Cp4.1LG13g02370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g02370
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Autophagy-related protein
Location	Cp4.1LG13: 1801570 .. 1804605 (-)
RNA-Seq Expression	Cp4.1LG13g02370
Synteny	Cp4.1LG13g02370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATTAATAGTTGAATATCACAATCAGATAAATGGTTTTAAAAATAAGAAAAATTATTGAACACCGAAGCAACGCCACCGTGAAGGCTTCTCTCCCTCTCTCTCATCTCTCTTTTATCTGTAATTCAATCAAGCTCGATTCTCGCAAAATTTCTCGGCCAAAAATCATTTCCTTTTTCGTTACCGGATAATTGGCTCCAATTTTTACTCTCAGCTGCGTTCGCTCCTCGATTGATTTTGCTCAACTCTCTCGTAAGTTTGTTCTTTCTCAGTCGATGATCGTTGATTTTATCTGTTAGTTCTTCTATCAATTCCACGATCTACTTGATCATCTGCTGAGTTTCTTATTCTTTGATTCACCGATTGTTTATCATCATGCGATGATTGAATGTTTGAATTCGATTCCGTGAGTTTAATTTCTTGTTGTTGGTTGATTGGGAAAGTTGAAAAAGTTTGTTGCGCTGTCGAGTTTAGCGGACTGGTGAATTTCTAGGTTGTTTTCCGCTATTCTGTTGCTCACGATTATATTTATTGCGTTAATTATGGGGATTTTTAGCCTTTTATCGTTGGGTGTTGATTTTAATGTTCATATTTTTCGCTTTGCCAGTTTACCTACTGTTTATAATTTTGTGATTGCGTCTTTTAAATTTAAAACTTAAGGAGTCCGACTTTTGTGGATTGTAGTTTCAGCGCTGATGGCTAAGAGCTACTTCAAGCAAGAGCATGATCTTGGTAGTCTTCTACTCCATGCTTTGAAATATTATATAAAGTTCAGTTTATAAGATAAGAACTGATAAGTTTTCCATGTTTGTTTTATTAGAGAAAAGAAAAGCAGAGGCCGCAAGGATTAGAGAGAAATATCCTGATAGAATCCCAGTAAGAAATGATATTATTTTGTTACCGTGATTTGATTGCCTATTTGTTATCATCAACTTGATATTCAAATTTTGTTTTGCCATAGCTTTGATGTTCTGAATCAATTACTTCTATTAGGCAATGAGTCAAATTTGTTCTGAATTCGAAGCTATCGATGTATCTGCGTTAATCAGTTGAACAATGTTTAGGTTGATAGGAAGTAATCGACTGATGATAATGTTTTCTTTGATTTTGTTCCTGAAACGTGGATAACGAACAGTGACGATTATGGTGTTACTTGTTTAGCAGTAGTGGGTTGTTTATAATGAGAATATGCAAATTGTCTCGAGATAAAGGCAGTTCATCTGTTGTATTTTTGTTTATGAATGGTTTTAGTTATAATTGTGTTCTTATGGTTTGAAGGTTATAGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAGTACGAATCACCAGCATCCATTTAAACTTGAATTTCATGCTTCTGTGTTGGAATTTATGTTCAATGACTGCAATTAAAGAGAGTTTTCTCTTTTTGATTGATGCTTGAAAGCTCTTCTTCATATCTTTGAAAGTGGCCTTTCTTTAGTTCTTAAAATTATGCTTCAGTTTCTCATGAACAATTTCAATTTAAATCACGGACCCTTCACAATGGTAATGATATGCTCCTTCTTGAGCATAAGCTCTCATGGTTTTACTTTTGGTTTCTCCAAAAGGCCTCATTCTAATCTAATGGAGATGGATTCTTTATTTACAAACCCATAGTCCCATAGTGCATCCCAACAATCCTCAACAATCCTCCCCTAGTACACCATAGAGCTTCCCCGGAGGCCTATGGAGCCCTCAAACAGCCTCCCTCGATTGGCTTGACTCCTTTTTCTGGAGTCCTCGAACAAAGTACACCCTTTGTTTCACCCTTGACTACACTTTTGAGTCTCTAAACTTTTTTGTTGGACACTTGAGGATTCTATTGACATGGCTAAGTTAAGGACATGACTTTGATACCATTTTAGGAATCATGGACCCTCCACAATGGTATGATATTATCCACTTTGAGCATAAACTCTCGTGGCTTTACTCTTGGTTTCTTCAGGAGGCCTTATTCCAATGGAGATATATTCCTTACTTATAACCCATGATCATCTCTTCTTTACTTTTGGTTTCTTCAGGAGGCCTTATTCCAATGGAGATATATTCCTTACTTATAACCCATGATCATCTCTTTAATTAGCCAATGCGGGAATTCACTCCCAAAAATCCTCAACACAATTGGCAAACCATGCCTTGACCTCTTTCTCTTTCTGTAGCTAAGATTTTGATGCAACGACTGCAGGTACCTAGTTCCAGCAGACCTTACCGTCGGACAGTTTGTTTATGTCATCCGTAAAAGGATTAAACTCAGCCCAGAGAAAGCGATCTTTATCTTCGTCGACAATGTCCTCCCTCCTACAGGTACATCCTTTTCCTCTATTATATATTGTAGGATATGTCTTGGGACAACTTTTGAAAATGAAATTCCACATGATCAACAAGTTCGTTTAACAGATTTCGATAAAGCTGCTTCCTGGAATACGTCATGTGACTATGATCTATCATAATCACCACATTTTACTGTTAGTACACATAGCACCCACAAGTAACAATTTTATTGAAGATAACAGAAAACTTAAACATTGAGTATCTATTAACTTGTTATACTCAACGTGGCTGAACAAATCACATAATCCTTCCTTCTTAAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTCCTGTATGTTACTTACAGTGGAGAGAACACGTTCGGGTTCGGGTGGTAGCGGGCTTGTGTGACAGACTTGATTGTCGTCGTCATCTCCTTCTCTATTCTTCTGGTCTCTTTGCCTCTTGCTATTGCTGCTTGTTCTTCTAGTCCATGGATTCTAGCAAGTGATATCCTGTACAGCTTTACATAATGAATAAAAATTGTGAAAACATCTCCACACCCAAAAGTTCCTGCTTCAGATATTGTCTTTATAATTCCTTTTGTGCCCCTTTTTTTGTGGGGCATTTCTTATCTTTATGTGCATGTAGATTTCAAAGAAACTCACCACAATTAGATTGAATTATGAAAATATTCTTAAATTAGTTT

mRNA sequence

TGATTAATAGTTGAATATCACAATCAGATAAATGGTTTTAAAAATAAGAAAAATTATTGAACACCGAAGCAACGCCACCGTGAAGGCTTCTCTCCCTCTCTCTCATCTCTCTTTTATCTGTAATTCAATCAAGCTCGATTCTCGCAAAATTTCTCGGCCAAAAATCATTTCCTTTTTCGTTACCGGATAATTGGCTCCAATTTTTACTCTCAGCTGCGTTCGCTCCTCGATTGATTTTGCTCAACTCTCTCTTTCAGCGCTGATGGCTAAGAGCTACTTCAAGCAAGAGCATGATCTTGAGAAAAGAAAAGCAGAGGCCGCAAGGATTAGAGAGAAATATCCTGATAGAATCCCAGTTATAGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAGTACCTAGTTCCAGCAGACCTTACCGTCGGACAGTTTGTTTATGTCATCCGTAAAAGGATTAAACTCAGCCCAGAGAAAGCGATCTTTATCTTCGTCGACAATGTCCTCCCTCCTACAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTCCTGTATGTTACTTACAGTGGAGAGAACACGTTCGGGTTCGGGTGGTAGCGGGCTTGTGTGACAGACTTGATTGTCGTCGTCATCTCCTTCTCTATTCTTCTGGTCTCTTTGCCTCTTGCTATTGCTGCTTGTTCTTCTAGTCCATGGATTCTAGCAAGTGATATCCTGTACAGCTTTACATAATGAATAAAAATTGTGAAAACATCTCCACACCCAAAAGTTCCTGCTTCAGATATTGTCTTTATAATTCCTTTTGTGCCCCTTTTTTTGTGGGGCATTTCTTATCTTTATGTGCATGTAGATTTCAAAGAAACTCACCACAATTAGATTGAATTATGAAAATATTCTTAAATTAGTTT

Coding sequence (CDS)

ATGGCTAAGAGCTACTTCAAGCAAGAGCATGATCTTGAGAAAAGAAAAGCAGAGGCCGCAAGGATTAGAGAGAAATATCCTGATAGAATCCCAGTTATAGTGGAGAAGGCAGAGAGAAGTGACATCCCTAGCATTGATAAGAAGAAGTACCTAGTTCCAGCAGACCTTACCGTCGGACAGTTTGTTTATGTCATCCGTAAAAGGATTAAACTCAGCCCAGAGAAAGCGATCTTTATCTTCGTCGACAATGTCCTCCCTCCTACAGGAGCAATCATGTCTGCAATATATGAAGAGAAGAAGGATGAAGATGGATTCCTGTATGTTACTTACAGTGGAGAGAACACGTTCGGGTTCGGGTGGTAG

Protein sequence

MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW

Homology

[Close]

BLAST of Cp4.1LG13g02370 vs. ExPASy Swiss-Prot
Match: Q8VYK7 (Autophagy-related protein 8f OS=Arabidopsis thaliana OX=3702 GN=ATG8F PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.5e-56
Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKS FKQEHDLEKR+AEAARIREKYPDRIPVIVEKAE+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFG 120
           FVYVIRKRIKLS EKAIFIFVDNVLPP GA+MS++YEEKKD+DGFLYVTYSGENTFGFG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGFG 119

[Close]

BLAST of Cp4.1LG13g02370 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 6.6e-52
Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKS FK EH LE+R+AEAARIREKYPDRIPVIVEKAERSDIP IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYV+RKRIKLS EKAIFIFV N+LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Cp4.1LG13g02370 vs. ExPASy Swiss-Prot
Match: Q9SL04 (Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 3.3e-51
Identity = 100/117 (85.47%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MA S FK EH LEKR+AEAARIREKYPDRIPVIVE+AE+SD+P ID+KKYLVPADLTVGQ
Sbjct: 1   MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYV+RKRIKLSPEKAIFIFV N+LPPT AIMSAIYEE KDEDGFLY++YSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Cp4.1LG13g02370 vs. ExPASy Swiss-Prot
Match: A2XXR7 (Autophagy-related protein 8B OS=Oryza sativa subsp. indica OX=39946 GN=ATG8B PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 9.5e-51
Identity = 101/117 (86.32%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKS FK +H LE+R+AEA RIREKY DRIPVIVEKAERSDIP IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYV+RKRIKLSPEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Cp4.1LG13g02370 vs. ExPASy Swiss-Prot
Match: Q7XPR1 (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8B PE=3 SV=2)

HSP 1 Score: 200.7 bits (509), Expect = 9.5e-51
Identity = 101/117 (86.32%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKS FK +H LE+R+AEA RIREKY DRIPVIVEKAERSDIP IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYV+RKRIKLSPEKAIFIFV N LPPT A+MSAIYEE KDEDGFLY+TYSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Cp4.1LG13g02370 vs. NCBI nr
Match: XP_022922412.1 (autophagy-related protein 8f [Cucurbita moschata] >XP_023549494.1 autophagy-related protein 8f [Cucurbita pepo subsp. pepo] >KAG7016894.1 Autophagy-related protein 8f [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236 bits (603), Expect = 2.01e-78
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW 120
           FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW
Sbjct: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW 120

[Close]

BLAST of Cp4.1LG13g02370 vs. NCBI nr
Match: KAG6579417.1 (Autophagy-related protein 8f, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235 bits (600), Expect = 1.79e-77
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 35  MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 94

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW 120
           FVYVIR+RIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW
Sbjct: 95  FVYVIRRRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW 154

[Close]

BLAST of Cp4.1LG13g02370 vs. NCBI nr
Match: XP_022969729.1 (autophagy-related protein 8f [Cucurbita maxima])

HSP 1 Score: 233 bits (595), Expect = 3.34e-77
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW 120
           FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGF W
Sbjct: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFRW 120

[Close]

BLAST of Cp4.1LG13g02370 vs. NCBI nr
Match: XP_022154834.1 (autophagy-related protein 8f [Momordica charantia] >XP_022154835.1 autophagy-related protein 8f [Momordica charantia])

HSP 1 Score: 233 bits (593), Expect = 7.21e-77
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFG 119
           FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFG
Sbjct: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFG 119

[Close]

BLAST of Cp4.1LG13g02370 vs. NCBI nr
Match: XP_004152407.1 (autophagy-related protein 8f [Cucumis sativus] >XP_004152408.1 autophagy-related protein 8f [Cucumis sativus] >XP_008437098.1 PREDICTED: autophagy-related protein 8f [Cucumis melo] >XP_031742328.1 autophagy-related protein 8f [Cucumis sativus] >XP_038876330.1 autophagy-related protein 8f isoform X1 [Benincasa hispida] >XP_038876331.1 autophagy-related protein 8f isoform X1 [Benincasa hispida] >XP_038876332.1 autophagy-related protein 8f isoform X1 [Benincasa hispida] >KAA0039709.1 autophagy-related protein 8f [Cucumis melo var. makuwa] >KGN50246.1 hypothetical protein Csa_000352 [Cucumis sativus])

HSP 1 Score: 229 bits (583), Expect = 2.12e-75
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGF 118
           FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG+
Sbjct: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 118

[Close]

BLAST of Cp4.1LG13g02370 vs. ExPASy TrEMBL
Match: A0A6J1E365 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111430418 PE=3 SV=1)

HSP 1 Score: 236 bits (603), Expect = 9.75e-79
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW 120
           FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW
Sbjct: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW 120

[Close]

BLAST of Cp4.1LG13g02370 vs. ExPASy TrEMBL
Match: A0A6J1I3I5 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111468839 PE=3 SV=1)

HSP 1 Score: 233 bits (595), Expect = 1.62e-77
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFGW 120
           FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGF W
Sbjct: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFRW 120

[Close]

BLAST of Cp4.1LG13g02370 vs. ExPASy TrEMBL
Match: A0A6J1DKS3 (Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111021994 PE=3 SV=1)

HSP 1 Score: 233 bits (593), Expect = 3.49e-77
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFG 119
           FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFG
Sbjct: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFG 119

[Close]

BLAST of Cp4.1LG13g02370 vs. ExPASy TrEMBL
Match: A0A5A7TEP4 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00400 PE=3 SV=1)

HSP 1 Score: 229 bits (583), Expect = 1.03e-75
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGF 118
           FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG+
Sbjct: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 118

[Close]

BLAST of Cp4.1LG13g02370 vs. ExPASy TrEMBL
Match: A0A0A0KR95 (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_5G161950 PE=3 SV=1)

HSP 1 Score: 229 bits (583), Expect = 1.03e-75
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGF 118
           FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG+
Sbjct: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGW 118

[Close]

BLAST of Cp4.1LG13g02370 vs. TAIR 10
Match: AT4G16520.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-57
Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKS FKQEHDLEKR+AEAARIREKYPDRIPVIVEKAE+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFG 120
           FVYVIRKRIKLS EKAIFIFVDNVLPP GA+MS++YEEKKD+DGFLYVTYSGENTFGFG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGFG 119

[Close]

BLAST of Cp4.1LG13g02370 vs. TAIR 10
Match: AT4G16520.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-57
Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MAKS FKQEHDLEKR+AEAARIREKYPDRIPVIVEKAE+SDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGFG 120
           FVYVIRKRIKLS EKAIFIFVDNVLPP GA+MS++YEEKKD+DGFLYVTYSGENTFGFG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGFG 119

[Close]

BLAST of Cp4.1LG13g02370 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 2.3e-52
Identity = 100/117 (85.47%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MAKSYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
           MA S FK EH LEKR+AEAARIREKYPDRIPVIVE+AE+SD+P ID+KKYLVPADLTVGQ
Sbjct: 1   MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 61  FVYVIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           FVYV+RKRIKLSPEKAIFIFV N+LPPT AIMSAIYEE KDEDGFLY++YSGENTFG
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Cp4.1LG13g02370 vs. TAIR 10
Match: AT2G45170.1 (AUTOPHAGY 8E )

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-51
Identity = 96/114 (84.21%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 4   SYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVY 63
           S FK ++D EKRKAEA RIREKYPDRIPVIVEKAE+S++P+IDKKKYLVP+DLTVGQFVY
Sbjct: 5   SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64

Query: 64  VIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           VIRKRIKLS EKAIFIFVDNVLPPTG +MS++YE+KKDEDGFLY+TYSGENTFG
Sbjct: 65  VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118

[Close]

BLAST of Cp4.1LG13g02370 vs. TAIR 10
Match: AT2G45170.2 (AUTOPHAGY 8E )

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-51
Identity = 96/114 (84.21%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 4   SYFKQEHDLEKRKAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVY 63
           S FK ++D EKRKAEA RIREKYPDRIPVIVEKAE+S++P+IDKKKYLVP+DLTVGQFVY
Sbjct: 5   SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64

Query: 64  VIRKRIKLSPEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFG 118
           VIRKRIKLS EKAIFIFVDNVLPPTG +MS++YE+KKDEDGFLY+TYSGENTFG
Sbjct: 65  VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g02370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYK7	1.5e-56	91.60	Autophagy-related protein 8f OS=Arabidopsis thaliana OX=3702 GN=ATG8F PE=1 SV=1	[more]
M1C146	6.6e-52	88.03	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
Q9SL04	3.3e-51	85.47	Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1	[more]
A2XXR7	9.5e-51	86.32	Autophagy-related protein 8B OS=Oryza sativa subsp. indica OX=39946 GN=ATG8B PE=...	[more]
Q7XPR1	9.5e-51	86.32	Autophagy-related protein 8B OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8B P...	[more]

BLAST of Cp4.1LG13g02370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922412.1	2.01e-78	100.00	autophagy-related protein 8f [Cucurbita moschata] >XP_023549494.1 autophagy-rela...	[more]
KAG6579417.1	1.79e-77	99.17	Autophagy-related protein 8f, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022969729.1	3.34e-77	99.17	autophagy-related protein 8f [Cucurbita maxima]	[more]
XP_022154834.1	7.21e-77	100.00	autophagy-related protein 8f [Momordica charantia] >XP_022154835.1 autophagy-rel...	[more]
XP_004152407.1	2.12e-75	99.15	autophagy-related protein 8f [Cucumis sativus] >XP_004152408.1 autophagy-related...	[more]

BLAST of Cp4.1LG13g02370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E365	9.75e-79	100.00	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111430418 PE=3 SV=...	[more]
A0A6J1I3I5	1.62e-77	99.17	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111468839 PE=3 SV=1	[more]
A0A6J1DKS3	3.49e-77	100.00	Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111021994 PE=3 SV...	[more]
A0A5A7TEP4	1.03e-75	99.15	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A0A0KR95	1.03e-75	99.15	Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_5G161950 PE=3 SV=1	[more]

BLAST of Cp4.1LG13g02370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16520.1	1.1e-57	91.60	Ubiquitin-like superfamily protein	[more]
AT4G16520.2	1.1e-57	91.60	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	2.3e-52	85.47	Ubiquitin-like superfamily protein	[more]
AT2G45170.1	1.2e-51	84.21	AUTOPHAGY 8E	[more]
AT2G45170.2	1.2e-51	84.21	AUTOPHAGY 8E	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 1..118 e-value: 1.0E-59 score: 201.9
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 1..118
None	No IPR available	CDD	cd16128	Ubl_ATG8	coord: 12..114 e-value: 1.56065E-72 score: 209.239
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 14..117 e-value: 2.5E-51 score: 172.2
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..118
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 3..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g02370.1	Cp4.1LG13g02370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule