Cp4.1LG13g00560 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG13g00560
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
LocationCp4.1LG13: 402590 .. 405961 (+)
RNA-Seq ExpressionCp4.1LG13g00560
SyntenyCp4.1LG13g00560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAACCGATGCATTCCGGTGAAAAAACTTCTACACAAGACAATGGCGGACGGGAAGTGAGGCTCTGCAAATTTGAGCCGCGAAGTGAATTAGAGGCGAGGAAGAGAAGAGCATTTGCACGATACATTCAACCAGAGGATTCCTGCGGGACATGGAAAGCAACAGAAGAGAGGTCGTTTTCATGGAAGAAAGAGCTTAGTTTGCCGATTTGGAGGAAGAAAAAATCTGAGGAAATCCATAGCCCATCAATTCTATTGGTTCCTCTGTATTTCGTGGCCTTCATTTTTAGGTTTTGACTTTTAACCCTTTTCTCTCTTCACTTTTTTATTTATTTATTTATTATTATTATTATTTTTTTTTTTTTTTTTTGGTAATAATAAAAAAAAAGTCAATCCATTATTATTATTATTATTTTACTAAATTAATAAAAATATTCTTAATTTTGTACTTTATTTTAAAATATTAATTTAAAATGTTTCATTAATATTCTTTAATTTTAAAAAATATTTTTACCTAAATTTAAAAAATATTTATAAAATTTTAAGAGTATTATTTGACCTTTTTATATTTATAATATATATATATATATATGATAGAAATTCGTTTATAATTTTTGTTATTTCAATAATATATAAAAAAAATTATTATTATATATTATTATATAAATAATAAATATTTTTTATTTTTAACAAAATTTAAGTGTTTTTTTAAATGTTTAAAAAAAATTTAAAAATATTTTTGAAGGAGTCTAACATATTAAAAACTTTTAAAAATTAAAAGTTATTATTATTATTATTATTTTTTTTTTTTTTTTTTGTGGTTAAAATGTATTTTTTAAATAGAGTATTAGACCATCTTACCCTCGTCGTCCTGGAGGCAGCTGCTTGGACTGAAGAAGATCAGCAATCGAGAGTCGGAAGCGCAAGAACACCGAGAAGAGAAATGGCATCGGTGGTGCGGGGGATTCTGAAGTCGATCAAAGACAAAGGCATCGGTACTTTCTTGAGAGACCTCAAGGAAGAAGGCTACTTGTAATGTTTTCCTTTCCTATTTTTCGTTTTTGATCCATGGTTTCTGTCCAGTCCTTGGGAAATTTGGTGGTGTCGTCGAATTCGAATTGGAATTCGCGCCTTTTAGTTATTTTTTGCTTAATTTGTGTGATGTATTGGTGTTTCTCTTATTGTTCTGAAGATCGCTGTTTCAATGTTTAATCACTACGGGTGTTTCTTCCCCAATTTGAATGTTCGATGCCTATGGATATTGTCTCTGTTTCTCCAGCAATGTTGGAATTTGGATTGTGTTAACTGTTCTTTCTTGATTGAATCTTGCAGGAAATGCTTACCCGATGGAAACTTATTGTAAGTTCAATTTTCTATACAGTATAGAGCTTTCCTATAAAATGATTAAACTATCACCCCCTATAAGAGAACATAAAAATCATCGTTGCCTTCCTTTGCATATTGTTTGTGCTTCCATGGAGGTCTGCAGTATCCTTGGTTTCGCAATGGAGAATCATGGGTTGTGCGTACTTCTCCACCAATGCTTGTCCACAGGCAACCTGGATCTTCCCAACCATAATTTCTATTGAGAATTGTTGGGAGGGGAGTCTCACATCGGCTAATTAAGGGTTAATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGGATGAGGCATTTTGGAGAAACCAAAAGTCAAGCCATGATAGCTTAGGCTTAAAGTGGACAATATCATATCATTGTAGAGATATGTGATTCCTAACATAAATAACACCTTCAAGGGTTATAAAACACAAGAATTCAGTGATGGATAGCTATCTCAGGGTCCGTCCGCCATGCTTGATAGCTCATGGTAGTGGTTGAACAATCCATCATCTGAATCCATGACGGCCCTCCATCTTTAGGACAGAAAATATTTTAGTGCATTTGAAAGACTGCTTGGAAGAGCATCAATCTTCATTTAGGACAGAAGAGGAGCTTTTCCGCTCACTGAATTATGTTGGATTTCTTTTCAATAATTAGGTCCGAGAAGCCCCTACATCTTGGATTTCAACTATTTTAAAGGTCAAGTTGATGCCTTACAACTCCATTTTCTCTGTCAATAGTATCAGTTCAATAGAAATTTCTGTACTAGCTGTTTGACACTTAACTGAATTAACCGAGAAGATAGAGGCACATTAAAAGATTATGATGATATTCCACGAATCAACCAATTTAACTTTGTCACAAACATGCTATATATGAGTATTATATGTGACGTTGAGGTGGTAAACTTGAAAATTGTTCCTACTCTTCCTCTCTTTCGTTCAGGTTTTGTCGTCCATTGTTCGATAGGGAAACGGTAGAGGTGTTATGACTCTCCTTTCTTTATTGGGAGATCCCGAGCTTAGACGAGGGAGAAGGGATTTTTATACTTGGTGTCCTAGCCTTTCTATGGGCTTTTCTTGTAGATCTTTCTTTCACTACTTAGTGGATCCATCCCCTTCTAAGGAATCTATTTTCTCAATTCTTTGGAGTGTGAAAGTTCTAAAAAAAGGTGAAGTTCTTTGTTTGGGTGGTTAATCATAGAAGAATCAGTAACTTGGATAGCCTCTCGAGGAAGTTTCCTCCTTTGGTAGGGTTATTCTGTTACATCATTTGTCGGAGGGCGGAGGAAGATCTGAACCATTTTGTTCGGAGTTGTAACTATGCTCGTTCGGTTTGTAATTACTTCTTTGGAGTGTTTGTGTGATATCCCACATTGGTTGGGGAGGAGAATGAAACACCCTTTATAAGGGTGTGGAAATCTTTCCCTGGCAGACGCGTTTTAAAGCCCTGAAAGGGAAAGCCCAACGAGAACAATATCTGTTAGTGGTAGGCTTGGGCCGTTACAGTTTGGCCTTTAGATAGCTCAATACAGAGCTTTTTGTGATACGATCGAGGAATTCCTCCTCCATCCTTCGTTCAGGGGAAAAGAGAGTTACAGGGAAAGTTGGGATGCATGAAAGTTAGTCTTTTATAGAGAAATATATATCTATGTAGCTGTTATTTTGCTTTCCAATTGACGTCAACAATTCTTTTTTATCTCATTCATACACTGAATAATTTCCTTTCCTTGCAAACTATTCATGTGGTTTATGGGAGCTATCTTTATCATCTCTAATTTTGTTTTATTCAGGCAAACCAAAATTCACAACATCGGTGCGACACTTGTGGGTGTCGATAAGTTTGGAAATAAATATTACCAGAAGCTCGATGAACAAACTCAATATGGTATTTTTCTTTCTATTTGCTATCGGTGAAGGCCAAGATGTCTAAACCATTGCTTAAGACACTTGCCATGTTATGTTAACTCGAACCGATTGATTATGTTTCTTGCTACAGAGTGA

mRNA sequence

ATGGAGAAACCGATGCATTCCGGTGAAAAAACTTCTACACAAGACAATGGCGGACGGGAAGTGAGGCTCTGCAAATTTGAGCCGCGAAGTGAATTAGAGGCGAGGAAGAGAAGAGCATTTGCACGATACATTCAACCAGAGGATTCCTGCGGGACATGGAAAGCAACAGAAGAGAGGTCGTTTTCATGGAAGAAAGAGCTTAGTTTGCCGATTTGGAGGAAGAAAAAATCTGAGGAAATCCATAGCCCATCAATTCTATTGGTTCCTCTGTATTTCGTGGCCTTCATTTTTAGAGTATTAGACCATCTTACCCTCGTCGTCCTGGAGGCAGCTGCTTGGACTGAAGAAGATCAGCAATCGAGAGTCGGAAGCGCAAGAACACCGAGAAGAGAAATGGCATCGGTGGTGCGGGGGATTCTGAAGTCGATCAAAGACAAAGGCATCGGTACTTTCTTGAGAGACCTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGATGGAAACTTATTGCAAACCAAAATTCACAACATCGGTGCGACACTTGTGGGTGTCGATAAGTTTGGAAATAAATATTACCAGAAGCTCGATGAACAAACTCAATATGAGTGA

Coding sequence (CDS)

ATGGAGAAACCGATGCATTCCGGTGAAAAAACTTCTACACAAGACAATGGCGGACGGGAAGTGAGGCTCTGCAAATTTGAGCCGCGAAGTGAATTAGAGGCGAGGAAGAGAAGAGCATTTGCACGATACATTCAACCAGAGGATTCCTGCGGGACATGGAAAGCAACAGAAGAGAGGTCGTTTTCATGGAAGAAAGAGCTTAGTTTGCCGATTTGGAGGAAGAAAAAATCTGAGGAAATCCATAGCCCATCAATTCTATTGGTTCCTCTGTATTTCGTGGCCTTCATTTTTAGAGTATTAGACCATCTTACCCTCGTCGTCCTGGAGGCAGCTGCTTGGACTGAAGAAGATCAGCAATCGAGAGTCGGAAGCGCAAGAACACCGAGAAGAGAAATGGCATCGGTGGTGCGGGGGATTCTGAAGTCGATCAAAGACAAAGGCATCGGTACTTTCTTGAGAGACCTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGATGGAAACTTATTGCAAACCAAAATTCACAACATCGGTGCGACACTTGTGGGTGTCGATAAGTTTGGAAATAAATATTACCAGAAGCTCGATGAACAAACTCAATATGAGTGA

Protein sequence

MEKPMHSGEKTSTQDNGGREVRLCKFEPRSELEARKRRAFARYIQPEDSCGTWKATEERSFSWKKELSLPIWRKKKSEEIHSPSILLVPLYFVAFIFRVLDHLTLVVLEAAAWTEEDQQSRVGSARTPRREMASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYE
Homology
[Close]
BLAST of Cp4.1LG13g00560 vs. ExPASy Swiss-Prot
Match: Q9M9M9 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana OX=3702 GN=At3g03100 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.4e-22
Identity = 47/68 (69.12%), Postives = 61/68 (89.71%), Query Frame = 0 

Query: 134 SVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 193
           +V +  L++I++KG+G F+R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ
Sbjct: 4   TVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 63

Query: 194 KLDEQTQY 202
           KL + TQY
Sbjct: 64  KLGD-TQY 70

[Close]
BLAST of Cp4.1LG13g00560 vs. NCBI nr
Match: KAG6579673.1 (hypothetical protein SDJN03_24121, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187 bits (474), Expect = 1.12e-57
Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MEKPMHSGEKTSTQDNGGREVRLCKFEPRSELEARKRRAFARYIQPEDSCGTWKATEERS 60
          MEKP+HSGEK STQDNGGREVRLCKF PRSELEARKRRAF RYIQPE+SCGTWKATEERS
Sbjct: 1  MEKPVHSGEKASTQDNGGREVRLCKFGPRSELEARKRRAFPRYIQPENSCGTWKATEERS 60

Query: 61 FSWKKELSLPIWRKKKSEEIHSPSILLVPLYFVAFIFR 98
          FSWKKELSLPIW+KKKSEEIHSPSILLVPLYFVAFIFR
Sbjct: 61 FSWKKELSLPIWKKKKSEEIHSPSILLVPLYFVAFIFR 98

[Close]
BLAST of Cp4.1LG13g00560 vs. NCBI nr
Match: KAG6579672.1 (putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144 bits (364), Expect = 3.02e-40
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 132 MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 191
           MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 192 YQKLDEQTQY 201
           YQKLDEQTQY
Sbjct: 61  YQKLDEQTQY 70

[Close]
BLAST of Cp4.1LG13g00560 vs. NCBI nr
Match: XP_023550885.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144 bits (364), Expect = 3.40e-40
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 132 MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 191
           MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 192 YQKLDEQTQY 201
           YQKLDEQTQY
Sbjct: 61  YQKLDEQTQY 70

[Close]
BLAST of Cp4.1LG13g00560 vs. NCBI nr
Match: XP_022929152.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata])

HSP 1 Score: 144 bits (362), Expect = 6.83e-40
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 132 MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 191
           MASVVRGILKSIKDKG+GTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 192 YQKLDEQTQY 201
           YQKLDEQTQY
Sbjct: 61  YQKLDEQTQY 70

[Close]
BLAST of Cp4.1LG13g00560 vs. NCBI nr
Match: KAG7017120.1 (putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144 bits (364), Expect = 5.26e-39
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 132 MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 191
           MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 192 YQKLDEQTQY 201
           YQKLDEQTQY
Sbjct: 61  YQKLDEQTQY 70

[Close]
BLAST of Cp4.1LG13g00560 vs. ExPASy TrEMBL
Match: A0A6J1ELZ2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita moschata OX=3662 GN=LOC111435820 PE=3 SV=1)

HSP 1 Score: 144 bits (362), Expect = 3.30e-40
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 132 MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 191
           MASVVRGILKSIKDKG+GTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 192 YQKLDEQTQY 201
           YQKLDEQTQY
Sbjct: 61  YQKLDEQTQY 70

[Close]
BLAST of Cp4.1LG13g00560 vs. ExPASy TrEMBL
Match: A0A6J1HZ90 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111469006 PE=3 SV=1)

HSP 1 Score: 140 bits (353), Expect = 7.55e-39
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 132 MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 191
           MASVVRGILKSIKDKGIGTFLR+ KEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFLREFKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 192 YQKLDEQTQY 201
           YQ+LDEQTQY
Sbjct: 61  YQRLDEQTQY 70

[Close]
BLAST of Cp4.1LG13g00560 vs. ExPASy TrEMBL
Match: A0A0A0KNC9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus OX=3659 GN=Csa_5G172840 PE=3 SV=1)

HSP 1 Score: 138 bits (348), Expect = 4.29e-38
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 132 MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 191
           MASVVRGILKSIKDKGIGTF R+LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 192 YQKLDEQTQY 201
           YQK+DE+TQY
Sbjct: 61  YQKVDEETQY 70

[Close]
BLAST of Cp4.1LG13g00560 vs. ExPASy TrEMBL
Match: A0A6J1H155 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita moschata OX=3662 GN=LOC111459435 PE=3 SV=1)

HSP 1 Score: 138 bits (348), Expect = 4.29e-38
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 132 MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 191
           MASVVRGI+KSIKDKGIGTF R+LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 192 YQKLDEQTQY 201
           YQKLDE+TQY
Sbjct: 61  YQKLDEETQY 70

[Close]
BLAST of Cp4.1LG13g00560 vs. ExPASy TrEMBL
Match: A0A6J1K5W7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111491451 PE=3 SV=1)

HSP 1 Score: 136 bits (342), Expect = 3.45e-37
Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 132 MASVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 191
           MASVVRGI+KSIKDKGIGTF R+LKEEGYLKCLPDGNLLQTKIH IGATLVGVDKFGNKY
Sbjct: 1   MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHKIGATLVGVDKFGNKY 60

Query: 192 YQKLDEQTQY 201
           YQKLDE+TQY
Sbjct: 61  YQKLDEETQY 70

[Close]
BLAST of Cp4.1LG13g00560 vs. TAIR 10
Match: AT3G03100.1 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 105.9 bits (263), Expect = 3.8e-23
Identity = 47/68 (69.12%), Postives = 61/68 (89.71%), Query Frame = 0 

Query: 134 SVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 193
           +V +  L++I++KG+G F+R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ
Sbjct: 4   TVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 63

Query: 194 KLDEQTQY 202
           KL + TQY
Sbjct: 64  KLGD-TQY 70

[Close]
BLAST of Cp4.1LG13g00560 vs. TAIR 10
Match: AT3G03100.2 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 105.9 bits (263), Expect = 3.8e-23
Identity = 47/68 (69.12%), Postives = 61/68 (89.71%), Query Frame = 0 

Query: 134 SVVRGILKSIKDKGIGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 193
           +V +  L++I++KG+G F+R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ
Sbjct: 4   TVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 63

Query: 194 KLDEQTQY 202
           KL + TQY
Sbjct: 64  KLGD-TQY 70

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g00560 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M9M95.4e-2269.12Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabid... [more]
BLAST of Cp4.1LG13g00560 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579673.11.12e-5793.88hypothetical protein SDJN03_24121, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6579672.13.02e-40100.00putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, partial ... [more]
XP_023550885.13.40e-40100.00probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 isoform X... [more]
XP_022929152.16.83e-4098.57probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbit... [more]
KAG7017120.15.26e-39100.00putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, partial ... [more]
BLAST of Cp4.1LG13g00560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ELZ23.30e-4098.57NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita mosch... [more]
A0A6J1HZ907.55e-3995.71NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxim... [more]
A0A0A0KNC94.29e-3894.29NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus... [more]
A0A6J1H1554.29e-3894.29NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita mosch... [more]
A0A6J1K5W73.45e-3792.86NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxim... [more]
BLAST of Cp4.1LG13g00560 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G03100.13.8e-2369.12NADH:ubiquinone oxidoreductase, 17.2kDa subunit [more]
AT3G03100.23.8e-2369.12NADH:ubiquinone oxidoreductase, 17.2kDa subunit [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR12910:SF10NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12coord: 134..197
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PANTHERPTHR12910NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2coord: 134..197

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g00560.1Cp4.1LG13g00560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032981 mitochondrial respiratory chain complex I assembly
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0016020 membrane