Cp4.1LG13g04180 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTATTCCATGGCTAATCTATACATTGTTATTTTGGTAGCATCTATTGCTGTAAGGCCACCGTCGGCAACCACCGCAAGCGCCGTCGTTGACCCTTCTCCTCTGCCGCCGCCAATCTACCATTCAGCTTCTGGGACACTATCATTTGGCCGTTCTATCAAAATTAGCCTTGAAGAGAAGGCAGACGAATCTGAACCACCACCACCATCATTCAAGGTTAGAAGGGGTCCCAGACGACCATGGCCTAAGAAACCTGTCGCCAAATCGCCACCGCCTCCATTTTAG ATGGGGTATTCCATGGCTAATCTATACATTGTTATTTTGGTAGCATCTATTGCTGTAAGGCCACCGTCGGCAACCACCGCAAGCGCCGTCGTTGACCCTTCTCCTCTGCCGCCGCCAATCTACCATTCAGCTTCTGGGACACTATCATTTGGCCGTTCTATCAAAATTAGCCTTGAAGAGAAGGCAGACGAATCTGAACCACCACCACCATCATTCAAGGTTAGAAGGGGTCCCAGACGACCATGGCCTAAGAAACCTGTCGCCAAATCGCCACCGCCTCCATTTTAG ATGGGGTATTCCATGGCTAATCTATACATTGTTATTTTGGTAGCATCTATTGCTGTAAGGCCACCGTCGGCAACCACCGCAAGCGCCGTCGTTGACCCTTCTCCTCTGCCGCCGCCAATCTACCATTCAGCTTCTGGGACACTATCATTTGGCCGTTCTATCAAAATTAGCCTTGAAGAGAAGGCAGACGAATCTGAACCACCACCACCATCATTCAAGGTTAGAAGGGGTCCCAGACGACCATGGCCTAAGAAACCTGTCGCCAAATCGCCACCGCCTCCATTTTAG MGYSMANLYIVILVASIAVRPPSATTASAVVDPSPLPPPIYHSASGTLSFGRSIKISLEEKADESEPPPPSFKVRRGPRRPWPKKPVAKSPPPPF Homology
BLAST of Cp4.1LG13g04180 vs. NCBI nr
Match: KAG6578899.1 (hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 159 bits (403), Expect = 1.34e-48 Identity = 88/103 (85.44%), Postives = 90/103 (87.38%), Query Frame = 0
BLAST of Cp4.1LG13g04180 vs. NCBI nr
Match: KAG6578898.1 (hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 97.8 bits (242), Expect = 3.65e-24 Identity = 59/96 (61.46%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Cp4.1LG13g04180 vs. NCBI nr
Match: KAA0054914.1 (hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa] >TYK22702.1 hypothetical protein E5676_scaffold1163G00190 [Cucumis melo var. makuwa]) HSP 1 Score: 63.2 bits (152), Expect = 1.60e-10 Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0
BLAST of Cp4.1LG13g04180 vs. NCBI nr
Match: KAE8646678.1 (hypothetical protein Csa_023589, partial [Cucumis sativus]) HSP 1 Score: 58.2 bits (139), Expect = 9.95e-09 Identity = 39/88 (44.32%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of Cp4.1LG13g04180 vs. NCBI nr
Match: KAE8637368.1 (hypothetical protein CSA_004461, partial [Cucumis sativus]) HSP 1 Score: 51.2 bits (121), Expect = 6.08e-06 Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = 0
BLAST of Cp4.1LG13g04180 vs. ExPASy TrEMBL
Match: A0A0A0K9K2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058720 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.38e-12 Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of Cp4.1LG13g04180 vs. ExPASy TrEMBL
Match: A0A5A7UIB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00190 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 7.73e-11 Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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