Cp4.1LG13g04320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g04320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein STAY-GREEN LIKE, chloroplastic-like
Location	Cp4.1LG13: 6179343 .. 6184231 (+)
RNA-Seq Expression	Cp4.1LG13g04320
Synteny	Cp4.1LG13g04320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTGTGTGGAGGGAGATGGGCGGACTTGGATTTTGGGCCAACGCGAAGGTCTTTGAATCATTGTCCACATGAGCGACTGCAAACCAGACGACAATGGCTGCCTCTGGTTCTGATTCTGAATCTGATTTTGAAAGATGAAGGTGAAGAAGAAGAGCCGTAAGTTGTTATGCGTCGTCTTCCATGGCTTTTCAGTGTGCTTCTTACTCTGTTCTTCGATTGCCAGCCAAGCCTAAGTTCGAATTTGTTGTGAGGAAGAAGCCTGTTGTTCTGTGTTCTTCTTTTCGTAGGACTCAGGCTTCTTACAATACTCTCGTCTCTGAGGTACCATTCTCTTTCCCTCTCTGTTCTTTTCATTTGTTTCTAGGTCGCCTGGGTTTGATTCAATCTCCGTTGATTTGAAGGGTTTTTTTGTGGGTGAATGAATCTATTTGGTTCTGTTTGATCTCGTGCTTAGAGATTTTCCTTGTCTGATTTTGATCTGCATTTTGTTCTTCAATGTTTGTGGTTTCCTTCTCAATCGACTTGAATCCTGAGAGTTAAAAGGATTCTGTTGTCGAGTTTTGGGTTTCGTCGAGAATGTATCGTAAGAAATCACGACCCTCCATCCTCTACAATGGTTTGATATTGTTCACTTTGAGCATAAGCTGATAGTATTCCTTCCTAGTAAACTTATCATCGACCCTTTAATTAGCCAATGTTAAGACTCCTTTCCCAACAATCCTCAACCATCCTCCCCTTGAACAAAGTCATAGAGCCTCCCTTGAGGCCTATGAAACCCTCGAATAGCCTCCTCTTAATAGAGGCTTGACTCCTTCTCTAGAATCCTCGAACAAAGTACACCATAGAGCCTCCCTTGAGGTCTATGGAGCCTTTGGACAACCTCCCCTTAATCGAGGCTCGACTCCTTCTCTGGATCCCTCGAACTAAGTACATCTTTTGTTTGACACTTGAGTCACTTTTGACTACATTTTCAAGACTCACAACTTCTTTGTTCGACGTTTGAGGATTCTATTGACATGGTTAAGTTAAAGGCAGGAATCACGACCCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAACTCTCATGGTTTTGCTTTTGGTCTTTGTAAAAGGCCTCATGCCAATAGAGATGTATTCCATACTTATAAACCCTTGATCACCCCTTAATCCTCAACACCACGAAGGCTAAAATTCACGATGATGCACATGAAATCGGTTGCTGGATTTTCATTGTGCAATGTCCGGTAGATATTGCTAAGAAGTTCAGCAGTTGAGTTACTAGTAGTTGGTTCTTTCAAATGAAATTTCTTGAACAGTCTGAACAATTATTGAATCAAAGCAGCCAAAATTCAAATGGGTTCTTGCTGGTTCTTATGATGCATTGATCATTGGTAGGCTGTTAGGATATTGGTTCCTCCAGCAAGATTTGAAGCTTCAAAGCTAAAAGTTGAATTCAGTAGAGAGGTGAAGAAGTGTGCAGGGATCATCCCAAGAACATACATACTATCACACTGTGACTTCACTGCTAATCTCACCTTAACCATCTCTGATGTTATCAACCTTGATCAGGTACAAATCTATGGCTACTTCACTATCTGAATGGAACAATACATTGTTCTTTTCTTCTCATTTTTGGGTCTGTGAATGTTAATAGTTGAGAGGGTGGTACAACAAGGATGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTGTCTTCATGTTCATTGCTATGTCAGCGGTCCTAATTCTTTGCTCGACCTTGCTGCAGAGTTTAGATACCACATTTTCTCCAAAGAATTGCCTCTTGTAAGTTTATTTTCTATTACTATATCTCAAAGTTTGACATGGGGAACTGTAACAGCCCTGGCTCGATTCCCTGTCATGGTAGTTTAGTGGTAGAATAGTACCCTGCCACGGTATAGACTCGGGTACAATTCCCGGCCGGTGCATATTTTTCTTGTGAGATCCTACATTGGTTGGAGAGGAGAACGAAGCATCCCTTATAAGGGTGTGGAAACCTCTCTTTATTATACACGTTTTAAAACTGTGTCACCGGGAAAAAGCGGACAATATCTGTTAGCAGTGAGCTTGAGCTTGGACTGTTACAGGAACTCTCATATTCAACCTACAACGATCGAAATGCTATAATAAGACTAAATGCCTCTCTTTTTGTTAAACCAGGTGCTTGAATCTGTCCTGTATGGAGATTCAATATTGTTTGGGGAGAATCCTGAGCTGCTAGATGCCTTGGTCAGGGTATATTTTCATTCTAGCTCGCCGAAGTACAATAGACTCGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGTAAACTTGATAACATGTTATGAAAATTTCATTGACTTGACGTCTTGTTTCTCAAACTTTGCTTTGCCTACACTTTCCAGGGGAGGCATCATCATATGCAAGGGCTTCTAAGGGGTAGCAAGGACGTGCCCTCTCCTAAAAAGTTGAGTAGCCCAAAATCAATCTTTCAAGCTCTCTTTGCCTTCATTATCTGTACTGCATTGCATAAACTGGTGAACTGATAAACTGCTTATCTCTAAGAAACTGCTGTCTTAATAAGTTTTATTCTCCATTTAATGCAATTTCTTTGTGGAAGGAGCAAAAGAGTACTCTTGTTCTGTTGAATGTATGAATCACTTTATTCTTTGACCAATAAAGGCATATTTGTTCCTGCATTGTGTTTTCAGAATCTAAGACCCATTGGCATGTTGACAAAGTGTTGTATGTTACGGAACAAAAGAGATGCCAAATGAACATAATATATAATATATGCAGATCAGTGGCTCAATCTAAGACCCATCCAAAGCAACATGAACAAATTCTAACACCTACTTCCTTACAAAATGGATGGCTTTGTTCATGAATATGCAACAACCTCGTTAAGGAACCTCACAATCGCCTGCCTATACTAGAACGACGACGACGACAAAGAAAAAATAAGGTCAGTCTTTACTATTCGAGTCTCAGAATGGTCGGTTGGATTTGGAGGATGAAGATGTGTTGGCCTTGGAAAAATCCACCAGATCTTTGAAAAGGGCCTCCTCATGCTCTGCAGCTCTGGTCGGGGTGGAAGGACCAAGCGACAGATTCTTGGTATTCCCGACTATCTTGTCGTAAGAAGTATAGCCGTTGCTCAAATGGGGCGAAGTGCCTCCTGTAACAGCTTTTTGTTGCTCAAAATATTGTTGTCTTTGATTATATCTTGAGGGTGGGGGAGGGAGGGAGCTTGGTGTTGCGGAGGGCGGGTTTGTGGACATGCTTCTTGGGGGTGGCTCGACGAATAAAGGCTGTCTGGTGTAGAAAGGTGAGGAAGATGAAGTTGTTGGTGAAGGTGGGGAAGTTGAAGGTGTATAAGATGGTGGCTCTACTGTCCTTGGAGACCCTTCACGCTTGTACACATCGCCGCTAAGATGATCGATCATTTCTGCACCAGTTGTCTTCTTTAATGAGGGTGAAGGAAGCGGACTTACTCGAGATGATTGACCGTTTGCCAGTTTCCTGTCCCTTGCATAAATGTGATCTCTTGTTGACCTGCAAGTCATGTCTAACAGTTACAATGACATTCTACTTTTTATAGAATGGAACAAGGTAAGGGGACTCAATTATAGGCACCTGCGAGCTAATGGTGTAAAATCATCTTCCGACTCATCCTCCTCGGGGTCCATATATGGAACCGATGGAACGGGAGGAGGTTCTGTTCTTCTAGCTTCCGTTGTAAACGTTCCTTTTGCAATGTCATCATGGTAGCTGAGTACACGCTGCAGACTGTCATTCAACACCAATCCTTGACATAACCGTTCCTCATCTCTGAAATGGGAGCAAACAGCACAAGTCAGAGGTTAAGTCTACGGTAATAAATAAAGCTGGCACGATATCTTACGTTGACTCATTCACAAGTATCACGACACGGCTCTGGTAGGAACGGCATTGATCAACAAGATCGACAATAACTTCTTGCTTCAAAGCCTGACAACATGAAAAAGTCAAAATGTCGAACGAAAAAGGACAAATTGTGCATTATGCCTCATATGAGTTTCCTCAAACTCTTTCTTTTACAACATGAAGACACTTTTAGAGGAATACCTCTGGAGTCTTCGGATCTAACGCATCGAGCATTTCCAACAAAACATCTGCTAGCCCCTGTCCATTTTGAATTTCTGGCAAGCTGTTTAAGTTCAGATTATAATCAGAGTTGAATCCAGAGAGGCAATGACAAATCGAAAAGAAACAACTAGACTCGAGCTAGAAGAATGAAGTGGACCGACGCATTGGATCGCTTCATAGCCCGTTGCTTTTTCAAAACGACGAGTCCAAAGGGAATTAAAACGTTACCTTAAACCAGAAGCATCAGACTGAAGAGAAACCTGAGCAGCAAGATCATCATAGGGTGAAGCATGTTGCTCAATAACAGGGTGTATCTGAGGTGGACTTAAGAACTGCCCAACGTTCTCTCGTCTTGGTGGAAATCGAAATCCAGCATTCTGTATTACGAAACGAAAACAAATGAGTACTGCAAAAAGATTTCCCAACACACTGTCAAAGGTTTAAAAGGTTACATATCAGAGTAAAAGATAACTCACCTTCAATTCATTGTAGGCTGCATAGTACTGTGGACACTTTCCCTTGGAGCCACCCCCAAATGTTGCTTGCCATGCATCTACCAAAGTTAATATCTTGTCCCGAACAGTCGAATCAGGCTGCTAGGATTTAAAAAAACACATTAAACTGTTTGTCCGGGTTTGCGATGTATACTTAACCAAGTAACACAGGATAGATTCATGTCGAAGTTCACAGATACCTTCTTTTTTACAATTTTAACCATTTCGTGCAGGATATTACGATCTA

mRNA sequence

ATGAATGTGTGTGGAGGGAGATGGGCGGACTTGGATTTTGGGCCAACGCGAAGGTCTTTGAATCATTGTCCACATGAGCGACTGCAAACCAGACGACAATGGCTGCCTCTGGTTCTGATTCTGAATCTGATTTTGAAAGATGAAGGTGAAGAAGAAGAGCCGTAAGTTGTTATGCGTCGTCTTCCATGGCTTTTCAGTGTGCTTCTTACTCTGTTCTTCGATTGCCAGCCAAGCCTAAGTTCGAATTTGTTGTGAGGAAGAAGCCTGTTGTTCTGTGTTCTTCTTTTCGTAGGACTCAGGCTTCTTACAATACTCTCGTCTCTGAGGCTGTTAGGATATTGGTTCCTCCAGCAAGATTTGAAGCTTCAAAGCTAAAAGTTGAATTCAGTAGAGAGGTGAAGAAGTGTGCAGGGATCATCCCAAGAACATACATACTATCACACTGTGACTTCACTGCTAATCTCACCTTAACCATCTCTGATGTTATCAACCTTGATCAGTTGAGAGGGTGGTACAACAAGGATGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTGTCTTCATGTTCATTGCTATGTCAGCGGTCCTAATTCTTTGCTCGACCTTGCTGCAGAGTTTAGATACCACATTTTCTCCAAAGAATTGCCTCTTGTGCTTGAATCTGTCCTGTATGGAGATTCAATATTGTTTGGGGAGAATCCTGAGCTGCTAGATGCCTTGGTCAGGGTATATTTTCATTCTAGCTCGCCGAAGTACAATAGACTCGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGGGAGGCATCATCATATGCAAGGGCTTCTAAGGGGTAGCAAGGACGTGCCCTCTCCTAAAAAGTTGAGTAGCCCAAAATCAATCTTTCAAGCTCTCTTTGCCTTCATTATCTGTACTGCATTGCATAAACTGGTGAACTGATAAACTGCTTATCTCTAAGAAACTGCTGTCTTAATAAGTTTTATTCTCCATTTAATGCAATTTCTTTGTGGAAGGAGCAAAAGAGTACTCTTGTTCTGTTGAATGTATGAATCACTTTATTCTTTGACCAATAAAGGCATATTTGTTCCTGCATTGTGTTTTCAGAATCTAAGACCCATTGGCATGTTGACAAAGTGTTGTATGTTACGGAACAAAAGAGATGCCAAATGAACATAATATATAATATATGCAGATCAGTGGCTCAATCTAAGACCCATCCAAAGCAACATGAACAAATTCTAACACCTACTTCCTTACAAAATGGATGGCTTTGTTCATGAATATGCAACAACCTCGTTAAGGAACCTCACAATCGCCTGCCTATACTAGAACGACGACGACGACAAAGAAAAAATAAGGTCAGTCTTTACTATTCGAGTCTCAGAATGGTCGGTTGGATTTGGAGGATGAAGATGTGTTGGCCTTGGAAAAATCCACCAGATCTTTGAAAAGGGCCTCCTCATGCTCTGCAGCTCTGGTCGGGGTGGAAGGACCAAGCGACAGATTCTTGGTATTCCCGACTATCTTGTCGTAAGAAGTATAGCCGTTGCTCAAATGGGGCGAAGTGCCTCCTGTAACAGCTTTTTGTTGCTCAAAATATTGTTGTCTTTGATTATATCTTGAGGGTGGGGGAGGGAGGGAGCTTGGTGTTGCGGAGGGCGGGTTTGTGGACATGCTTCTTGGGGGTGGCTCGACGAATAAAGGCTGTCTGGTGTAGAAAGGTGAGGAAGATGAAGTTGTTGGTGAAGGTGGGGAAGTTGAAGGTGTATAAGATGGTGGCTCTACTGTCCTTGGAGACCCTTCACGCTTGTACACATCGCCGCTAAGATGATCGATCATTTCTGCACCAGTTGTCTTCTTTAATGAGGGTGAAGGAAGCGGACTTACTCGAGATGATTGACCGTTTGCCAGTTTCCTGTCCCTTGCATAAATGTGATCTCTTGTTGACCTGCAAGTCATGTCTAACAGTTACAATGACATTCTACTTTTTATAGAATGGAACAAGGTAAGGGGACTCAATTATAGGCACCTGCGAGCTAATGGTGTAAAATCATCTTCCGACTCATCCTCCTCGGGGTCCATATATGGAACCGATGGAACGGGAGGAGGTTCTGTTCTTCTAGCTTCCGTTGTAAACGTTCCTTTTGCAATGTCATCATGGTAGCTGAGTACACGCTGCAGACTGTCATTCAACACCAATCCTTGACATAACCGTTCCTCATCTCTGAAATGGGAGCAAACAGCACAAGTCAGAGGTTAAGTCTACGGTAATAAATAAAGCTGGCACGATATCTTACGTTGACTCATTCACAAGTATCACGACACGGCTCTGGTAGGAACGGCATTGATCAACAAGATCGACAATAACTTCTTGCTTCAAAGCCTGACAACATGAAAAAGTCAAAATGTCGAACGAAAAAGGACAAATTGTGCATTATGCCTCATATGAGTTTCCTCAAACTCTTTCTTTTACAACATGAAGACACTTTTAGAGGAATACCTCTGGAGTCTTCGGATCTAACGCATCGAGCATTTCCAACAAAACATCTGCTAGCCCCTGTCCATTTTGAATTTCTGGCAAGCTGTTTAAGTTCAGATTATAATCAGAGTTGAATCCAGAGAGGCAATGACAAATCGAAAAGAAACAACTAGACTCGAGCTAGAAGAATGAAGTGGACCGACGCATTGGATCGCTTCATAGCCCGTTGCTTTTTCAAAACGACGAGTCCAAAGGGAATTAAAACGTTACCTTAAACCAGAAGCATCAGACTGAAGAGAAACCTGAGCAGCAAGATCATCATAGGGTGAAGCATGTTGCTCAATAACAGGGTGTATCTGAGGTGGACTTAAGAACTGCCCAACGTTCTCTCGTCTTGGTGGAAATCGAAATCCAGCATTCTGTATTACGAAACGAAAACAAATGAGTACTGCAAAAAGATTTCCCAACACACTGTCAAAGGTTTAAAAGGTTACATATCAGAGTAAAAGATAACTCACCTTCAATTCATTGTAGGCTGCATAGTACTGTGGACACTTTCCCTTGGAGCCACCCCCAAATGTTGCTTGCCATGCATCTACCAAAGTTAATATCTTGTCCCGAACAGTCGAATCAGGCTGCTAGGATTTAAAAAAACACATTAAACTGTTTGTCCGGGTTTGCGATGTATACTTAACCAAGTAACACAGGATAGATTCATGTCGAAGTTCACAGATACCTTCTTTTTTACAATTTTAACCATTTCGTGCAGGATATTACGATCTA

Coding sequence (CDS)

ATGGCTTTTCAGTGTGCTTCTTACTCTGTTCTTCGATTGCCAGCCAAGCCTAAGTTCGAATTTGTTGTGAGGAAGAAGCCTGTTGTTCTGTGTTCTTCTTTTCGTAGGACTCAGGCTTCTTACAATACTCTCGTCTCTGAGGCTGTTAGGATATTGGTTCCTCCAGCAAGATTTGAAGCTTCAAAGCTAAAAGTTGAATTCAGTAGAGAGGTGAAGAAGTGTGCAGGGATCATCCCAAGAACATACATACTATCACACTGTGACTTCACTGCTAATCTCACCTTAACCATCTCTGATGTTATCAACCTTGATCAGTTGAGAGGGTGGTACAACAAGGATGATGTGGTTGCTGAGTGGAAGAAAGTAAAGGATGAAATGTGTCTTCATGTTCATTGCTATGTCAGCGGTCCTAATTCTTTGCTCGACCTTGCTGCAGAGTTTAGATACCACATTTTCTCCAAAGAATTGCCTCTTGTGCTTGAATCTGTCCTGTATGGAGATTCAATATTGTTTGGGGAGAATCCTGAGCTGCTAGATGCCTTGGTCAGGGTATATTTTCATTCTAGCTCGCCGAAGTACAATAGACTCGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGGGAGGCATCATCATATGCAAGGGCTTCTAAGGGGTAGCAAGGACGTGCCCTCTCCTAAAAAGTTGAGTAGCCCAAAATCAATCTTTCAAGCTCTCTTTGCCTTCATTATCTGTACTGCATTGCATAAACTGGTGAACTGA

Protein sequence

MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEASKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDALVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALFAFIICTALHKLVN

Homology

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BLAST of Cp4.1LG13g04320 vs. ExPASy Swiss-Prot
Match: Q94AQ9 (Magnesium dechelatase SGRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGRL PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 5.3e-75
Identity = 142/209 (67.94%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 40  SYNTLVSEAVRILVPPARFEASKLKVEFSREV---KKCAGII-PRTYILSHCDFTANLTL 99
           SYNTLVSEAVR+LVP A F++SKLKVEF  E+   K   GII PRTYILSHCDFTANLTL
Sbjct: 55  SYNTLVSEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTL 114

Query: 100 TISDVINLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKE 159
           TIS+VINLDQL GWY KDDVVAEWKKV DE+ LH+HC VSG + L D+AAE RYHIFSKE
Sbjct: 115 TISNVINLDQLEGWYKKDDVVAEWKKVNDELRLHIHCCVSGMSLLQDVAAELRYHIFSKE 174

Query: 160 LPLVLESVLYGDSILFGENPELLDALVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQG 219
           LPLVL++V++GDS++F ENPEL+DA V VYFHSS+PKYNR+ECWGPLKDA  G+    QG
Sbjct: 175 LPLVLKAVVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECWGPLKDAAKGK---QQG 234

Query: 220 LLRGSKDVPSPKKLSSPKSIFQALFAFII 245
             +G     + +KL   KSIF  LF F++
Sbjct: 235 NHQGFLSSTTSRKLIRHKSIFHTLFTFLL 260

[Close]

BLAST of Cp4.1LG13g04320 vs. ExPASy Swiss-Prot
Match: Q0J8Q3 (Protein STAY-GREEN LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0692600 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.9e-48
Identity = 104/208 (50.00%), Postives = 135/208 (64.90%), Query Frame = 0


Query: 46  SEAVRILVPPARFEASKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQ 105
           S A ++L PP  F+A KL VEF+      +   PR Y L+HCDFTANLTL +SD I  D+
Sbjct: 54  SLAAKLLGPPTSFDAGKLTVEFAHSHGNSSSGFPRAYTLTHCDFTANLTLAVSDTIAADR 113

Query: 106 LRGWYNKDDVVAEWKKVKDE--MCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESV 165
                  DDV AEWK+ + +  M LHVHC+VSG N L  LAA FRY++FSKELPLVL++V
Sbjct: 114 R---LRADDVFAEWKQQQQQEGMALHVHCFVSGANLLHGLAAGFRYYVFSKELPLVLKAV 173

Query: 166 LYGDSILFGENPELLDALVRVYFHSSS-PKYNRLECWGPLKDAVLGRHHHMQGLLRGSKD 225
           ++GD++LF E PELL+A V V+FHSSS  KYNRLECWGPL++A      H +  L    +
Sbjct: 174 VHGDALLFAEQPELLEAKVWVHFHSSSNAKYNRLECWGPLREAANAETTHKRHALEQLHN 233

Query: 226 VPSP------KKLSSPKSIFQALFAFII 245
             +       +K SSP +IF AL A ++
Sbjct: 234 AITKGTRRRRRKWSSPDAIFSALLALLL 258

[Close]

BLAST of Cp4.1LG13g04320 vs. ExPASy Swiss-Prot
Match: Q66WT5 (Magnesium dechelatase SGR2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGR2 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 9.3e-48
Identity = 106/224 (47.32%), Postives = 143/224 (63.84%), Query Frame = 0


Query: 5   CASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEASKLK 64
           C+  + L LP+K K  F  +     LC + RR++    ++V   V  L  PA FEASKLK
Sbjct: 2   CSLATNLLLPSKMKPVFPEKLSTSSLCVTTRRSKMKNRSIV--PVARLFGPAIFEASKLK 61

Query: 65  VEF-SREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNK---DDVVAEWK 124
           V F   + KK    +PRTY L+H D TA LTL IS  IN  QL+GW NK   D+VV EWK
Sbjct: 62  VLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANKLFRDEVVGEWK 121

Query: 125 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 184
           KVK +M LHVHC++SG +  L+L A+ RY+IF KELP+VLE+  +GD  L   +PEL ++
Sbjct: 122 KVKGKMSLHVHCHISGGHFFLNLIAKLRYYIFCKELPVVLEAFAHGDEYLLNNHPELQES 181

Query: 185 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVP 225
            V VYFHS+ P+YN++ECWGPL +A + +H H     + S+ +P
Sbjct: 182 PVWVYFHSNIPEYNKVECWGPLWEA-MSQHQHDGRTHKKSETLP 222

[Close]

BLAST of Cp4.1LG13g04320 vs. ExPASy Swiss-Prot
Match: A2Z3E5 (Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SGR PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.3e-46
Identity = 93/160 (58.13%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 52  LVPPARFEASKLKVEF---SREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 111
           L  PA FEASKLKV F     E  +  G +PRTY L+H D TA LTL +S  IN  QL+G
Sbjct: 51  LFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSHTINRAQLQG 110

Query: 112 WYNK---DDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLY 171
           WYNK   D+VVAEWKKV+  M LHVHC++SG + LLDL A  RY+IF KELP+VL++ ++
Sbjct: 111 WYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKELPVVLKAFVH 170

Query: 172 GDSILFGENPELLDALVRVYFHSSSPKYNRLECWGPLKDA 206
           GD  LF  +PEL +A V VYFHS+ P++NR+ECWGPL+DA
Sbjct: 171 GDGNLFSRHPELEEATVWVYFHSNLPRFNRVECWGPLRDA 210

[Close]

BLAST of Cp4.1LG13g04320 vs. ExPASy Swiss-Prot
Match: Q652K1 (Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SGR PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.3e-46
Identity = 93/160 (58.13%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 52  LVPPARFEASKLKVEF---SREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 111
           L  PA FEASKLKV F     E  +  G +PRTY L+H D TA LTL +S  IN  QL+G
Sbjct: 51  LFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSHTINRAQLQG 110

Query: 112 WYNK---DDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLY 171
           WYNK   D+VVAEWKKV+  M LHVHC++SG + LLDL A  RY+IF KELP+VL++ ++
Sbjct: 111 WYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKELPVVLKAFVH 170

Query: 172 GDSILFGENPELLDALVRVYFHSSSPKYNRLECWGPLKDA 206
           GD  LF  +PEL +A V VYFHS+ P++NR+ECWGPL+DA
Sbjct: 171 GDGNLFSRHPELEEATVWVYFHSNLPRFNRVECWGPLRDA 210

[Close]

BLAST of Cp4.1LG13g04320 vs. NCBI nr
Match: XP_023551158.1 (protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 519 bits (1336), Expect = 8.33e-186
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 240
           LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 240

Query: 241 AFIICTALHKLVN 253
           AFIICTALHKLVN
Sbjct: 241 AFIICTALHKLVN 253

[Close]

BLAST of Cp4.1LG13g04320 vs. NCBI nr
Match: XP_022939533.1 (protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 510 bits (1314), Expect = 1.88e-182
Identity = 249/253 (98.42%), Postives = 250/253 (98.81%), Query Frame = 0


Query: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVL  PAKPKFEFVVRKKPVVLCSSFR TQASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 240
           LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPK+LSSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 240

Query: 241 AFIICTALHKLVN 253
           AFIICTALHKLVN
Sbjct: 241 AFIICTALHKLVN 253

[Close]

BLAST of Cp4.1LG13g04320 vs. NCBI nr
Match: XP_022993907.1 (protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 500 bits (1287), Expect = 2.29e-177
Identity = 245/253 (96.84%), Postives = 246/253 (97.23%), Query Frame = 0


Query: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVL  P KPKFEFVVRKKPVVL  SFR TQASYNTLVSEAVRILVPPARFEA
Sbjct: 62  MAFQCASYSVLPSPTKPKFEFVVRKKPVVLFFSFRTTQASYNTLVSEAVRILVPPARFEA 121

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 122 SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 181

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180
           KVKDEMCLH+HCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA
Sbjct: 182 KVKDEMCLHIHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 241

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 240
           LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF
Sbjct: 242 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 301

Query: 241 AFIICTALHKLVN 253
           AFIICTALH LVN
Sbjct: 302 AFIICTALHILVN 314

[Close]

BLAST of Cp4.1LG13g04320 vs. NCBI nr
Match: KAG6578930.1 (Magnesium dechelatase SGRL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 463 bits (1191), Expect = 4.44e-164
Identity = 224/229 (97.82%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVL  PAKPKFEFVVRKKPVVLCSSFR TQASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKL 229
           LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPK++
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRI 229

[Close]

BLAST of Cp4.1LG13g04320 vs. NCBI nr
Match: XP_038884235.1 (magnesium dechelatase SGRL, chloroplastic [Benincasa hispida])

HSP 1 Score: 442 bits (1136), Expect = 1.85e-155
Identity = 216/244 (88.52%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60
           MAF C  YS    P KP F+ V R  PV+L SSF  T+ASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPTTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKV FSREV K AGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLD+AAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDVAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 240
           LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHH+QGLLRGSKDV SPKKL SPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHVQGLLRGSKDVSSPKKLRSPKSIFQALF 240

Query: 241 AFII 244
           AF++
Sbjct: 241 AFLL 244

[Close]

BLAST of Cp4.1LG13g04320 vs. ExPASy TrEMBL
Match: A0A6J1FLW5 (protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445411 PE=3 SV=1)

HSP 1 Score: 510 bits (1314), Expect = 9.13e-183
Identity = 249/253 (98.42%), Postives = 250/253 (98.81%), Query Frame = 0


Query: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVL  PAKPKFEFVVRKKPVVLCSSFR TQASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFQCASYSVLPSPAKPKFEFVVRKKPVVLCSSFRSTQASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 240
           LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPK+LSSPKSIFQALF
Sbjct: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKRLSSPKSIFQALF 240

Query: 241 AFIICTALHKLVN 253
           AFIICTALHKLVN
Sbjct: 241 AFIICTALHKLVN 253

[Close]

BLAST of Cp4.1LG13g04320 vs. ExPASy TrEMBL
Match: A0A6J1JU75 (protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111489764 PE=3 SV=1)

HSP 1 Score: 500 bits (1287), Expect = 1.11e-177
Identity = 245/253 (96.84%), Postives = 246/253 (97.23%), Query Frame = 0


Query: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60
           MAFQCASYSVL  P KPKFEFVVRKKPVVL  SFR TQASYNTLVSEAVRILVPPARFEA
Sbjct: 62  MAFQCASYSVLPSPTKPKFEFVVRKKPVVLFFSFRTTQASYNTLVSEAVRILVPPARFEA 121

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 122 SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 181

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180
           KVKDEMCLH+HCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA
Sbjct: 182 KVKDEMCLHIHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 241

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 240
           LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF
Sbjct: 242 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 301

Query: 241 AFIICTALHKLVN 253
           AFIICTALH LVN
Sbjct: 302 AFIICTALHILVN 314

[Close]

BLAST of Cp4.1LG13g04320 vs. ExPASy TrEMBL
Match: A0A6J1JL65 (protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486879 PE=3 SV=1)

HSP 1 Score: 439 bits (1128), Expect = 1.48e-154
Identity = 214/244 (87.70%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60
           MAF CA YS    P+KPKF+ V+  KPVVL SS R T+ASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPVVLFSSLRSTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEF+REV KCAGI PRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDL AEFRYHIFSKELPLVLESVLYGDSILF ENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFRENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 240
           LVRVYFHSSS KYNRLECWGPLKDAV GRHHHMQGLLR S+DV SPKKL +PKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKKLRTPKSIFQALF 240

Query: 241 AFII 244
           AF++
Sbjct: 241 AFLL 244

[Close]

BLAST of Cp4.1LG13g04320 vs. ExPASy TrEMBL
Match: A0A6J1H833 (protein STAY-GREEN LIKE, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111461394 PE=3 SV=1)

HSP 1 Score: 437 bits (1124), Expect = 6.03e-154
Identity = 213/244 (87.30%), Postives = 222/244 (90.98%), Query Frame = 0


Query: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60
           MAF CA YS    P+KPKF+ V+  KP VL SS R T+ASYNTLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPAVLFSSLRSTRASYNTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKVEF+REV KCAGI PRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDL AEFRYHIFSKELPLVLESVLYGDSILF ENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFRENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 240
           LVRVYFHSSS KYNRLECWGPLKDAV GRHHHMQGLLR S+DV SPKKL +PKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKKLRTPKSIFQALF 240

Query: 241 AFII 244
           AF++
Sbjct: 241 AFLL 244

[Close]

BLAST of Cp4.1LG13g04320 vs. ExPASy TrEMBL
Match: A0A6J1CHX2 (protein STAY-GREEN LIKE, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011794 PE=3 SV=1)

HSP 1 Score: 436 bits (1122), Expect = 1.22e-153
Identity = 213/244 (87.30%), Postives = 222/244 (90.98%), Query Frame = 0


Query: 1   MAFQCASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEA 60
           MAF CA YS    P KPKF+ V R  P VL SS R T+ASY+TLVSEAVRILVPPARFEA
Sbjct: 1   MAFHCARYSFSPSPGKPKFKLVHRSNPAVLFSSLRTTRASYSTLVSEAVRILVPPARFEA 60

Query: 61  SKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120
           SKLKV  +RE+ K AGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK
Sbjct: 61  SKLKVVLTRELNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWK 120

Query: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 180
           KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDS+LFGENPELLDA
Sbjct: 121 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSVLFGENPELLDA 180

Query: 181 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKKLSSPKSIFQALF 240
           LVRVYFHSSS KYNRLECWGPLKDAVLGRHHHMQGLLRGSKD+ SPKKL SPKSIFQALF
Sbjct: 181 LVRVYFHSSSQKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDMSSPKKLRSPKSIFQALF 240

Query: 241 AFII 244
           AF++
Sbjct: 241 AFLL 244

[Close]

BLAST of Cp4.1LG13g04320 vs. TAIR 10
Match: AT1G44000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 282.3 bits (721), Expect = 3.7e-76
Identity = 142/209 (67.94%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 40  SYNTLVSEAVRILVPPARFEASKLKVEFSREV---KKCAGII-PRTYILSHCDFTANLTL 99
           SYNTLVSEAVR+LVP A F++SKLKVEF  E+   K   GII PRTYILSHCDFTANLTL
Sbjct: 55  SYNTLVSEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTL 114

Query: 100 TISDVINLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKE 159
           TIS+VINLDQL GWY KDDVVAEWKKV DE+ LH+HC VSG + L D+AAE RYHIFSKE
Sbjct: 115 TISNVINLDQLEGWYKKDDVVAEWKKVNDELRLHIHCCVSGMSLLQDVAAELRYHIFSKE 174

Query: 160 LPLVLESVLYGDSILFGENPELLDALVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQG 219
           LPLVL++V++GDS++F ENPEL+DA V VYFHSS+PKYNR+ECWGPLKDA  G+    QG
Sbjct: 175 LPLVLKAVVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECWGPLKDAAKGK---QQG 234

Query: 220 LLRGSKDVPSPKKLSSPKSIFQALFAFII 245
             +G     + +KL   KSIF  LF F++
Sbjct: 235 NHQGFLSSTTSRKLIRHKSIFHTLFTFLL 260

[Close]

BLAST of Cp4.1LG13g04320 vs. TAIR 10
Match: AT4G11910.1 (INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: non-yellowing 1 (TAIR:AT4G22920.1); Has 206 Blast hits to 202 proteins in 67 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 191.8 bits (486), Expect = 6.6e-49
Identity = 106/224 (47.32%), Postives = 143/224 (63.84%), Query Frame = 0


Query: 5   CASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEASKLK 64
           C+  + L LP+K K  F  +     LC + RR++    ++V   V  L  PA FEASKLK
Sbjct: 2   CSLATNLLLPSKMKPVFPEKLSTSSLCVTTRRSKMKNRSIV--PVARLFGPAIFEASKLK 61

Query: 65  VEF-SREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNK---DDVVAEWK 124
           V F   + KK    +PRTY L+H D TA LTL IS  IN  QL+GW NK   D+VV EWK
Sbjct: 62  VLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANKLFRDEVVGEWK 121

Query: 125 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 184
           KVK +M LHVHC++SG +  L+L A+ RY+IF KELP+VLE+  +GD  L   +PEL ++
Sbjct: 122 KVKGKMSLHVHCHISGGHFFLNLIAKLRYYIFCKELPVVLEAFAHGDEYLLNNHPELQES 181

Query: 185 LVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVP 225
            V VYFHS+ P+YN++ECWGPL +A + +H H     + S+ +P
Sbjct: 182 PVWVYFHSNIPEYNKVECWGPLWEA-MSQHQHDGRTHKKSETLP 222

[Close]

BLAST of Cp4.1LG13g04320 vs. TAIR 10
Match: AT4G22920.1 (non-yellowing 1 )

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-46
Identity = 104/220 (47.27%), Postives = 140/220 (63.64%), Query Frame = 0


Query: 5   CASYSVLRLPAKPKFEFVVRKKPVVLCSSF----RRTQASYNTLVSEAVRILVPPARFEA 64
           C+  +++ LP K K  +  ++      SS     RR++    ++V   V  L  PA FE+
Sbjct: 2   CSLSAIMLLPTKLKPAYSDKRSNSSSSSSLFFNNRRSKKKNQSIV--PVARLFGPAIFES 61

Query: 65  SKLKVEF-SREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYN---KDDVV 124
           SKLKV F   + KK    +PRTY L+H D TA LTL IS  IN  QL+GW N   +D+VV
Sbjct: 62  SKLKVLFLGVDEKKHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANRLYRDEVV 121

Query: 125 AEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPE 184
           AEWKKVK +M LHVHC++SG + LLDL A+FRY IF KELP+VL++ ++GD  L    PE
Sbjct: 122 AEWKKVKGKMSLHVHCHISGGHFLLDLFAKFRYFIFCKELPVVLKAFVHGDGNLLNNYPE 181

Query: 185 LLDALVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGL 217
           L +ALV VYFHS+  ++N++ECWGPL +AV    H  + L
Sbjct: 182 LQEALVWVYFHSNVNEFNKVECWGPLWEAVSPDGHKTETL 219

[Close]

BLAST of Cp4.1LG13g04320 vs. TAIR 10
Match: AT4G11911.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 176.4 bits (446), Expect = 2.9e-44
Identity = 96/205 (46.83%), Postives = 131/205 (63.90%), Query Frame = 0


Query: 5   CASYSVLRLPAKPKFEFVVRKKPVVLCSSFRRTQASYNTLVSEAVRILVPPARFEASKLK 64
           C+  + L LPA  K +F  +++   + S+ R ++    ++    V  L   A FEASKL 
Sbjct: 2   CSLMASLLLPANLKPDFSDKERSSSIPSTTRSSKRKKQSMF--PVARLFGQAIFEASKLN 61

Query: 65  VEF-SREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYN---KDDVVAEWK 124
           V+F   + KK    +PRTY  +H D TA LTL IS  IN  QL+GW N   +D+VVAEW+
Sbjct: 62  VKFLGVDEKKHPPNLPRTYTFTHSDITAKLTLAISHSINNSQLQGWANRLYRDEVVAEWR 121

Query: 125 KVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDA 184
           KVK  M LHVHC++SG + LLDL AE RY IF KELP+VL++ ++GD  +    PEL +A
Sbjct: 122 KVKSNMSLHVHCHISGDHFLLDLIAELRYFIFCKELPMVLKAFVHGDENMLNNYPELHEA 181

Query: 185 LVRVYFHSSSPKYNRLECWGPLKDA 206
            V VYFHS+ PK+N++ECWG L +A
Sbjct: 182 FVWVYFHSNIPKFNKVECWGRLCEA 204

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g04320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AQ9	5.3e-75	67.94	Magnesium dechelatase SGRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGR...	[more]
Q0J8Q3	1.9e-48	50.00	Protein STAY-GREEN LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q66WT5	9.3e-48	47.32	Magnesium dechelatase SGR2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGR...	[more]
A2Z3E5	1.3e-46	58.13	Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SGR ...	[more]
Q652K1	1.3e-46	58.13	Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SG...	[more]

BLAST of Cp4.1LG13g04320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551158.1	8.33e-186	100.00	protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939533.1	1.88e-182	98.42	protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita moschata]	[more]
XP_022993907.1	2.29e-177	96.84	protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita maxima]	[more]
KAG6578930.1	4.44e-164	97.82	Magnesium dechelatase SGRL, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]
XP_038884235.1	1.85e-155	88.52	magnesium dechelatase SGRL, chloroplastic [Benincasa hispida]	[more]

BLAST of Cp4.1LG13g04320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FLW5	9.13e-183	98.42	protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JU75	1.11e-177	96.84	protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1JL65	1.48e-154	87.70	protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H833	6.03e-154	87.30	protein STAY-GREEN LIKE, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1CHX2	1.22e-153	87.30	protein STAY-GREEN LIKE, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Cp4.1LG13g04320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44000.1	3.7e-76	67.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G11910.1	6.6e-49	47.32	INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidops...	[more]
AT4G22920.1	1.1e-46	47.27	non-yellowing 1	[more]
AT4G11911.1	2.9e-44	46.83	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024438	Staygreen protein	PFAM	PF12638	Staygreen	coord: 57..205 e-value: 2.7E-60 score: 202.4
None	No IPR available	PANTHER	PTHR31750:SF18	PROTEIN STAY-GREEN LIKE, CHLOROPLASTIC	coord: 22..243
None	No IPR available	PANTHER	PTHR31750	PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED	coord: 22..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g04320.1	Cp4.1LG13g04320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0016021	integral component of membrane