Cp4.1LG13g04630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g04630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	two-component response regulator ORR9-like
Location	Cp4.1LG13: 6004192 .. 6006005 (+)
RNA-Seq Expression	Cp4.1LG13g04630
Synteny	Cp4.1LG13g04630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTGAGGTACAATACAAATAAAAAAAATACAAGTTTTTCAACAGCGTTCTATCTGCCGGGAATTGATGGAGATTAAGCCTTGATTTTTATTATTATTATTTTATGAATTATTTAAATTTTGAATATCCATGAAACACAGGAAGTCAAAGTCAACCTAATCATGACAGATTACTGCATGCCTGGAATGAGTGGCTATGATCTACTCAAACGACTCAAGGTCAATTCCACTACTACCCTTTCATACATACAACAAATTAATGCTTATTTTTTTTCCACCTCTAAATTTTAGATTATTGTACCTGTCCAATTTCATCACTGTCAAATATTATATTATTTAAATTTTATTTTGTACTTCCTTTATATTATTACGATTTACCGTTAGCGGATATTATCCTTTTGTATTTTCTTTTAAAATTTTAATATTATTTAAATTTTACTTTGGACTTCCTTTATATTATTACTATCCATTGCTGGCCGATATTATCCTTTTGTATTTCCTTTCAATCTTCCACTCAAGGTTTTAAAATACAATTTTCACACCATTATAAGGAAGGTGTTTCCTTCTCTAACAGATGCGAGATCTCATAATCCACCCACTTAGGGGCCTAGTTGTTGGCACACGACATGATATCTATACCATTTATAACTGTTCAAGCCTACCGCCAATGAATGTTTATTTCCCCTTAACAGGAATGTTTCGTTACCCTCTCCGACCCATGTGGATCTCAGAGTTACATTATAATTTAATTCTTTATTTTTTTCCCCTCTAAAATCCATTAGATTTTTAAAATTAAGATTTTTTTATTATAAAAAACTTATTTTATTTTAAAATTTGGCTATGAACTCAAAATTATTGAAAAAATCACACACAATTTGAATATCAAACTTAGAGCTAAAATATCAATATTAGAAGATGATTGCTTACCTGATACGTGAATTGGCAGGGATCTTACTGGAAAGATATTCCTGTTGTTGTCATGTCATCAGAGAACGAGCCTTCAAGAATCAACATGTAAAAAGATTGATGCTCTCTCACTCGATTTCTTCTCTAAAATTCAAATTTTAGTTTAATTCACAAAGTGATCGTAAAATGAATCGATGAACTTACCAAACAAATGCAATTTAACTTACAGGTGTTTGGAAGAAGGGGCAGAGGAATTCCTTTTGAAGCCTCTTCAACTTTCCGACGTGAAGAAGCTCGAGCCTCACCTTCAAAAGTCCCTCACTCGCTGTTCTGCAGAAATAAAGGAAGAACAAACCGTTGGATTTGGAATTGAAATCGGAATCGGAATCGGAATCGGAATCACTGATTCCGATGTCGTCGACGGCGGAAACAACTCAGATAGTAACAAGAACGACAATAGCGATCTGAAAGGCGACCGAAGCTGAAAGAATTGCAAGGTGGAGCATAAGAAATGGTGCAATATTGGCAGGTAGCATTTCGTCGAACACCTTTCCTGCAATATAAAATGGCTTGTATACCGATCGTGTTTGATGATCAGTGCCTCCCAAAATGGGATGTGTTGGAGCGTAAATCAATCTAGGGTTTACAACTCGGATTAAAATTATCAAATGAAATTTCCATTTTGTCTCTAGGGTTCAGTAATCAAGCGCTGAAAATGGCGGAAAACCAAGAGTTTCCAGTTTTTGGAACTAAGAGCGCCAGAGGATTAAAAAGAATCCATAAAATCAAATTCCTAACACAAAAATTTGAAAACAATTATTGGAATGAAAACTCGAGTTTGATTTTTATGTTTTTATGTGTTATTTGGTATAATTTATAATATATTATATACTTATTTTATTAATTTA

mRNA sequence

AATTTGAGGTACAATACAAATAAAAAAAATACAAGTTTTTCAACAGCGTTCTATCTGCCGGGAATTGATGGAGATTAAGCCTTGATTTTTATTATTATTATTTTATGAATTATTTAAATTTTGAATATCCATGAAACACAGGAAGTCAAAGTCAACCTAATCATGACAGATTACTGCATGCCTGGAATGAGTGGCTATGATCTACTCAAACGACTCAAGGGATCTTACTGGAAAGATATTCCTGTTGTTGTCATGTCATCAGAGAACGAGCCTTCAAGAATCAACATGTGTTTGGAAGAAGGGGCAGAGGAATTCCTTTTGAAGCCTCTTCAACTTTCCGACGTGAAGAAGCTCGAGCCTCACCTTCAAAAGTCCCTCACTCGCTGTTCTGCAGAAATAAAGGAAGAACAAACCGTTGGATTTGGAATTGAAATCGGAATCGGAATCGGAATCGGAATCACTGATTCCGATGTCGTCGACGGCGGAAACAACTCAGATAGTAACAAGAACGACAATAGCGATCTGAAAGGCGACCGAAGCTGAAAGAATTGCAAGGTGGAGCATAAGAAATGGTGCAATATTGGCAGGTAGCATTTCGTCGAACACCTTTCCTGCAATATAAAATGGCTTGTATACCGATCGTGTTTGATGATCAGTGCCTCCCAAAATGGGATGTGTTGGAGCGTAAATCAATCTAGGGTTTACAACTCGGATTAAAATTATCAAATGAAATTTCCATTTTGTCTCTAGGGTTCAGTAATCAAGCGCTGAAAATGGCGGAAAACCAAGAGTTTCCAGTTTTTGGAACTAAGAGCGCCAGAGGATTAAAAAGAATCCATAAAATCAAATTCCTAACACAAAAATTTGAAAACAATTATTGGAATGAAAACTCGAGTTTGATTTTTATGTTTTTATGTGTTATTTGGTATAATTTATAATATATTATATACTTATTTTATTAATTTA

Coding sequence (CDS)

ATGACAGATTACTGCATGCCTGGAATGAGTGGCTATGATCTACTCAAACGACTCAAGGGATCTTACTGGAAAGATATTCCTGTTGTTGTCATGTCATCAGAGAACGAGCCTTCAAGAATCAACATGTGTTTGGAAGAAGGGGCAGAGGAATTCCTTTTGAAGCCTCTTCAACTTTCCGACGTGAAGAAGCTCGAGCCTCACCTTCAAAAGTCCCTCACTCGCTGTTCTGCAGAAATAAAGGAAGAACAAACCGTTGGATTTGGAATTGAAATCGGAATCGGAATCGGAATCGGAATCACTGATTCCGATGTCGTCGACGGCGGAAACAACTCAGATAGTAACAAGAACGACAATAGCGATCTGAAAGGCGACCGAAGCTGA

Protein sequence

MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSDLKGDRS

Homology

[Close]

BLAST of Cp4.1LG13g04630 vs. ExPASy Swiss-Prot
Match: Q4GZK2 (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=RR9 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.5e-26
Identity = 55/86 (63.95%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLK++K  SY +DIPVV+MSS+N PSRIN CLEEGA+EF LKP++LS
Sbjct: 73  ITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLS 132

Query: 61  DVKKLEPHLQKSLTRCSAEIKEEQTV 86
           D+ KL+PH+ KS  RC    ++EQ +
Sbjct: 133 DMSKLKPHILKS--RCKEHYQQEQNL 156

[Close]

BLAST of Cp4.1LG13g04630 vs. ExPASy Swiss-Prot
Match: Q2RAP3 (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 GN=RR9 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 8.5e-26
Identity = 55/86 (63.95%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLK++K  SY +DIPVV+MSS+N PSRIN CLEEGA+EF LKP++LS
Sbjct: 73  ITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLS 132

Query: 61  DVKKLEPHLQKSLTRCSAEIKEEQTV 86
           D+ KL+PH+ KS  RC    ++EQ +
Sbjct: 133 DMSKLKPHILKS--RCKEHYQQEQNL 156

[Close]

BLAST of Cp4.1LG13g04630 vs. ExPASy Swiss-Prot
Match: B8BLZ4 (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN=RR10 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 55/84 (65.48%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLK++K  SY +DIPVV+MSS+N PSRIN CLEEGA+EF LKP++LS
Sbjct: 73  ITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLS 132

Query: 61  DVKKLEPHLQKSLTRCSAEIKEEQ 84
           D+ KL+PH+ KS  RC    ++EQ
Sbjct: 133 DMSKLKPHILKS--RCKEHYQQEQ 154

[Close]

BLAST of Cp4.1LG13g04630 vs. ExPASy Swiss-Prot
Match: Q2QXY3 (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 GN=RR10 PE=2 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 55/84 (65.48%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLK++K  SY +DIPVV+MSS+N PSRIN CLEEGA+EF LKP++LS
Sbjct: 73  ITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLS 132

Query: 61  DVKKLEPHLQKSLTRCSAEIKEEQ 84
           D+ KL+PH+ KS  RC    ++EQ
Sbjct: 133 DMSKLKPHILKS--RCKEHYQQEQ 154

[Close]

BLAST of Cp4.1LG13g04630 vs. ExPASy Swiss-Prot
Match: Q4GZK7 (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=RR4 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-23
Identity = 52/71 (73.24%), Postives = 63/71 (88.73%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKG-SYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLKR+KG S  KDIPVV+MSSEN P+RIN CLE+GAEEF LKP++L+
Sbjct: 78  ITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEEFFLKPVKLA 137

Query: 61  DVKKLEPHLQK 71
           D+KKL+ HL K
Sbjct: 138 DMKKLKSHLLK 148

[Close]

BLAST of Cp4.1LG13g04630 vs. NCBI nr
Match: XP_023550085.1 (two-component response regulator ORR9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248 bits (634), Expect = 5.87e-83
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60

Query: 61  VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSD 120
           VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSD
Sbjct: 61  VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSD 120

Query: 121 LKGDRS 126
           LKGDRS
Sbjct: 121 LKGDRS 126

[Close]

BLAST of Cp4.1LG13g04630 vs. NCBI nr
Match: XP_022938354.1 (two-component response regulator ORR9-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 233 bits (595), Expect = 1.18e-75
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 97  MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 156

Query: 61  VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSD 120
           VKKLEPHLQKSLTRCSAEIKE++TVGFGIEIGIGIGI  TDSDVVD GNNSDSNKNDN D
Sbjct: 157 VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGI--TDSDVVDDGNNSDSNKNDNGD 216

Query: 121 LKGDRS 126
           LKGDRS
Sbjct: 217 LKGDRS 220

[Close]

BLAST of Cp4.1LG13g04630 vs. NCBI nr
Match: XP_022938353.1 (two-component response regulator ORR9-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 233 bits (595), Expect = 1.30e-75
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 100 MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 159

Query: 61  VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSD 120
           VKKLEPHLQKSLTRCSAEIKE++TVGFGIEIGIGIGI  TDSDVVD GNNSDSNKNDN D
Sbjct: 160 VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGI--TDSDVVDDGNNSDSNKNDNGD 219

Query: 121 LKGDRS 126
           LKGDRS
Sbjct: 220 LKGDRS 223

[Close]

BLAST of Cp4.1LG13g04630 vs. NCBI nr
Match: XP_022938352.1 (two-component response regulator ORR9-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 233 bits (595), Expect = 1.44e-75
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 103 MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 162

Query: 61  VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSD 120
           VKKLEPHLQKSLTRCSAEIKE++TVGFGIEIGIGIGI  TDSDVVD GNNSDSNKNDN D
Sbjct: 163 VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGI--TDSDVVDDGNNSDSNKNDNGD 222

Query: 121 LKGDRS 126
           LKGDRS
Sbjct: 223 LKGDRS 226

[Close]

BLAST of Cp4.1LG13g04630 vs. NCBI nr
Match: KAG6578959.1 (Two-component response regulator ARR9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 232 bits (592), Expect = 3.06e-75
Identity = 119/126 (94.44%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKRL+GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 94  MTDYCMPGMSGYDLLKRLEGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 153

Query: 61  VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSD 120
           VKKLEPHLQKSLTRCSAEIKE++TVGFGIEIGIGIGI  TDSDVVD GNNSD+NKNDNSD
Sbjct: 154 VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGI--TDSDVVDDGNNSDTNKNDNSD 213

Query: 121 LKGDRS 126
           LKGDRS
Sbjct: 214 LKGDRS 217

[Close]

BLAST of Cp4.1LG13g04630 vs. ExPASy TrEMBL
Match: A0A6J1FDU5 (two-component response regulator ORR9-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111444632 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 5.72e-76
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 97  MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 156

Query: 61  VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSD 120
           VKKLEPHLQKSLTRCSAEIKE++TVGFGIEIGIGIGI  TDSDVVD GNNSDSNKNDN D
Sbjct: 157 VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGI--TDSDVVDDGNNSDSNKNDNGD 216

Query: 121 LKGDRS 126
           LKGDRS
Sbjct: 217 LKGDRS 220

[Close]

BLAST of Cp4.1LG13g04630 vs. ExPASy TrEMBL
Match: A0A6J1FIN1 (two-component response regulator ORR9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444632 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 6.31e-76
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 100 MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 159

Query: 61  VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSD 120
           VKKLEPHLQKSLTRCSAEIKE++TVGFGIEIGIGIGI  TDSDVVD GNNSDSNKNDN D
Sbjct: 160 VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGI--TDSDVVDDGNNSDSNKNDNGD 219

Query: 121 LKGDRS 126
           LKGDRS
Sbjct: 220 LKGDRS 223

[Close]

BLAST of Cp4.1LG13g04630 vs. ExPASy TrEMBL
Match: A0A6J1FDT6 (two-component response regulator ORR9-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444632 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 6.96e-76
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 103 MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 162

Query: 61  VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSD 120
           VKKLEPHLQKSLTRCSAEIKE++TVGFGIEIGIGIGI  TDSDVVD GNNSDSNKNDN D
Sbjct: 163 VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGI--TDSDVVDDGNNSDSNKNDNGD 222

Query: 121 LKGDRS 126
           LKGDRS
Sbjct: 223 LKGDRS 226

[Close]

BLAST of Cp4.1LG13g04630 vs. ExPASy TrEMBL
Match: A0A6J1JYN5 (two-component response regulator ORR9-like OS=Cucurbita maxima OX=3661 GN=LOC111489481 PE=4 SV=1)

HSP 1 Score: 218 bits (556), Expect = 4.89e-70
Identity = 113/125 (90.40%), Postives = 117/125 (93.60%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 99  MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 158

Query: 61  VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNSDSNKNDNSD 120
           VKKLEPHLQKSLTRCSAEIKEE+TVG GI I IGIGIG    +V+D GNNSDSNKND+SD
Sbjct: 159 VKKLEPHLQKSLTRCSAEIKEEETVGIGIGIEIGIGIG----NVIDDGNNSDSNKNDSSD 218

Query: 121 LKGDR 125
           LKGDR
Sbjct: 219 LKGDR 219

[Close]

BLAST of Cp4.1LG13g04630 vs. ExPASy TrEMBL
Match: A0A6J1JJQ0 (two-component response regulator ARR17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487540 PE=4 SV=1)

HSP 1 Score: 172 bits (436), Expect = 1.13e-51
Identity = 91/120 (75.83%), Postives = 103/120 (85.83%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGM+GYDLLKRLKGS WKDIPVVVMSSENEPSRI+MCLEEGAEEFLLKPLQLSD
Sbjct: 90  MTDYCMPGMTGYDLLKRLKGSSWKDIPVVVMSSENEPSRIHMCLEEGAEEFLLKPLQLSD 149

Query: 61  VKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGNNS--DSNKNDN 118
           VKKLEPHLQ+SL+R SAE+KEE+TV    EIGI      T+SD +D  N++  ++NKNDN
Sbjct: 150 VKKLEPHLQRSLSRSSAEVKEEETVEIRNEIGI------TNSDAIDNENSTKEENNKNDN 203

[Close]

BLAST of Cp4.1LG13g04630 vs. TAIR 10
Match: AT3G57040.1 (response regulator 9 )

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-24
Identity = 54/110 (49.09%), Postives = 82/110 (74.55%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLK++K  S ++DIPVV+MSSEN P+RI+ CLEEGAEEF LKP++L+
Sbjct: 78  ITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLKPVRLA 137

Query: 61  DVKKLEPHLQKSLTRCSAEIKEEQTVGFGIEIGIGIGIGITDSDVVDGGN 110
           D+ KL+PH+ K+  + + +++E +T     ++  G+   + D ++ D  N
Sbjct: 138 DLNKLKPHMMKTKLK-NQKLEEIETTS---KVENGVPTAVADPEIKDSTN 183

[Close]

BLAST of Cp4.1LG13g04630 vs. TAIR 10
Match: AT2G41310.1 (response regulator 3 )

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-23
Identity = 48/79 (60.76%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGS-YWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLK++K S  ++ IPVV+MSSEN P+RI+ CLEEGAEEF LKP++L+
Sbjct: 76  ITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLKPVKLA 135

Query: 61  DVKKLEPHLQKSLTRCSAE 79
           D+ KL+PH+ K+  +  +E
Sbjct: 136 DLTKLKPHMMKTKLKKESE 154

[Close]

BLAST of Cp4.1LG13g04630 vs. TAIR 10
Match: AT1G10470.1 (response regulator 4 )

HSP 1 Score: 98.6 bits (244), Expect = 3.8e-21
Identity = 44/73 (60.27%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GY+LLK++K  S ++++PVV+MSSEN  +RI+ CLEEGA++FLLKP++L+
Sbjct: 93  ITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLA 152

Query: 61  DVKKLEPHLQKSL 73
           DVK+L  HL K +
Sbjct: 153 DVKRLRSHLTKDV 165

[Close]

BLAST of Cp4.1LG13g04630 vs. TAIR 10
Match: AT1G59940.1 (response regulator 3 )

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20
Identity = 44/73 (60.27%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLKGS-YWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GY+LLK++K S  +K++PVV+MSSEN  +RI+ CLEEGAE+FLLKP++L+
Sbjct: 92  ITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLA 151

Query: 61  DVKKLEPHLQKSL 73
           DVK+L  +L + +
Sbjct: 152 DVKRLRSYLTRDV 164

[Close]

BLAST of Cp4.1LG13g04630 vs. TAIR 10
Match: AT3G48100.1 (response regulator 5 )

HSP 1 Score: 95.5 bits (236), Expect = 3.2e-20
Identity = 47/84 (55.95%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           MTDY MPGM+GY+LLK++K  S +++IPVV+MSSEN   RI+ CLEEGAE+FLLKP++L+
Sbjct: 85  MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLA 144

Query: 61  DVKKLEPHLQKSLTRCSAEIKEEQ 84
           DVK+L   L K+  R    I  ++
Sbjct: 145 DVKRLRDSLMKAEERAFKNIMHKR 168

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g04630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4GZK2	8.5e-26	63.95	Two-component response regulator ORR9 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q2RAP3	8.5e-26	63.95	Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
B8BLZ4	1.1e-25	65.48	Two-component response regulator ORR10 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q2QXY3	1.1e-25	65.48	Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q4GZK7	1.8e-23	73.24	Two-component response regulator ORR4 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of Cp4.1LG13g04630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550085.1	5.87e-83	100.00	two-component response regulator ORR9-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938354.1	1.18e-75	95.24	two-component response regulator ORR9-like isoform X3 [Cucurbita moschata]	[more]
XP_022938353.1	1.30e-75	95.24	two-component response regulator ORR9-like isoform X2 [Cucurbita moschata]	[more]
XP_022938352.1	1.44e-75	95.24	two-component response regulator ORR9-like isoform X1 [Cucurbita moschata]	[more]
KAG6578959.1	3.06e-75	94.44	Two-component response regulator ARR9, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of Cp4.1LG13g04630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDU5	5.72e-76	95.24	two-component response regulator ORR9-like isoform X3 OS=Cucurbita moschata OX=3...	[more]
A0A6J1FIN1	6.31e-76	95.24	two-component response regulator ORR9-like isoform X2 OS=Cucurbita moschata OX=3...	[more]
A0A6J1FDT6	6.96e-76	95.24	two-component response regulator ORR9-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1JYN5	4.89e-70	90.40	two-component response regulator ORR9-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1JJQ0	1.13e-51	75.83	two-component response regulator ARR17-like isoform X2 OS=Cucurbita maxima OX=36...	[more]

BLAST of Cp4.1LG13g04630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57040.1	1.7e-24	49.09	response regulator 9	[more]
AT2G41310.1	3.1e-23	60.76	response regulator 3	[more]
AT1G10470.1	3.8e-21	60.27	response regulator 4	[more]
AT1G59940.1	1.1e-20	60.27	response regulator 3	[more]
AT3G48100.1	3.2e-20	55.95	response regulator 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 2..62 e-value: 1.7E-12 score: 47.5
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 1..69 score: 21.640614
None	No IPR available	GENE3D	3.40.50.2300		coord: 1..86 e-value: 2.4E-17 score: 65.6
None	No IPR available	PIRSR	PIRSR026389-3	PIRSR026389-3	coord: 2..63 e-value: 8.2E-4 score: 15.5
None	No IPR available	PIRSR	PIRSR002937-1	PIRSR002937-1	coord: 3..63 e-value: 0.0035 score: 14.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..126
None	No IPR available	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 1..112
None	No IPR available	PANTHER	PTHR43874:SF96	TWO-COMPONENT RESPONSE REGULATOR ORR4	coord: 1..112
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 2..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g04630.1	Cp4.1LG13g04630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016301	kinase activity