Cp4.1LG13g04850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g04850
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor MYB62-like
Location	Cp4.1LG13: 5912159 .. 5913380 (+)
RNA-Seq Expression	Cp4.1LG13g04850
Synteny	Cp4.1LG13g04850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTTTTTTTTTTTTTTAAATAATAATTAAATTAGTAAAGGGTATTATTAAAATGAATTGGGTAAATTTGATAAGAAAATTCCATCAAATTTAAGCACAAAAAGGAAGGAAAATGTGATGAAATTCTCCCACCTCTCTCTCCCAATCTCTATAAATCTCTCCCACTGCTGTCTCTCTCTCTCCCATTCAAATCAGCACATAAAAATCCTTTCTTTCTCTGTGTTCTTGGTGTCTCCATGGAAGGTGTTGGAAGAAGTGAGCTGCGAAGAGGCCCATGGACCATTGAAGAAGACACTCTCCTCATTCACTATATTGCTTCTCATGGTGAAGGGCATTGGAACAATTTAGCCAAACATGCAGGTCCTTTTTGCAAAAACAAAAGTTTACCCTGTTTCTATTTCCACCCTCTCTTATTCTTCTTCTTCCTCCTCCTCCTCCTCTAGGCCTTGAGAGAACCGGAAAAAGTTGCAGGTTGAGATGGCTGAATTACTTAAAACCCGACATCAAACGTGGGAATCTCACTCCTCAAGAACAGCTCCTCATCCTCCAACTCCATTCCAAATGGGGCAACCGGTACGAAACCGTTTTGATTCGAAAAATTAATTTTTTTCTACTCGTATTGATGGAAGAATCAAAGAACTTGAAAGTTGTTTGTTCGTGTGTATTTGTTGTTGACTTGTAGATGGTCAAAGATTGCACAACAATTACCGGGAAGAACAGATAATGAGATAAAAAATTACTGGAGGACGCGGGTACAAAAACAAGCAAAACAGCTCAACATCGAATCAAACAGCGAAAAATTCTTGGAGACAGTTCGTCATTTGTGGATTCCGAGGTTGCTTCAAGAAATGGACCAAAGATCATCATCAACTTCGTTTAACTACAATTCTCCATCTTTGGAGAGCTTCTCACAAGCTCTCCAGCAGAACCCATCTGGTTCATCCGCCATTGAAGCCAACCAGAGCTCAATTCAGAGCTCTGGGGTTTATTATCAATGGCCAGAGTCCTCTGAAAGTGTTTCAGAAGAGTTTGGGAATAATTCTGATCTGCAGCCACTGGATAATGGTGAGCTTCAGGTGGACCAGCTACAACACCCATTCTCTTTGTTGGGTGCTGCTTGTGGAGTTGCAGAGTTTGATGGCCAAATGGCTGCATCTTATTGGGTGTTGGAGGATGATGTGGCAGAGACCTTTTGGAATTTGGAAAATTGTTTGTAG

mRNA sequence

TTTTTTTTTTTTTTTTTTTTTTAAATAATAATTAAATTAGTAAAGGGTATTATTAAAATGAATTGGGTAAATTTGATAAGAAAATTCCATCAAATTTAAGCACAAAAAGGAAGGAAAATGTGATGAAATTCTCCCACCTCTCTCTCCCAATCTCTATAAATCTCTCCCACTGCTGTCTCTCTCTCTCCCATTCAAATCAGCACATAAAAATCCTTTCTTTCTCTGTGTTCTTGGTGTCTCCATGGAAGGTGTTGGAAGAAGTGAGCTGCGAAGAGGCCCATGGACCATTGAAGAAGACACTCTCCTCATTCACTATATTGCTTCTCATGGTGAAGGGCATTGGAACAATTTAGCCAAACATGCAGATTGCACAACAATTACCGGGAAGAACAGATAATGAGATAAAAAATTACTGGAGGACGCGGGTACAAAAACAAGCAAAACAGCTCAACATCGAATCAAACAGCGAAAAATTCTTGGAGACAGTTCGTCATTTGTGGATTCCGAGGTTGCTTCAAGAAATGGACCAAAGATCATCATCAACTTCGTTTAACTACAATTCTCCATCTTTGGAGAGCTTCTCACAAGCTCTCCAGCAGAACCCATCTGGTTCATCCGCCATTGAAGCCAACCAGAGCTCAATTCAGAGCTCTGGGGTTTATTATCAATGGCCAGAGTCCTCTGAAAGTGTTTCAGAAGAGTTTGGGAATAATTCTGATCTGCAGCCACTGGATAATGGTGAGCTTCAGGTGGACCAGCTACAACACCCATTCTCTTTGTTGGGTGCTGCTTGTGGAGTTGCAGAGTTTGATGGCCAAATGGCTGCATCTTATTGGGTGTTGGAGGATGATGTGGCAGAGACCTTTTGGAATTTGGAAAATTGTTTGTAG

Coding sequence (CDS)

ATGCAGATTGCACAACAATTACCGGGAAGAACAGATAATGAGATAAAAAATTACTGGAGGACGCGGGTACAAAAACAAGCAAAACAGCTCAACATCGAATCAAACAGCGAAAAATTCTTGGAGACAGTTCGTCATTTGTGGATTCCGAGGTTGCTTCAAGAAATGGACCAAAGATCATCATCAACTTCGTTTAACTACAATTCTCCATCTTTGGAGAGCTTCTCACAAGCTCTCCAGCAGAACCCATCTGGTTCATCCGCCATTGAAGCCAACCAGAGCTCAATTCAGAGCTCTGGGGTTTATTATCAATGGCCAGAGTCCTCTGAAAGTGTTTCAGAAGAGTTTGGGAATAATTCTGATCTGCAGCCACTGGATAATGGTGAGCTTCAGGTGGACCAGCTACAACACCCATTCTCTTTGTTGGGTGCTGCTTGTGGAGTTGCAGAGTTTGATGGCCAAATGGCTGCATCTTATTGGGTGTTGGAGGATGATGTGGCAGAGACCTTTTGGAATTTGGAAAATTGTTTGTAG

Protein sequence

MQIAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSSTSFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQPLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWNLENCL

Homology

[Close]

BLAST of Cp4.1LG13g04850 vs. ExPASy Swiss-Prot
Match: Q9C9G7 (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 2   QIAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSS 61
           +IAQ LPGRTDNEIKNYWRTRVQKQA+QLNIESNS+KF + VR  W+PRL+++M+Q SS+
Sbjct: 98  KIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDKFFDAVRSFWVPRLIEKMEQNSST 157

Query: 62  TSF-----NYNSPSL-------ESFSQALQQNPSGSSAIEANQSS 95
           T+      N N+ SL       +S S     + SG S I+ + S+
Sbjct: 158 TTTYCCPQNNNNNSLLLPSQSHDSLSMQKDIDYSGFSNIDGSSST 202

[Close]

BLAST of Cp4.1LG13g04850 vs. ExPASy Swiss-Prot
Match: Q2QZJ8 (Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.3e-15
Identity = 59/177 (33.33%), Postives = 95/177 (53.67%), Query Frame = 0


Query: 2   QIAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSS 61
           +IAQ LPGRTDNEIKNYWRTRVQK AKQLN + NS++F + +++LW+PRL + +  R+ +
Sbjct: 108 KIAQHLPGRTDNEIKNYWRTRVQKHAKQLNCDVNSKRFKDAMKYLWMPRLAERIHARAGA 167

Query: 62  T--SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNS 121
              S +Y++  L   S       + ++  + + S + SS       ES +        + 
Sbjct: 168 VDDSGDYSNNDLSCVSGVTM--ATVANCFDGSPSMVTSSSSDSFTSESQDLKKINLHVHG 227

Query: 122 DLQPLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWV--LEDDVAETFWNLEN 175
           D + + N E  + ++ H F          +F  Q   + WV    + ++ET W+LE+
Sbjct: 228 DDEKM-NSEDWMQEVDHEFWSTEIQPNNEQFQDQQ-LNGWVQGFSEGLSETLWSLED 280

[Close]

BLAST of Cp4.1LG13g04850 vs. ExPASy Swiss-Prot
Match: Q9LDE1 (Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-14
Identity = 53/161 (32.92%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 2   QIAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSS 61
           +IAQ LPGRTDNEIKNYWRTRVQK AKQL  + NS++F +T+++LW+PRL++ +   S+S
Sbjct: 98  KIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQSASAS 157

Query: 62  TSFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFG--NNS 121
                      S + A     + + +   +     S+  +  +  ++ ++ ++FG  +N+
Sbjct: 158 -----------SAAAATTTTTTTTGSAGTSSCITTSNNQFMNYDYNNNNMGQQFGVMSNN 217

Query: 122 DLQPLDNGELQVDQLQHPFSLLGAACGVAE-FDGQMAASYW 160
           D    +N  + V           A     E + GQM  SY+
Sbjct: 218 DYITPENSSVAVSPASDLTEYYSAPNPNPEYYSGQMGNSYY 247

[Close]

BLAST of Cp4.1LG13g04850 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-14
Identity = 35/54 (64.81%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 2   QIAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEM 56
           +IAQ LPGRTDNEIKNYWRTRVQK AKQL  + NS++F + +R+LW+PRL++ +
Sbjct: 99  KIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDVMRYLWMPRLVERI 152

[Close]

BLAST of Cp4.1LG13g04850 vs. ExPASy Swiss-Prot
Match: Q9FGY3 (Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.7e-14
Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 0


Query: 2   QIAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRS-- 61
           +IAQ LPGRTDNEIKNYWRTRVQK AKQL  + NS++F +T+++LW+PRL++ +   S  
Sbjct: 105 KIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASIG 164

Query: 62  ----------SSTSFNYNSPSLESFSQ-ALQQNPSGSSAIEANQSSIQSSGV 101
                     SS  F  N+ +  +    AL  NP+G   I  + SS+  S V
Sbjct: 165 SVSMSSCVTTSSDQFVINNNNTNNVDNLALMSNPNG--YITPDNSSVAVSPV 214

[Close]

BLAST of Cp4.1LG13g04850 vs. NCBI nr
Match: XP_023551169.1 (transcription factor MYB62-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343 bits (881), Expect = 1.10e-117
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 3   IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 62
           IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST
Sbjct: 89  IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 148

Query: 63  SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ 122
           SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ
Sbjct: 149 SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ 208

Query: 123 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWNLENCL 176
           PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWNLENCL
Sbjct: 209 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWNLENCL 262

[Close]

BLAST of Cp4.1LG13g04850 vs. NCBI nr
Match: AXF54216.1 (MYB13 [Cucurbita pepo])

HSP 1 Score: 333 bits (853), Expect = 7.17e-113
Identity = 170/174 (97.70%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 3   IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 62
           IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST
Sbjct: 126 IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 185

Query: 63  SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ 122
           SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ
Sbjct: 186 SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ 245

Query: 123 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWNLENCL 176
           PLDNG+LQVDQLQHPFSLLGAA GVAEFDGQMAA+ WVLEDDVAETFWNLENCL
Sbjct: 246 PLDNGDLQVDQLQHPFSLLGAAGGVAEFDGQMAAADWVLEDDVAETFWNLENCL 299

[Close]

BLAST of Cp4.1LG13g04850 vs. NCBI nr
Match: KAG6578975.1 (Transcription factor MYB62, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327 bits (837), Expect = 5.51e-111
Identity = 167/174 (95.98%), Postives = 169/174 (97.13%), Query Frame = 0


Query: 3   IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 62
           IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIE NSEKFLETVRHLWIPRLLQEMDQRSSST
Sbjct: 89  IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIELNSEKFLETVRHLWIPRLLQEMDQRSSST 148

Query: 63  SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ 122
           SFN+NSPSLESFSQ L QNPSGSSAIEANQSSIQSSGVYYQW ESSESVSEEFGNNSDLQ
Sbjct: 149 SFNFNSPSLESFSQDLLQNPSGSSAIEANQSSIQSSGVYYQWAESSESVSEEFGNNSDLQ 208

Query: 123 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWNLENCL 176
           PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAA+ WVLEDDVAETFWNLENCL
Sbjct: 209 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAAADWVLEDDVAETFWNLENCL 262

[Close]

BLAST of Cp4.1LG13g04850 vs. NCBI nr
Match: KAG7016499.1 (Transcription factor MYB62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327 bits (837), Expect = 5.51e-111
Identity = 167/174 (95.98%), Postives = 169/174 (97.13%), Query Frame = 0


Query: 3   IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 62
           IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIE NSEKFLETVRHLWIPRLLQEMDQRSSST
Sbjct: 89  IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIELNSEKFLETVRHLWIPRLLQEMDQRSSST 148

Query: 63  SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ 122
           SFN+NSPSLESFSQ L QNPSGSSAIEANQSSIQSSGVYYQW ESSESVSEEFGNNSDLQ
Sbjct: 149 SFNFNSPSLESFSQDLLQNPSGSSAIEANQSSIQSSGVYYQWAESSESVSEEFGNNSDLQ 208

Query: 123 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWNLENCL 176
           PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAA+ WVLEDDVAETFWNLENCL
Sbjct: 209 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAAADWVLEDDVAETFWNLENCL 262

[Close]

BLAST of Cp4.1LG13g04850 vs. NCBI nr
Match: XP_022993827.1 (transcription factor MYB62-like [Cucurbita maxima])

HSP 1 Score: 326 bits (836), Expect = 7.82e-111
Identity = 166/174 (95.40%), Postives = 168/174 (96.55%), Query Frame = 0


Query: 3   IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 62
           IAQQLPGRTDNEIKNYWRTRVQKQAKQLNI+SNS+KFLETVRHLWIPRLLQEMDQRSSST
Sbjct: 89  IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIQSNSKKFLETVRHLWIPRLLQEMDQRSSST 148

Query: 63  SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ 122
           SFNYNSPS ESFSQALQQNPSGSSAIEANQSSIQSSG YYQWPESSESVSEEFGNNSDLQ
Sbjct: 149 SFNYNSPSSESFSQALQQNPSGSSAIEANQSSIQSSGAYYQWPESSESVSEEFGNNSDLQ 208

Query: 123 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWNLENCL 176
           PLDNGELQVDQ QHPFSLLGAACGVAEFDGQM AS WVLEDDVAET WNLENCL
Sbjct: 209 PLDNGELQVDQQQHPFSLLGAACGVAEFDGQMDASDWVLEDDVAETLWNLENCL 262

[Close]

BLAST of Cp4.1LG13g04850 vs. ExPASy TrEMBL
Match: A0A345BTF9 (MYB13 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 333 bits (853), Expect = 3.47e-113
Identity = 170/174 (97.70%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 3   IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 62
           IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST
Sbjct: 126 IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 185

Query: 63  SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ 122
           SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ
Sbjct: 186 SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ 245

Query: 123 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWNLENCL 176
           PLDNG+LQVDQLQHPFSLLGAA GVAEFDGQMAA+ WVLEDDVAETFWNLENCL
Sbjct: 246 PLDNGDLQVDQLQHPFSLLGAAGGVAEFDGQMAAADWVLEDDVAETFWNLENCL 299

[Close]

BLAST of Cp4.1LG13g04850 vs. ExPASy TrEMBL
Match: A0A6J1JTY6 (transcription factor MYB62-like OS=Cucurbita maxima OX=3661 GN=LOC111489723 PE=4 SV=1)

HSP 1 Score: 326 bits (836), Expect = 3.79e-111
Identity = 166/174 (95.40%), Postives = 168/174 (96.55%), Query Frame = 0


Query: 3   IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 62
           IAQQLPGRTDNEIKNYWRTRVQKQAKQLNI+SNS+KFLETVRHLWIPRLLQEMDQRSSST
Sbjct: 89  IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIQSNSKKFLETVRHLWIPRLLQEMDQRSSST 148

Query: 63  SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ 122
           SFNYNSPS ESFSQALQQNPSGSSAIEANQSSIQSSG YYQWPESSESVSEEFGNNSDLQ
Sbjct: 149 SFNYNSPSSESFSQALQQNPSGSSAIEANQSSIQSSGAYYQWPESSESVSEEFGNNSDLQ 208

Query: 123 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWNLENCL 176
           PLDNGELQVDQ QHPFSLLGAACGVAEFDGQM AS WVLEDDVAET WNLENCL
Sbjct: 209 PLDNGELQVDQQQHPFSLLGAACGVAEFDGQMDASDWVLEDDVAETLWNLENCL 262

[Close]

BLAST of Cp4.1LG13g04850 vs. ExPASy TrEMBL
Match: A0A6J1FLQ0 (transcription factor MYB62-like OS=Cucurbita moschata OX=3662 GN=LOC111445355 PE=4 SV=1)

HSP 1 Score: 323 bits (829), Expect = 4.41e-110
Identity = 165/174 (94.83%), Postives = 168/174 (96.55%), Query Frame = 0


Query: 3   IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 62
           IAQQLPGRTDNEIKNYWRTR+QKQAKQLNIE NSEKFLETVRHLWIPRLLQEMDQRSSST
Sbjct: 89  IAQQLPGRTDNEIKNYWRTRIQKQAKQLNIELNSEKFLETVRHLWIPRLLQEMDQRSSST 148

Query: 63  SFNYNSPSLESFSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGNNSDLQ 122
           SFN+NSPSLESFSQ L QNPSGSSAIEANQSSIQSSGVYYQW ESSESVSEEFGNNSDLQ
Sbjct: 149 SFNFNSPSLESFSQHLLQNPSGSSAIEANQSSIQSSGVYYQWAESSESVSEEFGNNSDLQ 208

Query: 123 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWNLENCL 176
           PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAA+ WVL DDVAETFWNLENCL
Sbjct: 209 PLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAAADWVLGDDVAETFWNLENCL 262

[Close]

BLAST of Cp4.1LG13g04850 vs. ExPASy TrEMBL
Match: A0A0A0KC91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040640 PE=4 SV=1)

HSP 1 Score: 229 bits (583), Expect = 2.30e-72
Identity = 131/182 (71.98%), Postives = 144/182 (79.12%), Query Frame = 0


Query: 3   IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSS- 62
           IAQQLPGRTDNEIKNYWRTRV+KQAKQLNIESNS+KFLETVR LWIPRLLQ+MDQ+SSS 
Sbjct: 106 IAQQLPGRTDNEIKNYWRTRVEKQAKQLNIESNSKKFLETVRDLWIPRLLQKMDQKSSSP 165

Query: 63  TSFNYNSPSLESFSQALQQNPSGSSA----IEANQSSIQSSGVYYQWPESSESVSEEFGN 122
            S NY+ P   S  +   QN  GSS+    IEA Q+SIQS G YYQWPESSE  SEEFGN
Sbjct: 166 NSSNYSPPP--SLEETFYQNSCGSSSSEATIEAKQTSIQSCGGYYQWPESSERASEEFGN 225

Query: 123 NSDLQPLDN---GE-LQVDQLQ----HPFSLLGAACGVAEFDGQMAASYWVLEDDVAETF 171
           NSD+QPL+N   GE L VDQLQ    HPFSLLGA CG AEFDGQMAAS WVL+DD +E+ 
Sbjct: 226 NSDVQPLNNNNNGEFLHVDQLQIQLQHPFSLLGATCGGAEFDGQMAASDWVLQDDKSESL 285

[Close]

BLAST of Cp4.1LG13g04850 vs. ExPASy TrEMBL
Match: A0A5A7VC63 (Transcription factor MYB108-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold569G00030 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 3.52e-69
Identity = 122/174 (70.11%), Postives = 136/174 (78.16%), Query Frame = 0


Query: 3   IAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSST 62
           IAQQLPGRTDNEIKNYWRTRV+KQAKQLNIESNS+KFLETVR LWIP LLQ+MDQ+ SS 
Sbjct: 103 IAQQLPGRTDNEIKNYWRTRVEKQAKQLNIESNSKKFLETVRDLWIPMLLQKMDQKPSSP 162

Query: 63  SFNYNSPSLESFSQALQQNPSGSSA----IEANQSSIQSSGVYYQWPESSESVSEEFGNN 122
           S +  SP   S  +   QN  GSS+    IEA Q+SIQS G YYQWPES   VSEEF NN
Sbjct: 163 SSSNYSPL--SLGETFYQNSCGSSSSEHTIEAKQNSIQSCGGYYQWPESYARVSEEFENN 222

Query: 123 SDLQPLDNGE-LQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVAETFWN 171
           SD++  +NG  LQ+DQLQHPFSLLGA CG AEFDG M AS WV +DDV+ETFWN
Sbjct: 223 SDVRNNNNGGFLQMDQLQHPFSLLGATCGGAEFDGHMVASDWVFQDDVSETFWN 274

[Close]

BLAST of Cp4.1LG13g04850 vs. TAIR 10
Match: AT1G68320.1 (myb domain protein 62 )

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-20
Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 2   QIAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSS 61
           +IAQ LPGRTDNEIKNYWRTRVQKQA+QLNIESNS+KF + VR  W+PRL+++M+Q SS+
Sbjct: 98  KIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDKFFDAVRSFWVPRLIEKMEQNSST 157

Query: 62  TSF-----NYNSPSL-------ESFSQALQQNPSGSSAIEANQSS 95
           T+      N N+ SL       +S S     + SG S I+ + S+
Sbjct: 158 TTTYCCPQNNNNNSLLLPSQSHDSLSMQKDIDYSGFSNIDGSSST 202

[Close]

BLAST of Cp4.1LG13g04850 vs. TAIR 10
Match: AT1G25340.1 (myb domain protein 116 )

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-17
Identity = 62/178 (34.83%), Postives = 96/178 (53.93%), Query Frame = 0


Query: 2   QIAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSS 61
           +I++ LPGRTDN+IKNYWRTRVQKQA+QLNI+SNS KF+E VR  W PRL+ E+   S +
Sbjct: 97  KISKYLPGRTDNDIKNYWRTRVQKQARQLNIDSNSHKFIEVVRSFWFPRLINEIKDNSYT 156

Query: 62  TSFNYNSPSLES----FSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGN 121
            +   N+P L       S+ L  N    S   +      S  + +   E++ S+    G 
Sbjct: 157 NNIKANAPDLLGPILRDSKDLGFNNMDCSTSMSEDLKKTSQFMDFSDLETTMSLEGSRGG 216

Query: 122 NSDLQPLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVA-ETFWNLEN 175
           +S             + ++  +++G++   A  D  +A S +  EDDV  +  WN+++
Sbjct: 217 SSQCVSEVYSSFPCLEEEYMVAVMGSSDISALHDCHVADSKY--EDDVTQDLMWNMDD 272

[Close]

BLAST of Cp4.1LG13g04850 vs. TAIR 10
Match: AT1G25340.2 (myb domain protein 116 )

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-17
Identity = 62/178 (34.83%), Postives = 96/178 (53.93%), Query Frame = 0


Query: 2   QIAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSS 61
           +I++ LPGRTDN+IKNYWRTRVQKQA+QLNI+SNS KF+E VR  W PRL+ E+   S +
Sbjct: 92  KISKYLPGRTDNDIKNYWRTRVQKQARQLNIDSNSHKFIEVVRSFWFPRLINEIKDNSYT 151

Query: 62  TSFNYNSPSLES----FSQALQQNPSGSSAIEANQSSIQSSGVYYQWPESSESVSEEFGN 121
            +   N+P L       S+ L  N    S   +      S  + +   E++ S+    G 
Sbjct: 152 NNIKANAPDLLGPILRDSKDLGFNNMDCSTSMSEDLKKTSQFMDFSDLETTMSLEGSRGG 211

Query: 122 NSDLQPLDNGELQVDQLQHPFSLLGAACGVAEFDGQMAASYWVLEDDVA-ETFWNLEN 175
           +S             + ++  +++G++   A  D  +A S +  EDDV  +  WN+++
Sbjct: 212 SSQCVSEVYSSFPCLEEEYMVAVMGSSDISALHDCHVADSKY--EDDVTQDLMWNMDD 267

[Close]

BLAST of Cp4.1LG13g04850 vs. TAIR 10
Match: AT1G48000.1 (myb domain protein 112 )

HSP 1 Score: 82.0 bits (201), Expect = 5.2e-16
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 2   QIAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSS 61
           +IAQ LPGRTDNEIKNYWRTRVQK AK L  + NS++F +T++HLW+PRL++ +   + S
Sbjct: 111 KIAQHLPGRTDNEIKNYWRTRVQKHAKLLKCDVNSKQFKDTIKHLWMPRLIERI-AATQS 170

Query: 62  TSFNYNSPSLESFSQALQQNPSGSSAIEANQSS 95
             F  N  S E+ S A   + + SS  EA +SS
Sbjct: 171 VQFTSNHYSPENSSVATATSSTSSS--EAVRSS 200

[Close]

BLAST of Cp4.1LG13g04850 vs. TAIR 10
Match: AT2G47190.1 (myb domain protein 2 )

HSP 1 Score: 82.0 bits (201), Expect = 5.2e-16
Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = 0


Query: 2   QIAQQLPGRTDNEIKNYWRTRVQKQAKQLNIESNSEKFLETVRHLWIPRLLQEMDQRSSS 61
           +IAQ LPGRTDNEIKNYWRTRVQKQAK L  + NS  F ET+R++W+PRL++ ++ +S  
Sbjct: 99  KIAQYLPGRTDNEIKNYWRTRVQKQAKHLRCDVNSNLFKETMRNVWMPRLVERINAQSLP 158

Query: 62  TS 64
           T+
Sbjct: 159 TT 160

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g04850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9G7	2.2e-19	53.33	Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1	[more]
Q2QZJ8	3.3e-15	33.33	Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=...	[more]
Q9LDE1	2.1e-14	32.92	Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1	[more]
Q10MB4	2.1e-14	64.81	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]
Q9FGY3	4.7e-14	44.64	Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=1 SV=1	[more]

BLAST of Cp4.1LG13g04850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551169.1	1.10e-117	100.00	transcription factor MYB62-like [Cucurbita pepo subsp. pepo]	[more]
AXF54216.1	7.17e-113	97.70	MYB13 [Cucurbita pepo]	[more]
KAG6578975.1	5.51e-111	95.98	Transcription factor MYB62, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7016499.1	5.51e-111	95.98	Transcription factor MYB62, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022993827.1	7.82e-111	95.40	transcription factor MYB62-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG13g04850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A345BTF9	3.47e-113	97.70	MYB13 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
A0A6J1JTY6	3.79e-111	95.40	transcription factor MYB62-like OS=Cucurbita maxima OX=3661 GN=LOC111489723 PE=4...	[more]
A0A6J1FLQ0	4.41e-110	94.83	transcription factor MYB62-like OS=Cucurbita moschata OX=3662 GN=LOC111445355 PE...	[more]
A0A0A0KC91	2.30e-72	71.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040640 PE=4 SV=1	[more]
A0A5A7VC63	3.52e-69	70.11	Transcription factor MYB108-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Cp4.1LG13g04850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68320.1	1.5e-20	53.33	myb domain protein 62	[more]
AT1G25340.1	1.6e-17	34.83	myb domain protein 116	[more]
AT1G25340.2	1.6e-17	34.83	myb domain protein 116	[more]
AT1G48000.1	5.2e-16	51.61	myb domain protein 112	[more]
AT2G47190.1	5.2e-16	61.29	myb domain protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 1..62 e-value: 1.7E-9 score: 39.6
None	No IPR available	PANTHER	PTHR45675:SF63	MYB DOMAIN PROTEIN 116	coord: 2..170
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant	PANTHER	PTHR45675	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	coord: 2..170
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..27 score: 12.600566
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 3..21 e-value: 3.73961E-4 score: 34.8586
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 2..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g04850.1	Cp4.1LG13g04850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding