Cp4.1LG13g05820 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACATCCTTTTGGTTCTGTTCGTTCATTTTACAACTCCAACATTGATGAATATACGCGCTAGTGATTCATCGAAAAGGATGGTTGCCACATTATCAGGTTGAATCCCAGCTTTCCAAGTCGACATGGGGACCCTCCTGATCTTCTTCTCAAATAAGGTCATGAATTGCTCTCTCTCCCTCCACTAATTTTTCCTCTTTTGATCTGCCGACTTGAATTATCCTTGGATTTTTTTTTTTTTCCCCGTTTCTAGTTTGTTTGGGATGAATTAAGATCAAAATGGGATTTCCTGAATACCCATAATGAACTAGAAATATATCTTTTGGGATCGTGCACACAAGGTGTTTGATGTAAGTCCTGGTACTTTTTTCACCTTCAGTGTGGTGCTTACAAGCTTTTTTTGATGCTGGGTGTGTCAGAGGAGAAGAAAATAGCGGTTATATTAGGTAAAGAACTGAGATTTTGTACTGAAAACATGATATCAAATGTCATTTCTGGTAAAACTATGCGACCGTTATGCCTTTTAGCATGTGCTAGGTGTTAGTTTTACCAATTGGGGTCTGTATGAAAAGTCAGCTGGCATCAGAAAGCCAATAAGCCAGCTCAAAAGTTTCAAAATCAAAGCCTCACCATTTCAAATTGAGGAAAAGTAGGAATCTGTAGTGCTATGATACAAAAGTTGTCTTGGGATCTATTTTCAATGGCTAACTTTTTCTATACTTTCTTCTTCTTATTTACTTTATCTGGGTGGGGTTGGGAGTTGGTTAAGAAATCGAATCCAAATTTCTAAATGGTATCATCAAAATTCATGTTAATAAATGTTCTAGCTATGAACATTCTTATATGGGTTATTTTGTCGAGTTGATCCTCCCCTCAGCGGACTGAGACCTTTGTAGGATGAATGTTGTTACTCTCTTATTTCCTTGAGGTTTTTGTTGAGCTAATGCTTAGAACAAGGCCTGTTCTGCAAGAGATTAGCCTTTCTTCCGAAGCTTTCTTAGGAGATTGGAGATATTTCAAAAGGCTTTCTGTTTTGCTTTCTTTCTAAAGTTACTAAACCTAAGATCTCTTTTTCTTTTTCTTTTTCCCAATTATCTTAATCTTTTTATTCTTTCTGATGCATCCTGGATGACTCAGACAACAGAAAGTAAGATTCACCAACAATTTTCGATCCCTTTAAATATAGTGGGAGAGCCAGAGATTGATACACTAGTCATTAAGCAAACATCTCCTCCCTGCTTCTTGCTAGTTAAGAACATCCTGGTTGAGTGGCTGTAGAGATCAAGCCACTCCTAGCAAGAGAATTTGTATAGCTGAATTTTCTTTATCATTAATCAAAGATGGAAGCTTTACTACAGAGACATGTTATTGGATTTCCAATTGGATCATCAGTTCAGAGACTCTTACCTGATCTTGCTGGCCACTACAACATTCCATCTCCAGACAGTAAATACCCAACATTAAAACAATGTAAGAAATCCCCCAAACTCATGCTTTGATAAATGAATGAATGAACAAGAAATGGGTTCTTGGATTGAGAATAGTCTTCATTTTTCAGGTAGTAAAGATTCAATGCTTAGCAGGGTGAACAAGCTTGGTAAAAGAGCTGACAGCTTTGCTCATGGAGTCCGGGAGCATGGTGAGTTTGTTAGTCTAGTTTCTTAGTTTATTATTAAGATTCTCAAACGCTTTGATATGCTGATCAAGAGAACAAAGAATTGGGATGAATAAACATCCAAGTGAGCTGATTGGAATGAAAGTTTGATAGAAACTTTTCGGTTTATGAGCAGTGAAACTAGGATCCAAGATCACAGAAACTGTCAAAGGAAAGTTGAGCTTAGGAGCTAGAATTCTTCAAGTAGGTGGATTAAGAAAAATCTACAAGCAATTGTTTAATGTTGGAGATGGTGAGAAACTATTGAAGGCTGTCCACTGCTATTTGTCAACCACAGCTGGACCTATTGCAGGTCTGCTCTTCATATCCACAGCTAAGATCGCCTTCTGCAGCGACAGATCGATCAAAGTTTCTTCCCCCACCGGAGAGCTAATTCGATTCCATTACAAGGTAAGCTCGCCCGAGCAATAGTTGCTTTCTTGTTCCTCGTCGTTATCGTCATCATCTTCTTCCTCTCACGCAGCACTAAAACTCGAAACAAATGGTTGTCTGCAGGTATTGATTCCAGTAGGAAAAATAGAGAGAATCAATCAAAGTGAGAATGTGATGAAGCCTTCACAGAAGTACATGGAAATAGTTACGGTGGATAATTTTGACTTCTGGTTTATGGGGTTCTTGAATTATCGCAAAACTCTTCAATATCTTCAAGATGTGATCTATCAAGAATGCAAGAAATGCTAGATGATTTGAGGAAGATATTGCAGAAGAAATGTTCTTTGGTTCCCCTCCCCCTTTTTTATCATTTGATCACAATACAATCAACTCAATTGTACAAATTCTCTTGTGATTGACAAGTTATCTTCTCCACTTCTTCATCCTCTTTCCTTGAAAGTTTCAAACTTTTACATTCAAATCTCTCTCTAAGAAGATCCCACCTTTTGGAGAAGCATCATCTCACCATAACATGACTTTACATGTAAATATATTGTCACCATTAGTAGTAAATCTATA TACATCCTTTTGGTTCTGTTCGTTCATTTTACAACTCCAACATTGATGAATATACGCGCTAGTGATTCATCGAAAAGGATGGTTGCCACATTATCAGGTTGAATCCCAGCTTTCCAAGTCGACATGGGGACCCTCCTGATCTTCTTCTCAAATAAGGTCATGAATTGCTCTCTCTCCCTCCACTAATTTTTCCTCTTTTGATCTGCCGACTTGAATTATCCTTGGATTTTTTTTTTTTTCCCCGTTTCTAGTTTGTTTGGGATGAATTAAGATCAAAATGGGATTTCCTGAATACCCATAATGAACTAGAAATATATCTTTTGGGATCGTGCACACAAGGTGTTTGATGTAAGTCCTGGTACTTTTTTCACCTTCAGTGTGGTGCTTACAAGCTTTTTTTGATGCTGGGTGTGTCAGAGGAGAAGAAAATAGCGGTTATATTAGACAACAGAAAGTAAGATTCACCAACAATTTTCGATCCCTTTAAATATAGTGGGAGAGCCAGAGATTGATACACTAGTCATTAAGCAAACATCTCCTCCCTGCTTCTTGCTAGTTAAGAACATCCTGGTTGAGTGGCTGTAGAGATCAAGCCACTCCTAGCAAGAGAATTTGTATAGCTGAATTTTCTTTATCATTAATCAAAGATGGAAGCTTTACTACAGAGACATGTTATTGGATTTCCAATTGGATCATCAGTTCAGAGACTCTTACCTGATCTTGCTGGCCACTACAACATTCCATCTCCAGACAGTAAATACCCAACATTAAAACAATGTAGTAAAGATTCAATGCTTAGCAGGGTGAACAAGCTTGGTAAAAGAGCTGACAGCTTTGCTCATGGAGTCCGGGAGCATGTGAAACTAGGATCCAAGATCACAGAAACTGTCAAAGGAAAGTTGAGCTTAGGAGCTAGAATTCTTCAAGTAGGTGGATTAAGAAAAATCTACAAGCAATTGTTTAATGTTGGAGATGGTGAGAAACTATTGAAGGCTGTCCACTGCTATTTGTCAACCACAGCTGGACCTATTGCAGGTCTGCTCTTCATATCCACAGCTAAGATCGCCTTCTGCAGCGACAGATCGATCAAAGTTTCTTCCCCCACCGGAGAGCTAATTCGATTCCATTACAAGGTATTGATTCCAGTAGGAAAAATAGAGAGAATCAATCAAAGTGAGAATGTGATGAAGCCTTCACAGAAGTACATGGAAATAGTTACGGTGGATAATTTTGACTTCTGGTTTATGGGGTTCTTGAATTATCGCAAAACTCTTCAATATCTTCAAGATGTGATCTATCAAGAATGCAAGAAATGCTAGATGATTTGAGGAAGATATTGCAGAAGAAATGTTCTTTGGTTCCCCTCCCCCTTTTTTATCATTTGATCACAATACAATCAACTCAATTGTACAAATTCTCTTGTGATTGACAAGTTATCTTCTCCACTTCTTCATCCTCTTTCCTTGAAAGTTTCAAACTTTTACATTCAAATCTCTCTCTAAGAAGATCCCACCTTTTGGAGAAGCATCATCTCACCATAACATGACTTTACATGTAAATATATTGTCACCATTAGTAGTAAATCTATA ATGGAAGCTTTACTACAGAGACATGTTATTGGATTTCCAATTGGATCATCAGTTCAGAGACTCTTACCTGATCTTGCTGGCCACTACAACATTCCATCTCCAGACAGTAAATACCCAACATTAAAACAATGTAGTAAAGATTCAATGCTTAGCAGGGTGAACAAGCTTGGTAAAAGAGCTGACAGCTTTGCTCATGGAGTCCGGGAGCATGTGAAACTAGGATCCAAGATCACAGAAACTGTCAAAGGAAAGTTGAGCTTAGGAGCTAGAATTCTTCAAGTAGGTGGATTAAGAAAAATCTACAAGCAATTGTTTAATGTTGGAGATGGTGAGAAACTATTGAAGGCTGTCCACTGCTATTTGTCAACCACAGCTGGACCTATTGCAGGTCTGCTCTTCATATCCACAGCTAAGATCGCCTTCTGCAGCGACAGATCGATCAAAGTTTCTTCCCCCACCGGAGAGCTAATTCGATTCCATTACAAGGTATTGATTCCAGTAGGAAAAATAGAGAGAATCAATCAAAGTGAGAATGTGATGAAGCCTTCACAGAAGTACATGGAAATAGTTACGGTGGATAATTTTGACTTCTGGTTTATGGGGTTCTTGAATTATCGCAAAACTCTTCAATATCTTCAAGATGTGATCTATCAAGAATGCAAGAAATGCTAG MEALLQRHVIGFPIGSSVQRLLPDLAGHYNIPSPDSKYPTLKQCSKDSMLSRVNKLGKRADSFAHGVREHVKLGSKITETVKGKLSLGARILQVGGLRKIYKQLFNVGDGEKLLKAVHCYLSTTAGPIAGLLFISTAKIAFCSDRSIKVSSPTGELIRFHYKVLIPVGKIERINQSENVMKPSQKYMEIVTVDNFDFWFMGFLNYRKTLQYLQDVIYQECKKC Homology
BLAST of Cp4.1LG13g05820 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 9.4e-60 Identity = 124/213 (58.22%), Postives = 150/213 (70.42%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2) HSP 1 Score: 228.8 bits (582), Expect = 6.1e-59 Identity = 122/213 (57.28%), Postives = 147/213 (69.01%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. ExPASy Swiss-Prot
Match: Q9FTA0 (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 7.9e-59 Identity = 119/215 (55.35%), Postives = 153/215 (71.16%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.5e-57 Identity = 119/216 (55.09%), Postives = 151/216 (69.91%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31 Identity = 72/189 (38.10%), Postives = 119/189 (62.96%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. NCBI nr
Match: XP_023550370.1 (GEM-like protein 7 [Cucurbita pepo subsp. pepo] >XP_023550371.1 GEM-like protein 7 [Cucurbita pepo subsp. pepo] >KAG6579083.1 putative GEM-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 449 bits (1156), Expect = 2.29e-159 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. NCBI nr
Match: XP_022938465.1 (GEM-like protein 7 isoform X2 [Cucurbita moschata]) HSP 1 Score: 446 bits (1147), Expect = 5.41e-158 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. NCBI nr
Match: XP_022993777.1 (GEM-like protein 7 isoform X2 [Cucurbita maxima]) HSP 1 Score: 446 bits (1146), Expect = 7.68e-158 Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. NCBI nr
Match: XP_022938462.1 (GEM-like protein 7 isoform X1 [Cucurbita moschata]) HSP 1 Score: 436 bits (1121), Expect = 5.97e-154 Identity = 215/218 (98.62%), Postives = 217/218 (99.54%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. NCBI nr
Match: XP_022993776.1 (GEM-like protein 7 isoform X1 [Cucurbita maxima]) HSP 1 Score: 436 bits (1120), Expect = 8.48e-154 Identity = 215/218 (98.62%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. ExPASy TrEMBL
Match: A0A6J1FJV6 (GEM-like protein 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444694 PE=3 SV=1) HSP 1 Score: 446 bits (1147), Expect = 2.62e-158 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. ExPASy TrEMBL
Match: A0A6J1JTT5 (GEM-like protein 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489685 PE=3 SV=1) HSP 1 Score: 446 bits (1146), Expect = 3.72e-158 Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. ExPASy TrEMBL
Match: A0A6J1FE38 (GEM-like protein 7 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444694 PE=3 SV=1) HSP 1 Score: 436 bits (1121), Expect = 2.89e-154 Identity = 215/218 (98.62%), Postives = 217/218 (99.54%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. ExPASy TrEMBL
Match: A0A6J1JXA1 (GEM-like protein 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489685 PE=3 SV=1) HSP 1 Score: 436 bits (1120), Expect = 4.11e-154 Identity = 215/218 (98.62%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. ExPASy TrEMBL
Match: A0A5D3CUH3 (Putative GEM-like protein 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00540 PE=3 SV=1) HSP 1 Score: 410 bits (1055), Expect = 3.58e-144 Identity = 207/230 (90.00%), Postives = 214/230 (93.04%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 231.5 bits (589), Expect = 6.7e-61 Identity = 124/213 (58.22%), Postives = 150/213 (70.42%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 228.8 bits (582), Expect = 4.3e-60 Identity = 122/213 (57.28%), Postives = 147/213 (69.01%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 228.4 bits (581), Expect = 5.6e-60 Identity = 119/215 (55.35%), Postives = 153/215 (71.16%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 224.2 bits (570), Expect = 1.1e-58 Identity = 119/216 (55.09%), Postives = 151/216 (69.91%), Query Frame = 0
BLAST of Cp4.1LG13g05820 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 138.3 bits (347), Expect = 7.7e-33 Identity = 72/189 (38.10%), Postives = 119/189 (62.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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