Cp4.1LG13g05000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG13g05000
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionnon-specific lipid-transfer protein-like protein At5g64080
LocationCp4.1LG13: 5709408 .. 5710636 (-)
RNA-Seq ExpressionCp4.1LG13g05000
SyntenyCp4.1LG13g05000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAAAATTTCAAAATGTGTTCATGTTAACGAACTAAACAAACACCCTAATTTCACTGAACAAGCACTATAAATCTCAATAACAATCAACATCTGAAATCAAAAAATAAAAAAAATAAATAAGATCCATTTGAAAATTCATCTCTGAAATTCTTTTTGATCCAGCACGGACGGAAAATCTCAAAGCAATGGCAATGTCGATCATTCCGAGTTTGGCTCTGTTCACGATCTGCATTGCAGCGGTTGCGGTTGCGGGTGCGACCTCGCCATCGCCGGCGCCGAGTCCGTCGGATTGCTCGGCAGTGGTGTACCAGATGATGCCGTGCGTGGAATACTTCACGATTGGGAGCCCGAAGGCGAATGCCTCTACGGATTGCTGCAAAGTGGTGAAAGATGTGATGAAATCGAAAGCCGATTGTATGTGCGATGCGTTGAAGCAGAACGGGAGAATGGGGATTCAATTGAATCGAACCAGAGCCCTCGGCCTTCCTGCCACCTGCGGAAGCCCTACTTCCCTTGCCGATTGCACCAGTGCGTTTTGTTCTTGTTTTGAAATCGATCGTAATTTTGTATTTTCTGATTTTGGGGATTTTTTGTTTTTTTGTTTTTTTTTTTTTTTTCTCTTTTTGGCAGTTGCTGTTTCTCCGGTTATGGCACCTCCTCCAGTTCCGAGTGCTAAAGCGCCGAAGCCAGCAAAAAGAGCGAAAGTGCCATCAGCAGTCCCGTGCACCAAACCGCCAAAGCCGGCTCCAAATTCAACATCCCCAACGCATGCTCCAGTTAGCCCACCAAGTCCACCAGCACCACCACCAGAATTGGTACCAGGCACAGTCCCAGTGGAGGCTCCAGCACCGTCAGACGACGACATGGGACCGTCTGGTGAGGACTCGTCGGCATCGGCTACATCTTTCACCACTTTCTCTAGCCTAATCGTGCTGCCTCTCGCCCTTCTGGCTTCATTTGGAGCTTTGTGATGCTCCTTTTTAGAAGCCATCTACGCCATTTTTGACCCGATTTTCACAATTGTCTTTTTTTCTTTTTCAATTTCCCCAATTGAAGTTGGGAAAATATTTCTTTCCTATTAAAATAATGTAGTTTCAGCGTTTCGATGGAGATATCGAATCAAGATAGAGAGTTTTATTTATTTAATTACTATTATATCGAATCCAGATAGAGAGTTTTATTTATTTAATTACTATTATATCGAATCCAGATAGAGAGTTTTATTTA

mRNA sequence

AACAAAATTTCAAAATGTGTTCATGTTAACGAACTAAACAAACACCCTAATTTCACTGAACAAGCACTATAAATCTCAATAACAATCAACATCTGAAATCAAAAAATAAAAAAAATAAATAAGATCCATTTGAAAATTCATCTCTGAAATTCTTTTTGATCCAGCACGGACGGAAAATCTCAAAGCAATGGCAATGTCGATCATTCCGAGTTTGGCTCTGTTCACGATCTGCATTGCAGCGGTTGCGGTTGCGGGTGCGACCTCGCCATCGCCGGCGCCGAGTCCGTCGGATTGCTCGGCAGTGGTGTACCAGATGATGCCGTGCGTGGAATACTTCACGATTGGGAGCCCGAAGGCGAATGCCTCTACGGATTGCTGCAAAGTGGTGAAAGATGTGATGAAATCGAAAGCCGATTGTATGTGCGATGCGTTGAAGCAGAACGGGAGAATGGGGATTCAATTGAATCGAACCAGAGCCCTCGGCCTTCCTGCCACCTGCGGAAGCCCTACTTCCCTTGCCGATTGCACCATTGCTGTTTCTCCGGTTATGGCACCTCCTCCAGTTCCGAGTGCTAAAGCGCCGAAGCCAGCAAAAAGAGCGAAAGTGCCATCAGCAGTCCCGTGCACCAAACCGCCAAAGCCGGCTCCAAATTCAACATCCCCAACGCATGCTCCAGTTAGCCCACCAAGTCCACCAGCACCACCACCAGAATTGGTACCAGGCACAGTCCCAGTGGAGGCTCCAGCACCGTCAGACGACGACATGGGACCGTCTGGTGAGGACTCGTCGGCATCGGCTACATCTTTCACCACTTTCTCTAGCCTAATCGTGCTGCCTCTCGCCCTTCTGGCTTCATTTGGAGCTTTGTGATGCTCCTTTTTAGAAGCCATCTACGCCATTTTTGACCCGATTTTCACAATTGTCTTTTTTTCTTTTTCAATTTCCCCAATTGAAGTTGGGAAAATATTTCTTTCCTATTAAAATAATGTAGTTTCAGCGTTTCGATGGAGATATCGAATCAAGATAGAGAGTTTTATTTATTTAATTACTATTATATCGAATCCAGATAGAGAGTTTTATTTATTTAATTACTATTATATCGAATCCAGATAGAGAGTTTTATTTA

Coding sequence (CDS)

ATGGCAATGTCGATCATTCCGAGTTTGGCTCTGTTCACGATCTGCATTGCAGCGGTTGCGGTTGCGGGTGCGACCTCGCCATCGCCGGCGCCGAGTCCGTCGGATTGCTCGGCAGTGGTGTACCAGATGATGCCGTGCGTGGAATACTTCACGATTGGGAGCCCGAAGGCGAATGCCTCTACGGATTGCTGCAAAGTGGTGAAAGATGTGATGAAATCGAAAGCCGATTGTATGTGCGATGCGTTGAAGCAGAACGGGAGAATGGGGATTCAATTGAATCGAACCAGAGCCCTCGGCCTTCCTGCCACCTGCGGAAGCCCTACTTCCCTTGCCGATTGCACCATTGCTGTTTCTCCGGTTATGGCACCTCCTCCAGTTCCGAGTGCTAAAGCGCCGAAGCCAGCAAAAAGAGCGAAAGTGCCATCAGCAGTCCCGTGCACCAAACCGCCAAAGCCGGCTCCAAATTCAACATCCCCAACGCATGCTCCAGTTAGCCCACCAAGTCCACCAGCACCACCACCAGAATTGGTACCAGGCACAGTCCCAGTGGAGGCTCCAGCACCGTCAGACGACGACATGGGACCGTCTGGTGAGGACTCGTCGGCATCGGCTACATCTTTCACCACTTTCTCTAGCCTAATCGTGCTGCCTCTCGCCCTTCTGGCTTCATTTGGAGCTTTGTGA

Protein sequence

MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANASTDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPVMAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPPELVPGTVPVEAPAPSDDDMGPSGEDSSASATSFTTFSSLIVLPLALLASFGAL
Homology
BLAST of Cp4.1LG13g05000 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.3e-11
Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = 0

Query: 7   PSLALFTICIAAVAVAGAT-SPSPAPSPS-DCSAVVYQMMPCVEYFTIGSPKANASTDCC 66
           P   +  + +++V+V GA+   + AP+PS DCS ++  M  C+ + + G   A     CC
Sbjct: 12  PLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCC 71

Query: 67  KVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCG-SPTSLADCTIAVSPVMAP 126
             +K V+K+ + C+C+A K +  +G+ LN T+A  LPA C     S+A C ++V+P  AP
Sbjct: 72  SGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAP 131

Query: 127 PPVPSAKAPKP 135
              P   A  P
Sbjct: 132 GLAPGVAAAGP 142

BLAST of Cp4.1LG13g05000 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 53/152 (34.87%), Postives = 72/152 (47.37%), Query Frame = 0

Query: 26  SPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANASTDCCKVVKDVMKSKADCMCDALKQN 85
           +P+P PS SDCS V+Y MM C+ Y  +GS +      CC  ++ V++    C+C  L   
Sbjct: 38  APAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSA 97

Query: 86  GRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPVMAP---PPVPSAKAPKPAKRAKVPS 145
           G MGI+LN TRAL  P  C    +   C I  S    P   P  PSA AP  +  A    
Sbjct: 98  GEMGIELNSTRALATPKACKLSIAPPHCGIITSGATTPGASPVSPSAGAPTTSPSAAKSP 157

Query: 146 AVPCTKPPK---PAPNSTSPTHAPVSPPSPPA 172
               T P     P+  + SP+ +  +  S PA
Sbjct: 158 ETSATSPSSDETPSMTAPSPSSSGTNILSVPA 189

BLAST of Cp4.1LG13g05000 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.9e-08
Identity = 43/135 (31.85%), Postives = 71/135 (52.59%), Query Frame = 0

Query: 20  AVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANASTDCCKVVKDVMKSKADCMC 79
           +V    S   A +  DCS+++  M  C+ + T GS        CC  +K V+++  +C+C
Sbjct: 11  SVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLC 70

Query: 80  DALKQNGRMGIQLNRTRALGLPATC--GSPTSLADCTIAVS---PVMAPPPVPSAKAPKP 139
           +A K +G +G+ L+ ++A  LP+ C   +P S A C ++VS   P  AP   P+A A  P
Sbjct: 71  EAFKNSGSLGLTLDLSKAASLPSVCKVAAPPS-ARCGLSVSGDPPATAPGLSPTAGAGAP 130

Query: 140 AKRAKVPSAVPCTKP 150
           A  +   +A P + P
Sbjct: 131 ALSSGANAATPVSSP 144

BLAST of Cp4.1LG13g05000 vs. ExPASy Swiss-Prot
Match: Q2PE60 (Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3702 GN=LTPG23 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-07
Identity = 64/219 (29.22%), Postives = 102/219 (46.58%), Query Frame = 0

Query: 26  SPSPAPSPS-DCSAVVYQMMPCVEYFTIGSPKANASTDCCKVVKDVMKSKADCMCDALKQ 85
           +P+P PS S DCS+V+Y M+ C+ + T+GS   + +  CC  VK V+     C+C AL+ 
Sbjct: 34  APTPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALES 93

Query: 86  NGRMGIQLNRTRALGLPATCGSPTSLADC---TIAVSPVMAPPPVPSAKAPKPAKRAKVP 145
           +  MG  L+ T+AL +P  C  P    +C   T A S  ++PP      +P  AK   + 
Sbjct: 94  SREMGFVLDDTKALAMPKICNVPID-PNCDVSTPAASTPVSPPVESPTTSPSSAKSPAIT 153

Query: 146 SAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPP------------ELVPGTVPVEA---- 205
            + P      P    +SP  +  SPP   + PP             +V  + PV+A    
Sbjct: 154 PSSPAVSHSPPPVRHSSPPVSHSSPPVSHSSPPTSRSSPAVSHSSPVVAASSPVKAVSSS 213

Query: 206 PAPSDDDMGPSGEDSSASATSFTTFSSLIVLPLALLASF 225
            A S     PS   S + ++S     S + + + +++SF
Sbjct: 214 TASSPRAASPSPSPSPSISSSGILLVSKLFIAVVMVSSF 251

BLAST of Cp4.1LG13g05000 vs. ExPASy Swiss-Prot
Match: Q9FY78 (Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3702 GN=LTPG29 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06
Identity = 43/141 (30.50%), Postives = 66/141 (46.81%), Query Frame = 0

Query: 4   SIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANASTDC 63
           S   SL L  + +++  V GA         SDC  +V  + PC+ + +IG      +  C
Sbjct: 5   STATSLLLLVLSVSSPYVHGA---------SDCDTLVITLFPCLPFISIGGTADTPTASC 64

Query: 64  CKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATC---GSPTSLADCTIAVSPV 123
           C  +K+++ +K  C+C+ LK+   +GI+LN T++  LP  C     P S  D     SP 
Sbjct: 65  CSSLKNILDTKPICLCEGLKK-APLGIKLNVTKSATLPVACKLNAPPVSACDSLPPASPP 124

Query: 124 MAPPPVPS-----AKAPKPAK 137
            A    P      A AP P+K
Sbjct: 125 TANGQAPVWGSGWAPAPSPSK 135

BLAST of Cp4.1LG13g05000 vs. NCBI nr
Match: XP_023549912.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415 bits (1066), Expect = 1.64e-145
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0

Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS 60
           MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS
Sbjct: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
           TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV
Sbjct: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPPELVPGT 180
           MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPPELVPGT
Sbjct: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPPELVPGT 180

Query: 181 VPVEAPAPSDDDMGPSGEDSSASATSFTTFSSLIVLPLALLASFGAL 227
           VPVEAPAPSDDDMGPSGEDSSASATSFTTFSSLIVLPLALLASFGAL
Sbjct: 181 VPVEAPAPSDDDMGPSGEDSSASATSFTTFSSLIVLPLALLASFGAL 227

BLAST of Cp4.1LG13g05000 vs. NCBI nr
Match: XP_022939816.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] >KAG7016532.1 Non-specific lipid-transfer protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 392 bits (1006), Expect = 2.29e-136
Identity = 217/227 (95.59%), Postives = 219/227 (96.48%), Query Frame = 0

Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS 60
           MAMSIIPSLALFTICIAAVAVAGATSPSPAPS +DCSAVVYQMMPCVEYFTIGS K+NAS
Sbjct: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
           TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV
Sbjct: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPPELVPGT 180
           MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPP EL P  
Sbjct: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPQELAPSR 180

Query: 181 VPVEAPAPSDDDMGPSGEDSSASATSFTTFSSLIVLPLALLASFGAL 227
           VPVEAPAPSDDDMGPS EDSSASATSFTT SSLIVLPLALLASFGAL
Sbjct: 181 VPVEAPAPSDDDMGPSSEDSSASATSFTTCSSLIVLPLALLASFGAL 227

BLAST of Cp4.1LG13g05000 vs. NCBI nr
Match: KAG6579009.1 (Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 386 bits (992), Expect = 3.11e-134
Identity = 215/227 (94.71%), Postives = 218/227 (96.04%), Query Frame = 0

Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS 60
           MAMSIIP+LALFTI IAAVAVAGATSPSPAPS +DCSAVVYQMMPCVEYFTIGS K+NAS
Sbjct: 1   MAMSIIPNLALFTIFIAAVAVAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
           TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV
Sbjct: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPPELVPGT 180
           MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPP EL P  
Sbjct: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPQELAPSR 180

Query: 181 VPVEAPAPSDDDMGPSGEDSSASATSFTTFSSLIVLPLALLASFGAL 227
           VPVEAPAPSDDDMGPS EDSSASATSFTT SSLIVLPLALLASFGAL
Sbjct: 181 VPVEAPAPSDDDMGPSSEDSSASATSFTTCSSLIVLPLALLASFGAL 227

BLAST of Cp4.1LG13g05000 vs. NCBI nr
Match: XP_022993468.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima])

HSP 1 Score: 384 bits (985), Expect = 3.62e-133
Identity = 213/227 (93.83%), Postives = 214/227 (94.27%), Query Frame = 0

Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS 60
           MAMSIIPSLALFTICIAAVAVAGATSPSPAPS  DCSAVVYQMMPCVEYFTIGS KANAS
Sbjct: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
           TDCCKVVKDVMKSK DCMCDALKQNGRMGIQLNRTRALGLPA CGSPTSLADCTIAVSP 
Sbjct: 61  TDCCKVVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACGSPTSLADCTIAVSPA 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPPELVPGT 180
           MA PPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTH PVSPPSPPAPPPEL P  
Sbjct: 121 MASPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHTPVSPPSPPAPPPELAPSR 180

Query: 181 VPVEAPAPSDDDMGPSGEDSSASATSFTTFSSLIVLPLALLASFGAL 227
           VPVEAPAPSDD+MGPSGEDSSASA SFTT SSLIVLPLALLASFGAL
Sbjct: 181 VPVEAPAPSDDEMGPSGEDSSASALSFTTCSSLIVLPLALLASFGAL 227

BLAST of Cp4.1LG13g05000 vs. NCBI nr
Match: XP_038875880.1 (extensin-like [Benincasa hispida])

HSP 1 Score: 180 bits (456), Expect = 1.35e-51
Identity = 142/327 (43.43%), Postives = 166/327 (50.76%), Query Frame = 0

Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS 60
           MAMS+I SL +   CI+A+A   ATSPSPAPS +DCSA  +QM+ C++Y TIGS KANAS
Sbjct: 1   MAMSMIWSLGVLVTCISAIA--SATSPSPAPSAADCSAAAFQMLTCMDYITIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
             CCKVV++VMKSK DCMCD LKQ+G+MGI LN TRA+GLPA CG  TSL DC I + P 
Sbjct: 61  NVCCKVVREVMKSKGDCMCDVLKQSGKMGIHLNLTRAIGLPAACGISTSLPDCGIPLPPG 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHA------------------ 180
           MAP PVP  KAP PA R  VP+  P TK P P P + +PT A                  
Sbjct: 121 MAPAPVPRTKAPTPAPRIVVPTPAPTTKAPAPVPRTKAPTPAQRIVVPTPAPTIKAPAPV 180

Query: 181 -------------------------PVSPPSPPAPPPELV-------------------- 227
                                    PV     P P P +V                    
Sbjct: 181 PRTKAPTPAQRIVVPTPAPTTKAPAPVPRTKAPTPAPRIVVPTPAPTTKAPTPAPTTKAP 240

BLAST of Cp4.1LG13g05000 vs. ExPASy TrEMBL
Match: A0A6J1FGX0 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata OX=3662 GN=LOC111445576 PE=4 SV=1)

HSP 1 Score: 392 bits (1006), Expect = 1.11e-136
Identity = 217/227 (95.59%), Postives = 219/227 (96.48%), Query Frame = 0

Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS 60
           MAMSIIPSLALFTICIAAVAVAGATSPSPAPS +DCSAVVYQMMPCVEYFTIGS K+NAS
Sbjct: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
           TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV
Sbjct: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPPELVPGT 180
           MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPP EL P  
Sbjct: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPQELAPSR 180

Query: 181 VPVEAPAPSDDDMGPSGEDSSASATSFTTFSSLIVLPLALLASFGAL 227
           VPVEAPAPSDDDMGPS EDSSASATSFTT SSLIVLPLALLASFGAL
Sbjct: 181 VPVEAPAPSDDDMGPSSEDSSASATSFTTCSSLIVLPLALLASFGAL 227

BLAST of Cp4.1LG13g05000 vs. ExPASy TrEMBL
Match: A0A6J1K2B1 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima OX=3661 GN=LOC111489469 PE=4 SV=1)

HSP 1 Score: 384 bits (985), Expect = 1.75e-133
Identity = 213/227 (93.83%), Postives = 214/227 (94.27%), Query Frame = 0

Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS 60
           MAMSIIPSLALFTICIAAVAVAGATSPSPAPS  DCSAVVYQMMPCVEYFTIGS KANAS
Sbjct: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
           TDCCKVVKDVMKSK DCMCDALKQNGRMGIQLNRTRALGLPA CGSPTSLADCTIAVSP 
Sbjct: 61  TDCCKVVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACGSPTSLADCTIAVSPA 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPPELVPGT 180
           MA PPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTH PVSPPSPPAPPPEL P  
Sbjct: 121 MASPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHTPVSPPSPPAPPPELAPSR 180

Query: 181 VPVEAPAPSDDDMGPSGEDSSASATSFTTFSSLIVLPLALLASFGAL 227
           VPVEAPAPSDD+MGPSGEDSSASA SFTT SSLIVLPLALLASFGAL
Sbjct: 181 VPVEAPAPSDDEMGPSGEDSSASALSFTTCSSLIVLPLALLASFGAL 227

BLAST of Cp4.1LG13g05000 vs. ExPASy TrEMBL
Match: A0A5D3DSV8 (SH3 domain-containing protein C23A1.17-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001470 PE=4 SV=1)

HSP 1 Score: 167 bits (423), Expect = 1.13e-47
Identity = 126/269 (46.84%), Postives = 153/269 (56.88%), Query Frame = 0

Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS 60
           M M +I +L+LF  CI A+A A   SPSP P   DCS +V+ ++PCV+Y TIGS KANAS
Sbjct: 1   MTMGMISNLSLFLTCIVAIASANPPSPSPGPGAGDCSVLVFHILPCVDYLTIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
             CC+V+K+ M+  A+CMCD LKQ+ +MGI LN TR +GLPA CG P SL +C IA+ P 
Sbjct: 61  QVCCEVLKNTMEPSAECMCDQLKQSDKMGIHLNITRVIGLPAACGIPISLPECDIALPPA 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAP-------------VSP- 180
               PVPS KAP PA   K P+  P T  P PAPN  +P+ AP              SP 
Sbjct: 121 ----PVPSTKAPTPAPVTKTPTPAPITNSPTPAPNKQAPSLAPNKQAPSPIPNKQAPSPT 180

Query: 181 -----PSP------PAPPPE-LVPGTVPVEAP--------APSDDDM----GPSGEDSSA 227
                PSP      P+P P  +VP   PV  P         P   D+    GPSGEDS  
Sbjct: 181 PNKQAPSPTSNKQAPSPAPTTVVPAPTPVNHPIVSPPAPEVPPSSDLTPSNGPSGEDSPT 240

BLAST of Cp4.1LG13g05000 vs. ExPASy TrEMBL
Match: A0A1S3CC53 (SH3 domain-containing protein C23A1.17-like OS=Cucumis melo OX=3656 GN=LOC103499284 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 9.17e-46
Identity = 125/278 (44.96%), Postives = 153/278 (55.04%), Query Frame = 0

Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS 60
           M M +I +L+LF  CI A+A A   SPSP P   DCS +V+ ++PCV+Y TIGS KANAS
Sbjct: 1   MTMGMISNLSLFLTCIVAIASANPPSPSPGPGAGDCSVLVFHILPCVDYLTIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
             CC+V+K+ M+  A+CMCD LKQ+ +MGI LN TR +GLPA CG P SL +C IA+ P 
Sbjct: 61  QVCCEVLKNTMEPSAECMCDQLKQSDKMGIHLNITRVVGLPAACGIPISLPECDIALPPA 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAP------VSP----PSP- 180
               PVPS KAP PA   K P+  P T  P PAPN  +P+ AP      ++P    PSP 
Sbjct: 121 ----PVPSTKAPTPAPVTKTPTPAPITNSPTPAPNKQAPSLAPNKQAPSLAPNKQAPSPI 180

Query: 181 -----PAPPPE-------------------LVPGTVPVEAP--------APSDDDM---- 227
                P+P P                    +VP   PV  P         P   D+    
Sbjct: 181 PNKQAPSPTPNKQAPSPTSNKQAPSPAPTTVVPAPTPVNHPIVSPPAPEVPPSSDLTPSN 240

BLAST of Cp4.1LG13g05000 vs. ExPASy TrEMBL
Match: A0A0A0KN80 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G396010 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 5.45e-45
Identity = 129/291 (44.33%), Postives = 156/291 (53.61%), Query Frame = 0

Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANAS 60
           M M +I +L LF  CI A+A AG  SPSP  +  DCS VV+QM+PCV+Y TIGS KANAS
Sbjct: 1   MTMGMISTLGLFLTCIVAIASAG--SPSPGSNAGDCSEVVFQMLPCVDYLTIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
             CC+V+K+ ++ + DCMCD LKQ+ +MGI LN +RA+ LPA CG  TSL DC IA++  
Sbjct: 61  LVCCEVLKNALEPRPDCMCDVLKQSDKMGIHLNNSRAIALPAACGISTSLPDCDIALTQG 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPV---------------- 180
           MAP P+PS KAP  A  AK P+  P T+ P PAP + +PT APV                
Sbjct: 121 MAPAPIPSTKAPTLAPLAKTPTLAPLTRTPTPAPLTRTPTPAPVIKTPTPAPFTRTPTPA 180

Query: 181 ------------------------SP------PSP--------PAP--PPELVPGTVPVE 227
                                   SP      PSP        PAP  PP   P   P  
Sbjct: 181 PLTKTPTPAPLTNSPTPAPNNQAPSPARNNQAPSPTPTTVASVPAPVNPPIATPPAPPAP 240

BLAST of Cp4.1LG13g05000 vs. TAIR 10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-12
Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = 0

Query: 7   PSLALFTICIAAVAVAGAT-SPSPAPSPS-DCSAVVYQMMPCVEYFTIGSPKANASTDCC 66
           P   +  + +++V+V GA+   + AP+PS DCS ++  M  C+ + + G   A     CC
Sbjct: 12  PLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCC 71

Query: 67  KVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCG-SPTSLADCTIAVSPVMAP 126
             +K V+K+ + C+C+A K +  +G+ LN T+A  LPA C     S+A C ++V+P  AP
Sbjct: 72  SGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAP 131

Query: 127 PPVPSAKAPKP 135
              P   A  P
Sbjct: 132 GLAPGVAAAGP 142

BLAST of Cp4.1LG13g05000 vs. TAIR 10
Match: AT4G08670.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 9.9e-12
Identity = 53/152 (34.87%), Postives = 72/152 (47.37%), Query Frame = 0

Query: 26  SPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANASTDCCKVVKDVMKSKADCMCDALKQN 85
           +P+P PS SDCS V+Y MM C+ Y  +GS +      CC  ++ V++    C+C  L   
Sbjct: 38  APAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSA 97

Query: 86  GRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPVMAP---PPVPSAKAPKPAKRAKVPS 145
           G MGI+LN TRAL  P  C    +   C I  S    P   P  PSA AP  +  A    
Sbjct: 98  GEMGIELNSTRALATPKACKLSIAPPHCGIITSGATTPGASPVSPSAGAPTTSPSAAKSP 157

Query: 146 AVPCTKPPK---PAPNSTSPTHAPVSPPSPPA 172
               T P     P+  + SP+ +  +  S PA
Sbjct: 158 ETSATSPSSDETPSMTAPSPSSSGTNILSVPA 189

BLAST of Cp4.1LG13g05000 vs. TAIR 10
Match: AT5G64080.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.4e-11
Identity = 47/148 (31.76%), Postives = 77/148 (52.03%), Query Frame = 0

Query: 7   PSLALFTICIAAVAVAGAT-SPSPAPSPS-DCSAVVYQMMPCVEYFTIGSPKANASTDCC 66
           P   +  + +++V+V GA+   + AP+PS DCS ++  M  C+ + + G   A     CC
Sbjct: 12  PLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCC 71

Query: 67  KVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCG-SPTSLADCTIAVSPVMAP 126
             +K V+K+ + C+C+A K +  +G+ LN T+A  LPA C     S+A C ++V+P  AP
Sbjct: 72  SGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAP 131

Query: 127 ------PPVPSAKAPKPAKRAKVPSAVP 146
                 P      AP P+      S +P
Sbjct: 132 GVAAAGPETAGFLAPNPSSGNDGSSLIP 159

BLAST of Cp4.1LG13g05000 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-09
Identity = 43/135 (31.85%), Postives = 71/135 (52.59%), Query Frame = 0

Query: 20  AVAGATSPSPAPSPSDCSAVVYQMMPCVEYFTIGSPKANASTDCCKVVKDVMKSKADCMC 79
           +V    S   A +  DCS+++  M  C+ + T GS        CC  +K V+++  +C+C
Sbjct: 11  SVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLC 70

Query: 80  DALKQNGRMGIQLNRTRALGLPATC--GSPTSLADCTIAVS---PVMAPPPVPSAKAPKP 139
           +A K +G +G+ L+ ++A  LP+ C   +P S A C ++VS   P  AP   P+A A  P
Sbjct: 71  EAFKNSGSLGLTLDLSKAASLPSVCKVAAPPS-ARCGLSVSGDPPATAPGLSPTAGAGAP 130

Query: 140 AKRAKVPSAVPCTKP 150
           A  +   +A P + P
Sbjct: 131 ALSSGANAATPVSSP 144

BLAST of Cp4.1LG13g05000 vs. TAIR 10
Match: AT1G36150.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08
Identity = 64/219 (29.22%), Postives = 102/219 (46.58%), Query Frame = 0

Query: 26  SPSPAPSPS-DCSAVVYQMMPCVEYFTIGSPKANASTDCCKVVKDVMKSKADCMCDALKQ 85
           +P+P PS S DCS+V+Y M+ C+ + T+GS   + +  CC  VK V+     C+C AL+ 
Sbjct: 34  APTPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALES 93

Query: 86  NGRMGIQLNRTRALGLPATCGSPTSLADC---TIAVSPVMAPPPVPSAKAPKPAKRAKVP 145
           +  MG  L+ T+AL +P  C  P    +C   T A S  ++PP      +P  AK   + 
Sbjct: 94  SREMGFVLDDTKALAMPKICNVPID-PNCDVSTPAASTPVSPPVESPTTSPSSAKSPAIT 153

Query: 146 SAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPP------------ELVPGTVPVEA---- 205
            + P      P    +SP  +  SPP   + PP             +V  + PV+A    
Sbjct: 154 PSSPAVSHSPPPVRHSSPPVSHSSPPVSHSSPPTSRSSPAVSHSSPVVAASSPVKAVSSS 213

Query: 206 PAPSDDDMGPSGEDSSASATSFTTFSSLIVLPLALLASF 225
            A S     PS   S + ++S     S + + + +++SF
Sbjct: 214 TASSPRAASPSPSPSPSISSSGILLVSKLFIAVVMVSSF 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8VYI96.3e-1133.59Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3... [more]
Q2PE701.4e-1034.87Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=37... [more]
Q9ZQI82.9e-0831.85Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3... [more]
Q2PE601.9e-0729.22Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3... [more]
Q9FY782.1e-0630.50Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3... [more]
Match NameE-valueIdentityDescription
XP_023549912.11.64e-145100.00non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita pepo subsp... [more]
XP_022939816.12.29e-13695.59non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] ... [more]
KAG6579009.13.11e-13494.71Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperm... [more]
XP_022993468.13.62e-13393.83non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima][more]
XP_038875880.11.35e-5143.43extensin-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1FGX01.11e-13695.59non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata... [more]
A0A6J1K2B11.75e-13393.83non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima O... [more]
A0A5D3DSV81.13e-4746.84SH3 domain-containing protein C23A1.17-like OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CC539.17e-4644.96SH3 domain-containing protein C23A1.17-like OS=Cucumis melo OX=3656 GN=LOC103499... [more]
A0A0A0KN805.45e-4544.33AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G396010 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT5G64080.14.5e-1233.59Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT4G08670.19.9e-1234.87Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT5G64080.26.4e-1131.76Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT2G13820.12.1e-0931.85Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G36150.11.3e-0829.22Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 36..113
e-value: 6.8E-6
score: 35.6
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 16..113
e-value: 2.8E-13
score: 49.8
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 33..113
e-value: 1.1E-12
score: 49.7
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 35..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..205
NoneNo IPR availablePANTHERPTHR33044:SF189LIPID TRANSFER PROTEINcoord: 11..197
NoneNo IPR availableCDDcd00010AAI_LTSScoord: 43..105
e-value: 4.47154E-10
score: 52.0439
IPR043325Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) ProteinPANTHERPTHR33044BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATEDcoord: 11..197

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g05000.1Cp4.1LG13g05000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0005886 plasma membrane