Cp4.1LG13g03710 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g03710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	leucine-rich repeat extensin-like protein 3
Location	Cp4.1LG13: 4084831 .. 4085217 (+)
RNA-Seq Expression	Cp4.1LG13g03710
Synteny	Cp4.1LG13g03710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCCTCTCTACTTTCTCCTCCTCCTCCTCCTCCTAATTTCCCCCTCCTCCACCACCGCCGCCAACCTCCGCCGCCTCGACGACTCCCCCGTCAAGTGTACCCCATGCGAGCAAAACCCCCCATCTCTCCCGCCGCCGATCTACCCCTCACCCCCACCGCCGTCTCCTCCGCCTCCTGACCTCCTCCCCTACTACTCTCCCCCACCGCCCAAGAAGAAGGACCACAAGAACCCCAACTGCCCTCCGCCTCCGCCTTCCGCGTTCATGTACATAACCGGCCCTCCCGGCGACCTCTATCCCATCGATCAGAATTTCAACGCCGCCGGCCGGAGATCCACCGCCGCCGTGATTTGGCTTGTTCTGGCCGGGCTTCTCTTGGTTTAA

mRNA sequence

ATGCTCCCTCTCTACTTTCTCCTCCTCCTCCTCCTCCTAATTTCCCCCTCCTCCACCACCGCCGCCAACCTCCGCCGCCTCGACGACTCCCCCGTCAAGTGTACCCCATGCGAGCAAAACCCCCCATCTCTCCCGCCGCCGATCTACCCCTCACCCCCACCGCCGTCTCCTCCGCCTCCTGACCTCCTCCCCTACTACTCTCCCCCACCGCCCAAGAAGAAGGACCACAAGAACCCCAACTGCCCTCCGCCTCCGCCTTCCGCGTTCATGTACATAACCGGCCCTCCCGGCGACCTCTATCCCATCGATCAGAATTTCAACGCCGCCGGCCGGAGATCCACCGCCGCCGTGATTTGGCTTGTTCTGGCCGGGCTTCTCTTGGTTTAA

Coding sequence (CDS)

ATGCTCCCTCTCTACTTTCTCCTCCTCCTCCTCCTCCTAATTTCCCCCTCCTCCACCACCGCCGCCAACCTCCGCCGCCTCGACGACTCCCCCGTCAAGTGTACCCCATGCGAGCAAAACCCCCCATCTCTCCCGCCGCCGATCTACCCCTCACCCCCACCGCCGTCTCCTCCGCCTCCTGACCTCCTCCCCTACTACTCTCCCCCACCGCCCAAGAAGAAGGACCACAAGAACCCCAACTGCCCTCCGCCTCCGCCTTCCGCGTTCATGTACATAACCGGCCCTCCCGGCGACCTCTATCCCATCGATCAGAATTTCAACGCCGCCGGCCGGAGATCCACCGCCGCCGTGATTTGGCTTGTTCTGGCCGGGCTTCTCTTGGTTTAA

Protein sequence

MLPLYFLLLLLLLISPSSTTAANLRRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPPDLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAVIWLVLAGLLLV

Homology

[Close]

BLAST of Cp4.1LG13g03710 vs. NCBI nr
Match: XP_023550897.1 (extensin-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241 bits (614), Expect = 1.18e-79
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MLPLYFLLLLLLLISPSSTTAANLRRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP 60
           MLPLYFLLLLLLLISPSSTTAANLRRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP
Sbjct: 14  MLPLYFLLLLLLLISPSSTTAANLRRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP 73

Query: 61  DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAVIWL 120
           DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAVIWL
Sbjct: 74  DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAVIWL 133

Query: 121 VLAGLLLV 128
           VLAGLLLV
Sbjct: 134 VLAGLLLV 141

[Close]

BLAST of Cp4.1LG13g03710 vs. NCBI nr
Match: XP_022939204.1 (formin-like protein 3 [Cucurbita moschata])

HSP 1 Score: 236 bits (603), Expect = 1.25e-77
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MLPLYFLLLLLLLISPSSTTAANLRRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP 60
           MLPLYFLLLLLLLISPSSTTAAN RRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP
Sbjct: 38  MLPLYFLLLLLLLISPSSTTAANPRRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP 97

Query: 61  DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAVIWL 120
           DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAV+WL
Sbjct: 98  DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAVVWL 157

Query: 121 VLAGLLLV 128
           +LAGLLLV
Sbjct: 158 LLAGLLLV 165

[Close]

BLAST of Cp4.1LG13g03710 vs. NCBI nr
Match: KAG6579236.1 (hypothetical protein SDJN03_23684, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016751.1 hypothetical protein SDJN02_21861, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229 bits (583), Expect = 3.96e-75
Identity = 123/128 (96.09%), Postives = 125/128 (97.66%), Query Frame = 0


Query: 1   MLPLYFLLLLLLLISPSSTTAANLRRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP 60
           MLPLYFLL LLLLISPSSTTAAN RRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP
Sbjct: 1   MLPLYFLL-LLLLISPSSTTAANPRRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP 60

Query: 61  DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAVIWL 120
           DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAA RRSTAAV+WL
Sbjct: 61  DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAASRRSTAAVVWL 120

Query: 121 VLAGLLLV 128
           +LAGLLLV
Sbjct: 121 LLAGLLLV 127

[Close]

BLAST of Cp4.1LG13g03710 vs. NCBI nr
Match: XP_008467156.1 (PREDICTED: extensin-like [Cucumis melo])

HSP 1 Score: 169 bits (429), Expect = 1.76e-51
Identity = 104/139 (74.82%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   MLPLYFLLLL--LLLISPSST-TAANLRRLDDSP------VKCTPCEQNPPSLPPP-IYP 60
           MLPL FLL L  LLLISPSS  T+A +RRLDD+       VKC PCEQNPPS PPP +YP
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSATVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPLVYP 60

Query: 61  SPPPPSPPPPDLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAG 120
           SPPPPSPPPPD++PYYSPPPPKKK+ KNPNCPPPP  +FMYITGPPGDLYPIDQN+NAAG
Sbjct: 61  SPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPIDQNYNAAG 120

Query: 121 RRSTAAV-IWLVLAGLLLV 128
           RRS AA  + +VLAGLLLV
Sbjct: 121 RRSAAAAAVGVVLAGLLLV 139

[Close]

BLAST of Cp4.1LG13g03710 vs. NCBI nr
Match: XP_004150475.1 (leucine-rich repeat extensin-like protein 6 [Cucumis sativus] >KGN51515.1 hypothetical protein Csa_009313 [Cucumis sativus])

HSP 1 Score: 168 bits (426), Expect = 4.89e-51
Identity = 101/138 (73.19%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 1   MLPLYFLLLL--LLLISPSST-TAANLRRLDDSP------VKCTPCEQNPPSLPPPI-YP 60
           MLPL FLL L  LLLISPSS  T+  +RRLDD+       VKC PCEQNPPS PPP+ YP
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYP 60

Query: 61  SPPPPSPPPPDLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAG 120
           SPPPPSPPPPD++PYYSPPPPKKK+ K+PNCPPPP  +FMYITGPPGDLYPIDQ +NAAG
Sbjct: 61  SPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDQGYNAAG 120

Query: 121 RRSTAAVIWLVLAGLLLV 128
           RRS A V+ +VLAGLLLV
Sbjct: 121 RRSAATVVGVVLAGLLLV 138

[Close]

BLAST of Cp4.1LG13g03710 vs. ExPASy TrEMBL
Match: A0A6J1FGG4 (formin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111445191 PE=4 SV=1)

HSP 1 Score: 236 bits (603), Expect = 6.07e-78
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MLPLYFLLLLLLLISPSSTTAANLRRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP 60
           MLPLYFLLLLLLLISPSSTTAAN RRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP
Sbjct: 38  MLPLYFLLLLLLLISPSSTTAANPRRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPP 97

Query: 61  DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAVIWL 120
           DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAV+WL
Sbjct: 98  DLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAVVWL 157

Query: 121 VLAGLLLV 128
           +LAGLLLV
Sbjct: 158 LLAGLLLV 165

[Close]

BLAST of Cp4.1LG13g03710 vs. ExPASy TrEMBL
Match: A0A1S3CT22 (extensin-like OS=Cucumis melo OX=3656 GN=LOC103504576 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 8.54e-52
Identity = 104/139 (74.82%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   MLPLYFLLLL--LLLISPSST-TAANLRRLDDSP------VKCTPCEQNPPSLPPP-IYP 60
           MLPL FLL L  LLLISPSS  T+A +RRLDD+       VKC PCEQNPPS PPP +YP
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSATVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPLVYP 60

Query: 61  SPPPPSPPPPDLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAG 120
           SPPPPSPPPPD++PYYSPPPPKKK+ KNPNCPPPP  +FMYITGPPGDLYPIDQN+NAAG
Sbjct: 61  SPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPIDQNYNAAG 120

Query: 121 RRSTAAV-IWLVLAGLLLV 128
           RRS AA  + +VLAGLLLV
Sbjct: 121 RRSAAAAAVGVVLAGLLLV 139

[Close]

BLAST of Cp4.1LG13g03710 vs. ExPASy TrEMBL
Match: A0A0A0KPJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571580 PE=4 SV=1)

HSP 1 Score: 168 bits (426), Expect = 2.37e-51
Identity = 101/138 (73.19%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 1   MLPLYFLLLL--LLLISPSST-TAANLRRLDDSP------VKCTPCEQNPPSLPPPI-YP 60
           MLPL FLL L  LLLISPSS  T+  +RRLDD+       VKC PCEQNPPS PPP+ YP
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYP 60

Query: 61  SPPPPSPPPPDLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAG 120
           SPPPPSPPPPD++PYYSPPPPKKK+ K+PNCPPPP  +FMYITGPPGDLYPIDQ +NAAG
Sbjct: 61  SPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDQGYNAAG 120

Query: 121 RRSTAAVIWLVLAGLLLV 128
           RRS A V+ +VLAGLLLV
Sbjct: 121 RRSAATVVGVVLAGLLLV 138

[Close]

BLAST of Cp4.1LG13g03710 vs. ExPASy TrEMBL
Match: A0A6J1GMY1 (extensin OS=Cucurbita moschata OX=3662 GN=LOC111455867 PE=4 SV=1)

HSP 1 Score: 153 bits (386), Expect = 2.79e-45
Identity = 92/127 (72.44%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 10  LLLLISPSSTTAANLRRLDDSP----VKCTPCEQNPPSLPPP-IYPSPPPPSPPPPDLLP 69
           LLLLISPSS++AA +RRLDD+P    VKC+PCEQNPPS PPP +YPSPPPPSPPPPD++ 
Sbjct: 12  LLLLISPSSSSAA-VRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPPPSPPPPDVVI 71

Query: 70  YYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRR--STAA--VIWL 127
           YYSPPPP KKDHKN +CPPPP   FMYITGPPGDLYPIDQ++NAA RR  STAA  V+ L
Sbjct: 72  YYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAASRRLVSTAASAVVGL 131

[Close]

BLAST of Cp4.1LG13g03710 vs. ExPASy TrEMBL
Match: A0A6J1JNW0 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111487018 PE=4 SV=1)

HSP 1 Score: 150 bits (378), Expect = 5.21e-44
Identity = 91/133 (68.42%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 10  LLLLISPSSTTAANLRRLDDSPV---------KCTPCEQNPPSLPPP-IYPSPPPPSPPP 69
           LLLLISPSS++AA +RRLDD+PV         KC+PCEQNPPS PPP +YPSPPPPSPPP
Sbjct: 12  LLLLISPSSSSAA-VRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVYPSPPPPSPPP 71

Query: 70  PDLLPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRR----STA 128
           PD++ YYSPPPPKK DHKN +CPPPP   FMYITGPPGDLYPIDQN+NAA RR    + +
Sbjct: 72  PDVVVYYSPPPPKK-DHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAARRLVSAAAS 131

[Close]

BLAST of Cp4.1LG13g03710 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15
Identity = 65/124 (52.42%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 7   LLLLLLLISPSSTTAANL--RRLDD-SPVKCTP-CEQNPPSLPPPIYPSPPPPSPPPPDL 66
           LL    LI+ SS++ A+L  R+LD+  P+KC+P C QNPP  P P  PSPPPP+ PPP  
Sbjct: 21  LLTCPTLINGSSSSDASLEARKLDEVDPIKCSPSCIQNPPP-PSPPPPSPPPPACPPPPA 80

Query: 67  LPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAVIWLVL 126
           LP   PPPPKK    +  CPPPPP+ F+YITGPPG+LYP+D+ F AA  +S   V    L
Sbjct: 81  LP---PPPPKK---VSSYCPPPPPANFLYITGPPGNLYPVDEQFGAAAGKSFMVV---KL 134

[Close]

BLAST of Cp4.1LG13g03710 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein )

HSP 1 Score: 74.7 bits (182), Expect = 6.0e-14
Identity = 58/115 (50.43%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 7   LLLLLLLISPSSTTAANLRRLDDSPVKCTPCEQN-PPSLPPPIYPSPPPPS---PPPPDL 66
           + L   +I  +S ++ N R+L++ P+KCTPC QN PP  PPP  PSPPPPS   PPPP  
Sbjct: 58  VFLTFPMIINASDSSTN-RKLEEDPIKCTPCLQNIPPPSPPP--PSPPPPSQACPPPP-- 117

Query: 67  LPYYSPPPPKKKDHKNPNCPPPPPSAFMYITGPPGDLYPIDQNFNAAGRRSTAAV 118
                PP P KK +    C PPPPS ++Y+TGPPG+LYPIDQ F AA  +S   V
Sbjct: 118 ----LPPSPPKKSY----C-PPPPSTYIYMTGPPGELYPIDQQFGAAVTKSFTVV 158

[Close]

BLAST of Cp4.1LG13g03710 vs. TAIR 10
Match: AT1G02405.1 (proline-rich family protein )

HSP 1 Score: 50.8 bits (120), Expect = 9.2e-07
Identity = 55/127 (43.31%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 7   LLLLLLLISPSSTTAANLRRLDDSPVKCTPCEQNPPSLPPPIYPSPPP----PSPPPPDL 66
           L+ +++L SP    A +     D  V C PC QN P  PPP  PSPPP    PSPPPP  
Sbjct: 16  LMAIVILASPIIINAEDSSAEVD--VNCIPCLQNQP--PPP--PSPPPPSCTPSPPPP-- 75

Query: 67  LPYYSPPPPKKKD-HKNPNCPPPPPSAFMYI-TGPPGDLYPIDQNFNAAGRRSTAAVIWL 126
               SPPPPKK     +P  PPPPP    Y+ T PPGDLYPI+  + AA    + +V+ L
Sbjct: 76  ----SPPPPKKSSCPPSPLPPPPPPPPPNYVFTYPPGDLYPIENYYGAAVAVESFSVMKL 130

Query: 127 VLAGLLL 128
            + G+++
Sbjct: 136 FVFGVMV 130

[Close]

BLAST of Cp4.1LG13g03710 vs. TAIR 10
Match: AT3G22800.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 36/88 (40.91%), Postives = 45/88 (51.14%), Query Frame = 0


Query: 16  PSSTTAANLRRLDDSPVKCTPCEQNPPSLPPPIYPSPPPPSPPPPDLLPYYSPPPPKKKD 75
           P   + A  +     P+ C     +PPS PPP  P PPPP PPPP   P   PPPP    
Sbjct: 351 PMQRSLAECKSFSSYPIDCASFGCSPPSPPPPPPPPPPPPPPPPP---PPPPPPPPPPPP 410

Query: 76  HKNPNCPPPPPS--AFMYITGPPGDLYP 102
           +  P+ PPPPPS   ++Y   PP  +YP
Sbjct: 411 YVYPSPPPPPPSPPPYVYPPPPPPYVYP 435

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g03710 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG13g03710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550897.1	1.18e-79	100.00	extensin-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939204.1	1.25e-77	97.66	formin-like protein 3 [Cucurbita moschata]	[more]
KAG6579236.1	3.96e-75	96.09	hypothetical protein SDJN03_23684, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008467156.1	1.76e-51	74.82	PREDICTED: extensin-like [Cucumis melo]	[more]
XP_004150475.1	4.89e-51	73.19	leucine-rich repeat extensin-like protein 6 [Cucumis sativus] >KGN51515.1 hypoth...	[more]

BLAST of Cp4.1LG13g03710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGG4	6.07e-78	97.66	formin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111445191 PE=4 SV=1	[more]
A0A1S3CT22	8.54e-52	74.82	extensin-like OS=Cucumis melo OX=3656 GN=LOC103504576 PE=4 SV=1	[more]
A0A0A0KPJ1	2.37e-51	73.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571580 PE=4 SV=1	[more]
A0A6J1GMY1	2.79e-45	72.44	extensin OS=Cucurbita moschata OX=3662 GN=LOC111455867 PE=4 SV=1	[more]
A0A6J1JNW0	5.21e-44	68.42	leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Cp4.1LG13g03710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23040.1	1.1e-15	52.42	hydroxyproline-rich glycoprotein family protein	[more]
AT1G70990.1	6.0e-14	50.43	proline-rich family protein	[more]
AT1G02405.1	9.2e-07	43.31	proline-rich family protein	[more]
AT3G22800.1	1.1e-04	40.91	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..88
None	No IPR available	PANTHER	PTHR35094:SF1	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 6..127
None	No IPR available	PANTHER	PTHR35094	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 6..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g03710.1	Cp4.1LG13g03710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane