Cp4.1LG13g05060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g05060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	structural constituent of ribosome
Location	Cp4.1LG13: 5668568 .. 5669119 (-)
RNA-Seq Expression	Cp4.1LG13g05060
Synteny	Cp4.1LG13g05060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAGCAATAAGGTATCCTCCCTTGTCCCTAGCGATATCAACAGCGATGATTACATAGGCGTGGAGAGTTGTGTCGATTTAAAAGACCACGACACGGCAGTCGACACAACTCCCCTGGCGAGCTTCCCCGAGGGAGGAAATAGCAAGAGGGACATCAAAACGTCGTGGATGGGGAGAAAAGATCAGAAAAACTATCCCCCACCAATCCCGTTATTGGTTCGCACTGAGAATCTGGCTTCCCACATACCATGGGTAATGAAACGGCAGTACACAGGCGATGGACGGCTCATACTGACAGAGGAGAAAGTGAAACACCACGAGTTCTTCCGTGCCCACAGATCCGATGGACGCCTGATGCTACAGCTGGTGACCATGGACGACCAGGACTTGGATGAGGAGGACGATGAGGAGGTGGAGGAGGAAAGCACGGAGGCGGGAGGGAGTGAAGGGGGAAAATGGTGTAAGTATGAGAACGTAAGAGACAGAGATGCAGCGTTTATGTTCGGAGTGGAAGTGTCTGCAGGAAGCTTGAGGAGTGTTCGAGGGTAA

mRNA sequence

ATGCAGAGCAATAAGGTATCCTCCCTTGTCCCTAGCGATATCAACAGCGATGATTACATAGGCGTGGAGAGTTGTGTCGATTTAAAAGACCACGACACGGCAGTCGACACAACTCCCCTGGCGAGCTTCCCCGAGGGAGGAAATAGCAAGAGGGACATCAAAACGTCGTGGATGGGGAGAAAAGATCAGAAAAACTATCCCCCACCAATCCCGTTATTGGTTCGCACTGAGAATCTGGCTTCCCACATACCATGGGTAATGAAACGGCAGTACACAGGCGATGGACGGCTCATACTGACAGAGGAGAAAGTGAAACACCACGAGTTCTTCCGTGCCCACAGATCCGATGGACGCCTGATGCTACAGCTGGTGACCATGGACGACCAGGACTTGGATGAGGAGGACGATGAGGAGGTGGAGGAGGAAAGCACGGAGGCGGGAGGGAGTGAAGGGGGAAAATGGTGTAAGTATGAGAACGTAAGAGACAGAGATGCAGCGTTTATGTTCGGAGTGGAAGTGTCTGCAGGAAGCTTGAGGAGTGTTCGAGGGTAA

Coding sequence (CDS)

ATGCAGAGCAATAAGGTATCCTCCCTTGTCCCTAGCGATATCAACAGCGATGATTACATAGGCGTGGAGAGTTGTGTCGATTTAAAAGACCACGACACGGCAGTCGACACAACTCCCCTGGCGAGCTTCCCCGAGGGAGGAAATAGCAAGAGGGACATCAAAACGTCGTGGATGGGGAGAAAAGATCAGAAAAACTATCCCCCACCAATCCCGTTATTGGTTCGCACTGAGAATCTGGCTTCCCACATACCATGGGTAATGAAACGGCAGTACACAGGCGATGGACGGCTCATACTGACAGAGGAGAAAGTGAAACACCACGAGTTCTTCCGTGCCCACAGATCCGATGGACGCCTGATGCTACAGCTGGTGACCATGGACGACCAGGACTTGGATGAGGAGGACGATGAGGAGGTGGAGGAGGAAAGCACGGAGGCGGGAGGGAGTGAAGGGGGAAAATGGTGTAAGTATGAGAACGTAAGAGACAGAGATGCAGCGTTTATGTTCGGAGTGGAAGTGTCTGCAGGAAGCTTGAGGAGTGTTCGAGGGTAA

Protein sequence

MQSNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRKDQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDDQDLDEEDDEEVEEESTEAGGSEGGKWCKYENVRDRDAAFMFGVEVSAGSLRSVRG

Homology

[Close]

BLAST of Cp4.1LG13g05060 vs. NCBI nr
Match: XP_023551237.1 (uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370 bits (950), Expect = 3.67e-129
Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 2   QSNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRK 61
           +SNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRK
Sbjct: 10  RSNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRK 69

Query: 62  DQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 121
           DQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML
Sbjct: 70  DQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 129

Query: 122 QLVTMDDQDLDEEDDEEVEEESTEAGGSEGGKWCKYENVRDRDAAFMFGVEVSAGSLRSV 181
           QLVTMDDQDLDEEDDEEVEEESTEAGGSEGGKWCKYENVRDRDAAFMFGVEVSAGSLRSV
Sbjct: 130 QLVTMDDQDLDEEDDEEVEEESTEAGGSEGGKWCKYENVRDRDAAFMFGVEVSAGSLRSV 189

Query: 182 RG 183
           RG
Sbjct: 190 RG 191

[Close]

BLAST of Cp4.1LG13g05060 vs. NCBI nr
Match: XP_022939970.1 (uncharacterized protein LOC111445672 [Cucurbita moschata])

HSP 1 Score: 341 bits (875), Expect = 1.07e-117
Identity = 170/184 (92.39%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 2   QSNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRK 61
           +SNKVSSLVPSDINSDDYIGVESCVDLKD+DTA D TPLASFPEGGNSKRDIKTSWMGRK
Sbjct: 10  RSNKVSSLVPSDINSDDYIGVESCVDLKDNDTAADITPLASFPEGGNSKRDIKTSWMGRK 69

Query: 62  DQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 121
           DQKNYPPPIPLLVRTENL SHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML
Sbjct: 70  DQKNYPPPIPLLVRTENLGSHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 129

Query: 122 QLVTMDDQDLDEE-DDEEVEEESTEAGGSE-GGKWCKYENVRDRDAAFMFGVEVSAGSLR 181
           QLVTMDDQ+LDE+ D+EE +EE TEAGGSE GGKWCKYENVRDRDAAFMFGVEV AGSLR
Sbjct: 130 QLVTMDDQELDEDGDEEEKKEECTEAGGSEEGGKWCKYENVRDRDAAFMFGVEVGAGSLR 189

Query: 182 SVRG 183
           SVRG
Sbjct: 190 SVRG 193

[Close]

BLAST of Cp4.1LG13g05060 vs. NCBI nr
Match: XP_022992861.1 (uncharacterized protein LOC111489066 [Cucurbita maxima])

HSP 1 Score: 337 bits (865), Expect = 3.85e-116
Identity = 167/186 (89.78%), Postives = 173/186 (93.01%), Query Frame = 0


Query: 2   QSNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRK 61
           +SNKVSSLVP+DINSDDYIG+ESCVDLK H TA D TPLASFPEGGNSKRD KTSWMGRK
Sbjct: 10  RSNKVSSLVPTDINSDDYIGLESCVDLKGHHTAADITPLASFPEGGNSKRDNKTSWMGRK 69

Query: 62  DQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 121
           +QKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML
Sbjct: 70  NQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 129

Query: 122 QLVTMDDQDLDEEDDEEVEEES----TEAGGSEGGKWCKYENVRDRDAAFMFGVEVSAGS 181
           QLVTMDDQ+LDEE DEE EEE     TEAGGSEGGKWCKYENVRDRD AFMFGVEV+AGS
Sbjct: 130 QLVTMDDQELDEEGDEEEEEEEEEECTEAGGSEGGKWCKYENVRDRDTAFMFGVEVAAGS 189

Query: 182 LRSVRG 183
           LRSVRG
Sbjct: 190 LRSVRG 195

[Close]

BLAST of Cp4.1LG13g05060 vs. NCBI nr
Match: KAG6579017.1 (hypothetical protein SDJN03_23465, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 337 bits (863), Expect = 7.25e-116
Identity = 168/184 (91.30%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 2   QSNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRK 61
           +SNKVSSLVPSDINSDDYIGVESCVDLKD+DTA D TPLASFPEGGNSKRDIKTSWM RK
Sbjct: 10  RSNKVSSLVPSDINSDDYIGVESCVDLKDNDTAADITPLASFPEGGNSKRDIKTSWMERK 69

Query: 62  DQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 121
           DQKNYPPPIPLLVRTENL SHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML
Sbjct: 70  DQKNYPPPIPLLVRTENLGSHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 129

Query: 122 QLVTMDDQDLDEE-DDEEVEEESTEAGGSE-GGKWCKYENVRDRDAAFMFGVEVSAGSLR 181
           QLVTMDDQ+LDE+ D+EE +E+ TEAGGSE GGKWCKYENVRDRDAAFMFGVEV AGSLR
Sbjct: 130 QLVTMDDQELDEDGDEEEKKEKCTEAGGSEEGGKWCKYENVRDRDAAFMFGVEVGAGSLR 189

Query: 182 SVRG 183
           SVRG
Sbjct: 190 SVRG 193

[Close]

BLAST of Cp4.1LG13g05060 vs. NCBI nr
Match: KAG7016540.1 (hypothetical protein SDJN02_21649 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323 bits (828), Expect = 2.30e-110
Identity = 160/175 (91.43%), Postives = 167/175 (95.43%), Query Frame = 0


Query: 11  PSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRKDQKNYPPPI 70
           PSDINSDDYIGVESCVDLKD+DTA D +PLASFPEGGNSKRDIKTSWM RKDQKNYPPPI
Sbjct: 30  PSDINSDDYIGVESCVDLKDNDTAADISPLASFPEGGNSKRDIKTSWMERKDQKNYPPPI 89

Query: 71  PLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDDQD 130
           PLLVRTENL SHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDDQ+
Sbjct: 90  PLLVRTENLGSHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDDQE 149

Query: 131 LDEE-DDEEVEEESTEAGGSE-GGKWCKYENVRDRDAAFMFGVEVSAGSLRSVRG 183
           LDE+ D+EE +EE TEAGGSE GGKWCKYENVRDRDAAFMFGVEV+AGSLRSVRG
Sbjct: 150 LDEDGDEEEKKEECTEAGGSEEGGKWCKYENVRDRDAAFMFGVEVTAGSLRSVRG 204

[Close]

BLAST of Cp4.1LG13g05060 vs. ExPASy TrEMBL
Match: A0A6J1FP95 (uncharacterized protein LOC111445672 OS=Cucurbita moschata OX=3662 GN=LOC111445672 PE=3 SV=1)

HSP 1 Score: 341 bits (875), Expect = 5.20e-118
Identity = 170/184 (92.39%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 2   QSNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRK 61
           +SNKVSSLVPSDINSDDYIGVESCVDLKD+DTA D TPLASFPEGGNSKRDIKTSWMGRK
Sbjct: 10  RSNKVSSLVPSDINSDDYIGVESCVDLKDNDTAADITPLASFPEGGNSKRDIKTSWMGRK 69

Query: 62  DQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 121
           DQKNYPPPIPLLVRTENL SHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML
Sbjct: 70  DQKNYPPPIPLLVRTENLGSHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 129

Query: 122 QLVTMDDQDLDEE-DDEEVEEESTEAGGSE-GGKWCKYENVRDRDAAFMFGVEVSAGSLR 181
           QLVTMDDQ+LDE+ D+EE +EE TEAGGSE GGKWCKYENVRDRDAAFMFGVEV AGSLR
Sbjct: 130 QLVTMDDQELDEDGDEEEKKEECTEAGGSEEGGKWCKYENVRDRDAAFMFGVEVGAGSLR 189

Query: 182 SVRG 183
           SVRG
Sbjct: 190 SVRG 193

[Close]

BLAST of Cp4.1LG13g05060 vs. ExPASy TrEMBL
Match: A0A6J1JUP6 (uncharacterized protein LOC111489066 OS=Cucurbita maxima OX=3661 GN=LOC111489066 PE=3 SV=1)

HSP 1 Score: 337 bits (865), Expect = 1.87e-116
Identity = 167/186 (89.78%), Postives = 173/186 (93.01%), Query Frame = 0


Query: 2   QSNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRK 61
           +SNKVSSLVP+DINSDDYIG+ESCVDLK H TA D TPLASFPEGGNSKRD KTSWMGRK
Sbjct: 10  RSNKVSSLVPTDINSDDYIGLESCVDLKGHHTAADITPLASFPEGGNSKRDNKTSWMGRK 69

Query: 62  DQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 121
           +QKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML
Sbjct: 70  NQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 129

Query: 122 QLVTMDDQDLDEEDDEEVEEES----TEAGGSEGGKWCKYENVRDRDAAFMFGVEVSAGS 181
           QLVTMDDQ+LDEE DEE EEE     TEAGGSEGGKWCKYENVRDRD AFMFGVEV+AGS
Sbjct: 130 QLVTMDDQELDEEGDEEEEEEEEEECTEAGGSEGGKWCKYENVRDRDTAFMFGVEVAAGS 189

Query: 182 LRSVRG 183
           LRSVRG
Sbjct: 190 LRSVRG 195

[Close]

BLAST of Cp4.1LG13g05060 vs. ExPASy TrEMBL
Match: A0A6J1CJ12 (uncharacterized protein LOC111011804 OS=Momordica charantia OX=3673 GN=LOC111011804 PE=3 SV=1)

HSP 1 Score: 186 bits (473), Expect = 1.54e-56
Identity = 109/188 (57.98%), Postives = 131/188 (69.68%), Query Frame = 0


Query: 2   QSNKV--SSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMG 61
           QS +V  SS   SDI  DDYIG+ESCVDLK++ TA DT P     +  + + +      G
Sbjct: 33  QSQRVFPSSTRESDI--DDYIGMESCVDLKENQTAADTMPPPPPMKFSDKRENKMWGGTG 92

Query: 62  RKDQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRL 121
           RK+++ YPPPIPLLVRTENLASH+PWV+KR YTGDGRLILTEEKV+HHE+FRAHRSDGRL
Sbjct: 93  RKERE-YPPPIPLLVRTENLASHMPWVLKRHYTGDGRLILTEEKVRHHEYFRAHRSDGRL 152

Query: 122 MLQLVTMDDQDLDEEDDEEVEEESTEAGGSEGGKWCKYENV--RDRDAAFMFGVEV---S 181
           MLQLV +DD D +   D+E E+E  E GG      C    +  R RD A MFGV V   S
Sbjct: 153 MLQLVALDDGDGESGQDQEDEDEDFEKGGK---MKCLKNGIVRRRRDPALMFGVAVPALS 212

[Close]

BLAST of Cp4.1LG13g05060 vs. ExPASy TrEMBL
Match: A0A6J1JTI2 (uncharacterized protein LOC111487372 OS=Cucurbita maxima OX=3661 GN=LOC111487372 PE=3 SV=1)

HSP 1 Score: 160 bits (406), Expect = 8.08e-47
Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = 0


Query: 1   MQSNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGR 60
           MQS  +S     D + DDYIG+ESCVDL+++ TA D +       G N KRD K   M R
Sbjct: 1   MQSKSLSP-DSRDFDIDDYIGMESCVDLRENHTAADIS-------GENCKRDNKMLGMER 60

Query: 61  KDQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLM 120
           KD   YPPPI LLVRTENLAS +PWV+KR+YT DGRLILT+E+++H+EFFRAHRSDGRLM
Sbjct: 61  KDHNEYPPPIQLLVRTENLASQMPWVLKRRYTDDGRLILTDERLRHYEFFRAHRSDGRLM 120

Query: 121 LQLVTMDDQDLDEEDDEEVEEESTEAGGSEGGKWCKYENVRDRDAAFM-----FGVEVSA 180
           LQLV  DDQ  DE         + E G  +GG+  +     +   A M      G +   
Sbjct: 121 LQLVAFDDQGYDES--------NVEIGDEDGGRGEECAAAAEGSDAVMQSRLCSGCQCPQ 171

Query: 181 GSLRSVR 182
           G+L +VR
Sbjct: 181 GALSTVR 171

[Close]

BLAST of Cp4.1LG13g05060 vs. ExPASy TrEMBL
Match: A0A6J1GVY4 (uncharacterized protein LOC111458031 OS=Cucurbita moschata OX=3662 GN=LOC111458031 PE=3 SV=1)

HSP 1 Score: 157 bits (396), Expect = 2.80e-45
Identity = 93/187 (49.73%), Postives = 116/187 (62.03%), Query Frame = 0


Query: 1   MQSNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGR 60
           MQS  +S     D + DDYIG+ESCVDL ++ T+ D +       G N +RD K   M R
Sbjct: 1   MQSKSLSP-DSRDFDFDDYIGIESCVDLMENHTSSDIS-------GENCRRDNKMWGMER 60

Query: 61  KDQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLM 120
           KD   YPPPI LLVRTENLAS +PWV+KR YT DGRLILTEE+++++EFFRAHRS+GRLM
Sbjct: 61  KDHNEYPPPIQLLVRTENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFRAHRSNGRLM 120

Query: 121 LQLVTMDDQDLDEEDDEEVEEESTEAGGSEGGKWCKYENVRD-RDAAFMF----GVEVSA 180
           LQLV  DDQ  DE         + E GG +GG   +     + RDA        G +   
Sbjct: 121 LQLVAFDDQGYDES--------NVEIGGEDGGDGEECAAAAEGRDAEMQSRLCSGCQCPQ 171

Query: 181 GSLRSVR 182
           G+LR+VR
Sbjct: 181 GALRTVR 171

[Close]

BLAST of Cp4.1LG13g05060 vs. TAIR 10
Match: AT1G22110.1 (structural constituent of ribosome )

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26
Identity = 66/143 (46.15%), Postives = 85/143 (59.44%), Query Frame = 0


Query: 18  DYIGVESCVDLKDHDTAVDTTPLAS------FPEGGNSKRDIKTSWMGRKDQKNYPPPIP 77
           DYIG ESC D+   D   D   +AS      F  GG  + + +      ++   +PPPIP
Sbjct: 51  DYIGTESCFDILSADEGNDVVSVASEPVKSRFRYGGRRREEREARAAAARE---FPPPIP 110

Query: 78  LLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDD--- 137
           LL +T NL  H+PWV+KR  T DGRLIL EEKV+HHE+FRA+RS+GRL L LV +DD   
Sbjct: 111 LLAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLDDDVF 170

Query: 138 ---------QDLDEEDDEEVEEE 143
                    Q  DEEDD+E ++E
Sbjct: 171 DLPQEPSHYQSDDEEDDDECDDE 190

[Close]

BLAST of Cp4.1LG13g05060 vs. TAIR 10
Match: AT1G77932.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-15
Identity = 48/117 (41.03%), Postives = 64/117 (54.70%), Query Frame = 0


Query: 19  YIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRKDQKNYPPPIPLLVRTEN 78
           YIG ESC +     T     P     E     R+I +           PP +P       
Sbjct: 10  YIGKESCFNAFSDKTGDVKLPCERREEKKTVAREIMS-----------PPMLP------- 69

Query: 79  LASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDDQDLDEED 136
             SH+P V+KR+YT DGRL+L EEKV  +E+FRAHRS+GRLM+QLV++D+ D  + D
Sbjct: 70  --SHVPSVLKREYTSDGRLLLKEEKVCRNEYFRAHRSNGRLMIQLVSLDEDDDRDSD 106

[Close]

BLAST of Cp4.1LG13g05060 vs. TAIR 10
Match: AT5G22390.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 52.0 bits (123), Expect = 5.9e-07
Identity = 42/142 (29.58%), Postives = 64/142 (45.07%), Query Frame = 0


Query: 4   NKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRKDQ 63
           N    L    + S+ Y G+E      D D   D   +     G N + + +     RK++
Sbjct: 76  NSSLQLCTEGLGSESYYGLEDEKVNGDGDGDDDEIEVKGKDNGSNDEEEWEPR---RKER 135

Query: 64  KNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQL 123
           K YPP +  +               + Y  +GRL+L E ++   EF RA R DGRL L+L
Sbjct: 136 KEYPPAMTRM-------------SFKTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKL 195

Query: 124 VTMDDQDLDEEDDEEVEEESTE 146
           V  +D D DEE++ E ++   E
Sbjct: 196 VQPED-DHDEEEENEKDKHVDE 200

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g05060 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG13g05060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551237.1	3.67e-129	99.45	uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo]	[more]
XP_022939970.1	1.07e-117	92.39	uncharacterized protein LOC111445672 [Cucurbita moschata]	[more]
XP_022992861.1	3.85e-116	89.78	uncharacterized protein LOC111489066 [Cucurbita maxima]	[more]
KAG6579017.1	7.25e-116	91.30	hypothetical protein SDJN03_23465, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7016540.1	2.30e-110	91.43	hypothetical protein SDJN02_21649 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG13g05060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FP95	5.20e-118	92.39	uncharacterized protein LOC111445672 OS=Cucurbita moschata OX=3662 GN=LOC1114456...	[more]
A0A6J1JUP6	1.87e-116	89.78	uncharacterized protein LOC111489066 OS=Cucurbita maxima OX=3661 GN=LOC111489066...	[more]
A0A6J1CJ12	1.54e-56	57.98	uncharacterized protein LOC111011804 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1JTI2	8.08e-47	49.73	uncharacterized protein LOC111487372 OS=Cucurbita maxima OX=3661 GN=LOC111487372...	[more]
A0A6J1GVY4	2.80e-45	49.73	uncharacterized protein LOC111458031 OS=Cucurbita moschata OX=3662 GN=LOC1114580...	[more]

BLAST of Cp4.1LG13g05060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22110.1	1.5e-26	46.15	structural constituent of ribosome	[more]
AT1G77932.1	2.7e-15	41.03	Protein of unknown function (DUF3049)	[more]
AT5G22390.1	5.9e-07	29.58	Protein of unknown function (DUF3049)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 65..123 e-value: 8.7E-21 score: 73.9
IPR021410	The fantastic four family	PANTHER	PTHR33155	FANTASTIC FOUR-LIKE PROTEIN (DUF3049)	coord: 1..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..145
None	No IPR available	PANTHER	PTHR33155:SF36	SUBFAMILY NOT NAMED	coord: 1..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g05060.1	Cp4.1LG13g05060.1	mRNA