFACRPYVTAEGRGLSGKAVV LTKIHTQGRRGSITIIRTKG
Sbjct: 181 PVGDFACRPYVTAEGRGLSGKAVVTLTKIHTQGRRGSITIIRTKG 221

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BLAST of Cp4.1LG13g06420 vs. NCBI nr
Match: KAG6579169.1 (Protein XRI1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332 bits (852), Expect = 8.25e-114
Identity = 170/203 (83.74%), Postives = 170/203 (83.74%), Query Frame = 0


Query: 23  MDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRLGHHLVEFEFPQRYWSSFCTWGG 82
           MDA   AAAALDSSFMPAISTGYLEDALVDYNSKRRRLGHHLVEFEFPQRYWSSFCTWGG
Sbjct: 1   MDATTAAAAALDSSFMPAISTGYLEDALVDYNSKRRRLGHHLVEFEFPQRYWSSFCTWGG 60

Query: 83  DALASFDWNNNQIDDMNNFT-----------------------------GSGSERKKRKK 142
           DAL SFDWNNNQIDDMNNFT                             GSGSERKKRKK
Sbjct: 61  DALESFDWNNNQIDDMNNFTEEGISTSPKNRVLKTPPEIEPFSTPNSSAGSGSERKKRKK 120

Query: 143 RKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKA 196
           RKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKA
Sbjct: 121 RKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKA 180

[Close]

BLAST of Cp4.1LG13g06420 vs. ExPASy TrEMBL
Match: A0A6J1FFR7 (protein XRI1-like OS=Cucurbita moschata OX=3662 GN=LOC111445321 PE=4 SV=1)

HSP 1 Score: 359 bits (921), Expect = 2.39e-124
Identity = 187/225 (83.11%), Postives = 188/225 (83.56%), Query Frame = 0


Query: 1   MSGGSELHSLSLFNSSPLGIAVMDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60
           MSGGSELHSLSLF+SSPLG AVMDA     AALDSSFMPAISTGYLEDALVDYN KRRRL
Sbjct: 1   MSGGSELHSLSLFDSSPLGFAVMDATT---AALDSSFMPAISTGYLEDALVDYNPKRRRL 60

Query: 61  GHHLVEFEFPQRYWSSFCTWGGDALASFDWNNNQIDDMNNFT------------------ 120
           GHHLVEFEFPQRYWSSFCTWGGDAL SFDWNNNQIDDMNNFT                  
Sbjct: 61  GHHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDDMNNFTEEGISTSPKNRVLKTPPE 120

Query: 121 -----------GSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180
                      GSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH
Sbjct: 121 IEPFSTPNSSAGSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180

Query: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 196
           PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG
Sbjct: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 222

[Close]

BLAST of Cp4.1LG13g06420 vs. ExPASy TrEMBL
Match: A0A6J1JXY3 (uncharacterized protein LOC111488886 OS=Cucurbita maxima OX=3661 GN=LOC111488886 PE=4 SV=1)

HSP 1 Score: 356 bits (913), Expect = 3.81e-123
Identity = 188/225 (83.56%), Postives = 190/225 (84.44%), Query Frame = 0


Query: 1   MSGGSELHSLSLFNSSPLGIAVMDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60
           MSGGSELHSLSLFNSSPLGIAVMDAAA AAAALDSSFMPAISTGYLEDALVDYNSKRRRL
Sbjct: 1   MSGGSELHSLSLFNSSPLGIAVMDAAA-AAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60

Query: 61  GHHLVEFEFPQRYWSSFCTWGGDALASFDWNNNQIDDMNNFT------------------ 120
           GHHL+EFEFPQRYWSSFCTWGGDAL SFDWNNN+IDDMNNFT                  
Sbjct: 61  GHHLLEFEFPQRYWSSFCTWGGDALESFDWNNNKIDDMNNFTEEGISTSPKSRVFKTPPD 120

Query: 121 -----------GSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180
                      GSGSER   KKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH
Sbjct: 121 MEPFSTPNSSAGSGSER---KKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180

Query: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 196
           PVGDFACRPYVTAEGRGLSGKAVV LTKIHTQGRRGSITIIRTKG
Sbjct: 181 PVGDFACRPYVTAEGRGLSGKAVVTLTKIHTQGRRGSITIIRTKG 221

[Close]

BLAST of Cp4.1LG13g06420 vs. ExPASy TrEMBL
Match: A0A6J1CZC7 (uncharacterized protein LOC111015652 OS=Momordica charantia OX=3673 GN=LOC111015652 PE=4 SV=1)

HSP 1 Score: 229 bits (583), Expect = 4.52e-72
Identity = 144/286 (50.35%), Postives = 162/286 (56.64%), Query Frame = 0


Query: 5   SELHSLSLFNSSPLGIAVMDAAATAAA-ALDSSFMPAISTGYLEDALVDYNSKRRRL--- 64
           S+LHSLS    SPL  AVMDAA  A A A+D  F P +STGYLEDALV++ SKRRRL   
Sbjct: 3   SDLHSLS----SPLAFAVMDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLN 62

Query: 65  ----GHHLVE-FEFPQRYWSSFCTWGGDA---LASFDWNNNQIDDMNNF----------- 124
                ++LV+ F+FPQ YWSS+CTWG DA     +FDW N QI D NN+           
Sbjct: 63  DHIHNNNLVDQFQFPQSYWSSYCTWGADADNASDTFDWTN-QIYDFNNYDAVSADELIST 122

Query: 125 ------------------------------------------------------------ 184
                                                                       
Sbjct: 123 SPKSRISEETNYTDVSAMKTPEVEAFSTPNYNNYCYEHPNSSSSSSKHQFHAEFLADKQT 182

Query: 185 -----------TGSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVR 196
                      +G GSE K  KKRKVVYPFALVKPGGVEGDITLNDIN+K+LMPPTR VR
Sbjct: 183 ILSLSRKLPLSSGGGSETKNLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVR 242

[Close]

BLAST of Cp4.1LG13g06420 vs. ExPASy TrEMBL
Match: A0A0A0KMV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G099490 PE=4 SV=1)

HSP 1 Score: 215 bits (548), Expect = 7.68e-67
Identity = 139/292 (47.60%), Postives = 153/292 (52.40%), Query Frame = 0


Query: 2   SGGSELHSLSLFNSSPLGIAVMDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRLG 61
           S GSELHSL   NSSPLG A+M+ AA   A +D  F PAISTGYLEDALV+Y SKRRRL 
Sbjct: 4   SSGSELHSLPFLNSSPLGFAIMEGAA---AVIDPCFSPAISTGYLEDALVEYTSKRRRLD 63

Query: 62  ----HHLVEFEFPQRYWSSFCTWGGDALASFDWNNNQIDDMNN----------------- 121
               HH   F+FPQ               S+D+ NNQIDD+NN                 
Sbjct: 64  DHDQHHFFHFQFPQ--------------TSYDYWNNQIDDINNDYYYYYNYHAISTDEGI 123

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 124 SSSPKSRLSNEETSMEDMMKTQDVETYSTPNYYYEHPHPHHHHHHPNSSSSSSSKSHKFE 183

Query: 182 ---------------FTGSGS-ERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMP 196
                           TG G  E KK KKRKVVYPFALVKPGGVEGD+TLNDIN+K+LMP
Sbjct: 184 ADQKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMP 243

[Close]

BLAST of Cp4.1LG13g06420 vs. ExPASy TrEMBL
Match: A0A5D3BG61 (Protein XRI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00470 PE=4 SV=1)

HSP 1 Score: 208 bits (530), Expect = 3.65e-65
Identity = 123/210 (58.57%), Postives = 135/210 (64.29%), Query Frame = 0


Query: 30  AAALDSSFMPAISTGYLEDALVDYNSKRRRLGH---HLVEFEFPQRYWSSFCTWGGDALA 89
           AA +D  F PAISTGYLEDAL++Y SKRRRL H   H  +FEFPQ   SS+  W      
Sbjct: 6   AAVIDPCFSPAISTGYLEDALLEYTSKRRRLDHDQHHFFQFEFPQ---SSYHYW------ 65

Query: 90  SFDWNNNQIDDMNN-----------FTGSGS----------------------------- 149
                N+QIDDMNN            TG  S                             
Sbjct: 66  -----NHQIDDMNNDNYYYYNYDAISTGGFSLHYSIVIDEGISSSPKSRLSNEETSDGEI 125

Query: 150 ERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEG 196
           E KK KKRKVVYPFALVKPGGVEGD+TLNDIN+K+LMPPTR VRHPVGDFACRP V+A+G
Sbjct: 126 ETKKAKKRKVVYPFALVKPGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRPCVSADG 185

[Close]

BLAST of Cp4.1LG13g06420 vs. TAIR 10
Match: AT1G14630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01990.1); Has 125 Blast hits to 123 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 152.1 bits (383), Expect = 4.5e-37
Identity = 94/178 (52.81%), Postives = 115/178 (64.61%), Query Frame = 0


Query: 41  ISTGYLEDALVDYN--SKRRRLGHHLVE------FEFPQRYW----SSFCTWGGDALASF 100
           +STGYLEDAL++++  SKRRRL  +  E       +  Q +W    +  CT    A  S 
Sbjct: 50  VSTGYLEDALIEFSGRSKRRRLSFNGAEDKPDNDLDHSQNHWGLSENYSCTSSQFADESP 109

Query: 101 DWNNN-------QIDDMNNFTGSGSERKKR---KKRKVVYPFALVKPGGVEGDITLNDIN 160
           + + N        I   N+F  S S  KK    +K++VVYPF +VKPGG E DITLNDIN
Sbjct: 110 NSSINICSEEKSSISSRNSFEPSSSTSKKNDYDEKKRVVYPFGVVKPGGREEDITLNDIN 169

Query: 161 KKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 197
           K++LMP  R VRHPVGDFACRP V+A+G GLSGKAVVA TKI T G RG+ITIIRTKG
Sbjct: 170 KRILMPSARPVRHPVGDFACRPCVSADGPGLSGKAVVAFTKIQTLG-RGTITIIRTKG 226

[Close]

BLAST of Cp4.1LG13g06420 vs. TAIR 10
Match: AT2G01990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14630.1); Has 118 Blast hits to 118 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 125.9 bits (315), Expect = 3.5e-29
Identity = 63/89 (70.79%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 108 RKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGR 167
           + KR   K+VYPF LVKPGG E D+TLNDIN+++LM P+R +RHPVGDFA RP V+  G 
Sbjct: 126 KNKRLITKLVYPFGLVKPGGRENDVTLNDINERILMAPSRPIRHPVGDFASRPCVSGRGP 185

Query: 168 GLSGKAVVALTKIHTQGRRGSITIIRTKG 197
           GLSGKAVVALTKI TQG RG+ITIIRTKG
Sbjct: 186 GLSGKAVVALTKIQTQG-RGTITIIRTKG 213

[Close]

BLAST of Cp4.1LG13g06420 vs. TAIR 10
Match: AT5G48720.1 (x-ray induced transcript 1 )

HSP 1 Score: 71.6 bits (174), Expect = 7.8e-13
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 116 VVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVV 175
           ++YPFA +KP GV G +TL DIN+K+  PP +   H             +    SGK VV
Sbjct: 192 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH------IEEPAVIQTSAFSGKPVV 251

Query: 176 ALTKIHTQGRRGSITIIRTKG 197
             TKI T+G +GSITI+RT+G
Sbjct: 252 GKTKIRTEGGKGSITIMRTRG 266

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BLAST of Cp4.1LG13g06420 vs. TAIR 10
Match: AT5G48720.2 (x-ray induced transcript 1 )

HSP 1 Score: 71.6 bits (174), Expect = 7.8e-13
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 116 VVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVV 175
           ++YPFA +KP GV G +TL DIN+K+  PP +   H             +    SGK VV
Sbjct: 226 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH------IEEPAVIQTSAFSGKPVV 285

Query: 176 ALTKIHTQGRRGSITIIRTKG 197
             TKI T+G +GSITI+RT+G
Sbjct: 286 GKTKIRTEGGKGSITIMRTRG 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g06420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLW5	1.1e-11	44.44	Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2	[more]

BLAST of Cp4.1LG13g06420 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016686.1	5.93e-135	97.45	Protein XRI1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023551058.1	6.51e-132	87.11	uncharacterized protein LOC111809001 [Cucurbita pepo subsp. pepo]	[more]
XP_022939391.1	4.93e-124	83.11	protein XRI1-like [Cucurbita moschata]	[more]
XP_022992584.1	7.88e-123	83.56	uncharacterized protein LOC111488886 [Cucurbita maxima]	[more]
KAG6579169.1	8.25e-114	83.74	Protein XRI1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG13g06420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFR7	2.39e-124	83.11	protein XRI1-like OS=Cucurbita moschata OX=3662 GN=LOC111445321 PE=4 SV=1	[more]
A0A6J1JXY3	3.81e-123	83.56	uncharacterized protein LOC111488886 OS=Cucurbita maxima OX=3661 GN=LOC111488886...	[more]
A0A6J1CZC7	4.52e-72	50.35	uncharacterized protein LOC111015652 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A0A0KMV0	7.68e-67	47.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G099490 PE=4 SV=1	[more]
A0A5D3BG61	3.65e-65	58.57	Protein XRI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00470 P...	[more]

BLAST of Cp4.1LG13g06420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14630.1	4.5e-37	52.81	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G01990.1	3.5e-29	70.79	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G48720.1	7.8e-13	44.44	x-ray induced transcript 1	[more]
AT5G48720.2	7.8e-13	44.44	x-ray induced transcript 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039933	Protein XRI1	PANTHER	PTHR33385	PROTEIN XRI1	coord: 101..196
IPR039933	Protein XRI1	PANTHER	PTHR33385	PROTEIN XRI1	coord: 22..89
None	No IPR available	PANTHER	PTHR33385:SF18	XRI1-LIKE PROTEIN	coord: 22..89
None	No IPR available	PANTHER	PTHR33385:SF18	XRI1-LIKE PROTEIN	coord: 101..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g06420.1	Cp4.1LG13g06420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007143	female meiotic nuclear division
biological_process	GO:0007140	male meiotic nuclear division